Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= B0041_2
(1038 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17508669|ref|NP_491416.1| ribosomal Protein, Large subunit (3... 686 0.0
gi|39589455|emb|CAE74484.1| Hypothetical protein CBG22235 [Caeno... 674 0.0
gi|48098487|ref|XP_392071.1| similar to CG5502-PA [Apis mellifera] 432 e-120
gi|31207397|ref|XP_312665.1| ENSANGP00000020662 [Anopheles gambi... 429 e-119
gi|1350686|sp|P49165|RL4_URECA 60S ribosomal protein L4 (L1) >gn... 424 e-117
gi|37779080|gb|AAP20200.1| ribosomal protein L4 [Pagrus major] 417 e-115
gi|50753244|ref|XP_413921.1| PREDICTED: similar to ribosomal pro... 417 e-115
gi|24650747|ref|NP_524538.2| CG5502-PA [Drosophila melanogaster]... 416 e-115
gi|132748|sp|P09180|RL4_DROME 60S ribosomal protein L4 (L1) >gnl... 415 e-115
gi|71066|pir||R5XL1A ribosomal protein XL1a - African clawed fro... 415 e-114
gi|132743|sp|P08429|RL4A_XENLA 60S ribosomal protein L4A (L1A) >... 415 e-114
gi|11968086|ref|NP_071955.1| ribosomal protein L4 [Rattus norveg... 414 e-114
gi|39645153|gb|AAH63811.1| Ribosomal protein L4 [Rattus norvegicus] 413 e-114
gi|16579885|ref|NP_000959.2| ribosomal protein L4; 60S ribosomal... 413 e-114
gi|132745|sp|P02385|RL4B_XENLA 60S ribosomal protein L4B (L1B) >... 413 e-114
gi|1363989|pir||JC4277 ribosomal protein L4, cytosolic [validate... 413 e-114
gi|27694877|gb|AAH41744.1| MGC64318 protein [Xenopus laevis] 413 e-114
gi|12846949|dbj|BAB27375.1| unnamed protein product [Mus musculus] 413 e-114
gi|32822849|gb|AAH54956.1| MGC64318 protein [Xenopus laevis] 413 e-114
gi|30794450|ref|NP_077174.1| ribosomal protein L4 [Mus musculus]... 412 e-114
gi|313756|emb|CAA29796.1| L1a protein [Xenopus laevis] 411 e-113
gi|15293869|gb|AAK95127.1| ribosomal protein L4 [Ictalurus punct... 407 e-112
gi|7440597|pir||T09551 ribosomal protein L4 - human >gnl|BL_ORD_... 404 e-111
gi|29436531|gb|AAH49520.1| Rpl4 protein [Danio rerio] >gnl|BL_OR... 403 e-111
gi|2500343|sp|Q28346|RL4_CANFA 60S ribosomal protein L4 (L1) >gn... 398 e-109
gi|34868308|ref|XP_213105.2| similar to ribosomal protein L4, cy... 396 e-109
gi|19113302|ref|NP_596510.1| 60s ribosomal protein l2 [Schizosac... 388 e-106
gi|19112671|ref|NP_595879.1| 60s ribosomal protein l2 [Schizosac... 383 e-105
gi|542225|pir||S41640 ribosomal protein L4.e - fission yeast (Sc... 373 e-102
gi|312177|emb|CAA51666.1| ribosomal protein L2 [Schizosaccharomy... 370 e-101
gi|44966650|gb|AAS49558.1| ribosomal protein L4 [Latimeria chalu... 366 e-100
