Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= B0244_2
         (543 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17551748|ref|NP_498238.1| nematode specific membrane protein ...   374   e-103
gi|39586513|emb|CAE73640.1| Hypothetical protein CBG21140 [Caeno...    97   2e-19
gi|39584904|emb|CAE64328.1| Hypothetical protein CBG09008 [Caeno...    65   2e-12
gi|23003180|ref|ZP_00046848.1| COG0477: Permeases of the major f...    39   0.044
gi|1040947|gb|AAA79939.1| NADH dehydrogenase subunit 6                 39   0.058
gi|1040943|gb|AAA79937.1| NADH dehydrogenase subunit 6                 39   0.058
gi|1040939|gb|AAA79935.1| NADH dehydrogenase subunit 6                 39   0.058
gi|1040957|gb|AAA79944.1| NADH dehydrogenase subunit 6                 39   0.076
gi|3122547|sp|Q33635|NU6M_ANOAL NADH-UBIQUINONE OXIDOREDUCTASE C...    38   0.099
gi|1040929|gb|AAA79930.1| NADH dehydrogenase subunit 6                 38   0.099
gi|1040955|gb|AAA79943.1| NADH dehydrogenase subunit 6                 38   0.099
gi|1040927|gb|AAA79929.1| NADH dehydrogenase subunit 6                 38   0.099
gi|1040951|gb|AAA79941.1| NADH dehydrogenase subunit 6                 37   0.17
gi|38111604|gb|EAA57160.1| hypothetical protein MG08129.4 [Magna...    37   0.17
gi|1040935|gb|AAA79933.1| NADH dehydrogenase subunit 6                 37   0.22
gi|42519828|ref|NP_965758.1| major facilitator superfamily perme...    37   0.29
gi|84045|pir||A05235 hypothetical protein A-288 - Trypanosoma br...    36   0.38
gi|84041|pir||F22845 hypothetical protein 6 - Trypanosoma brucei...    36   0.38
gi|897642|gb|AAB59222.1| ORF2 bases 1807-2850; first start codon...    36   0.38
gi|23619420|ref|NP_705382.1| hypothetical protein, conserved [Pl...    36   0.49
gi|50085618|ref|YP_047128.1| putative purine cytosine permease [...    36   0.49
gi|50420777|ref|XP_458928.1| unnamed protein product [Debaryomyc...    35   0.64
gi|15234601|ref|NP_192421.1| equilibrative nucleoside transporte...    35   1.1
gi|18478893|dbj|BAB84542.1| NADH dehydrogenase subunit 1 [Bhutan...    35   1.1
gi|50083380|ref|YP_044890.1| putative virulence factor MviN fami...    34   1.4
gi|25045186|emb|CAC95192.1| NADH dehydrogenase subunit 6 [Schist...    34   1.4
gi|22328363|ref|NP_192420.2| equilibrative nucleoside transporte...    34   1.4
gi|37678305|ref|NP_932914.1| 4-hydroxybenzoate polyprenyltransfe...    34   1.9
gi|15888127|ref|NP_353808.1| AGR_C_1434p [Agrobacterium tumefaci...    34   1.9
gi|39590204|emb|CAE61202.1| Hypothetical protein CBG04990 [Caeno...    34   1.9
gi|20091628|ref|NP_617703.1| predicted protein [Methanosarcina a...    34   1.9
gi|27364580|ref|NP_760108.1| 4-hydroxybenzoate polyprenyltransfe...    33   2.4
gi|19549337|gb|AAD51594.2| MRP-like transporter [Candida albicans]     33   2.4
gi|23508045|ref|NP_700715.1| hypothetical protein [Plasmodium fa...    33   2.4
gi|46439278|gb|EAK98598.1| hypothetical protein CaO19.12566 [Can...    33   2.4
gi|21911143|ref|NP_665411.1| putative transcriptional activator ...    33   2.4
gi|28933041|emb|CAD28633.1| NADH dehydrogenase subunit 1 [Timand...    33   2.4
gi|5823681|emb|CAB53864.1| CjaB protein [Campylobacter jejuni]         33   2.4
gi|49087316|ref|XP_405609.1| hypothetical protein AN1472.2 [Aspe...    33   3.2
gi|12249157|ref|NP_066207.2| NADH dehydrogenase subunit 6 [Schis...    33   3.2
gi|19746790|ref|NP_607926.1| putative transcriptional activator ...    33   4.2
gi|15675682|ref|NP_269856.1| putative transcriptional activator ...    33   4.2
gi|28933025|emb|CAD28625.1| NADH dehydrogenase subunit 1 [Timand...    33   4.2
gi|24651863|ref|NP_610408.1| CG14743-PA [Drosophila melanogaster...    32   5.4
gi|266076|gb|AAB25505.1| angiotensin receptor AT1 [rats, Sprague...    32   5.4
gi|15791554|ref|NP_281377.1| putative integral membrane protein ...    32   5.4
gi|39586515|emb|CAE73642.1| Hypothetical protein CBG21142 [Caeno...    32   5.4
gi|28933043|emb|CAD28634.1| NADH dehydrogenase subunit 1 [Timand...    32   5.4
gi|41017501|sp|Q96495|ORM1_SACMO ORM1 protein >gnl|BL_ORD_ID|133...    32   5.4
gi|38018142|ref|NP_937899.1| NADH dehydrogenase subunit 6 [Stron...    32   7.1
gi|24216694|ref|NP_714175.1| two-component hybrid sensor and reg...    32   7.1
gi|8928584|ref|NP_059389.1| orf265_2 [Paramecium aurelia]              32   7.1
gi|50284957|ref|XP_444907.1| unnamed protein product [Candida gl...    32   7.1
gi|31200743|ref|XP_309319.1| ENSANGP00000018512 [Anopheles gambi...    32   7.1
gi|45659014|ref|YP_003100.1| histidine kinase response regulator...    32   7.1
gi|29126175|ref|NP_803447.1| NADH dehydrogenase subunit 6 [Anthe...    32   9.3
gi|34368744|gb|AAN38918.1| NADH dehydrogenase subunit 4 [Longist...    32   9.3
gi|29345998|ref|NP_809501.1| BexA, multidrug efflux pump [Bacter...    32   9.3
gi|15528535|dbj|BAB64566.1| BexA [Bacteroides thetaiotaomicron]        32   9.3
gi|15792308|ref|NP_282131.1| transmembrane transport protein [Ca...    32   9.3
gi|5835689|ref|NP_008505.1|ND4_15044 NADH dehydrogenase subunit ...    32   9.3
gi|33356790|ref|NP_877696.1| hypothetical protein PAB1409.1n [Py...    32   9.3
gi|48478237|ref|YP_023943.1| glycosyltransferase [Picrophilus to...    32   9.3
gi|32408979|ref|XP_324970.1| hypothetical protein ( (AJ009759) p...    32   9.3
gi|24414910|emb|CAD55686.1| Hypothetical protein [Pyrococcus aby...    32   9.3
gi|16767117|ref|NP_462732.1| putative permease [Salmonella typhi...    32   9.3
gi|49095490|ref|XP_409206.1| hypothetical protein AN5069.2 [Aspe...    32   9.3
gi|27367261|ref|NP_762788.1| Amino acid permease [Vibrio vulnifi...    32   9.3


