Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= B0524_3
         (615 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17551904|ref|NP_497473.1| putative nuclear protein, with a co...   247   1e-64
gi|30425098|ref|NP_780599.1| RIKEN cDNA 1700049L16 [Mus musculus...    33   5.6
gi|49093244|ref|XP_408083.1| hypothetical protein AN3946.2 [Aspe...    32   9.5
gi|34898662|ref|NP_910677.1| hypothetical protein~similar to Ory...    32   9.5
gi|11862952|dbj|BAB19333.1| hypothetical protein [Oryza sativa (...    32   9.5


>gi|17551904|ref|NP_497473.1| putative nuclear protein, with a
           coiled coil-4 domain (3C982) [Caenorhabditis elegans]
 gi|7201481|gb|AAF39750.1| Hypothetical protein B0524.5
           [Caenorhabditis elegans]
          Length = 204

 Score =  247 bits (631), Expect = 1e-64
 Identities = 139/204 (68%), Positives = 139/204 (68%)
 Frame = -1

Query: 615 MIGYFIITGFAAATLALSTCNLKKVRXXXXXXXXXXXXXXXTLKVAPRAAPPRKKKEIFL 436
           MIGYFIITGFAAATLALSTCNLKKVR               TLKVAPRAAPPRKKKEIFL
Sbjct: 1   MIGYFIITGFAAATLALSTCNLKKVRKPPPATPAKPPAPQKTLKVAPRAAPPRKKKEIFL 60

Query: 435 EEHTPPSTDTDEVSTIPPAEQIRIVENHRRRIGVRPRAGNRVYKKTPXXXXXXXXXXXXX 256
           EEHTPPSTDTDEVSTIPPAEQIRIVENHRRRIGVRPRAGNRVYKKTP
Sbjct: 61  EEHTPPSTDTDEVSTIPPAEQIRIVENHRRRIGVRPRAGNRVYKKTPSSELVKVENKKSV 120

Query: 255 XXXXXXXKTESGEAEACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKKNGSESYAYK 76
                  KTESGEAEAC                              ELKKNGSESYAYK
Sbjct: 121 EKNCKVVKTESGEAEACEKKEDKRNVEKNKKKEKESKEKSKNCYEKKELKKNGSESYAYK 180

Query: 75  KYNKQKNEHIEILVKKTVLRQIRF 4
           KYNKQKNEHIEILVKKTVLRQIRF
Sbjct: 181 KYNKQKNEHIEILVKKTVLRQIRF 204




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