Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= B0564_3
(723 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17538326|ref|NP_502520.1| ribonuclease PH-like (26.1 kD) (4N8... 479 e-134
gi|39587718|emb|CAE58656.1| Hypothetical protein CBG01825 [Caeno... 455 e-127
gi|34866849|ref|XP_216949.2| similar to putative exosome complex... 215 6e-55
gi|9506689|ref|NP_061910.1| exosome component 4; exosome complex... 213 3e-54
gi|29611663|ref|NP_780608.1| exosome complex exonuclease RRP41 [... 213 3e-54
gi|33411774|emb|CAD58792.1| putative exosome complex exonuclease... 213 4e-54
gi|41152247|ref|NP_957033.1| putative exosome complex exonucleas... 211 9e-54
gi|24584046|ref|NP_609618.2| CG15481-PA [Drosophila melanogaster... 196 4e-49
gi|17946442|gb|AAL49254.1| RE67757p [Drosophila melanogaster] 196 4e-49
gi|47220383|emb|CAF98482.1| unnamed protein product [Tetraodon n... 189 5e-47
gi|31240059|ref|XP_320443.1| ENSANGP00000017010 [Anopheles gambi... 187 1e-46
gi|15233167|ref|NP_191721.1| exonuclease RRP41 (RRP41) [Arabidop... 167 2e-40
gi|19114994|ref|NP_594082.1| putative ribonuclease PH-like [Schi... 159 4e-38
gi|7435290|pir||T11740 hypothetical protein - fission yeast (Sch... 159 4e-38
gi|21228725|ref|NP_634647.1| Ribonuclease [Methanosarcina mazei ... 150 2e-35
gi|49073220|ref|XP_400842.1| hypothetical protein UM03227.1 [Ust... 148 1e-34
gi|46142152|ref|ZP_00204178.1| COG0689: RNase PH [Methanococcoid... 146 5e-34
gi|47848476|dbj|BAD22331.1| putative ribonuclease PH [Oryza sati... 146 5e-34
gi|11498104|ref|NP_069329.1| ribonuclease PH (rph) [Archaeoglobu... 145 1e-33
gi|48837580|ref|ZP_00294553.1| COG0689: RNase PH [Methanosarcina... 144 1e-33
gi|46444644|gb|EAL03917.1| hypothetical protein CaO19.4582 [Cand... 140 3e-32
gi|14591333|ref|NP_143411.1| hypothetical protein PH1549 [Pyroco... 140 3e-32
gi|20093819|ref|NP_613666.1| Predicted exosome subunit, RNase PH... 139 4e-32
gi|14520826|ref|NP_126301.1| ribonuclease PH [Pyrococcus abyssi ... 139 4e-32
gi|18977940|ref|NP_579297.1| ribonuclease ph [Pyrococcus furiosu... 139 8e-32
gi|15920655|ref|NP_376324.1| 247aa long hypothetical ribonucleas... 136 4e-31
gi|15897636|ref|NP_342241.1| Ribonuclease PH (rph) [Sulfolobus s... 136 5e-31
gi|50550057|ref|XP_502501.1| hypothetical protein [Yarrowia lipo... 133 3e-30
gi|15678710|ref|NP_275826.1| ribonuclease PH [Methanothermobacte... 133 3e-30
gi|50427437|ref|XP_462331.1| unnamed protein product [Debaryomyc... 131 1e-29
gi|16082286|ref|NP_394747.1| RNase PH (yeast SIK6) related prote... 131 2e-29
gi|13541138|ref|NP_110826.1| RNase PH [Thermoplasma volcanium GS... 129 8e-29
gi|14601412|ref|NP_147949.1| ribonuclease PH [Aeropyrum pernix K... 127 2e-28
gi|48477466|ref|YP_023172.1| ribonuclease PH [Picrophilus torrid... 126 4e-28
gi|46135695|ref|XP_389539.1| hypothetical protein FG09363.1 [Gib... 125 1e-27
gi|50258723|gb|EAL21408.1| hypothetical protein CNBD1030 [Crypto... 124 1e-27
gi|50307027|ref|XP_453491.1| unnamed protein product [Kluyveromy... 124 2e-27
gi|32409023|ref|XP_324992.1| hypothetical protein [Neurospora cr... 124 2e-27
gi|18313178|ref|NP_559845.1| 3' exoribonuclease family protein [... 122 1e-26
gi|38109224|gb|EAA55128.1| hypothetical protein MG06785.4 [Magna... 120 4e-26
gi|14250906|emb|CAC39258.1| Rrp41p homologue [Trypanosoma brucei] 119 5e-26
gi|48853120|ref|ZP_00307301.1| COG0689: RNase PH [Ferroplasma ac... 117 2e-25
gi|50288675|ref|XP_446767.1| unnamed protein product [Candida gl... 117 2e-25
gi|49092976|ref|XP_407949.1| hypothetical protein AN3812.2 [Aspe... 116 4e-25
gi|45185722|ref|NP_983438.1| ACR035Wp [Eremothecium gossypii] >g... 116 4e-25
gi|6321634|ref|NP_011711.1| superkiller; ExtraCellular Mutant; R... 113 4e-24
gi|23509478|ref|NP_702145.1| exosome complex exonuclease rrp41, ... 109 5e-23
gi|46226443|gb|EAK87443.1| archeo-eukaryotic exosomal RNAse, tra... 100 2e-20
gi|42567185|ref|NP_194479.2| 3' exoribonuclease family domain 1-... 100 5e-20
gi|23484066|gb|EAA19527.1| exonuclease RRP41, putative [Plasmodi... 99 7e-20
gi|21221351|ref|NP_627130.1| putative ribonuclease PH [Streptomy... 99 7e-20
gi|41351115|gb|AAH65602.1| Unknown (protein for IMAGE:6966522) [... 98 1e-19
gi|41469640|gb|AAS07363.1| putative exoribonuclease [Oryza sativ... 96 6e-19
gi|50725627|dbj|BAD33094.1| putative ribonuclease PH [Oryza sati... 94 2e-18
gi|32398930|emb|CAD98395.1| ribonuclease PH-like protein, possib... 94 2e-18
gi|41615042|ref|NP_963540.1| NEQ248 [Nanoarchaeum equitans Kin4-... 93 5e-18
gi|30794378|ref|NP_082550.1| Mtr3 (mRNA transport regulator 3)-h... 91 2e-17
gi|34851927|ref|XP_226471.2| similar to homolog of yeast mRNA tr... 91 3e-17
gi|21706518|gb|AAH34358.1| DNA segment, Chr 7, Wayne State Unive... 91 3e-17
gi|29831713|ref|NP_826347.1| putative ribonuclease PH [Streptomy... 91 3e-17
gi|20070392|ref|NP_613052.1| exosome component 5 [Mus musculus] ... 90 4e-17
gi|47210411|emb|CAF91679.1| unnamed protein product [Tetraodon n... 88 2e-16
