Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= C05D9_6
         (891 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17550152|ref|NP_508215.1| membrane glycoprotein like (XB745) ...   553   e-156
gi|39595478|emb|CAE60516.1| Hypothetical protein CBG04135 [Caeno...   351   1e-95
gi|104757|pir||A38331 LEP100 protein precursor - chicken >gnl|BL...    56   1e-06
gi|45384206|ref|NP_990614.1| LEP100 protein [Gallus gallus] >gnl...    55   3e-06
gi|555692|gb|AAA99541.1| lysosome-associated membrane glycoprote...    52   2e-05
gi|1170800|sp|Q05204|LMP1_BOVIN Chromaffin granule-associated me...    49   2e-04
gi|56578|emb|CAA32873.1| 107 kDa sialoglycoprotein [Rattus norve...    46   0.001
gi|48976097|ref|NP_001001749.1| lysosome-associated membrane gly...    46   0.001
gi|91900|pir||A30200 120K lysosomal membrane glycoprotein precur...    46   0.001
gi|6981144|ref|NP_036989.1| lysosomal membrane glycoprotein 1; L...    46   0.001
gi|13905006|gb|AAH06785.1| Lamp1 protein [Mus musculus]                46   0.001
gi|18091799|gb|AAL58070.1| LAMP-1 [Mus musculus]                       46   0.001
gi|126377|sp|P11438|LMP1_MOUSE Lysosome-associated membrane glyc...    46   0.001
gi|91055|pir||A28067 lysosomal membrane glycoprotein LAMP-1 - mo...    46   0.001
gi|7106339|ref|NP_034814.1| lysosomal membrane glycoprotein 1; L...    46   0.001
gi|12835945|dbj|BAB23428.1| unnamed protein product [Mus musculus]     46   0.001
gi|41054397|ref|NP_955996.1| Unknown (protein for MGC:64072); wu...    44   0.004
gi|551493|gb|AAA99539.1| lysosome-associated membrane glycoprote...    44   0.005
gi|1346461|sp|P49129|LMP1_CRIGR LYSOSOME-ASSOCIATED MEMBRANE GLY...    44   0.005
gi|7669464|gb|AAF66141.1| lysosomal-associated membrane glycopro...    40   0.091
gi|7669503|ref|NP_054701.1| lysosomal-associated membrane protei...    40   0.091
gi|18204186|gb|AAH21288.1| LAMP1 protein [Homo sapiens]                40   0.091
gi|435756|gb|AAB28483.1| lysosomal membrane glycoprotein lamp-2 ...    40   0.091
gi|39645231|gb|AAH07845.2| LAMP1 protein [Homo sapiens]                40   0.091
gi|39644554|gb|AAH06345.2| LAMP1 protein [Homo sapiens]                40   0.091
gi|7669501|ref|NP_005552.2| lysosomal-associated membrane protei...    39   0.20
gi|1094569|prf||2106261A lysosome-associated membrane protein 2        39   0.20
gi|4504957|ref|NP_002285.1| lysosomal-associated membrane protei...    39   0.20
gi|1809215|gb|AAB41647.1| lysosomal membrane glycoprotein-2 [Hom...    39   0.20
gi|307132|gb|AAA59524.1| membrane glycoprotein                         39   0.20
gi|50416223|gb|AAH77933.1| Unknown (protein for MGC:80890) [Xeno...    37   0.45
gi|45550060|gb|AAS67876.1| lysosomal-associated membrane protein...    36   1.3
gi|21432043|gb|AAH32940.1| LAMP3 protein [Homo sapiens]                35   1.7
gi|3885360|dbj|BAA34533.1| TSC403 protein [Homo sapiens]               35   1.7
gi|1346462|sp|P49130|LMP2_CRIGR LYSOSOME-ASSOCIATED MEMBRANE GLY...    35   1.7
gi|39586676|emb|CAE69396.1| Hypothetical protein CBG15523 [Caeno...    35   1.7
gi|6066482|emb|CAB58440.1| lysosomal membrane glycoprotein [Lumb...    35   1.7
gi|38455385|ref|NP_055213.2| lysosomal-associated membrane prote...    35   2.2
gi|22086672|gb|AAM90730.1| DC-lysosome-associated membrane glyco...    35   2.2
gi|12848716|dbj|BAB28062.1| unnamed protein product [Mus musculus]     35   2.2
gi|26339188|dbj|BAC33265.1| unnamed protein product [Mus musculus]     35   2.2
gi|31543108|ref|NP_034815.2| lysosomal membrane glycoprotein 2; ...    35   2.2
gi|14318541|ref|NP_116674.1| 1-phosphatidylinositol-3-phosphate ...    35   2.9
gi|462047|sp|P34756|FAB1_YEAST 1-phosphatidylinositol-3-phosphat...    35   2.9
gi|47226213|emb|CAG08360.1| unnamed protein product [Tetraodon n...    35   2.9
gi|46436260|gb|EAK95625.1| hypothetical protein CaO19.6966 [Cand...    34   3.8
gi|13472118|ref|NP_103685.1| hypothetical protein mll2313 [Mesor...    34   3.8
gi|15966820|ref|NP_387173.1| HYPOTHETICAL PROTEIN SMc02468 [Sino...    34   3.8
gi|307110|gb|AAA60383.1| lysosomal membrane glycoprotein-2             34   5.0
gi|50752393|ref|XP_422770.1| PREDICTED: similar to lysosomal-ass...    34   5.0
gi|15891690|ref|NP_357362.1| AGR_L_3146p [Agrobacterium tumefaci...    34   5.0
gi|26251191|ref|NP_757231.1| Hypothetical protein [Escherichia c...    33   6.5
gi|50778497|ref|XP_427391.1| PREDICTED: similar to Hypothetical ...    33   8.5
gi|21357637|ref|NP_649639.1| CG1169-PA [Drosophila melanogaster]...    33   8.5
gi|46361278|gb|AAQ83266.2| CD68 protein [Equus caballus]               33   8.5
gi|40804990|gb|AAR91752.1| CD68 [Equus caballus]                       33   8.5