>gi|17551748|ref|NP_498238.1| nematode specific membrane protein
           (20.6 kD) (3G820) [Caenorhabditis elegans]
 gi|25375437|pir||C88465 protein B0244.9 [imported] - Caenorhabditis
           elegans
 gi|861357|gb|AAA68377.1| Hypothetical protein B0244.9
           [Caenorhabditis elegans]
          Length = 180

 Score =  374 bits (960), Expect = e-103
 Identities = 180/180 (100%), Positives = 180/180 (100%)
 Frame = -1

Query: 543 MNPDSCASVDLEYVHVEDENPNENEPARLRAGFEWAAEPDEILIAGVPTKFIMFGLSCFL 364
           MNPDSCASVDLEYVHVEDENPNENEPARLRAGFEWAAEPDEILIAGVPTKFIMFGLSCFL
Sbjct: 1   MNPDSCASVDLEYVHVEDENPNENEPARLRAGFEWAAEPDEILIAGVPTKFIMFGLSCFL 60

Query: 363 VILTLSLWIASTHYSYFIWLVFATLYMGLIVFLPEYFSNIISFALNFIYWIAYCIFTFIG 184
           VILTLSLWIASTHYSYFIWLVFATLYMGLIVFLPEYFSNIISFALNFIYWIAYCIFTFIG
Sbjct: 61  VILTLSLWIASTHYSYFIWLVFATLYMGLIVFLPEYFSNIISFALNFIYWIAYCIFTFIG 120

Query: 183 IILDVVRRGDSCSSGMSKEVCDANRHGYMLAICFGCADLLIAGVIMILMFRMLNYYYINR 4
           IILDVVRRGDSCSSGMSKEVCDANRHGYMLAICFGCADLLIAGVIMILMFRMLNYYYINR
Sbjct: 121 IILDVVRRGDSCSSGMSKEVCDANRHGYMLAICFGCADLLIAGVIMILMFRMLNYYYINR 180




[DB home][top]