gi|17402904|ref|NP_478126.1| homolog of yeast mRNA transport reg... 88 2e-16
gi|14043511|gb|AAH07742.1| Exosome component Rrp46 [Homo sapiens] 86 8e-16
gi|47174864|ref|NP_064543.3| exosome component Rrp46 [Homo sapie... 86 8e-16
gi|21693160|gb|AAM75154.1| chronic myelogenous leukemia tumor an... 86 8e-16
gi|38234421|ref|NP_940188.1| Putative ribonuclease PH [Corynebac... 86 1e-15
gi|20807113|ref|NP_622284.1| RNase PH [Thermoanaerobacter tengco... 83 6e-15
gi|19173205|ref|NP_597008.1| RIBONUCLEASE PH-LIKE PROTEIN [Encep... 82 1e-14
gi|48830827|ref|ZP_00287932.1| COG0689: RNase PH [Magnetococcus ... 81 2e-14
gi|46365901|ref|ZP_00228324.1| COG0689: RNase PH [Kineococcus ra... 81 2e-14
gi|29126348|gb|AAO66540.1| putative exosome component [Oryza sat... 81 2e-14
gi|27676672|ref|XP_218343.1| similar to DNA segment, Chr 7, Wayn... 80 4e-14
gi|16124407|ref|NP_418971.1| ribonuclease PH [Caulobacter cresce... 79 1e-13
gi|15231368|ref|NP_190207.1| 3' exoribonuclease family domain 1-... 78 2e-13
gi|23102645|ref|ZP_00089147.1| COG0689: RNase PH [Azotobacter vi... 77 3e-13
gi|46201192|ref|ZP_00055593.2| COG0689: RNase PH [Magnetospirill... 76 6e-13
gi|25028957|ref|NP_739011.1| putative ribonuclease [Corynebacter... 75 1e-12
gi|48860489|ref|ZP_00314414.1| COG0689: RNase PH [Clostridium th... 74 3e-12
gi|16272231|ref|NP_438442.1| ribonuclease PH [Haemophilus influe... 74 3e-12
gi|22971880|ref|ZP_00018797.1| hypothetical protein [Chloroflexu... 74 4e-12
gi|1079663|gb|AAC44429.1| RNase PH 73 5e-12
gi|45915123|ref|ZP_00193667.2| COG0689: RNase PH [Mesorhizobium ... 73 7e-12
gi|41725667|ref|ZP_00152425.1| COG0689: RNase PH [Dechloromonas ... 73 7e-12
gi|15600527|ref|NP_254021.1| ribonuclease PH [Pseudomonas aerugi... 72 9e-12
gi|23308945|ref|NP_601703.2| RNase PH [Corynebacterium glutamicu... 72 9e-12
gi|17546878|ref|NP_520280.1| PROBABLE RIBONUCLEASE PH (TRNA NUCL... 72 9e-12
gi|13473880|ref|NP_105448.1| ribonuclease PH [Mesorhizobium loti... 72 9e-12
gi|46015433|pdb|1R6L|A Chain A, Crystal Structure Of The Trna Pr... 72 1e-11
gi|39933406|ref|NP_945682.1| ribonuclease PH [Rhodopseudomonas p... 72 1e-11
gi|21232680|ref|NP_638597.1| ribonuclease PH [Xanthomonas campes... 72 1e-11
gi|50843137|ref|YP_056364.1| probable ribonuclease PH [Propionib... 71 2e-11
gi|21244122|ref|NP_643704.1| ribonuclease PH [Xanthomonas axonop... 71 2e-11
gi|49082078|gb|AAT50439.1| PA5334 [synthetic construct] 71 2e-11
gi|48784826|ref|ZP_00281131.1| COG0689: RNase PH [Burkholderia f... 71 3e-11
gi|24114912|ref|NP_709422.1| RNase PH [Shigella flexneri 2a str.... 71 3e-11
gi|48731158|ref|ZP_00264904.1| COG0689: RNase PH [Pseudomonas fl... 71 3e-11
gi|23335847|ref|ZP_00121079.1| COG0689: RNase PH [Bifidobacteriu... 71 3e-11
gi|23464887|ref|NP_695490.1| probable ribonuclease PH [Bifidobac... 71 3e-11
gi|26250289|ref|NP_756329.1| Ribonuclease PH [Escherichia coli C... 70 3e-11
gi|15827593|ref|NP_301856.1| ribonuclease PH [Mycobacterium lepr... 70 3e-11
gi|28867317|ref|NP_789936.1| ribonuclease PH [Pseudomonas syring... 70 3e-11
gi|46188609|ref|ZP_00124883.2| COG0689: RNase PH [Pseudomonas sy... 70 3e-11
gi|32035564|ref|ZP_00135495.1| COG0689: RNase PH [Actinobacillus... 70 3e-11
gi|30065081|ref|NP_839252.1| RNase PH [Shigella flexneri 2a str.... 70 3e-11
gi|16762575|ref|NP_458192.1| RNase PH [Salmonella enterica subsp... 70 4e-11
gi|15804184|ref|NP_290223.1| RNase PH [Escherichia coli O157:H7 ... 70 4e-11
gi|15964129|ref|NP_384482.1| PROBABLE RIBONUCLEASE PH PROTEIN [S... 70 6e-11
gi|42524118|ref|NP_969498.1| ribonuclease PH [Bdellovibrio bacte... 69 7e-11
gi|48837020|ref|ZP_00294015.1| COG0689: RNase PH [Thermobifida f... 69 7e-11
gi|46911839|emb|CAG18637.1| putative ribonuclease PH [Photobacte... 69 7e-11
gi|33151538|ref|NP_872891.1| ribonuclease PH; tRNA nucleotidyltr... 69 7e-11
gi|21402524|ref|NP_658509.1| RNase_PH, 3' exoribonuclease family... 69 1e-10
gi|30022573|ref|NP_834204.1| Ribonuclease PH [Bacillus cereus AT... 69 1e-10
gi|50083344|ref|YP_044854.1| ribonuclease PH (RNase PH), tRNA nu... 69 1e-10
gi|49076352|ref|XP_402164.1| hypothetical protein UM04549.1 [Ust... 69 1e-10
gi|18311236|ref|NP_563170.1| ribonuclease PH [Clostridium perfri... 69 1e-10
gi|31792536|ref|NP_855029.1| PROBABLE RIBONUCLEASE RPHA (RNase P... 69 1e-10
gi|21759411|sp|Q9AES0|RNPH_PASHA Ribonuclease PH (RNase PH) (tRN... 69 1e-10
gi|39996894|ref|NP_952845.1| ribonuclease PH [Geobacter sulfurre... 69 1e-10
gi|16131514|ref|NP_418100.1| RNase PH [Escherichia coli K12] >gn... 69 1e-10
gi|401009|sp|P03842|RNPH_ECOLI Ribonuclease PH (RNase PH) (tRNA ... 69 1e-10
gi|17988058|ref|NP_540692.1| RIBONUCLEASE PH [Brucella melitensi... 69 1e-10
gi|15608480|ref|NP_215856.1| rphA [Mycobacterium tuberculosis H3... 68 2e-10
gi|15887678|ref|NP_353359.1| AGR_C_571p [Agrobacterium tumefacie... 68 2e-10
gi|46316765|ref|ZP_00217344.1| COG0689: RNase PH [Burkholderia c... 68 2e-10
