Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= B0303_3
(1851 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17551804|ref|NP_498916.1| ubiquitin domain containing protein... 964 0.0
gi|283528|pir||S27786 acidic protein - Caenorhabditis elegans (f... 929 0.0
gi|39585075|emb|CAE62726.1| Hypothetical protein CBG06886 [Caeno... 375 e-102
gi|47211314|emb|CAF92107.1| unnamed protein product [Tetraodon n... 70 2e-10
gi|11967945|ref|NP_071863.1| hypothetical protein, clone 1-2 [Mu... 70 2e-10
gi|38454298|ref|NP_942076.1| Unknown (protein for MGC:72996) [Ra... 69 3e-10
gi|13899257|ref|NP_113622.1| chromosome 7 open reading frame 21 ... 69 5e-10
gi|28973799|ref|NP_803190.1| hypothetical protein MGC3123 [Homo ... 69 5e-10
gi|33341676|gb|AAQ15209.1| FP2653 [Homo sapiens] >gnl|BL_ORD_ID|... 69 5e-10
gi|47086927|ref|NP_998463.1| zgc:77146 [Danio rerio] >gnl|BL_ORD... 68 7e-10
gi|47212488|emb|CAF90284.1| unnamed protein product [Tetraodon n... 68 7e-10
gi|22204247|emb|CAD43429.1| SI:dZ180G5.5 (novel ubiquitin) [Dani... 64 2e-08
gi|20988715|gb|AAH29841.1| 2010008E23Rik protein [Mus musculus] 63 2e-08
gi|12842172|dbj|BAB25500.1| unnamed protein product [Mus musculus] 63 2e-08
gi|27689889|ref|XP_221010.1| similar to RIKEN cDNA 2010008E23 ge... 63 2e-08
gi|16740606|gb|AAH16187.1| RIKEN cDNA 2010008E23 gene [Mus muscu... 63 2e-08
gi|38091832|ref|XP_126502.2| RIKEN cDNA 2010008E23 [Mus musculus] 63 2e-08
gi|50803189|ref|XP_428658.1| PREDICTED: similar to Zgc:77146 [Ga... 49 5e-04
gi|14334546|gb|AAK59681.1| putative ubiquitin protein [Arabidops... 43 0.029
gi|15227388|ref|NP_179311.1| ubiquitin family protein [Arabidops... 43 0.029
gi|8163900|gb|AAF73908.1| polyprotein [bovine viral diarrhea vir... 41 0.11
gi|18398343|ref|NP_565407.1| ubiquitin family protein [Arabidops... 39 0.32
gi|25411786|pir||B84549 probable ubiquitin-like protein [importe... 39 0.32
gi|23270954|gb|AAH32838.1| Unknown (protein for MGC:27021) [Homo... 38 0.72
gi|32526894|ref|NP_849149.2| hypothetical protein FLJ35834 [Homo... 38 0.72
gi|37589366|gb|AAH59307.1| Bat2-A-prov protein [Xenopus laevis] 38 0.94
gi|10433006|dbj|BAB13886.1| unnamed protein product [Homo sapiens] 37 1.6
gi|49076484|ref|XP_402211.1| hypothetical protein UM04596.1 [Ust... 36 3.6
gi|24580743|ref|NP_722667.1| CG4124-PC [Drosophila melanogaster]... 36 3.6
gi|46397756|sp|Q91W67|ULSB_MOUSE Ubiquitin-like protein SB132 >g... 36 3.6
gi|14585883|gb|AAK67643.1| ubiquitin-like protein SB132 [Homo sa... 36 3.6
gi|21312294|ref|NP_081362.1| RIKEN cDNA 2300004C15 [Mus musculus... 36 3.6
gi|14249682|ref|NP_116296.1| bone marrow stromal cell-derived ub... 36 3.6
gi|20891123|ref|XP_147000.1| RIKEN cDNA 2300004C15 [Mus musculus] 36 3.6
gi|44885244|emb|CAE45726.1| PNUTSDm protein [Drosophila melanoga... 36 3.6
gi|44885228|emb|CAE45725.1| PNUTSDm protein [Drosophila melanoga... 36 3.6