gi|44968095|gb|AAS49583.1| ribosomal protein L4 [Gallus gallus] 364 2e-99
gi|34897236|ref|NP_909964.1| putative 60S ribosomal protein L1 [... 362 8e-99
gi|17367847|sp|Q9XF97|RL4_PRUAR 60S ribosomal protein L4 (L1) >g... 362 1e-98
gi|26450328|dbj|BAC42280.1| putative 60S ribosomal protein [Arab... 361 2e-98
gi|15242558|ref|NP_195907.1| 60S ribosomal protein L4/L1 (RPL4D)... 361 2e-98
gi|50285453|ref|XP_445155.1| unnamed protein product [Candida gl... 360 3e-98
gi|15232723|ref|NP_187574.1| 60S ribosomal protein L4/L1 (RPL4A)... 360 4e-98
gi|28828239|gb|AAO50916.1| similar to Arabidopsis thaliana (Mous... 360 4e-98
gi|50255781|gb|EAL18513.1| hypothetical protein CNBJ1550 [Crypto... 355 9e-97
gi|50411126|ref|XP_457019.1| unnamed protein product [Debaryomyc... 355 9e-97
gi|21593543|gb|AAM65510.1| 60S ribosomal protein L4-B (L1) [Arab... 355 1e-96
gi|34393487|dbj|BAC83047.1| putative 60S ribosomal protein L4/L1... 353 4e-96
gi|45185016|ref|NP_982734.1| AAR191Cp [Eremothecium gossypii] >g... 352 6e-96
gi|6319505|ref|NP_009587.1| N-terminally acetylated protein comp... 352 8e-96
gi|6320215|ref|NP_010295.1| Protein component of the large (60S)... 352 8e-96
gi|49258842|pdb|1S1I|D Chain D, Structure Of The Ribosomal 80s-E... 352 8e-96
gi|50303803|ref|XP_451848.1| unnamed protein product [Kluyveromy... 352 1e-95
gi|46436620|gb|EAK95979.1| hypothetical protein CaO19.7217 [Cand... 350 3e-95
gi|50548125|ref|XP_501532.1| hypothetical protein [Yarrowia lipo... 348 1e-94
gi|1350685|sp|P49669|RL4_TRYBB 60S ribosomal protein L4 (L1) >gn... 347 2e-94
gi|172413|gb|AAA34974.1| ribosomal protein L2 345 1e-93
gi|49119836|ref|XP_412313.1| hypothetical protein AN8176.2 [Aspe... 344 2e-93
gi|47225873|emb|CAF98353.1| unnamed protein product [Tetraodon n... 343 3e-93
gi|23482400|gb|EAA18392.1| ribosomal protein L4/L1 family, putat... 338 1e-91
gi|23613094|ref|NP_703416.1| 60S ribosomal subunit protein L4/L1... 335 1e-90
gi|46125617|ref|XP_387362.1| hypothetical protein FG07186.1 [Gib... 335 1e-90
gi|38111681|gb|EAA57221.1| hypothetical protein MG08190.4 [Magna... 329 7e-89
gi|49072448|ref|XP_400513.1| hypothetical protein UM02898.1 [Ust... 328 1e-88
gi|6441068|dbj|BAA78600.1| 60S ribosomal protein L4 [Chlamydomon... 328 2e-88
gi|32404892|ref|XP_323059.1| hypothetical protein [Neurospora cr... 327 2e-88
gi|32398896|emb|CAD98361.1| 60S ribosomal protein-like, probable... 317 2e-85
gi|22203722|gb|AAM94273.1| ribosomal protein L4 [Chlamys farreri] 285 2e-75
gi|26376612|dbj|BAB28234.2| unnamed protein product [Mus musculus] 282 8e-75