gi|17934243|ref|NP_531033.1| ribonuclease PH [Agrobacterium tume... 68 2e-10
gi|34581401|ref|ZP_00142881.1| ribonuclease PH [Rickettsia sibir... 67 3e-10
gi|27375785|ref|NP_767314.1| Ribonuclease PH [Bradyrhizobium jap... 67 3e-10
gi|24375740|ref|NP_719783.1| ribonuclease PH [Shewanella oneiden... 67 4e-10
gi|41408520|ref|NP_961356.1| RphA [Mycobacterium avium subsp. pa... 67 4e-10
gi|30248295|ref|NP_840365.1| 3' exoribonuclease family [Nitrosom... 67 4e-10
gi|23467185|ref|ZP_00122769.1| COG0689: RNase PH [Haemophilus so... 67 4e-10
gi|32029658|ref|ZP_00132652.1| COG0689: RNase PH [Haemophilus so... 67 4e-10
gi|15603741|ref|NP_246815.1| Rph [Pasteurella multocida Pm70] >g... 67 4e-10
gi|21759419|sp|Q9KVD6|RNPH_VIBCH Ribonuclease PH (RNase PH) (tRN... 67 4e-10
gi|15640240|ref|NP_229867.1| ribonuclease PH [Vibrio cholerae O1... 67 4e-10
gi|15892898|ref|NP_360612.1| ribonuclease PH [EC:2.7.7.56] [Rick... 67 5e-10
gi|46318852|ref|ZP_00219281.1| COG0689: RNase PH [Burkholderia c... 67 5e-10
gi|27364280|ref|NP_759808.1| RNase PH [Vibrio vulnificus CMCP6] ... 67 5e-10
gi|46141333|ref|ZP_00146564.2| COG0689: RNase PH [Psychrobacter ... 67 5e-10
gi|50255708|gb|EAL18440.1| hypothetical protein CNBJ0820 [Crypto... 67 5e-10
gi|26991970|ref|NP_747395.1| ribonuclease PH [Pseudomonas putida... 66 6e-10
gi|23501084|ref|NP_697211.1| ribonuclease PH [Brucella suis 1330... 66 6e-10
gi|28493589|ref|NP_787750.1| ribonuclease PH [Tropheryma whipple... 66 6e-10
gi|48766668|ref|ZP_00271218.1| COG0689: RNase PH [Rhodospirillum... 66 8e-10
gi|15604475|ref|NP_220993.1| RIBONUCLEASE PH (rph) [Rickettsia p... 66 8e-10
gi|28896951|ref|NP_796556.1| ribonuclease PH [Vibrio parahaemoly... 66 8e-10
gi|19113410|ref|NP_596618.1| low similarity to ribonuclease ph-l... 66 8e-10
gi|16803278|ref|NP_464763.1| similar to ribonuclease PH [Listeri... 65 1e-09
gi|39579728|emb|CAE56478.1| Hypothetical protein CBG24192 [Caeno... 65 1e-09
gi|24667071|ref|NP_649157.1| CG8025-PA [Drosophila melanogaster]... 65 1e-09
gi|16120397|ref|NP_403710.1| ribonuclease PH [Yersinia pestis] >... 65 1e-09
gi|48862454|ref|ZP_00316350.1| COG0689: RNase PH [Microbulbifer ... 65 1e-09
gi|47097379|ref|ZP_00234931.1| ribonuclease PH [Listeria monocyt... 65 1e-09
gi|17531759|ref|NP_496284.1| ribonuclease (23.0 kD) (2K883) [Cae... 65 1e-09
gi|76247|pir||QQECPE tRNA nucleotidyltransferase (EC 2.7.7.56) -... 65 1e-09
gi|37928172|pdb|1UDS|A Chain A, Crystal Structure Of The Trna Pr... 65 1e-09
gi|33597539|ref|NP_885182.1| ribonuclease PH [Bordetella paraper... 65 2e-09
gi|38111100|gb|EAA56729.1| hypothetical protein MG07084.4 [Magna... 65 2e-09
gi|48859197|ref|ZP_00313135.1| COG1185: Polyribonucleotide nucle... 65 2e-09
gi|15838106|ref|NP_298794.1| ribonuclease PH [Xylella fastidiosa... 65 2e-09
gi|39597415|emb|CAE59645.1| Hypothetical protein CBG03059 [Caeno... 65 2e-09
gi|50509724|dbj|BAD31776.1| putative polynucleotide phosphorylas... 65 2e-09
gi|48770951|ref|ZP_00275294.1| COG0689: RNase PH [Ralstonia meta... 65 2e-09
gi|50119101|ref|YP_048268.1| ribonuclease PH [Erwinia carotovora... 65 2e-09
gi|992693|gb|AAB01514.1| RNase PH [Caulobacter crescentus] 65 2e-09
gi|15606253|ref|NP_213631.1| RNase PH [Aquifex aeolicus VF5] >gn... 65 2e-09
gi|33592677|ref|NP_880321.1| ribonuclease PH [Bordetella pertuss... 64 2e-09
gi|22994649|ref|ZP_00039145.1| COG0689: RNase PH [Xylella fastid... 64 2e-09
gi|37928170|pdb|1UDQ|A Chain A, Crystal Structure Of The Trna Pr... 64 3e-09
gi|50409618|ref|XP_456890.1| unnamed protein product [Debaryomyc... 64 4e-09
gi|25152573|ref|NP_497279.2| actin Related protein 2/3 compleX c... 64 4e-09
gi|34499302|ref|NP_903517.1| tRNA nucleotidyltransferase [Chromo... 64 4e-09
gi|37928168|pdb|1UDO|A Chain A, Crystal Structure Of The Trna Pr... 64 4e-09
gi|15794595|ref|NP_284417.1| ribonuclease PH [Neisseria meningit... 63 5e-09
gi|39586040|emb|CAE69116.1| Hypothetical protein CBG15142 [Caeno... 63 5e-09
gi|37528679|ref|NP_932024.1| ribonuclease PH (RNase PH) (tRNA nu... 63 7e-09
gi|49089068|ref|XP_406290.1| hypothetical protein AN2153.2 [Aspe... 63 7e-09
gi|15241441|ref|NP_196962.1| polyribonucleotide nucleotidyltrans... 63 7e-09
gi|23099561|ref|NP_693027.1| ribonuclease PH [Oceanobacillus ihe... 63 7e-09
gi|25956134|emb|CAD58326.1| Ribonuclease PH [Azoarcus sp. EbN1] 62 9e-09
gi|27528790|emb|CAD29620.1| hypothetical protein [Streptomyces o... 62 9e-09
gi|15677352|ref|NP_274507.1| ribonuclease PH [Neisseria meningit... 62 1e-08
gi|25145055|ref|NP_497324.2| polyribonucleotide nucleotidyltrans... 62 1e-08
gi|47573549|ref|ZP_00243587.1| COG0689: RNase PH [Rubrivivax gel... 62 1e-08
gi|16800270|ref|NP_470538.1| similar to ribonuclease PH [Listeri... 62 1e-08
gi|19705156|ref|NP_602651.1| Ribonuclease PH; nucleoside-triphos... 62 2e-08
gi|26452638|dbj|BAC43402.1| unknown protein [Arabidopsis thaliana] 62 2e-08
gi|32416508|ref|XP_328732.1| hypothetical protein [Neurospora cr... 61 2e-08
