Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= B0286_3
(1335 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17531281|ref|NP_494772.1| transcription complex (48.1 kD) (2E... 779 0.0
gi|17531279|ref|NP_494773.1| transcription complex (2E664) [Caen... 649 0.0
gi|39595094|emb|CAE60131.1| Hypothetical protein CBG03676 [Caeno... 610 e-173
gi|17531277|ref|NP_494774.1| transcription complex (34.7 kD) (2E... 561 e-158
gi|49115752|gb|AAH73075.1| Unknown (protein for IMAGE:5156126) [... 213 8e-54
gi|26346971|dbj|BAC37134.1| unnamed protein product [Mus musculus] 213 1e-53
gi|46395846|sp|Q8C5L3|CNO2_MOUSE CCR4-NOT transcription complex ... 213 1e-53
gi|21312480|ref|NP_082358.1| CCR4-NOT transcription complex, sub... 213 1e-53
gi|34864872|ref|XP_216889.2| similar to CCR4-NOT transcription c... 213 1e-53
gi|38649289|gb|AAH63105.1| Cnot2 protein [Mus musculus] 213 1e-53
gi|7657385|ref|NP_055330.1| CCR4-NOT transcription complex, subu... 212 1e-53
gi|11640600|gb|AAG39297.1| MSTP046 [Homo sapiens] 212 1e-53
gi|29144934|gb|AAH43133.1| Cnot2 protein [Mus musculus] 210 5e-53
gi|47225772|emb|CAF98252.1| unnamed protein product [Tetraodon n... 206 1e-51
gi|7020899|dbj|BAA91313.1| unnamed protein product [Homo sapiens] 200 6e-50
gi|31208601|ref|XP_313267.1| ENSANGP00000010439 [Anopheles gambi... 193 7e-48
gi|31196769|ref|XP_307332.1| ENSANGP00000013681 [Anopheles gambi... 193 7e-48
gi|6841484|gb|AAF29095.1| HSPC131 [Homo sapiens] 175 2e-42
gi|34365441|emb|CAE46054.1| hypothetical protein [Homo sapiens] 174 3e-42
gi|20151531|gb|AAM11125.1| GM14102p [Drosophila melanogaster] 168 2e-40
gi|24644320|ref|NP_730966.1| CG2161-PA [Drosophila melanogaster]... 167 4e-40
gi|1658504|gb|AAB18342.1| Rga [Drosophila melanogaster] 167 4e-40
gi|24644318|ref|NP_524239.2| CG2161-PB [Drosophila melanogaster]... 167 4e-40
gi|11360112|pir||T46494 hypothetical protein DKFZp434M0572.1 - h... 144 6e-33
gi|47497412|dbj|BAD19449.1| putative CCR4-NOT transcription comp... 118 4e-25
gi|49067697|ref|XP_398138.1| hypothetical protein UM00523.1 [Ust... 117 8e-25
gi|18424272|ref|NP_568912.1| transcription regulator NOT2/NOT3/N... 105 3e-21
gi|50547551|ref|XP_501245.1| hypothetical protein [Yarrowia lipo... 103 9e-21
gi|25406997|pir||B86212 protein F24B9.20 [imported] - Arabidopsi... 94 1e-17
gi|39594574|emb|CAE72152.1| Hypothetical protein CBG19250 [Caeno... 91 6e-17
gi|46575971|gb|AAT01332.1| unknown protein [Oryza sativa (japoni... 89 3e-16
gi|17560922|ref|NP_505410.1| transcription complex like (56.0 kD... 89 3e-16
gi|17560920|ref|NP_505409.1| transcription complex like (5J807) ... 89 3e-16
gi|50426537|ref|XP_461865.1| unnamed protein product [Debaryomyc... 87 7e-16
gi|23508488|ref|NP_701157.1| hypothetical protein [Plasmodium fa... 86 3e-15
