Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C07H6_4
(4137 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17552110|ref|NP_498649.1| CLIP-associating protein 2 family m... 2408 0.0
gi|39582028|emb|CAE64459.1| Hypothetical protein CBG09173 [Caeno... 1865 0.0
gi|17554664|ref|NP_499005.1| CLIP-associating protein 2 family m... 704 0.0
gi|345364|pir||S30876 hypothetical protein R107.6 - Caenorhabdit... 693 0.0
gi|39590667|emb|CAE65037.1| Hypothetical protein CBG09877 [Caeno... 499 e-139
gi|17556793|ref|NP_499034.1| CLIP-associating protein 2 family m... 354 1e-95
gi|280555|pir||S28293 hypothetical protein ZC84.3 - Caenorhabdit... 352 4e-95
gi|39585127|emb|CAE62778.1| Hypothetical protein CBG06947 [Caeno... 350 2e-94
gi|280556|pir||S28294 hypothetical protein ZC84.3a - Caenorhabdi... 341 8e-92
gi|47216132|emb|CAG10006.1| unnamed protein product [Tetraodon n... 159 7e-37
gi|38073278|ref|XP_355227.1| CLASP1 [Mus musculus] 147 2e-33
gi|31198601|ref|XP_308248.1| ENSANGP00000009334 [Anopheles gambi... 142 5e-32
gi|16758540|ref|NP_446174.1| CLIP-associating protein 2 [Rattus ... 130 3e-28
gi|26335757|dbj|BAC31579.1| unnamed protein product [Mus musculus] 128 1e-27
gi|20810065|gb|AAH29035.1| CLASP2 protein [Homo sapiens] 128 1e-27
gi|21749825|dbj|BAC03667.1| unnamed protein product [Homo sapiens] 128 1e-27
gi|42656712|ref|XP_291057.4| CLIP-associating protein 2 [Homo sa... 128 1e-27
gi|7513045|pir||T00386 hypothetical protein KIAA0627 - human (fr... 128 1e-27
gi|34364809|emb|CAE45842.1| hypothetical protein [Homo sapiens] 124 2e-26
gi|38090140|ref|XP_135174.3| CLIP-associating protein CLASP2 [Mu... 123 4e-26
gi|7513102|pir||T00387 KIAA0622 protein - human (fragment) >gnl|... 119 5e-25
gi|31563537|ref|NP_056097.1| CLIP-associating protein 1; multipl... 119 5e-25
gi|15079369|gb|AAH11530.1| Unknown (protein for IMAGE:3874558) [... 118 1e-24
gi|46309515|ref|NP_996955.1| hypothetical protein zgc:77279 [Dan... 116 5e-24
gi|50732912|ref|XP_418824.1| PREDICTED: similar to KIAA0627 prot... 108 8e-22
gi|33438165|dbj|BAC41436.2| mKIAA0627 protein [Mus musculus] 107 2e-21
gi|47219190|emb|CAG11208.1| unnamed protein product [Tetraodon n... 105 9e-21
gi|48098291|ref|XP_394024.1| similar to CLIP-associating protein... 103 3e-20
gi|47214380|emb|CAG00861.1| unnamed protein product [Tetraodon n... 103 5e-20