gi|46116870|ref|XP_384453.1| hypothetical protein FG04277.1 [Gib... 61 2e-08
gi|46191758|ref|ZP_00007993.2| COG0689: RNase PH [Rhodobacter sp... 61 3e-08
gi|48848719|ref|ZP_00302964.1| COG0689: RNase PH [Novosphingobiu... 61 3e-08
gi|50288139|ref|XP_446498.1| unnamed protein product [Candida gl... 61 3e-08
gi|29375698|ref|NP_814852.1| ribonuclease PH/Ham1 protein [Enter... 61 3e-08
gi|49236849|ref|ZP_00330905.1| COG0689: RNase PH [Moorella therm... 60 3e-08
gi|50556492|ref|XP_505654.1| hypothetical protein [Yarrowia lipo... 60 3e-08
gi|47168526|pdb|1OYS|A Chain A, Crystal Structure Of The Phospho... 60 6e-08
gi|34763588|ref|ZP_00144521.1| RIBONUCLEASE PH; NUCLEOSIDE-TRIPH... 60 6e-08
gi|15644097|ref|NP_229146.1| polynucleotide phosphorylase [Therm... 59 8e-08
gi|50311745|ref|XP_455901.1| unnamed protein product [Kluyveromy... 59 1e-07
gi|16078732|ref|NP_389551.1| polynucleotide phosphorylase (PNPas... 59 1e-07
gi|15615630|ref|NP_243934.1| ribonuclease PH [Bacillus haloduran... 59 1e-07
gi|16079889|ref|NP_390715.1| ribonuclease PH [Bacillus subtilis ... 59 1e-07
gi|21282886|ref|NP_645974.1| polyribonucleotide nucleotidyltrans... 59 1e-07
gi|49483437|ref|YP_040661.1| polyribonucleotide nucleotidyltrans... 59 1e-07
gi|15924264|ref|NP_371798.1| polyribonucleotide nucleotidyltrans... 59 1e-07
gi|7413616|emb|CAB85703.1| putative polynucleotide phosphorylase... 58 2e-07
gi|30678905|ref|NP_187021.2| polyribonucleotide nucleotidyltrans... 58 2e-07
gi|6006870|gb|AAF00646.1| putative polynucleotide phosphorylase ... 58 2e-07
gi|12848640|dbj|BAB28033.1| unnamed protein product [Mus musculus] 58 2e-07
gi|1723689|sp|P53256|RR46_YEAST Exosome complex exonuclease RRP4... 58 2e-07
gi|47847669|dbj|BAD21450.1| putative polyribonucleotide nucleoti... 58 2e-07
gi|2129483|pir||S64680 exoribonuclease 100 RNP - spinach 58 2e-07
gi|1588265|prf||2208281A 100RNP protein 58 2e-07
gi|46201049|ref|ZP_00055817.2| COG1185: Polyribonucleotide nucle... 58 2e-07
gi|1924972|gb|AAC49669.1| polyribonucleotide phophorylase 58 2e-07
gi|19112052|ref|NP_595260.1| hypothetical protein [Schizosacchar... 57 3e-07
gi|322197|pir||A44914 tRNA nucleotidyltransferase (EC 2.7.7.56) ... 57 3e-07
gi|29653650|ref|NP_819342.1| ribonuclease PH [Coxiella burnetii ... 57 3e-07
gi|31198127|ref|XP_308011.1| ENSANGP00000019439 [Anopheles gambi... 57 3e-07
gi|48825122|ref|ZP_00286408.1| COG0689: RNase PH [Enterococcus f... 57 4e-07
gi|46226980|gb|EAK87946.1| RPR46-like RNAse PH domain [Cryptospo... 57 4e-07
gi|39996693|ref|NP_952644.1| polyribonucleotide nucleotidyltrans... 57 4e-07
gi|42520733|ref|NP_966648.1| polyribonucleotide nucleotidyltrans... 57 4e-07
gi|15806593|ref|NP_295308.1| ribonuclease PH [Deinococcus radiod... 57 4e-07
gi|21759423|sp|Q9X528|RNPH_LEGPN Ribonuclease PH (RNase PH) (tRN... 57 4e-07
gi|7488820|pir||T06540 polyribonucleotide nucleotidyltransferase... 57 5e-07
gi|18310662|ref|NP_562596.1| polyribonucleotide nucleotidyltrans... 56 6e-07
gi|46135257|ref|ZP_00162619.2| COG0689: RNase PH [Anabaena varia... 56 6e-07
gi|22299736|ref|NP_682983.1| polyribonucleotide nucleotidyltrans... 56 6e-07
gi|50307491|ref|XP_453725.1| unnamed protein product [Kluyveromy... 56 6e-07
gi|25188204|ref|NP_082145.1| polynucleotide phosphorylase; 3'-5'... 56 8e-07
gi|33944337|ref|XP_340316.1| ribosomal RNA processing protein RR... 56 8e-07
gi|27467869|ref|NP_764506.1| polyribonucleotide nucleotidyltrans... 56 8e-07
gi|45516758|ref|ZP_00168310.1| COG0689: RNase PH [Ralstonia eutr... 56 8e-07
gi|28174955|gb|AAH27228.2| Pnpt1 protein [Mus musculus] 56 8e-07
gi|48894082|ref|ZP_00327280.1| COG1185: Polyribonucleotide nucle... 55 1e-06
gi|50738289|ref|XP_419282.1| PREDICTED: similar to polyribonucle... 55 1e-06
gi|46112873|ref|ZP_00181963.2| COG1185: Polyribonucleotide nucle... 55 1e-06
gi|17227565|ref|NP_484113.1| ribonuclease PH [Nostoc sp. PCC 712... 55 1e-06
gi|34879610|ref|XP_341267.1| similar to polynucleotide phosphory... 55 1e-06
gi|29377522|ref|NP_816676.1| polyribonucleotide nucleotidyltrans... 55 1e-06
gi|15614970|ref|NP_243273.1| polynucleotide phosphorylase [Bacil... 55 1e-06
gi|47569084|ref|ZP_00239773.1| polyribonucleotide nucleotidyltra... 55 1e-06
gi|21401790|ref|NP_657775.1| RNase_PH, 3' exoribonuclease family... 55 1e-06
gi|42782895|ref|NP_980142.1| polyribonucleotide nucleotidyltrans... 55 1e-06
gi|37362654|ref|NP_011609.2| Ribosomal RNA Processing; Rrp46p [S... 55 1e-06
gi|12835817|dbj|BAB23374.1| unnamed protein product [Mus musculus] 55 2e-06
gi|16329253|ref|NP_439981.1| polyribonucleotide nucleotidyltrans... 55 2e-06
gi|50552404|ref|XP_503612.1| hypothetical protein [Yarrowia lipo... 55 2e-06
gi|16800436|ref|NP_470704.1| polynucleotide phosphorylase (PNPas... 55 2e-06
gi|16803371|ref|NP_464856.1| polynucleotide phosphorylase (PNPas... 55 2e-06
gi|46907557|ref|YP_013946.1| polyribonucleotide nucleotidyltrans... 55 2e-06