gi|19075323|ref|NP_587823.1| hypothetical protein [Schizosacchar... 86 3e-15
gi|32398828|emb|CAD98538.1| f24b9.20, possible [Cryptosporidium ... 85 3e-15
gi|46229290|gb|EAK90139.1| CCR4-NOT transcription complex, subun... 85 3e-15
gi|46121443|ref|XP_385276.1| hypothetical protein FG05100.1 [Gib... 85 3e-15
gi|23477974|gb|EAA15186.1| Drosophila melanogaster CG15040 gene ... 84 6e-15
gi|46440728|gb|EAL00031.1| hypothetical protein CaO19.13496 [Can... 83 2e-14
gi|38103743|gb|EAA50410.1| hypothetical protein MG04169.4 [Magna... 82 3e-14
gi|29788854|gb|AAP03400.1| putative transcriptional regulator [O... 82 3e-14
gi|47212275|emb|CAF89507.1| unnamed protein product [Tetraodon n... 79 2e-13
gi|18390801|ref|NP_563795.1| NOT2/NOT3/NOT5 family protein [Arab... 78 4e-13
gi|19921380|ref|NP_609750.1| CG15262-PA [Drosophila melanogaster... 76 2e-12
gi|50259574|gb|EAL22247.1| hypothetical protein CNBC3850 [Crypto... 75 5e-12
gi|18958723|gb|AAL82704.1| Tcc1a22.4 [Trypanosoma cruzi] 69 3e-10
gi|10801662|dbj|BAB16748.1| hypothetical protein [Macaca fascicu... 67 7e-10
gi|45185537|ref|NP_983253.1| ACL151Cp [Eremothecium gossypii] >g... 67 1e-09
gi|6320036|ref|NP_010116.1| Component of the CCR4-NOT complex, w... 67 1e-09
gi|50289927|ref|XP_447395.1| unnamed protein product [Candida gl... 66 2e-09
gi|50307273|ref|XP_453615.1| unnamed protein product [Kluyveromy... 66 2e-09
gi|33337550|gb|AAQ13426.1| unknown [Homo sapiens] 65 3e-09
gi|24661136|ref|NP_648253.1| CG6576-PA [Drosophila melanogaster]... 65 4e-09
gi|50728332|ref|XP_416093.1| PREDICTED: similar to CCR4-NOT tran... 62 4e-08
gi|49097150|ref|XP_410035.1| hypothetical protein AN5898.2 [Aspe... 62 4e-08
gi|32415802|ref|XP_328379.1| hypothetical protein [Neurospora cr... 58 4e-07
gi|32405122|ref|XP_323174.1| hypothetical protein [Neurospora cr... 52 4e-05
gi|38111573|gb|EAA57132.1| hypothetical protein MG08101.4 [Magna... 50 9e-05
gi|50257584|gb|EAL20289.1| hypothetical protein CNBF1010 [Crypto... 50 1e-04
gi|49094522|ref|XP_408722.1| hypothetical protein AN4585.2 [Aspe... 50 1e-04
gi|19115701|ref|NP_594789.1| putative transcriptional regulator ... 50 2e-04
gi|49081140|ref|XP_404010.1| hypothetical protein UM06395.1 [Ust... 49 2e-04
gi|50552432|ref|XP_503626.1| hypothetical protein [Yarrowia lipo... 49 3e-04
gi|31712091|gb|AAP68395.1| unknown protein [Oryza sativa (japoni... 47 0.001
gi|47221630|emb|CAF97895.1| unnamed protein product [Tetraodon n... 47 0.001
gi|17552240|ref|NP_499534.1| NOT-like, component of CCR4/NOT com... 46 0.002
gi|30424361|emb|CAD90172.1| Hypothetical protein Y56A3A.1 [Caeno... 46 0.002
gi|39584830|emb|CAE67725.1| Hypothetical protein CBG13300 [Caeno... 46 0.002
gi|50418265|gb|AAH77869.1| Unknown (protein for MGC:80612) [Xeno... 46 0.002
gi|28828911|gb|AAO51497.1| similar to Mus musculus (Mouse). simi... 45 0.003
