Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= B0511_7
         (618 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25145035|ref|NP_740914.1| putative nuclear protein (1L216) [C...   291   9e-78
gi|25145032|ref|NP_740913.1| putative nuclear protein (1L216) [C...   259   2e-68
gi|39589816|emb|CAE67051.1| Hypothetical protein CBG12458 [Caeno...   126   3e-28
gi|802119|gb|AAB33577.1| Mm4 muscarinic acetylcholine receptor; ...    35   1.5
gi|21221543|ref|NP_627322.1| hypothetical protein SCE41.13c [Str...    33   3.3
gi|46316905|ref|ZP_00217483.1| COG2216: High-affinity K+ transpo...    32   7.4
gi|22996743|ref|ZP_00040989.1| COG1450: Type II secretory pathwa...    32   7.4
gi|39598195|emb|CAE68887.1| Hypothetical protein CBG14857 [Caeno...    32   7.4
gi|50551555|ref|XP_503252.1| hypothetical protein [Yarrowia lipo...    32   7.4
gi|9629862|ref|NP_045346.1| virion serine/threonine protein kina...    32   9.6


>gi|25145035|ref|NP_740914.1| putative nuclear protein (1L216)
           [Caenorhabditis elegans]
 gi|7494997|pir||T33117 hypothetical protein B0511.9 -
           Caenorhabditis elegans
 gi|20198750|gb|AAM15538.1| Hypothetical protein B0511.9b
           [Caenorhabditis elegans]
          Length = 205

 Score =  291 bits (744), Expect = 9e-78
 Identities = 156/205 (76%), Positives = 156/205 (76%)
 Frame = -1

Query: 618 MSMLRRPLTQLELCEDDIQWLTDQLNKRVLPAVIVPKCXXXXXXXXXXXDQSEPPRGITR 439
           MSMLRRPLTQLELCEDDIQWLTDQLNKRVLPAVIVPKC           DQSEPPRGITR
Sbjct: 1   MSMLRRPLTQLELCEDDIQWLTDQLNKRVLPAVIVPKCEMMDIDEMEPMDQSEPPRGITR 60

Query: 438 RNLRSADRKNRDVPGPSTGECTRTSIAPNRCEMSFTEVQTLTSARTPVAAPTLTLSTPVN 259
           RNLRSADRKNRDVPGPSTGECTRTSIAPNRCEMSFTEVQTLTSARTPVAAPTLTLSTPVN
Sbjct: 61  RNLRSADRKNRDVPGPSTGECTRTSIAPNRCEMSFTEVQTLTSARTPVAAPTLTLSTPVN 120

Query: 258 PVSSAEMLXXXXXXXXXXXRASRSGDNDSPLLFNAYDTPQQGINXXXXXXXXXXXXPNAH 79
           PVSSAEML           RASRSGDNDSPLLFNAYDTPQQGIN            PNAH
Sbjct: 121 PVSSAEMLRVMPPRVGRRPRASRSGDNDSPLLFNAYDTPQQGINDESPTPSDSPESPNAH 180

Query: 78  LYGAXXXXXXXXXXXXXXXTRSHRH 4
           LYGA               TRSHRH
Sbjct: 181 LYGATPGNPTSTSGGPSSNTRSHRH 205




[DB home][top]