gi|50750878|ref|XP_426599.1| PREDICTED: similar to CLIP-associat... 98 1e-18
gi|26327099|dbj|BAC27293.1| unnamed protein product [Mus musculus] 96 6e-18
gi|24667856|ref|NP_524651.2| CG32435-PA [Drosophila melanogaster... 96 7e-18
gi|7527326|dbj|BAA94248.1| microtubule associated-protein orbit ... 96 7e-18
gi|50370265|gb|AAH75708.1| Unknown (protein for IMAGE:4910518) [... 93 6e-17
gi|13508653|emb|CAC35163.1| CLIP-associating protein CLASP1 [Mus... 92 8e-17
gi|26354994|dbj|BAB24639.2| unnamed protein product [Mus musculus] 92 8e-17
gi|6808437|emb|CAB70852.1| hypothetical protein [Homo sapiens] 92 8e-17
gi|34980884|gb|AAH57312.1| Unknown (protein for IMAGE:6824890) [... 92 8e-17
gi|34879404|ref|XP_222568.2| similar to CLIP-associating protein... 92 8e-17
gi|28972317|dbj|BAC65612.1| mKIAA0622 protein [Mus musculus] 92 8e-17
gi|50603946|gb|AAH77460.1| Unknown (protein for IMAGE:4679959) [... 91 2e-16
gi|50370047|gb|AAH76002.1| Unknown (protein for IMAGE:7054863) [... 90 4e-16
gi|13508539|emb|CAC35161.1| CLASP2 [Mus musculus] 90 5e-16
gi|50732914|ref|XP_418825.1| PREDICTED: similar to CLIP-associat... 87 4e-15
gi|47216131|emb|CAG10005.1| unnamed protein product [Tetraodon n... 82 8e-14
gi|38346560|emb|CAE04721.2| OSJNBa0043L24.9 [Oryza sativa (japon... 80 4e-13
gi|26348761|dbj|BAC38020.1| unnamed protein product [Mus musculus] 80 5e-13
gi|13508541|emb|CAC35162.1| CLASP1 [Mus musculus] 80 5e-13
gi|13508645|emb|CAC35156.1| CLIP-associating protein CLASP1 [Hom... 79 1e-12
gi|26330031|dbj|BAC28754.1| unnamed protein product [Mus musculus] 78 2e-12
gi|25411970|pir||B84586 hypothetical protein At2g20190 [imported... 77 3e-12
gi|42570286|ref|NP_849997.2| CLIP-associating protein (CLASP) -r... 77 3e-12
gi|47214381|emb|CAG00862.1| unnamed protein product [Tetraodon n... 76 6e-12
gi|38567848|emb|CAE05691.2| OSJNBb0002J11.18 [Oryza sativa (japo... 75 2e-11
gi|21619136|gb|AAH32563.1| CLASP1 protein [Homo sapiens] 68 2e-09
gi|10437147|dbj|BAB14995.1| unnamed protein product [Homo sapiens] 68 2e-09
gi|20072391|gb|AAH26688.1| Clasp2 protein [Mus musculus] 67 3e-09
gi|47200862|emb|CAF88184.1| unnamed protein product [Tetraodon n... 66 8e-09
gi|49619073|gb|AAT68121.1| clasp1 [Danio rerio] 64 4e-08
gi|47847664|dbj|BAD21445.1| CLIP-associating protein 1-like [Ory... 54 2e-05