gi|20818453|ref|XP_133124.1| similar to CCR4-NOT transcription c... 45 0.003
gi|50510591|dbj|BAD32281.1| mKIAA0691 protein [Mus musculus] 45 0.003
gi|22122717|ref|NP_666288.1| CCR4-NOT transcription complex, sub... 45 0.003
gi|34854462|ref|XP_218187.2| similar to CCR4-NOT transcription c... 45 0.003
gi|9758905|dbj|BAB09481.1| unnamed protein product [Arabidopsis ... 45 0.004
gi|13877645|gb|AAK43900.1| Unknown protein [Arabidopsis thaliana... 45 0.004
gi|18418549|ref|NP_568361.1| transcription regulator NOT2/NOT3/N... 45 0.004
gi|7657387|ref|NP_055331.1| CCR4-NOT transcription complex, subu... 45 0.005
gi|23507866|ref|NP_700536.1| hypothetical protein [Plasmodium fa... 45 0.005
gi|40788331|dbj|BAA31666.2| KIAA0691 protein [Homo sapiens] 45 0.005
gi|31238470|ref|XP_319780.1| ENSANGP00000005181 [Anopheles gambi... 44 0.007
gi|28372046|emb|CAD66421.1| putative transcriptional regulator [... 44 0.009
gi|38000001|gb|AAR07088.1| unknown protein [Oryza sativa (japoni... 44 0.009
gi|29788870|gb|AAP03416.1| unknown protein [Oryza sativa (japoni... 44 0.009
gi|19921660|ref|NP_610176.1| CG8426-PA [Drosophila melanogaster]... 44 0.009
gi|19074402|ref|NP_585908.1| hypothetical protein [Encephalitozo... 43 0.015
gi|23483044|gb|EAA18843.1| hypothetical protein [Plasmodium yoel... 43 0.015
gi|19075115|ref|NP_586716.1| GENERAL NEGATIVE REGULATOR OF TRANS... 40 0.13
gi|23502904|ref|NP_699031.1| ABC transporter, ATP-binding protei... 38 0.62
gi|17986296|ref|NP_538930.1| ABC TRANSPORTER ATP-BINDING PROTEIN... 38 0.62
gi|26449560|dbj|BAC41906.1| putative VIP2 protein [Arabidopsis t... 37 1.1
gi|50292769|ref|XP_448817.1| unnamed protein product [Candida gl... 36 1.8
gi|47211748|emb|CAF94313.1| unnamed protein product [Tetraodon n... 35 4.0
gi|50308279|ref|XP_454140.1| unnamed protein product [Kluyveromy... 35 4.0
gi|50303977|ref|XP_451938.1| unnamed protein product [Kluyveromy... 35 5.3
gi|46229474|gb|EAK90292.1| regena domain protein (CCR-Not comple... 35 5.3
gi|50547389|ref|XP_501164.1| hypothetical protein [Yarrowia lipo... 34 9.0
>gi|17531281|ref|NP_494772.1| transcription complex (48.1 kD) (2E664)
[Caenorhabditis elegans]
gi|7494836|pir||T15310 hypothetical protein B0286.4 - Caenorhabditis
elegans
gi|1053220|gb|AAA80691.1| Not-like (yeast ccr4/not complex component)
protein 2, isoform a [Caenorhabditis elegans]
Length = 444
Score = 779 bits (2012), Expect = 0.0
Identities = 388/444 (87%), Positives = 388/444 (87%)
Frame = -1
Query: 1335 MNSVGGVATERRLPQTQQFLSHSNFHSNATIIDESQFPXXXXXXXXXXXXXXXSPIPTTS 1156
MNSVGGVATERRLPQTQQFLSHSNFHSNATIIDESQFP SPIPTTS
Sbjct: 1 MNSVGGVATERRLPQTQQFLSHSNFHSNATIIDESQFPSLGAKGTSSLGGGGFSPIPTTS 60
Query: 1155 GGVLNVAQSSPSRDLYGAQRPNYANLMRSDPSLTNPEFQIQNEDFPALPGVGSGQTQRSM 976
GGVLNVAQSSPSRDLYGAQRPNYANLMRSDPSLTNPEFQIQNEDFPALPGVGSGQTQRSM