gi|7512181|pir||T30561 Scythe protein - African clawed frog >gnl... 36 3.6
gi|19920484|ref|NP_608554.1| CG4124-PB [Drosophila melanogaster]... 36 3.6
gi|27720265|ref|XP_217148.1| similar to RIKEN cDNA 2300004C15 [R... 36 3.6
gi|38014489|gb|AAH60479.1| MGC68734 protein [Xenopus laevis] 35 6.1
gi|5523987|gb|AAD44046.1| polyprotein [Bovine viral diarrhea vir... 35 6.1
gi|37536540|ref|NP_922572.1| putative ubiquitin protein [Oryza s... 35 6.1
gi|50288227|ref|XP_446542.1| unnamed protein product [Candida gl... 35 8.0
gi|23488084|gb|EAA21227.1| Ubiquitin family, putative [Plasmodiu... 35 8.0
gi|46391798|gb|AAS90944.1| trancription cofactor TAF250 [Arabido... 35 8.0
gi|48861644|ref|ZP_00315544.1| hypothetical protein Mdeg02003042... 35 8.0
gi|9280321|dbj|BAB01700.1| unnamed protein product [Arabidopsis ... 35 8.0
>gi|17551804|ref|NP_498916.1| ubiquitin domain containing protein
(70.1 kD) (3J781) [Caenorhabditis elegans]
gi|21431855|sp|P34256|YKA4_CAEEL Hypothetical protein B0303.4 in
chromosome III
gi|15963718|gb|AAA27898.3| Hypothetical protein B0303.4
[Caenorhabditis elegans]
Length = 616
Score = 964 bits (2493), Expect = 0.0
Identities = 498/616 (80%), Positives = 498/616 (80%)
Frame = +1
Query: 1 MNALIVKSALEYLELSTVVXXXXXXXXXXXSYQISARRPLYYNLFVVEMHTWTTRRMVQV 180
MNALIVKSALEYLELSTVV SYQISARRPLYYNLFVVEMHTWTTRRMVQV
Sbjct: 1 MNALIVKSALEYLELSTVVAILIIIACALLSYQISARRPLYYNLFVVEMHTWTTRRMVQV 60
Query: 181 LHLGQEFTPPVTWERLVQRMRARAPRIQGEQRVAISDTNIVIQSPNTVIDSPAPARSPDV 360
LHLGQEFTPPVTWERLVQRMRARAPRIQGEQRVAISDTNIVIQSPNTVIDSPAPARSPDV
Sbjct: 61 LHLGQEFTPPVTWERLVQRMRARAPRIQGEQRVAISDTNIVIQSPNTVIDSPAPARSPDV 120
Query: 361 DLITLWDIEMPPPSAGHVPDATRDSQYXXXXXXXXXXRGDDASLMSRTYRPQLRPPTERS 540
DLITLWDIEMPPPSAGHVPDATRDSQY RGDDASLMSRTYRPQLRPPTERS
Sbjct: 121 DLITLWDIEMPPPSAGHVPDATRDSQYAAAAAIAILARGDDASLMSRTYRPQLRPPTERS 180
Query: 541 GNTRVDESRPSENSSRHXXXXXXXXXXXPSINPDMQHHLSTRTSNVTQTQPPTNQVFADT 720
GNTRVDESRPSENSSRH PSINPDMQHHLSTRTSNVTQTQPPTNQVFADT
Sbjct: 181 GNTRVDESRPSENSSRHDYVTTDVTYTTPSINPDMQHHLSTRTSNVTQTQPPTNQVFADT 240
Query: 721 PELTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGPXXXXXX 900
PELT RGGP
Sbjct: 241 PELTEDIVIDQQEEDDEEDDDDDSSDDAIIEDHEEEEGQDDDEETEIEIDRGGPIEEIEQ 300
Query: 901 XXXXXNEDPPLDDQEVEAQPEQVLQETKESEFPVIEGPSEGKILIKLKFMNDTEKNTYAS 1080
NEDPPLDDQEVEAQPEQVLQETKESEFPVIEGPSEGKILIKLKFMNDTEKNTYAS
Sbjct: 301 VEVEQNEDPPLDDQEVEAQPEQVLQETKESEFPVIEGPSEGKILIKLKFMNDTEKNTYAS 360
Query: 1081 LEDTVAKFKVDHFTNLANQVIRLIYQGQLLREDHRTLEEYGLQPGSIVHCHISTTPYTRP 1260
LEDTVAKFKVDHFTNLANQVIRLIYQGQLLREDHRTLEEYGLQPGSIVHCHISTTPYTRP
Sbjct: 361 LEDTVAKFKVDHFTNLANQVIRLIYQGQLLREDHRTLEEYGLQPGSIVHCHISTTPYTRP 420
Query: 1261 GIATLPPIVNNGFXXXXXXXXXXXXDTTPMPSESVPVVDENVTTARRRAAQDRNVGQIYL 1440
GIATLPPIVNNGF DTTPMPSESVPVVDENVTTARRRAAQDRNVGQIYL
Sbjct: 421 GIATLPPIVNNGFRRRPRRSVRAPRDTTPMPSESVPVVDENVTTARRRAAQDRNVGQIYL 480