gi|5921276|emb|CAB56504.1| microtubule-associated protein CP224 ... 54 3e-05
gi|31198603|ref|XP_308249.1| ENSANGP00000011035 [Anopheles gambi... 51 2e-04
gi|47848182|dbj|BAD22009.1| CLIP-associating protein-like [Oryza... 49 8e-04
gi|29251092|gb|EAA42576.1| GLP_487_14754_11830 [Giardia lamblia ... 49 0.001
gi|25411971|pir||C84586 hypothetical protein At2g20200 [imported... 47 0.005
gi|19114996|ref|NP_594084.1| putative mitotic spindle protein [S... 45 0.019
gi|12836868|dbj|BAB23842.1| unnamed protein product [Mus musculu... 44 0.025
gi|47230298|emb|CAG10712.1| unnamed protein product [Tetraodon n... 41 0.21
gi|32415842|ref|XP_328399.1| hypothetical protein [Neurospora cr... 41 0.21
gi|15219850|ref|NP_176298.1| expressed protein [Arabidopsis thal... 41 0.28
gi|46136513|ref|XP_389948.1| hypothetical protein FG09772.1 [Gib... 40 0.47
gi|50510481|dbj|BAD32226.1| mKIAA0423 protein [Mus musculus] 39 1.0
gi|49073198|ref|XP_400831.1| hypothetical protein UM03216.1 [Ust... 39 1.4
gi|40807213|gb|AAH65234.1| KIAA0423 protein [Homo sapiens] 39 1.4
gi|23100321|ref|NP_693788.1| 4-hydroxyphenylacetate degradation ... 38 1.8
gi|46120424|ref|XP_385035.1| hypothetical protein FG04859.1 [Gib... 38 2.3
gi|46123627|ref|XP_386367.1| hypothetical protein FG06191.1 [Gib... 37 3.1
gi|15639867|ref|NP_219317.1| conserved hypothetical protein [Tre... 37 3.1
gi|50423861|ref|XP_460515.1| unnamed protein product [Debaryomyc... 37 4.0
gi|21593517|gb|AAM65484.1| unknown [Arabidopsis thaliana] 37 4.0
gi|23619446|ref|NP_705408.1| hypothetical protein [Plasmodium fa... 37 4.0
gi|18414533|ref|NP_567477.1| expressed protein [Arabidopsis thal... 37 4.0
gi|34865276|ref|XP_234236.2| similar to KIAA0423 [Rattus norvegi... 37 4.0
gi|23485855|gb|EAA20604.1| Drosophila melanogaster LD33759p [Pla... 37 5.2
gi|47214613|emb|CAG01693.1| unnamed protein product [Tetraodon n... 37 5.2
gi|47219191|emb|CAG11209.1| unnamed protein product [Tetraodon n... 36 6.8
gi|23487793|gb|EAA21147.1| protein mix-1, putative [Plasmodium y... 36 6.8
gi|50305933|ref|XP_452927.1| unnamed protein product [Kluyveromy... 36 6.8
gi|34499719|ref|NP_903934.1| methionyl-tRNA formyltransferase [C... 36 6.8
gi|17230000|ref|NP_486548.1| GTP-binding elongation factor [Nost... 36 8.9
gi|45507810|ref|ZP_00160152.1| COG0481: Membrane GTPase LepA [An... 36 8.9
gi|23485529|gb|EAA20460.1| hypothetical protein [Plasmodium yoel... 36 8.9