gi|48856376|ref|ZP_00310533.1| COG1185: Polyribonucleotide nucle... 54 2e-06
gi|30021896|ref|NP_833527.1| Polyribonucleotide nucleotidyltrans... 54 2e-06
gi|49235196|ref|ZP_00329268.1| COG1185: Polyribonucleotide nucle... 54 2e-06
gi|28193987|gb|AAO33354.1| polynucleotide phosphorylase [Mus mus... 54 3e-06
gi|42523058|ref|NP_968438.1| polyribonucleotide nucleotidyltrans... 54 3e-06
gi|50876162|emb|CAG36002.1| probable ribonuclease PH [Desulfotal... 54 4e-06
gi|48824146|ref|ZP_00285564.1| COG1185: Polyribonucleotide nucle... 53 5e-06
gi|45526766|ref|ZP_00177969.1| COG1185: Polyribonucleotide nucle... 53 5e-06
gi|28871621|ref|NP_794240.1| polyribonucleotide nucleotidyltrans... 53 5e-06
gi|23470960|ref|ZP_00126292.1| COG1185: Polyribonucleotide nucle... 53 5e-06
gi|48732412|ref|ZP_00266155.1| COG1185: Polyribonucleotide nucle... 53 5e-06
gi|33240756|ref|NP_875698.1| Ribonuclease PH [Prochlorococcus ma... 53 5e-06
gi|45198627|ref|NP_985656.1| AFR109Wp [Eremothecium gossypii] >g... 53 5e-06
gi|24308348|ref|NP_149100.1| polyribonucleotide nucleotidyltrans... 53 7e-06
gi|24943088|gb|AAK13047.1| 3'-5' RNA exonuclease [Homo sapiens] 53 7e-06
gi|16183595|gb|AAL13710.1| GM01970p [Drosophila melanogaster] 53 7e-06
gi|23124523|ref|ZP_00106507.1| COG0689: RNase PH [Nostoc punctif... 53 7e-06
gi|8928246|sp|O87792|PNP_PSEPU Polyribonucleotide nucleotidyltra... 53 7e-06
gi|26991392|ref|NP_746817.1| polyribonucleotide nucleotidyltrans... 53 7e-06
gi|50842950|ref|YP_056177.1| polyribonucleotide nucleotidyltrans... 53 7e-06
gi|16768780|gb|AAL28609.1| LD03255p [Drosophila melanogaster] 52 9e-06
gi|23099059|ref|NP_692525.1| polyribonucleotide nucleotidyltrans... 52 9e-06
gi|24651641|ref|NP_651867.2| CG11337-PA [Drosophila melanogaster... 52 9e-06
gi|25012192|gb|AAN71212.1| GM16802p [Drosophila melanogaster] 52 9e-06
gi|21674467|ref|NP_662532.1| polyribonucleotide nucleotidyltrans... 52 9e-06
gi|46199080|ref|YP_004747.1| polynucleotide phosphorylase [Therm... 52 9e-06
gi|34580431|ref|ZP_00141911.1| polyribonucleotide nucleotidyltra... 52 9e-06
gi|17231888|ref|NP_488436.1| polyribonucleotide nucleotidyltrans... 52 1e-05
gi|45509695|ref|ZP_00162028.1| COG1185: Polyribonucleotide nucle... 52 1e-05
gi|20807834|ref|NP_623005.1| Polyribonucleotide nucleotidyltrans... 52 1e-05
gi|15834850|ref|NP_296609.1| polyribonucleotide nucleotidyltrans... 52 1e-05
gi|15604364|ref|NP_220880.1| POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANS... 52 1e-05
gi|15605577|ref|NP_220363.1| Polyribonucleotide Nucleotidyltrans... 52 1e-05
gi|19553179|ref|NP_601181.1| polyribonucleotide nucleotidyltrans... 52 1e-05
gi|25028424|ref|NP_738478.1| putative guanosine pentaphosphate s... 52 2e-05
gi|28210966|ref|NP_781910.1| polyribonucleotide nucleotidyltrans... 52 2e-05
gi|15895084|ref|NP_348433.1| Polyribonucleotide nucleotidyltrans... 52 2e-05
gi|33861747|ref|NP_893308.1| polyribonucleotide nucleotidyltrans... 52 2e-05
gi|33864812|ref|NP_896371.1| ribonuclease PH [Synechococcus sp. ... 51 2e-05
gi|47210410|emb|CAF91678.1| unnamed protein product [Tetraodon n... 51 2e-05
gi|24645688|ref|NP_650001.2| CG4043-PA [Drosophila melanogaster]... 51 2e-05
gi|46130513|ref|ZP_00165414.2| COG1185: Polyribonucleotide nucle... 51 2e-05
gi|24213647|ref|NP_711128.1| Polyribonucleotide nucleotidyltrans... 51 2e-05
gi|23104768|ref|ZP_00091228.1| COG1185: Polyribonucleotide nucle... 51 3e-05
gi|41408989|ref|NP_961825.1| GpsI [Mycobacterium avium subsp. pa... 51 3e-05
gi|15892586|ref|NP_360300.1| polyribonucleotide nucleotidyltrans... 51 3e-05
gi|48139229|ref|XP_396984.1| similar to polynucleotide phosphory... 50 4e-05
gi|24372791|ref|NP_716833.1| polyribonucleotide nucleotidyltrans... 50 4e-05
gi|15599934|ref|NP_253428.1| polyribonucleotide nucleotidyltrans... 50 4e-05
gi|39938737|ref|NP_950503.1| polyribonucleotide nucleotidyltrans... 50 4e-05
gi|8102038|gb|AAF72714.1| ribonuclease PH [Carnobacterium sp. St2] 50 4e-05
gi|33863644|ref|NP_895204.1| polyribonucleotide nucleotidyltrans... 50 4e-05
gi|29654180|ref|NP_819872.1| polyribonucleotide nucleotidyltrans... 50 5e-05
gi|38234048|ref|NP_939815.1| guanosine pentaphosphate synthetase... 50 5e-05
gi|42632644|gb|AAS22253.1| polynucleotide phosphorylase [Aster y... 50 5e-05
gi|15595150|ref|NP_212939.1| polyribonucleotide nucleotidyltrans... 50 5e-05
gi|48766529|ref|ZP_00271079.1| COG1185: Polyribonucleotide nucle... 50 5e-05
gi|15616978|ref|NP_240191.1| polyribonucleotide nucleotidyltrans... 50 6e-05
gi|15887437|ref|NP_353118.1| AGR_C_124p [Agrobacterium tumefacie... 50 6e-05
gi|23124138|ref|ZP_00106148.1| COG1185: Polyribonucleotide nucle... 50 6e-05
gi|15605776|ref|NP_213153.1| polyribonucleotide nucleotidyltrans... 50 6e-05
gi|22536387|ref|NP_687238.1| polyribonucleotide nucleotidyltrans... 50 6e-05
gi|23113751|ref|ZP_00099101.1| COG1185: Polyribonucleotide nucle... 50 6e-05
gi|22298135|ref|NP_681382.1| ribonuclease PH [Thermosynechococcu... 49 8e-05