gi|22758862|gb|AAN05590.1| ribosomal protein L4 [Argopecten irra... 270 4e-71
gi|41148957|ref|XP_034640.3| similar to ribosomal protein L4; 60... 263 4e-69
gi|19173410|ref|NP_597213.1| 60S RIBOSOMAL PROTEIN L4 [Encephali... 261 2e-68
gi|13605831|gb|AAK32901.1| AT5g02870/F9G14_180 [Arabidopsis thal... 255 1e-66
gi|29249381|gb|EAA40894.1| GLP_79_45017_44067 [Giardia lamblia A... 252 1e-65
gi|553139|gb|AAA34975.1| ribosomal protein L2 228 2e-58
gi|13812037|ref|NP_113168.1| 60s ribosomal protein L1 [Guillardi... 221 3e-56
gi|1335649|emb|CAA29998.1| unnamed protein product [Drosophila m... 201 2e-50
gi|38047527|gb|AAR09666.1| similar to Drosophila melanogaster Rp... 194 3e-48
gi|14595075|emb|CAC43331.1| putative ribosomal protein L4 [Oncor... 187 3e-46
gi|15558919|dbj|BAB64925.1| ribosomal protein L4 [Paramecium cau... 174 3e-42
gi|15678034|ref|NP_275148.1| ribosomal protein L4 (E.coli L4) [M... 173 7e-42
gi|14716980|emb|CAC44155.1| putative ribosomal protein L4B prote... 170 4e-41
gi|18313002|ref|NP_559669.1| ribosomal protein L4 [Pyrobaculum a... 170 6e-41
gi|21228227|ref|NP_634149.1| LSU ribosomal protein L4 [Methanosa... 169 1e-40
gi|20093852|ref|NP_613699.1| Ribosomal protein L4 [Methanopyrus ... 168 2e-40
gi|20089943|ref|NP_616018.1| ribosomal protein L4 [Methanosarcin... 166 6e-40
gi|14520557|ref|NP_126032.1| LSU ribosomal protein L4P [Pyrococc... 166 6e-40
gi|18978196|ref|NP_579553.1| LSU ribosomal protein L4P [Pyrococc... 166 8e-40
gi|14591534|ref|NP_143616.1| 50S ribosomal protein L4 [Pyrococcu... 166 1e-39
gi|48838684|ref|ZP_00295624.1| COG0088: Ribosomal protein L4 [Me... 164 2e-39
gi|15897622|ref|NP_342227.1| LSU ribosomal protein L4AE (rpl4AE)... 163 7e-39
gi|46141874|ref|ZP_00204064.1| COG0088: Ribosomal protein L4 [Me... 162 9e-39
gi|11499508|ref|NP_070749.1| LSU ribosomal protein L4P (rpl4P) [... 159 1e-37
gi|45359107|ref|NP_988664.1| LSU Ribosomal protein L4P [Methanoc... 147 4e-34
gi|15668349|ref|NP_247145.1| LSU ribosomal protein L4P (rplD) [M... 142 1e-32
gi|15790633|ref|NP_280457.1| 50S ribosomal protein L4E; Rpl4e [H... 142 2e-32
gi|15920640|ref|NP_376309.1| 269aa long hypothetical 50S ribosom... 137 3e-31
gi|46396651|sp|Q975I2|RL4_SULTO 50S ribosomal protein L4P 137 3e-31
gi|46397797|sp|Q9YFM1|RL4_AERPE 50S ribosomal protein L4P 134 3e-30
gi|14600546|ref|NP_147063.1| 50S ribosomal protein L4 [Aeropyrum... 134 3e-30
gi|46397660|sp||O15594_1 [Segment 1 of 2] 60S ribosomal protein ... 132 1e-29
