Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= 316g8
         (360 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17535385|ref|NP_496343.1| PaTched Related (ptr-8) [Caenorhabd...   161   3e-39
gi|39591183|emb|CAE73236.1| Hypothetical protein CBG20645 [Caeno...   147   6e-35
gi|48060436|gb|AAF39911.3| Patched related family protein 12 [Ca...    60   8e-09
gi|25143167|ref|NP_491005.2| PaTched Related (ptr-12) [Caenorhab...    60   8e-09
gi|39584430|emb|CAE72568.1| Hypothetical protein CBG19753 [Caeno...    60   1e-08
gi|17508527|ref|NP_493603.1| PaTched Related (111.8 kD) (ptr-23)...    60   1e-08
gi|39595501|emb|CAE60539.1| Hypothetical protein CBG04166 [Caeno...    58   5e-08
gi|39586853|emb|CAE62788.1| Hypothetical protein CBG06961 [Caeno...    57   7e-08
gi|7497280|pir||T28706 hypothetical protein C41D7.2 - Caenorhabd...    56   2e-07
gi|17535381|ref|NP_493718.1| PaTched Related (ptr-3) [Caenorhabd...    56   2e-07
gi|39581855|emb|CAE60748.1| Hypothetical protein CBG04434 [Caeno...    55   3e-07
gi|39588499|emb|CAE58022.1| Hypothetical protein CBG01094 [Caeno...    55   4e-07
gi|17541728|ref|NP_501963.1| PaTched Related (ptr-14) [Caenorhab...    55   4e-07
gi|17562812|ref|NP_503388.1| PaTched Related (ptr-16) [Caenorhab...    54   7e-07
gi|39596050|emb|CAE69686.1| Hypothetical protein CBG15941 [Caeno...    54   1e-06
gi|25147623|ref|NP_510810.2| PaTched Related (ptr-5) [Caenorhabd...    54   1e-06
gi|31746661|gb|AAB42308.4| Patched related family protein 5 [Cae...    54   1e-06
gi|7497872|pir||T25657 hypothetical protein C53C11.3 - Caenorhab...    54   1e-06
gi|39585870|emb|CAE61284.1| Hypothetical protein CBG05104 [Caeno...    50   8e-06
gi|17508519|ref|NP_490687.1| PaTched Related (90.7 kD) (ptr-11) ...    50   8e-06
gi|17535387|ref|NP_496392.1| PaTched Related (ptr-13) [Caenorhab...    50   1e-05
gi|17508525|ref|NP_490751.1| PaTched Related (ptr-21) [Caenorhab...    50   1e-05
gi|39597328|emb|CAE59556.1| Hypothetical protein CBG02953 [Caeno...    49   2e-05
gi|39585878|emb|CAE61292.1| Hypothetical protein CBG05116 [Caeno...    48   5e-05
gi|39586255|emb|CAE66666.1| Hypothetical protein CBG12004 [Caeno...    47   7e-05
gi|17562814|ref|NP_507690.1| PaTched Related (ptr-22) [Caenorhab...    47   9e-05
gi|17508515|ref|NP_491221.1| PaTched Related (104.4 kD) (ptr-2) ...    47   1e-04
gi|39580224|emb|CAE72980.1| Hypothetical protein CBG20322 [Caeno...    46   2e-04
gi|38422462|emb|CAA21636.2| Hypothetical protein Y38F1A.3 [Caeno...    45   3e-04
gi|17535389|ref|NP_496761.1| PaTched Related (90.8 kD) (ptr-18) ...    45   3e-04
gi|39597175|emb|CAE59402.1| Hypothetical protein CBG02766 [Caeno...    44   6e-04
gi|39594397|emb|CAE71975.1| Hypothetical protein CBG19049 [Caeno...    44   0.001
gi|17562810|ref|NP_504760.1| PaTched Related (ptr-15) [Caenorhab...    43   0.001
gi|7504317|pir||T29590 hypothetical protein F55F8.1 - Caenorhabd...    43   0.002
gi|39598248|emb|CAE68940.1| Hypothetical protein CBG14920 [Caeno...    43   0.002
gi|50058060|gb|AAB37812.3| Patched related family protein 10 [Ca...    43   0.002
gi|17508517|ref|NP_491658.1| PaTched Related (ptr-10) [Caenorhab...    43   0.002
gi|17535391|ref|NP_497114.1| PaTched Related (ptr-20) [Caenorhab...    42   0.003
gi|39597497|emb|CAE59727.1| Hypothetical protein CBG03163 [Caeno...    41   0.005
gi|39594547|emb|CAE72125.1| Hypothetical protein CBG19221 [Caeno...    40   0.011