gi|46132516|ref|ZP_00171021.2| COG1185: Polyribonucleotide nucle... 49 8e-05
gi|48770882|ref|ZP_00275225.1| COG1185: Polyribonucleotide nucle... 49 8e-05
gi|46308430|ref|ZP_00210623.1| COG1185: Polyribonucleotide nucle... 49 8e-05
gi|48848428|ref|ZP_00302674.1| COG1185: Polyribonucleotide nucle... 49 8e-05
gi|32473863|ref|NP_866857.1| ribonuclease PH [Pirellula sp. 1] >... 49 8e-05
gi|50590452|ref|ZP_00331832.1| COG1185: Polyribonucleotide nucle... 49 8e-05
gi|27375890|ref|NP_767419.1| polyribonucleotide nucleotidyltrans... 49 1e-04
gi|23473664|ref|ZP_00128960.1| COG1185: Polyribonucleotide nucle... 49 1e-04
gi|46912242|emb|CAG19037.1| putative polyribonucleotide nucleoti... 49 1e-04
gi|17546786|ref|NP_520188.1| PROBABLE POLYRIBONUCLEOTIDE NUCLEOT... 49 1e-04
gi|49473865|ref|YP_031907.1| Polyribonucleotide nucleotidyltrans... 49 1e-04
gi|15609920|ref|NP_217299.1| gpsI [Mycobacterium tuberculosis H3... 49 1e-04
gi|8928245|sp|O34275|PNP_YEREN Polyribonucleotide nucleotidyltra... 49 1e-04
gi|33332421|gb|AAQ11418.1| PNPase [Yersinia enterocolitica] 49 1e-04
gi|24378670|ref|NP_720625.1| polyribonucleotide nucleotidyltrans... 49 1e-04
gi|2462716|emb|CAA71697.1| pnp [Yersinia enterocolitica] 49 1e-04
gi|25010273|ref|NP_734668.1| polynucleotide phosphorylase, alpha... 49 1e-04
gi|23336421|ref|ZP_00121639.1| COG1185: Polyribonucleotide nucle... 49 1e-04
gi|15827380|ref|NP_301643.1| putative polyribonucleotide phospho... 48 2e-04
gi|49475022|ref|YP_033063.1| Polyribonucleotide nucleotidyltrans... 48 2e-04
gi|39933509|ref|NP_945785.1| polyribonucleotide nucleotidyltrans... 48 2e-04
gi|11279138|pir||T44900 probable polyribonucleotide nucleotidylt... 48 2e-04
gi|15640667|ref|NP_230296.1| polyribonucleotide nucleotidyltrans... 48 2e-04
gi|48784235|ref|ZP_00280601.1| COG1185: Polyribonucleotide nucle... 48 2e-04
gi|46431926|gb|EAK91443.1| hypothetical protein CaO19.7801 [Cand... 48 2e-04
gi|13474634|ref|NP_106203.1| polyribonucleotide nucleotidyltrans... 48 2e-04
gi|19746859|ref|NP_607995.1| putative polynucleotide phosphoryla... 48 2e-04
gi|33602856|ref|NP_890416.1| polyribonucleotide nucleotidyltrans... 47 3e-04
gi|33591966|ref|NP_879610.1| polyribonucleotide nucleotidyltrans... 47 3e-04
gi|16123636|ref|NP_406949.1| polyribonucleotide nucleotidyltrans... 47 3e-04
gi|15963997|ref|NP_384350.1| PROBABLE POLYRIBONUCLEOTIDE NUCLEOT... 47 3e-04
gi|50083658|ref|YP_045168.1| polyribonucleotide nucleotidyltrans... 47 3e-04
gi|29347973|ref|NP_811476.1| polyribonucleotide nucleotidyltrans... 47 3e-04
gi|33866429|ref|NP_897988.1| polyribonucleotide nucleotidyltrans... 47 3e-04
gi|22124608|ref|NP_668031.1| polynucleotide phosphorylase [Yersi... 47 3e-04
gi|45915186|ref|ZP_00193743.2| COG1185: Polyribonucleotide nucle... 47 3e-04
gi|46108418|ref|XP_381267.1| hypothetical protein FG01091.1 [Gib... 47 3e-04
gi|48861808|ref|ZP_00315707.1| COG1185: Polyribonucleotide nucle... 47 3e-04
gi|17988244|ref|NP_540878.1| POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANS... 47 4e-04
gi|23503016|ref|NP_699143.1| polyribonucleotide nucleotidyltrans... 47 4e-04
gi|46319551|ref|ZP_00219955.1| COG1185: Polyribonucleotide nucle... 47 4e-04
gi|46311354|ref|ZP_00211962.1| COG1185: Polyribonucleotide nucle... 47 4e-04
gi|21243412|ref|NP_642994.1| polynucleotide phosphorylase [Xanth... 47 4e-04
gi|37528344|ref|NP_931689.1| polyribonucleotide nucleotidyltrans... 47 4e-04
gi|15675748|ref|NP_269922.1| putative polynucleotide phosphoryla... 47 4e-04
gi|21911212|ref|NP_665480.1| putative polynucleotide phosphoryla... 47 4e-04
gi|34540549|ref|NP_905028.1| polyribonucleotide nucleotidyltrans... 47 4e-04
gi|49073021|ref|XP_400760.1| hypothetical protein UM03145.1 [Ust... 47 5e-04
gi|27904826|ref|NP_777952.1| polyribonucleotide nucleotidyltrans... 47 5e-04
gi|19074636|ref|NP_586142.1| BELONGS TO THE RNASE PH (EXOSOME) F... 47 5e-04
gi|48891462|ref|ZP_00324969.1| COG0689: RNase PH [Trichodesmium ... 46 7e-04
gi|37680881|ref|NP_935490.1| polyribonucleotide nucleotidyltrans... 46 7e-04
gi|45184858|ref|NP_982576.1| AAR035Cp [Eremothecium gossypii] >g... 46 7e-04
gi|16124290|ref|NP_418854.1| polyribonucleotide nucleotidyltrans... 46 7e-04
gi|27365068|ref|NP_760596.1| Polyribonucleotide nucleotidyltrans... 46 7e-04
gi|730350|sp|P41121|PNP_PHOLU Polyribonucleotide nucleotidyltran... 46 7e-04
gi|46431941|gb|EAK91457.1| hypothetical protein CaO19.168 [Candi... 46 7e-04
gi|28899226|ref|NP_798831.1| polyribonucleotide nucleotidyltrans... 46 7e-04
gi|42526551|ref|NP_971649.1| polyribonucleotide nucleotidyltrans... 46 7e-04
gi|46446277|ref|YP_007642.1| probable polyribonucleotide nucleot... 46 9e-04
gi|15792577|ref|NP_282400.1| polyribonucleotide nucleotidyltrans... 46 9e-04
gi|6015743|emb|CAB57570.1| hypothetical protein [Sulfolobus solf... 46 9e-04
gi|7486259|pir||T08941 hypothetical protein F27G19.90 - Arabidop... 46 9e-04
gi|21672636|ref|NP_660703.1| polyribonucleotide nucleotidyltrans... 46 9e-04