gi|16082269|ref|NP_394727.1| probable 50S ribosomal protein L4 [... 132 1e-29
gi|13541156|ref|NP_110844.1| 50S ribosomal protein L4 [Thermopla... 131 3e-29
gi|41614941|ref|NP_963439.1| NEQ146 [Nanoarchaeum equitans Kin4-... 128 2e-28
gi|10120922|pdb|1FFK|C Chain C, Crystal Structure Of The Large R... 126 7e-28
gi|71069|pir||R5HS6H ribosomal protein L4.eR [validated] - Haloa... 126 7e-28
gi|13432201|sp|P12735|RL4_HALMA 50S ribosomal protein L4P (Hmal4... 126 7e-28
gi|48852525|ref|ZP_00306711.1| COG0088: Ribosomal protein L4 [Fe... 125 1e-27
gi|548772|sp|Q06845|RL4_HALSA 50S ribosomal protein L4P >gnl|BL_... 125 2e-27
gi|48477713|ref|YP_023419.1| large subunit ribosomal protein L1E... 124 3e-27
gi|46397661|sp||O15594_2 [Segment 2 of 2] 60S ribosomal protein ... 122 1e-26
gi|132759|sp|P14117|RL4_XENTR 60S ribosomal protein L4 (L1) >gnl... 97 5e-19
gi|34869382|ref|XP_223835.2| similar to ribosomal protein L4 [Ra... 91 3e-17
gi|6322209|ref|NP_012284.1| GPI-anchored cell surface glycoprote... 50 8e-05
gi|65045|emb|CAA24699.1| ribosomal protein L1 [Xenopus laevis] 46 0.002
gi|6324372|ref|NP_014442.1| Anchorage subunit of a-agglutinin of... 41 0.039
gi|19113482|ref|NP_596690.1| hypothetical serine-rich secreted p... 39 0.20
gi|38101637|gb|EAA48569.1| hypothetical protein MG00227.4 [Magna... 39 0.26
gi|34880471|ref|XP_213903.2| similar to This gene is isolated by... 39 0.26
gi|49487433|ref|YP_044654.1| putative cell wall-anchored protein... 38 0.33
gi|21284304|ref|NP_647392.1| ORFID:MW2575~hypothetical protein, ... 38 0.33
gi|50306211|ref|XP_453068.1| unnamed protein product [Kluyveromy... 38 0.44
gi|21751020|dbj|BAC03887.1| unnamed protein product [Homo sapiens] 37 0.74
gi|34897912|ref|NP_910302.1| hypothetical protein [Oryza sativa ... 37 0.74
gi|37676835|ref|NP_937231.1| conserved hypothetical protein [Vib... 37 0.74
gi|47214083|emb|CAF95340.1| unnamed protein product [Tetraodon n... 36 1.3
gi|46435796|gb|EAK95170.1| hypothetical protein CaO19.4072 [Cand... 36 1.7
gi|46435639|gb|EAK95016.1| hypothetical protein CaO19.11553 [Can... 36 1.7
gi|47214722|emb|CAG01075.1| unnamed protein product [Tetraodon n... 35 2.2
gi|19115307|ref|NP_594395.1| hypothetical serine-rich protein. [... 35 2.2
gi|32491281|ref|NP_871535.1| ygbP [Wigglesworthia glossinidia en... 35 2.2
gi|1749842|emb|CAB02634.1| cell wall protein [Yarrowia lipolytica] 35 2.2
gi|21233380|ref|NP_639297.1| conserved hypothetical protein [Xan... 35 2.8
gi|38103378|gb|EAA50078.1| hypothetical protein MG03837.4 [Magna... 35 2.8
