Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= B0034_3
         (504 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13592289|gb|AAK31388.1| Hypothetical protein B0034.3b [Caenor...   201   7e-51
gi|17531209|ref|NP_495189.1| CaDHerin family member, calsyntenin...   195   4e-49
gi|7494722|pir||T29037 hypothetical protein B0034.3 - Caenorhabd...   195   4e-49
gi|39597001|emb|CAE59228.1| Hypothetical protein CBG02547 [Caeno...   194   7e-49
gi|47228807|emb|CAG07539.1| unnamed protein product [Tetraodon n...    34   1.5
gi|40788983|dbj|BAA74934.2| KIAA0911 protein [Homo sapiens]            33   2.6
gi|23396490|sp|O94985|CLS1_HUMAN Calsyntenin-1 precursor               33   2.6
gi|21706696|gb|AAH33902.1| CLSTN1 protein [Homo sapiens]               33   2.6
gi|34872485|ref|XP_243040.2| similar to calsyntenin-1 protein [R...    32   4.4
gi|50752056|ref|XP_422633.1| PREDICTED: similar to calsyntenin-2...    32   5.7
gi|17864184|ref|NP_524632.1| CG11059-PA [Drosophila melanogaster...    32   7.5
gi|12746426|ref|NP_075538.1| calsyntenin 1; calsyntenin-1 [Mus m...    32   7.5
gi|50759287|ref|XP_417603.1| PREDICTED: similar to calsyntenin-1...    32   7.5
gi|50510703|dbj|BAD32337.1| mKIAA0911 protein [Mus musculus]           32   7.5
gi|11558248|emb|CAC17757.1| calsyntenin-1 protein [Gallus gallus]      32   7.5
gi|41281561|ref|NP_055759.2| calsyntenin 1 [Homo sapiens] >gnl|B...    32   7.5
gi|20809867|gb|AAH29027.1| Clstn1 protein [Mus musculus]               32   7.5
gi|31753169|gb|AAH53843.1| Clstn1 protein [Mus musculus]               32   7.5
gi|45680896|gb|AAS75317.1| calsynthenin [Rattus norvegicus]            32   7.5
gi|47195769|emb|CAF87555.1| unnamed protein product [Tetraodon n...    31   9.8


>gi|13592289|gb|AAK31388.1| Hypothetical protein B0034.3b
           [Caenorhabditis elegans]
          Length = 167

 Score =  201 bits (510), Expect = 7e-51
 Identities = 108/167 (64%), Positives = 108/167 (64%)
 Frame = -1

Query: 504 MFVNILEMDLPRPKALLSHHGYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKMRDTP 325
           MFVNILEMDLPRPKALLSHHGYD                              LKMRDTP
Sbjct: 1   MFVNILEMDLPRPKALLSHHGYDVGQGAIAGGAVAVVVVVCVGFLLVLLVIGVLKMRDTP 60

Query: 324 MPRRRRQKRQSDGGMHWDDSGMNITVNPLDDVEKNGGAIXXXXXXXXXXXXXXXXXXSYR 145
           MPRRRRQKRQSDGGMHWDDSGMNITVNPLDDVEKNGGAI                  SYR
Sbjct: 61  MPRRRRQKRQSDGGMHWDDSGMNITVNPLDDVEKNGGAIDEFSDEEEEEETDGESECSYR 120

Query: 144 XXXXXXXXXXXDQTEVLPHLDANQRVVGGLEWDDEDAISTNARSYRV 4
                      DQTEVLPHLDANQRVVGGLEWDDEDAISTNARSYRV
Sbjct: 121 DEEDDVSEDEEDQTEVLPHLDANQRVVGGLEWDDEDAISTNARSYRV 167




[DB home][top]