gi|21231940|ref|NP_637857.1| polynucleotide phosphorylase [Xanth... 46 9e-04
gi|50119663|ref|YP_048830.1| polyribonucleotide nucleotidyltrans... 46 9e-04
gi|15029403|gb|AAK81870.1| polynucleotide phosphorylase [Salmone... 46 9e-04
gi|16766580|ref|NP_462195.1| polynucleotide phosphorylase [Salmo... 46 9e-04
gi|16762047|ref|NP_457664.1| polynucleotide phosphorylase [Salmo... 46 9e-04
gi|24114455|ref|NP_708965.1| polynucleotide phosphorylase; cytid... 45 0.001
gi|26249747|ref|NP_755787.1| Polyribonucleotide nucleotidyltrans... 45 0.001
gi|30064504|ref|NP_838675.1| polynucleotide phosphorylase [Shige... 45 0.001
gi|7447094|pir||H65106 polyribonucleotide nucleotidyltransferase... 45 0.001
gi|15803706|ref|NP_289740.1| polynucleotide phosphorylase; cytid... 45 0.001
gi|49176320|ref|NP_417633.3| polynucleotide phosphorylase; cytid... 45 0.001
gi|25136928|emb|CAD56698.1| exosome-associated protein 4 [Trypan... 45 0.001
gi|1172545|sp|P05055|PNP_ECOLI Polyribonucleotide nucleotidyltra... 45 0.001
gi|50877497|emb|CAG37337.1| probable polyribonucleotide nucleoti... 45 0.001
gi|34557289|ref|NP_907104.1| NUCLEOTIDYLTRANSFERASE [Wolinella s... 45 0.001
gi|45512633|ref|ZP_00164199.1| COG0689: RNase PH [Synechococcus ... 45 0.001
gi|32490971|ref|NP_871225.1| pnp [Wigglesworthia glossinidia end... 45 0.001
gi|37522718|ref|NP_926095.1| polyribonucleotide nucleotidyltrans... 45 0.001
gi|34496921|ref|NP_901136.1| polyribonucleotide nucleotidyltrans... 45 0.001
gi|15807057|ref|NP_295786.1| polynucleotide phosphorylase [Deino... 45 0.001
gi|38099358|gb|EAA46715.1| hypothetical protein MG09936.4 [Magna... 45 0.002
gi|30248196|ref|NP_840266.1| pnp; polyribonucleotide nucleotidyl... 45 0.002
gi|15678709|ref|NP_275825.1| conserved protein [Methanothermobac... 45 0.002
gi|32034381|ref|ZP_00134571.1| COG1185: Polyribonucleotide nucle... 45 0.002
gi|1945337|emb|CAA97223.1| unnamed protein product [Saccharomyce... 44 0.003
gi|48833185|ref|ZP_00290207.1| COG1185: Polyribonucleotide nucle... 44 0.003
gi|33152626|ref|NP_873979.1| polyribonucleotide nucleotidyltrans... 44 0.003
gi|29840519|ref|NP_829625.1| polyribonucleotide nucleotidyltrans... 44 0.003
gi|19705029|ref|NP_602524.1| Polyribonucleotide nucleotidyltrans... 44 0.003
gi|15902560|ref|NP_358110.1| Polyribonucleotide nucleotidyltrans... 44 0.003
gi|15900497|ref|NP_345101.1| polyribonucleotide nucleotidyltrans... 44 0.003
gi|551833|gb|AAA83905.1| polynucleotide phosphorilase 44 0.003
gi|15639871|ref|NP_219321.1| polyribonucleotide nucleotidyltrans... 44 0.004
gi|15836844|ref|NP_297532.1| polynucleotide phosphorylase [Xylel... 44 0.004
gi|28198126|ref|NP_778440.1| polynucleotide phosphorylase [Xylel... 44 0.004
gi|15602979|ref|NP_246051.1| Pnp [Pasteurella multocida Pm70] >g... 44 0.004
gi|50258761|gb|EAL21446.1| hypothetical protein CNBD1410 [Crypto... 44 0.004
gi|22994198|ref|ZP_00038712.1| COG1185: Polyribonucleotide nucle... 44 0.004
gi|22997358|ref|ZP_00041591.1| COG1185: Polyribonucleotide nucle... 44 0.004
gi|6321597|ref|NP_011674.1| Involved in mRNA transport; Mtr3p [S... 44 0.004
gi|7716531|gb|AAF68421.1| polynucleotide phosphorylase [Pasteure... 44 0.004
gi|33242368|ref|NP_877309.1| polyribonucleotide nucleotidyltrans... 43 0.006
gi|15618907|ref|NP_225193.1| Polyribonucleotide Nucleotidyltrans... 43 0.006
gi|33519583|ref|NP_878415.1| polynucleotide phosphorylase, membe... 43 0.006
gi|46141574|ref|ZP_00146865.2| COG1185: Polyribonucleotide nucle... 43 0.006
gi|47574921|ref|ZP_00244956.1| COG1185: Polyribonucleotide nucle... 43 0.007
gi|34763065|ref|ZP_00144038.1| Polyribonucleotide nucleotidyltra... 42 0.010
gi|23593292|ref|NP_473011.2| hypothetical protein [Plasmodium fa... 42 0.010
gi|28493388|ref|NP_787549.1| polyribonucleotide nucleotidyltrans... 42 0.010
gi|28572501|ref|NP_789281.1| mRNA processing exonuclease [Trophe... 42 0.010
gi|15673837|ref|NP_268012.1| polyribonucleotide nucleotidyltrans... 42 0.013
gi|22958221|ref|ZP_00005897.1| COG1185: Polyribonucleotide nucle... 42 0.013
gi|16272192|ref|NP_438401.1| polynucleotide phosphorylase [Haemo... 42 0.013
gi|42629682|ref|ZP_00155227.1| COG1185: Polyribonucleotide nucle... 42 0.013
gi|42630532|ref|ZP_00156071.1| COG1185: Polyribonucleotide nucle... 42 0.013
gi|15793926|ref|NP_283748.1| putative polyribonucleotide nucleot... 42 0.017
gi|47218201|emb|CAF97065.1| unnamed protein product [Tetraodon n... 42 0.017
gi|3970797|emb|CAA74099.1| polynucleotide phosphorylase [Staphyl... 42 0.017
gi|12001940|gb|AAG43113.1| polynucleotide phosphorylase A; PnpA ... 41 0.022
gi|14042110|dbj|BAB55109.1| unnamed protein product [Homo sapiens] 41 0.022
gi|32473910|ref|NP_866904.1| polyribonucleotide nucleotidyltrans... 41 0.022
gi|23466837|ref|ZP_00122424.1| COG1185: Polyribonucleotide nucle... 41 0.028
gi|39585318|emb|CAE61640.1| Hypothetical protein CBG05573 [Caeno... 40 0.048
gi|23491125|gb|EAA22735.1| hypothetical protein [Plasmodium yoel... 40 0.063