gi|39595809|emb|CAE67312.1| Hypothetical protein CBG12769 [Caeno... 35 3.7
gi|172096|gb|AAA34841.1| polyA nuclease 35 3.7
gi|34869921|ref|XP_233240.2| similar to RIKEN cDNA 3110007P09 [R... 35 3.7
gi|27694612|gb|AAH43743.1| Atp1a3-prov protein [Xenopus laevis] 34 4.8
gi|32410655|ref|XP_325808.1| predicted protein [Neurospora crass... 34 4.8
gi|11359241|pir||T40642 probable helicase - fission yeast (Schiz... 34 4.8
gi|15925239|ref|NP_372773.1| 50S ribosomal protein L4 [Staphyloc... 34 4.8
gi|49484465|ref|YP_041689.1| 50S ribosomal protein L4 [Staphyloc... 34 4.8
gi|2894276|emb|CAA17044.1| SPBC1826.01c [Schizosaccharomyces pombe] 34 4.8
gi|17549481|ref|NP_522821.1| HYPOTHETICAL PROTEIN RS05307 [Ralst... 34 6.3
gi|39937247|ref|NP_949523.1| two component sigma-54-dependent tr... 34 6.3
gi|3309543|gb|AAC41377.1| MLL [Takifugu rubripes] 33 8.2
gi|1657268|emb|CAA68964.1| aminopeptidase [Homo sapiens] 33 8.2
gi|40850943|gb|AAH65294.1| Unknown (protein for IMAGE:6059589) [... 33 8.2
gi|15451907|ref|NP_006301.2| aminopeptidase puromycin sensitive;... 33 8.2
gi|49085440|ref|XP_404842.1| conserved hypothetical protein [Asp... 33 8.2
gi|46139983|ref|XP_391682.1| hypothetical protein FG11506.1 [Gib... 33 8.2
gi|6679491|ref|NP_032968.1| puromycin-sensitive aminopeptidase [... 33 8.2
gi|16307131|gb|AAH09653.1| Puromycin-sensitive aminopeptidase [M... 33 8.2
gi|34873499|ref|XP_340890.1| puromycin-sensitive aminopeptidase ... 33 8.2
gi|2499902|sp|P55786|PSA_HUMAN Puromycin-sensitive aminopeptidas... 33 8.2
gi|27468741|ref|NP_765378.1| 50S ribosomal protein L4 [Staphyloc... 33 8.2
gi|5777623|emb|CAB53484.1| CAA303711.1 protein [Oryza sativa] 33 8.2
gi|50729514|ref|XP_416543.1| PREDICTED: similar to KIAA2018 prot... 33 8.2
gi|32477034|ref|NP_870028.1| hypothetical protein-signal peptide... 33 8.2
>gi|17508669|ref|NP_491416.1| ribosomal Protein, Large subunit (38.7
kD) (rpl-4) [Caenorhabditis elegans]
gi|3914700|sp|O02056|RL4_CAEEL 60S ribosomal protein L4
gi|7494740|pir||T34031 hypothetical protein B0041.4 - Caenorhabditis
elegans
gi|1947110|gb|AAC24253.1| Ribosomal protein, large subunit protein 4
[Caenorhabditis elegans]
Length = 345
Score = 686 bits (1771), Expect = 0.0
Identities = 345/345 (100%), Positives = 345/345 (100%)
Frame = -1
Query: 1038 MAARPLVTVYDEKYEATQSQIRLPAVFRTPIRPDLVSFIADQVRRNRRQAHAVNTKAGKQ 859
MAARPLVTVYDEKYEATQSQIRLPAVFRTPIRPDLVSFIADQVRRNRRQAHAVNTKAGKQ
Sbjct: 1 MAARPLVTVYDEKYEATQSQIRLPAVFRTPIRPDLVSFIADQVRRNRRQAHAVNTKAGKQ 60