Query: 1441 LLSTMVPILSGIGLAFFRPDRIRDLLRPATLLTISQWVCNLLVDNGLLEQDDDDQETHLQ 1620
LLSTMVPILSGIGLAFFRPDRIRDLLRPATLLTISQWVCNLLVDNGLLEQDDDDQETHLQ
Sbjct: 481 LLSTMVPILSGIGLAFFRPDRIRDLLRPATLLTISQWVCNLLVDNGLLEQDDDDQETHLQ 540
Query: 1621 TSTLFWIFGGQMVAVSIFLYYFPDVFDRVGXXXXXXXXXXXXXXXXXRQRRRQPDPVEVQ 1800
TSTLFWIFGGQMVAVSIFLYYFPDVFDRVG RQRRRQPDPVEVQ
Sbjct: 541 TSTLFWIFGGQMVAVSIFLYYFPDVFDRVGFSIFIIVFLYFVFVVYSRQRRRQPDPVEVQ 600
Query: 1801 NEMMENQIVQETIRLL 1848
NEMMENQIVQETIRLL
Sbjct: 601 NEMMENQIVQETIRLL 616
>gi|283528|pir||S27786 acidic protein - Caenorhabditis elegans
(fragment)
gi|25375255|pir||D88536 acidic protein - Caenorhabditis elegans
Length = 705
Score = 929 bits (2400), Expect = 0.0
Identities = 484/619 (78%), Positives = 484/619 (78%), Gaps = 17/619 (2%)
Frame = +1
Query: 43 LSTVVXXXXXXXXXXXSYQISARRPLYYNLFVVEMHTWTTRRMVQVLHLGQEFTPPVTWE 222
LSTVV SYQISARRPLYYNLFVVEMHTWTTRRMVQVLHLGQEFTPPVTWE
Sbjct: 1 LSTVVAILIIIACALLSYQISARRPLYYNLFVVEMHTWTTRRMVQVLHLGQEFTPPVTWE 60
Query: 223 RLVQRMRARAPRIQGEQRVAISDTNIVIQSPNTVIDSPAPARSPDVDLITLWDIEMPPPS 402
RLVQRMRARAPRIQGEQRVAISDTNIVIQSPNTVIDSPAPARSPDVDLITLWDIEMPPPS
Sbjct: 61 RLVQRMRARAPRIQGEQRVAISDTNIVIQSPNTVIDSPAPARSPDVDLITLWDIEMPPPS 120
Query: 403 AGHVPDATRDSQYXXXXXXXXXXRGDDASLMSRTYRPQLRPPTERSGNTRVDESRPSENS 582
AGHVPDATRDSQY RGDDASLMSRTYRPQLRPPTERSGNTRVDESRPSENS
Sbjct: 121 AGHVPDATRDSQYAAAAAIAILARGDDASLMSRTYRPQLRPPTERSGNTRVDESRPSENS 180
Query: 583 SRHXXXXXXXXXXXPSINPDMQHHLSTRTSNVTQTQPPTNQVFADTPELTXXXXXXXXXX 762
SRH PSINPDMQHHLSTRTSNVTQTQPPTNQVFADTPELT
Sbjct: 181 SRHDYVTTDVTYTTPSINPDMQHHLSTRTSNVTQTQPPTNQVFADTPELTEDIVIDQQEE 240
Query: 763 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGPXXXXXXXXXXXNEDPPLDDQ 942
RGGP NEDPPLDDQ
Sbjct: 241 DDEEDDDDDSSDDAIIEDHEEEEGQDDDEETEIEIDRGGPIEEIEQVEVEQNEDPPLDDQ 300
Query: 943 EVEAQPEQVLQETKESEFPVIEGPSEGKILIKLKFMNDTEKNTYASLEDTVAKFKVDHFT 1122
EVEAQPEQVLQETKESEFPVIEGPSEGKILIKLKFMNDTEKNTYASLEDTVAKFKVDHFT
Sbjct: 301 EVEAQPEQVLQETKESEFPVIEGPSEGKILIKLKFMNDTEKNTYASLEDTVAKFKVDHFT 360
Query: 1123 NLANQVIRLIYQGQLLREDHRTLEEYGLQPGSIVHCHISTTPYTRPGIATLPPIVNNGFX 1302
NLANQVIRLIYQGQLLREDHRTLEEYGLQPGSIVHCHISTTPYTRPGIATLPPIVNNGF
Sbjct: 361 NLANQVIRLIYQGQLLREDHRTLEEYGLQPGSIVHCHISTTPYTRPGIATLPPIVNNGFR 420
Query: 1303 XXXXXXXXXXXDTTPMPSESVPVVDENVTTARRRAAQDRNVGQIYLLLSTMVPILSGIGL 1482
DTTPMPSESVPVVDENVTTARRRAAQDRNVGQIYLLLSTMVPILSGIGL
Sbjct: 421 RRPRRSVRAPRDTTPMPSESVPVVDENVTTARRRAAQDRNVGQIYLLLSTMVPILSGIGL 480
Query: 1483 AFFRPDRIRDLLRPATLLTISQWVCNLLVDNGLLEQDDDDQETHLQTSTLFWIFG----- 1647
AFFRPDRIRDLLRPATLLTISQWVCNLLVDNGLLEQDDDDQETHLQTSTLFWIFG
Sbjct: 481 AFFRPDRIRDLLRPATLLTISQWVCNLLVDNGLLEQDDDDQETHLQTSTLFWIFGGDSNF 540
Query: 1648 ------------GQMVAVSIFLYYFPDVFDRVGXXXXXXXXXXXXXXXXXRQRRRQPDPV 1791
GQMVAVSIFLYYFPDVFDRVG RQRRRQPDPV
Sbjct: 541 QKKTRQNAIFITGQMVAVSIFLYYFPDVFDRVGFSIFIIVFLYFVFVVYSRQRRRQPDPV 600
Query: 1792 EVQNEMMENQIVQETIRLL 1848
EVQNEMMENQIVQETIRLL
Sbjct: 601 EVQNEMMENQIVQETIRLL 619