>gi|17552110|ref|NP_498649.1| CLIP-associating protein 2 family member
(3I603) [Caenorhabditis elegans]
gi|15487557|gb|AAK85441.2| Hypothetical protein C07H6.3
[Caenorhabditis elegans]
Length = 1378
Score = 2408 bits (6241), Expect = 0.0
Identities = 1237/1378 (89%), Positives = 1237/1378 (89%)
Frame = +1
Query: 1 MDTNWLYVLLQKSTADPLERLKLGNVILNEVSQRKVSPHPKLVNDFLDVMSGWLTGSNFK 180
MDTNWLYVLLQKSTADPLERLKLGNVILNEVSQRKVSPHPKLVNDFLDVMSGWLTGSNFK
Sbjct: 1 MDTNWLYVLLQKSTADPLERLKLGNVILNEVSQRKVSPHPKLVNDFLDVMSGWLTGSNFK 60
Query: 181 VSTIGLEILDAALRTSPDVLASYYFDRCSVLIERMGDAKVQVREMAINLCLQLAYLENSS 360
VSTIGLEILDAALRTSPDVLASYYFDRCSVLIERMGDAKVQVREMAINLCLQLAYLENSS
Sbjct: 61 VSTIGLEILDAALRTSPDVLASYYFDRCSVLIERMGDAKVQVREMAINLCLQLAYLENSS 120
Query: 361 PVMLLDRLCVPGTGFQHKQWLVKVGSLNILREFLSSSFALVIQQAITLIPQLCRLTNDPN 540
PVMLLDRLCVPGTGFQHKQWLVKVGSLNILREFLSSSFALVIQQAITLIPQLCRLTNDPN
Sbjct: 121 PVMLLDRLCVPGTGFQHKQWLVKVGSLNILREFLSSSFALVIQQAITLIPQLCRLTNDPN 180
Query: 541 SEVRDVSTQCLIDLMVYGGKPIVAKIAATRLINEQKMATLLQRYQTTVATRGDLPPKHTI 720
SEVRDVSTQCLIDLMVYGGKPIVAKIAATRLINEQKMATLLQRYQTTVATRGDLPPKHTI
Sbjct: 181 SEVRDVSTQCLIDLMVYGGKPIVAKIAATRLINEQKMATLLQRYQTTVATRGDLPPKHTI 240
Query: 721 TMETTPAQPXXXXXXXXXXXXPAKIIHPXXXXXXXXXXXXXXXPPRPTTTAAQXXXXXXX 900
TMETTPAQP PAKIIHP PPRPTTTAAQ
Sbjct: 241 TMETTPAQPSRNSLLRRSLRSPAKIIHPSASTTSFTSSARLSTPPRPTTTAAQSLSLAPQ 300
Query: 901 XXXXXXXXXXXGGQMXXXXXXXXXXXXAPAGISISRYRSSSCAPAAQCAITLDDFKKSFT 1080
GGQM APAGISISRYRSSSCAPAAQCAITLDDFKKSFT
Sbjct: 301 TPSPLSLPSPSGGQMSRSRDLTRSSLRAPAGISISRYRSSSCAPAAQCAITLDDFKKSFT 360
Query: 1081 AVPKTTIYSNHDIREKLELANLVLRNANEDWSKRANQLKLIRSIIINCDENIDRSLLISI 1260
AVPKTTIYSNHDIREKLELANLVLRNANEDWSKRANQLKLIRSIIINCDENIDRSLLISI
Sbjct: 361 AVPKTTIYSNHDIREKLELANLVLRNANEDWSKRANQLKLIRSIIINCDENIDRSLLISI 420
Query: 1261 INELADALEFSIRDLRSQIVREAAVTCSFLFETFGMEVKNVAECVLPAALAQVAVSTKVI 1440
INELADALEFSIRDLRSQIVREAAVTCSFLFETFGMEVKNVAECVLPAALAQVAVSTKVI
Sbjct: 421 INELADALEFSIRDLRSQIVREAAVTCSFLFETFGMEVKNVAECVLPAALAQVAVSTKVI 480
Query: 1441 ASSAATLTVFIVQKIQTRQIFTTLSELSSSKAKEQRRQLAVVLETLIASWDLKSKQPILK 1620
ASSAATLTVFIVQKIQTRQIFTTLSELSSSKAKEQRRQLAVVLETLIASWDLKSKQPILK
Sbjct: 481 ASSAATLTVFIVQKIQTRQIFTTLSELSSSKAKEQRRQLAVVLETLIASWDLKSKQPILK 540
Query: 1621 QIAQLVQNAICDADGETRVAGRKAFAKLEQLHGTTADLIFRELDPAKQKMLRDGVXXXXX 1800
QIAQLVQNAICDADGETRVAGRKAFAKLEQLHGTTADLIFRELDPAKQKMLRDGV
