Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= B0524_3
(615 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17551904|ref|NP_497473.1| putative nuclear protein, with a co... 247 1e-64
gi|30425098|ref|NP_780599.1| RIKEN cDNA 1700049L16 [Mus musculus... 33 5.6
gi|49093244|ref|XP_408083.1| hypothetical protein AN3946.2 [Aspe... 32 9.5
gi|34898662|ref|NP_910677.1| hypothetical protein~similar to Ory... 32 9.5
gi|11862952|dbj|BAB19333.1| hypothetical protein [Oryza sativa (... 32 9.5
>gi|17551904|ref|NP_497473.1| putative nuclear protein, with a
coiled coil-4 domain (3C982) [Caenorhabditis elegans]
gi|7201481|gb|AAF39750.1| Hypothetical protein B0524.5
[Caenorhabditis elegans]
Length = 204
Score = 247 bits (631), Expect = 1e-64
Identities = 139/204 (68%), Positives = 139/204 (68%)
Frame = -1
Query: 615 MIGYFIITGFAAATLALSTCNLKKVRXXXXXXXXXXXXXXXTLKVAPRAAPPRKKKEIFL 436
MIGYFIITGFAAATLALSTCNLKKVR TLKVAPRAAPPRKKKEIFL
Sbjct: 1 MIGYFIITGFAAATLALSTCNLKKVRKPPPATPAKPPAPQKTLKVAPRAAPPRKKKEIFL 60
Query: 435 EEHTPPSTDTDEVSTIPPAEQIRIVENHRRRIGVRPRAGNRVYKKTPXXXXXXXXXXXXX 256
EEHTPPSTDTDEVSTIPPAEQIRIVENHRRRIGVRPRAGNRVYKKTP
Sbjct: 61 EEHTPPSTDTDEVSTIPPAEQIRIVENHRRRIGVRPRAGNRVYKKTPSSELVKVENKKSV 120
Query: 255 XXXXXXXKTESGEAEACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKKNGSESYAYK 76
KTESGEAEAC ELKKNGSESYAYK
Sbjct: 121 EKNCKVVKTESGEAEACEKKEDKRNVEKNKKKEKESKEKSKNCYEKKELKKNGSESYAYK 180
Query: 75 KYNKQKNEHIEILVKKTVLRQIRF 4
KYNKQKNEHIEILVKKTVLRQIRF
Sbjct: 181 KYNKQKNEHIEILVKKTVLRQIRF 204