gi|17554416|ref|NP_499380.1| PaTched Related (ptr-19) [Caenorhab...    40   0.015
gi|17535373|ref|NP_495662.1| patched family member (ptc-1) [Caen...    39   0.019
gi|39591824|emb|CAE71402.1| Hypothetical protein CBG18310 [Caeno...    39   0.025
gi|39597594|emb|CAE59824.1| Hypothetical protein CBG03294 [Caeno...    39   0.032
gi|17562808|ref|NP_505380.1| PaTched Related (ptr-1) [Caenorhabd...    39   0.032
gi|50732655|ref|XP_425978.1| PREDICTED: similar to CG11212-PA [G...    38   0.042
gi|39596845|emb|CAE59072.1| Hypothetical protein CBG02358 [Caeno...    38   0.042
gi|17535383|ref|NP_494986.1| PaTched Related (ptr-6) [Caenorhabd...    37   0.094
gi|45550365|ref|NP_610209.2| CG11212-PA [Drosophila melanogaster...    37   0.094
gi|48140454|ref|XP_397117.1| similar to CG11212-PA [Apis mellifera]    37   0.12
gi|39596623|emb|CAE63242.1| Hypothetical protein CBG07607 [Caeno...    35   0.36
gi|25147620|ref|NP_509013.2| PaTched Related (110.8 kD) (ptr-4) ...    35   0.47
gi|39592388|emb|CAE63465.1| Hypothetical protein CBG07932 [Caeno...    33   1.4
gi|37182233|gb|AAQ88919.1| Patched 2 [Homo sapiens]                    33   1.8
gi|4325111|gb|AAD17260.1| patched 2 [Homo sapiens]                     33   1.8
gi|3929235|gb|AAC79847.1| receptor protein patched 2 [Homo sapie...    33   1.8
gi|22538486|ref|NP_003729.2| patched 2; patched (Drosophila) hom...    33   1.8
gi|4588015|gb|AAD25953.1| patched 2 [Homo sapiens]                     33   1.8
gi|12643356|sp|Q9Y6C5|PTC2_HUMAN Patched protein homolog 2 (PTC2...    33   1.8
gi|6679517|ref|NP_032984.1| patched homolog 2 [Mus musculus] >gn...    32   2.3
gi|11463863|dbj|BAB18575.1| patched-2 [Xenopus laevis]                 32   3.0
gi|47506910|gb|AAH70995.1| Unknown (protein for MGC:79874) [Xeno...    32   3.0
gi|46227691|gb|EAK88611.1| putative patched family protein with ...    32   3.0
gi|47213733|emb|CAF96094.1| unnamed protein product [Tetraodon n...    32   3.0
gi|49069812|ref|XP_399195.1| hypothetical protein UM01580.1 [Ust...    32   4.0
gi|27379568|ref|NP_771097.1| AcrB/AcrD/AcrF family protein [Brad...    32   4.0
gi|49256076|gb|AAH74151.1| Unknown (protein for MGC:81895) [Xeno...    31   5.2
gi|39935640|ref|NP_947916.1| possible RND efflux transporter [Rh...    31   6.8
gi|42560708|ref|NP_975159.1| cardiolipin synthetase [Mycoplasma ...    31   6.8
gi|45683104|ref|ZP_00194538.1| COG0404: Glycine cleavage system ...    31   6.8
gi|34580835|ref|ZP_00142315.1| acriflavin resistance protein D [...    30   8.8
gi|49523253|gb|AAH75388.1| Unknown (protein for MGC:89118) [Xeno...    30   8.8
gi|46228654|gb|EAK89524.1| niemann-Pick type C1 disease protein/...    30   8.8


>gi|17535385|ref|NP_496343.1| PaTched Related (ptr-8) [Caenorhabditis
            elegans]
 gi|7503404|pir||T22186 hypothetical protein F44F4.4 - Caenorhabditis
            elegans
 gi|3877059|emb|CAA85455.1| Hypothetical protein F44F4.4
            [Caenorhabditis elegans]
          Length = 890

 Score =  161 bits (408), Expect = 3e-39
 Identities = 80/81 (98%), Positives = 80/81 (98%)
 Frame = -1

Query: 318  FETNLNFALSSVGFPVIQAGVSTDFCALPLGFMELYMAKMFALSXTLCVSLSLIHGLIVI 139
            FETNLNFALSSVGFPVIQAGVSTDFCALPLGFMELYMAKMFALS TLCVSLSLIHGLIVI
Sbjct: 810  FETNLNFALSSVGFPVIQAGVSTDFCALPLGFMELYMAKMFALSLTLCVSLSLIHGLIVI 869

Query: 138  PALLSVQHHIVHAVKRCFGRN 76
            PALLSVQHHIVHAVKRCFGRN
Sbjct: 870  PALLSVQHHIVHAVKRCFGRN 890




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