Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= 225d7
         (360 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|46091341|dbj|BAD13788.1| cag pathogenicity island protein [He...    36   0.21
gi|17562320|ref|NP_504086.1| predicted CDS, putative protein fam...    32   2.3
gi|46195882|gb|AAB94250.2| Serpentine receptor, class x protein ...    32   2.3
gi|17158389|ref|NP_477808.1| wsv286 [shrimp white spot syndrome ...    32   3.0
gi|27380191|ref|NP_771720.1| AcrB/AcrD/AcrF family protein [Brad...    32   4.0
gi|23509035|ref|NP_701703.1| hypothetical protein [Plasmodium fa...    32   4.0
gi|33944365|ref|XP_340330.1| hypothetical protein Tb927.2.2320 [...    32   4.0
gi|34535449|dbj|BAC87320.1| unnamed protein product [Homo sapiens]     32   4.0
gi|23481950|gb|EAA18081.1| hypothetical protein [Plasmodium yoel...    31   5.2
gi|49131946|ref|XP_413067.1| hypothetical protein AN8930.2 [Aspe...    31   5.2
gi|23612384|ref|NP_703964.1| hypothetical protein [Plasmodium fa...    31   6.8
gi|47216847|emb|CAG11654.1| unnamed protein product [Tetraodon n...    31   6.8
gi|23491250|gb|EAA22833.1| hypothetical protein [Plasmodium yoel...    30   8.8
gi|13959401|sp|Q9ZHG0|IM92_KLEPN Microcin E492 immunity protein ...    30   8.8
gi|17540826|ref|NP_500068.1| putative protein family member (4C1...    30   8.8


>gi|46091341|dbj|BAD13788.1| cag pathogenicity island protein
           [Helicobacter pylori]
          Length = 114

 Score = 35.8 bits (81), Expect = 0.21
 Identities = 21/76 (27%), Positives = 40/76 (52%)
 Frame = +3

Query: 111 SKHFLGRSKPLNVQSVSTLSLQFLFANFSPTNCILVQYAQFFFFIFIVPLPSFFSFPRHA 290
           +KH    S    + ++S++ + FL   FS    +++ Y   F F  I+  PSFF +  +
Sbjct: 20  NKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPILFLFALIIK-PSFFYYTTYL 78

Query: 291 LISVTMRFLSSFSILN 338
           L+ V++  +S + +LN
Sbjct: 79  LLLVSLSVISKYYLLN 94




[DB home][top]