>gi|17550152|ref|NP_508215.1| membrane glycoprotein like (XB745)
           [Caenorhabditis elegans]
 gi|7495439|pir||T31062 hypothetical protein C05D9.2 -
           Caenorhabditis elegans
 gi|9798126|gb|AAF98603.1| Hypothetical protein C05D9.2
           [Caenorhabditis elegans]
          Length = 296

 Score =  553 bits (1424), Expect = e-156
 Identities = 273/296 (92%), Positives = 273/296 (92%)
 Frame = +1

Query: 1   MKQKCTCSLFIMVLTFXXXXXXXXXXXNKGVYKVVNSTTKEPCIIFQADIYLYLTYHTSD 180
           MKQKCTCSLFIMVLTF           NKGVYKVVNSTTKEPCIIFQADIYLYLTYHTSD
Sbjct: 1   MKQKCTCSLFIMVLTFISIADAASDAANKGVYKVVNSTTKEPCIIFQADIYLYLTYHTSD 60

Query: 181 SEKDVIVHVPTSSTADTGVSSCNVTITTSGMSVESQLLRVNLDHMNGWTIDFAFTKDNRF 360
           SEKDVIVHVPTSSTADTGVSSCNVTITTSGMSVESQLLRVNLDHMNGWTIDFAFTKDNRF
Sbjct: 61  SEKDVIVHVPTSSTADTGVSSCNVTITTSGMSVESQLLRVNLDHMNGWTIDFAFTKDNRF 120

Query: 361 KTEKEKQFALYQVNITANFASDPTAFPDFKYPTQQYYLHVDPNDLSDIGGSIFASVGHSY 540
           KTEKEKQFALYQVNITANFASDPTAFPDFKYPTQQYYLHVDPNDLSDIGGSIFASVGHSY
Sbjct: 121 KTEKEKQFALYQVNITANFASDPTAFPDFKYPTQQYYLHVDPNDLSDIGGSIFASVGHSY 180

Query: 541 YCPSEQKYAINDNDNDKYGPMAYIKFKLTTIQAFMEDTDSFGPKETCPTDQSTLDLVPII 720
           YCPSEQKYAINDNDNDKYGPMAYIKFKLTTIQAFMEDTDSFGPKETCPTDQSTLDLVPII
Sbjct: 181 YCPSEQKYAINDNDNDKYGPMAYIKFKLTTIQAFMEDTDSFGPKETCPTDQSTLDLVPII 240

Query: 721 VGSALAGXXXXXXXXXXXXRSFLPEEVLNLVNPEAHFDSDTASNDEIDKTSSIERF 888
           VGSALAG            RSFLPEEVLNLVNPEAHFDSDTASNDEIDKTSSIERF
Sbjct: 241 VGSALAGLIVLTLVVYLIYRSFLPEEVLNLVNPEAHFDSDTASNDEIDKTSSIERF 296




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