Sbjct: 61 GGVLNVAQSSPSRDLYGAQRPNYANLMRSDPSLTNPEFQIQNEDFPALPGVGSGQTQRSM 120
Query: 975 LGDQLANMLADDHQVDFAGPLGDCDPSRLSGISRNSQEGPMHGIITHPDGEVTNIPASML 796
LGDQLANMLADDHQVDFAGPLGDCDPSRLSGISRNSQEGPMHGIITHPDGEVTNIPASML
Sbjct: 121 LGDQLANMLADDHQVDFAGPLGDCDPSRLSGISRNSQEGPMHGIITHPDGEVTNIPASML 180
Query: 795 DDQFGMAGLVTYLRTVDNPSIVSLALGYDLTTLGLNLNLSERKLYMNFGGPWADSPIRAH 616
DDQFGMAGLVTYLRTVDNPSIVSLALGYDLTTLGLNLNLSERKLYMNFGGPWADSPIRAH
Sbjct: 181 DDQFGMAGLVTYLRTVDNPSIVSLALGYDLTTLGLNLNLSERKLYMNFGGPWADSPIRAH 240
Query: 615 ELDVKVPEEYMTHNHIRDKLPPLRLNKVSEDVLFYLFYNCPNEIYQVAAACELYAREWRF 436
ELDVKVPEEYMTHNHIRDKLPPLRLNKVSEDVLFYLFYNCPNEIYQVAAACELYAREWRF
Sbjct: 241 ELDVKVPEEYMTHNHIRDKLPPLRLNKVSEDVLFYLFYNCPNEIYQVAAACELYAREWRF 300
Query: 435 HKSEQVWLTRSQYGGVKEQTGNYEKGHYNVFDQMQWRKIPXXXXXXXXXXEDRPKMPQSV 256
HKSEQVWLTRSQYGGVKEQTGNYEKGHYNVFDQMQWRKIP EDRPKMPQSV
Sbjct: 301 HKSEQVWLTRSQYGGVKEQTGNYEKGHYNVFDQMQWRKIPKELKLEYKELEDRPKMPQSV 360
Query: 255 SGQPTPYKYFFQGPQFPSGPETGLMLQMHNXXXXXXXXXXGQITPPAPXXXXXXXXXXXX 76
SGQPTPYKYFFQGPQFPSGPETGLMLQMHN GQITPPAP
Sbjct: 361 SGQPTPYKYFFQGPQFPSGPETGLMLQMHNLTLGTGGGGGGQITPPAPAGLNGVMGGGGV 420
Query: 75 XXXXXXXXXVQPGAVPSAARATPN 4
VQPGAVPSAARATPN
Sbjct: 421 GAAGIGGINVQPGAVPSAARATPN 444
>gi|17531279|ref|NP_494773.1| transcription complex (2E664)
[Caenorhabditis elegans]
gi|15963714|gb|AAL11099.1| Not-like (yeast ccr4/not complex
component) protein 2, isoform b [Caenorhabditis elegans]
Length = 367
Score = 649 bits (1673), Expect = 0.0
Identities = 319/363 (87%), Positives = 321/363 (87%)
Frame = -1
Query: 1092 NYANLMRSDPSLTNPEFQIQNEDFPALPGVGSGQTQRSMLGDQLANMLADDHQVDFAGPL 913
++ NLMRSDPSLTNPEFQIQNEDFPALPGVGSGQTQRSMLGDQLANMLADDHQVDFAGPL
Sbjct: 5 SFPNLMRSDPSLTNPEFQIQNEDFPALPGVGSGQTQRSMLGDQLANMLADDHQVDFAGPL 64
Query: 912 GDCDPSRLSGISRNSQEGPMHGIITHPDGEVTNIPASMLDDQFGMAGLVTYLRTVDNPSI 733
GDCDPSRLSGISRNSQEGPMHGIITHPDGEVTNIPASMLDDQFGMAGLVTYLRTVDNPSI
Sbjct: 65 GDCDPSRLSGISRNSQEGPMHGIITHPDGEVTNIPASMLDDQFGMAGLVTYLRTVDNPSI 124
Query: 732 VSLALGYDLTTLGLNLNLSERKLYMNFGGPWADSPIRAHELDVKVPEEYMTHNHIRDKLP 553
VSLALGYDLTTLGLNLNLSERKLYMNFGGPWADSPIRAHELDVKVPEEYMTHNHIRDKLP
Sbjct: 125 VSLALGYDLTTLGLNLNLSERKLYMNFGGPWADSPIRAHELDVKVPEEYMTHNHIRDKLP 184
Query: 552 PLRLNKVSEDVLFYLFYNCPNEIYQVAAACELYAREWRFHKSEQVWLTRSQYGGVKEQTG 373
PLRLNKVSEDVLFYLFYNCPNEIYQVAAACELYAREWRFHKSEQVWLTRSQYGGVKEQTG
Sbjct: 185 PLRLNKVSEDVLFYLFYNCPNEIYQVAAACELYAREWRFHKSEQVWLTRSQYGGVKEQTG 244
Query: 372 NYEKGHYNVFDQMQWRKIPXXXXXXXXXXEDRPKMPQSVSGQPTPYKYFFQGPQFPSGPE 193
NYEKGHYNVFDQMQWRKIP EDRPKMPQSVSGQPTPYKYFFQGPQFPSGPE
Sbjct: 245 NYEKGHYNVFDQMQWRKIPKELKLEYKELEDRPKMPQSVSGQPTPYKYFFQGPQFPSGPE 304
Query: 192 TGLMLQMHNXXXXXXXXXXGQITPPAPXXXXXXXXXXXXXXXXXXXXXVQPGAVPSAARA 13
TGLMLQMHN GQITPPAP VQPGAVPSAARA
Sbjct: 305 TGLMLQMHNLTLGTGGGGGGQITPPAPAGLNGVMGGGGVGAAGIGGINVQPGAVPSAARA 364
Query: 12 TPN 4
TPN
Sbjct: 365 TPN 367