Query: 858 HSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGHMFAPLKVFRRWHRNVNIAQKR 679
HSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGHMFAPLKVFRRWHRNVNIAQKR
Sbjct: 61 HSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGHMFAPLKVFRRWHRNVNIAQKR 120
Query: 678 YAVSSAIAASGIPALLQARGHVIDQVAEVPLVVSDKVESFRKTKEAVVFLRRSHLWADIE 499
YAVSSAIAASGIPALLQARGHVIDQVAEVPLVVSDKVESFRKTKEAVVFLRRSHLWADIE
Sbjct: 121 YAVSSAIAASGIPALLQARGHVIDQVAEVPLVVSDKVESFRKTKEAVVFLRRSHLWADIE 180
Query: 498 KVYNSKRNRAGKGKLRNRQHKQKLGPVVIYGQDAECARAFRNIPGVDVMNVERLNLLKLA 319
KVYNSKRNRAGKGKLRNRQHKQKLGPVVIYGQDAECARAFRNIPGVDVMNVERLNLLKLA
Sbjct: 181 KVYNSKRNRAGKGKLRNRQHKQKLGPVVIYGQDAECARAFRNIPGVDVMNVERLNLLKLA 240
Query: 318 PGGHLGRLIIWTESAFKKLDTIYGTTVANSSQLKKGWSVPLPIMANSDFSRIIRSEEVVK 139
PGGHLGRLIIWTESAFKKLDTIYGTTVANSSQLKKGWSVPLPIMANSDFSRIIRSEEVVK
Sbjct: 241 PGGHLGRLIIWTESAFKKLDTIYGTTVANSSQLKKGWSVPLPIMANSDFSRIIRSEEVVK 300
Query: 138 AIRAPKKNPVLPKVHRNPLKKRTLLYKLNPYASILRKASKANVKK 4
AIRAPKKNPVLPKVHRNPLKKRTLLYKLNPYASILRKASKANVKK
Sbjct: 301 AIRAPKKNPVLPKVHRNPLKKRTLLYKLNPYASILRKASKANVKK 345
>gi|39589455|emb|CAE74484.1| Hypothetical protein CBG22235
[Caenorhabditis briggsae]
Length = 345
Score = 674 bits (1739), Expect = 0.0
Identities = 335/345 (97%), Positives = 342/345 (99%)
Frame = -1
Query: 1038 MAARPLVTVYDEKYEATQSQIRLPAVFRTPIRPDLVSFIADQVRRNRRQAHAVNTKAGKQ 859
MAARPLVTVYDEKYEATQSQIRLPAVFRTPIRPDLVSFIADQVRRN+RQAHAVNTKAGKQ
Sbjct: 1 MAARPLVTVYDEKYEATQSQIRLPAVFRTPIRPDLVSFIADQVRRNKRQAHAVNTKAGKQ 60
Query: 858 HSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGHMFAPLKVFRRWHRNVNIAQKR 679
HSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGHMFAPLKVFRRWHRNVNIAQKR
Sbjct: 61 HSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGHMFAPLKVFRRWHRNVNIAQKR 120
Query: 678 YAVSSAIAASGIPALLQARGHVIDQVAEVPLVVSDKVESFRKTKEAVVFLRRSHLWADIE 499
YAVSSAIAASGIPALLQARGHVIDQVAEVPLVVSDK+ESFRKTKEAV FLRRSHLWADIE
Sbjct: 121 YAVSSAIAASGIPALLQARGHVIDQVAEVPLVVSDKIESFRKTKEAVTFLRRSHLWADIE 180
Query: 498 KVYNSKRNRAGKGKLRNRQHKQKLGPVVIYGQDAECARAFRNIPGVDVMNVERLNLLKLA 319
KVY+SKRNRAGKGKLRNRQHKQKLGPVVIYGQDAECARAFRNIPGVDV+NVERLNLLKLA
Sbjct: 181 KVYHSKRNRAGKGKLRNRQHKQKLGPVVIYGQDAECARAFRNIPGVDVLNVERLNLLKLA 240
Query: 318 PGGHLGRLIIWTESAFKKLDTIYGTTVANSSQLKKGWSVPLPIMANSDFSRIIRSEEVVK 139
PGGHLGRL+IWTESAFKKLD IYGTTVANSSQLKKGWSVPLPIMANSDFSRIIRSEEVVK
Sbjct: 241 PGGHLGRLVIWTESAFKKLDAIYGTTVANSSQLKKGWSVPLPIMANSDFSRIIRSEEVVK 300
Query: 138 AIRAPKKNPVLPKVHRNPLKKRTLLYKLNPYASILRKASKANVKK 4
AIRAPKKNPVLPK+HRNPLKKRTLLYKLNPYASILRKASKA+ KK
Sbjct: 301 AIRAPKKNPVLPKIHRNPLKKRTLLYKLNPYASILRKASKASAKK 345