Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= 1488a07
         (569 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31746549|gb|AAF39969.3| Variable abnormal morphology protein ...   293   6e-94
gi|17552208|ref|NP_498392.1| tho2 (164.4 kD) (3H463) [Caenorhabd...    34   2.1
gi|25395798|pir||G88480 protein C16A3.7 [imported] - Caenorhabdi...    34   2.1
gi|17559460|ref|NP_504825.1| PPAK motif and HMG-I and HMG-Y DNA-...    33   3.6


>gi|31746549|gb|AAF39969.3| Variable abnormal morphology protein 19
           [Caenorhabditis elegans]
 gi|33302303|gb|AAQ01772.1| VAB-19 [Caenorhabditis elegans]
          Length = 1040

 Score =  293 bits (751), Expect(2) = 6e-94
 Identities = 144/154 (93%), Positives = 145/154 (93%)
 Frame = +1

Query: 1   EPIKHCHVALGTEPTSTREVGTVPVTVRSLHIDTQTDPAASTVDAACSPVLFETQEEAVK 180
           EPIKHCHVALGTEPTSTREVGTVPVTVRSLHIDTQTDPAASTVDAACSPVLFETQEEAVK
Sbjct: 457 EPIKHCHVALGTEPTSTREVGTVPVTVRSLHIDTQTDPAASTVDAACSPVLFETQEEAVK 516

Query: 181 VTVXXXXXXXXXDCEECLKRQDVFTRNVGVGACSISDKICVSCDNQVVEADENEAPGFKT 360
           VTV         DCEECLKRQDVFTRNVGVGACSISDKICVSCDNQVVEADENEAPGFKT
Sbjct: 517 VTVAASSSAAAADCEECLKRQDVFTRNVGVGACSISDKICVSCDNQVVEADENEAPGFKT 576

Query: 361 ETKDDQKQRDFEIAKANAVKKLLTNEQKSNFQRG 462
           +TKDDQKQRDFEIAKANAVKKLLTNEQKSNFQRG
Sbjct: 577 DTKDDQKQRDFEIAKANAVKKLLTNEQKSNFQRG 610



 Score = 73.2 bits (178), Expect(2) = 6e-94
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = +2

Query: 461 GTAVSKSARYDRKRSVDDLDYIVDKKNATSPATSSQ 568
           GTAVSKSARYDRKRSVDDLDYIVDKKNATSPATSSQ
Sbjct: 610 GTAVSKSARYDRKRSVDDLDYIVDKKNATSPATSSQ 645




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