gi|32420521|ref|XP_330704.1| predicted protein [Neurospora crass... 40 0.063
gi|15676656|ref|NP_273800.1| polyribonucleotide nucleotidyltrans... 39 0.082
gi|46229803|gb|EAK90621.1| RRP45-like archaeo-eukaryotic exosoma... 39 0.082
gi|3341558|emb|CAA13123.1| z11f [Vibrio cholerae] 39 0.11
gi|50286799|ref|XP_445829.1| unnamed protein product [Candida gl... 39 0.11
gi|46106240|ref|ZP_00186834.2| COG1185: Polyribonucleotide nucle... 39 0.11
gi|18313177|ref|NP_559844.1| 3' exoribonuclease family protein [... 39 0.14
gi|50418995|ref|XP_458018.1| unnamed protein product [Debaryomyc... 39 0.14
gi|50234089|ref|YP_052716.1| cox1-i5 protein [Candida stellata] ... 38 0.24
gi|15920654|ref|NP_376323.1| 275aa long conserved hypothetical p... 37 0.31
gi|49114791|gb|AAH72749.1| Unknown (protein for MGC:79114) [Xeno... 37 0.53
gi|40538738|ref|NP_066971.1| zinc finger protein 273 [Homo sapie... 36 0.69
gi|7500225|pir||T21601 hypothetical protein F31D4.1 - Caenorhabd... 35 1.2
gi|2815604|gb|AAC39558.1| Opa-interacting protein OIP2 [Homo sap... 35 1.2
gi|32044081|ref|ZP_00141182.1| COG1185: Polyribonucleotide nucle... 35 1.2
gi|31415882|ref|NP_852480.1| exosome component 8; Opa-interactin... 35 1.2
gi|32566065|ref|NP_508024.2| 3' exoribonuclease (33.9 kD) (5V311... 35 1.2
gi|29249690|gb|EAA41196.1| GLP_28_7786_6854 [Giardia lamblia ATC... 35 1.5
gi|48868083|ref|ZP_00321470.1| COG1185: Polyribonucleotide nucle... 35 1.5
gi|5729864|ref|NP_006611.1| HBS1-like; HBS1 (S. cerevisiae)-like... 35 1.5
gi|46203340|ref|ZP_00051652.2| COG1185: Polyribonucleotide nucle... 34 3.4
gi|7494363|pir||A71615 probable integral membrane protein PFB041... 34 3.4
gi|32189700|ref|NP_859429.1| leucine rich repeat protein 1 [Leis... 34 3.4
gi|37523016|ref|NP_926393.1| hypothetical protein gll3447 [Gloeo... 34 3.4
gi|34787346|dbj|BAC87791.1| polynucleotide phosphorylase [Strept... 33 4.5
gi|49078716|ref|XP_403083.1| hypothetical protein UM05468.1 [Ust... 33 4.5
gi|29245083|gb|EAA36744.1| GLP_83_5565_6509 [Giardia lamblia ATC... 33 4.5
gi|39591053|emb|CAE58833.1| Hypothetical protein CBG02045 [Caeno... 33 5.9
gi|46316164|ref|ZP_00216744.1| COG0836: Mannose-1-phosphate guan... 33 5.9
gi|15242684|ref|NP_198857.1| pentatricopeptide (PPR) repeat-cont... 33 5.9
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabi... 33 5.9
gi|41723235|ref|ZP_00150178.1| COG0517: FOG: CBS domain [Dechlor... 33 5.9
gi|16082607|ref|NP_394748.1| RNase PH-related exoribonuclease [T... 33 5.9
gi|23490069|gb|EAA21930.1| hypothetical protein [Plasmodium yoel... 33 5.9
gi|15218985|ref|NP_176216.1| 3' exoribonuclease family domain 1-... 33 5.9
gi|10640638|emb|CAC12416.1| rRNA processing protein (yeast RRP45... 33 5.9
gi|37528046|ref|NP_931391.1| hypothetical protein [Photorhabdus ... 33 5.9
gi|31239481|ref|XP_320154.1| ENSANGP00000011759 [Anopheles gambi... 33 7.7
gi|46229194|gb|EAK90043.1| hypothetical low complexity protein w... 33 7.7
gi|47227286|emb|CAF96835.1| unnamed protein product [Tetraodon n... 33 7.7
gi|41724610|ref|ZP_00151447.1| COG1185: Polyribonucleotide nucle... 33 7.7
gi|22766813|gb|AAH37407.1| VIK protein [Homo sapiens] 33 7.7
gi|28416427|ref|NP_612503.1| vav-1 interacting Kruppel-like prot... 33 7.7
gi|47226604|emb|CAG08620.1| unnamed protein product [Tetraodon n... 33 7.7
gi|19353251|gb|AAH24770.1| similar to Unknown (protein for IMAGE... 33 7.7
gi|27690954|ref|XP_215566.1| similar to Exosome complex exonucle... 33 7.7
gi|32399026|emb|CAD98266.1| hypothetical predicted multi-pass tr... 33 7.7
>gi|17538326|ref|NP_502520.1| ribonuclease PH-like (26.1 kD) (4N865)
[Caenorhabditis elegans]
gi|6226696|sp|Q17533|RR41_CAEEL Putative exosome complex
exonuclease RRP41 (Ribosomal RNA processing protein 41)
gi|25289287|pir||B88880 protein B0564.1 [imported] - Caenorhabditis
elegans
gi|3873830|emb|CAA97771.3| Hypothetical protein B0564.1
[Caenorhabditis elegans]
Length = 240
Score = 479 bits (1232), Expect = e-134
Identities = 240/240 (100%), Positives = 240/240 (100%)
Frame = +1
Query: 1 MNIISEHGFRIDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVYGPYEGKSSKR 180
MNIISEHGFRIDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVYGPYEGKSSKR
Sbjct: 1 MNIISEHGFRIDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVYGPYEGKSSKR 60
Query: 181 IEDKCAIVCQYSATKFSGLERKNRTRGDRKSTEISRLLEKAFESVILTEAFPRSQLDIFC 360
IEDKCAIVCQYSATKFSGLERKNRTRGDRKSTEISRLLEKAFESVILTEAFPRSQLDIFC
Sbjct: 61 IEDKCAIVCQYSATKFSGLERKNRTRGDRKSTEISRLLEKAFESVILTEAFPRSQLDIFC 120
Query: 361 EVIQGDGSNLAACVNATSLALADAGIPMKGIASAATCGVVDGKPIVDLTSREETDLLPRV 540
EVIQGDGSNLAACVNATSLALADAGIPMKGIASAATCGVVDGKPIVDLTSREETDLLPRV
Sbjct: 121 EVIQGDGSNLAACVNATSLALADAGIPMKGIASAATCGVVDGKPIVDLTSREETDLLPRV 180
Query: 541 TLATICGRDEVILVELQNRLHIDHLSTVMDAAKATCADVYECLAVVAQQHLKACAPILGN 720
TLATICGRDEVILVELQNRLHIDHLSTVMDAAKATCADVYECLAVVAQQHLKACAPILGN
Sbjct: 181 TLATICGRDEVILVELQNRLHIDHLSTVMDAAKATCADVYECLAVVAQQHLKACAPILGN 240