Sbjct: 541 QIAQLVQNAICDADGETRVAGRKAFAKLEQLHGTTADLIFRELDPAKQKMLRDGVSSSSS 600
Query: 1801 XXXXXXXXXXXXXXXXXXXISQKFLSQRSASAVDKSIQLSVKPQTTAIPSRPTAMPMNNR 1980
ISQKFLSQRSASAVDKSIQLSVKPQTTAIPSRPTAMPMNNR
Sbjct: 601 SLNSDRDNNNQKQQPNQQNISQKFLSQRSASAVDKSIQLSVKPQTTAIPSRPTAMPMNNR 660
Query: 1981 LPKXXXXXXXXXXXXXGYGQNQSTTPNRAKTPSDGFAGSSPHYXXXXXXXXXXXXXXXXX 2160
LPK GYGQNQSTTPNRAKTPSDGFAGSSPHY
Sbjct: 661 LPKSSTSTSFSAVRSSGYGQNQSTTPNRAKTPSDGFAGSSPHYTNGNNNNKSSSSSPSTS 720
Query: 2161 XHQTPIQRVASNLGSSSFVASLTQEQANCLQNAMNTAKDEMSKNNEDDEFLLDEIRKTPP 2340
HQTPIQRVASNLGSSSFVASLTQEQANCLQNAMNTAKDEMSKNNEDDEFLLDEIRKTPP
Sbjct: 721 THQTPIQRVASNLGSSSFVASLTQEQANCLQNAMNTAKDEMSKNNEDDEFLLDEIRKTPP 780
Query: 2341 KEVPRSYNNSPFKPSNLDSSVHRSYNNNSPFRPXXXXXXXXXXXXXXXIEHILKACTSSS 2520
KEVPRSYNNSPFKPSNLDSSVHRSYNNNSPFRP IEHILKACTSSS
Sbjct: 781 KEVPRSYNNSPFKPSNLDSSVHRSYNNNSPFRPSSGSVGSGSNGSVQSIEHILKACTSSS 840
Query: 2521 LNEKRDAIVNLNQVITDPNLCQLECKNIGDTLSRLLAEGNNXXXXXXXXXXXXXXKFQYK 2700
LNEKRDAIVNLNQVITDPNLCQLECKNIGDTLSRLLAEGNN KFQYK
Sbjct: 841 LNEKRDAIVNLNQVITDPNLCQLECKNIGDTLSRLLAEGNNTLIISILDTISIFIKFQYK 900
Query: 2701 KLDNWLKLALGKLFAKMGADALPNVKSALSSTQKMFLTTFDPTFQLKAVCDFMCDPVHLL 2880
KLDNWLKLALGKLFAKMGADALPNVKSALSSTQKMFLTTFDPTFQLKAVCDFMCDPVHLL
Sbjct: 901 KLDNWLKLALGKLFAKMGADALPNVKSALSSTQKMFLTTFDPTFQLKAVCDFMCDPVHLL 960
Query: 2881 SPKSRLALLEYICLLFEEIWPEDPRCLERQTHLDTPYTRAAIRKMFAWMFDPRIGAILMP 3060
SPKSRLALLEYICLLFEEIWPEDPRCLERQTHLDTPYTRAAIRKMFAWMFDPRIGAILMP
Sbjct: 961 SPKSRLALLEYICLLFEEIWPEDPRCLERQTHLDTPYTRAAIRKMFAWMFDPRIGAILMP 1020
Query: 3061 ACERLVCALFALNAADFTMIFGELPSECRDWAYRILQLNGQQNNQKPIEKEKERFISNNN 3240
ACERLVCALFALNAADFTMIFGELPSECRDWAYRILQLNGQQNNQKPIEKEKERFISNNN
Sbjct: 1021 ACERLVCALFALNAADFTMIFGELPSECRDWAYRILQLNGQQNNQKPIEKEKERFISNNN 1080
Query: 3241 YKPCPLDNEEIEKPIMKTTYSTYESTRKEYSQTERIATENQYSTPPPPDYRTSTAHLAKN 3420
YKPCPLDNEEIEKPIMKTTYSTYESTRKEYSQTERIATENQYSTPPPPDYRTSTAHLAKN
Sbjct: 1081 YKPCPLDNEEIEKPIMKTTYSTYESTRKEYSQTERIATENQYSTPPPPDYRTSTAHLAKN 1140
Query: 3421 HVDQAAYIRNQLDAIRDFEKADKLNEAMANLHGMMCEGSFTLWNQFFDELLDSIYQILST 3600
HVDQAAYIRNQLDAIRDFEKADKLNEAMANLHGMMCEGSFTLWNQFFDELLDSIYQILST
Sbjct: 1141 HVDQAAYIRNQLDAIRDFEKADKLNEAMANLHGMMCEGSFTLWNQFFDELLDSIYQILST 1200
Query: 3601 FSQSIRKKLALRILQKMCTAQATKLFDSTEIAISKVLQCACTSDDNTMGVAAEDCLRILA 3780
FSQSIRKKLALRILQKMCTAQATKLFDSTEIAISKVLQCACTSDDNTMGVAAEDCLRILA
Sbjct: 1201 FSQSIRKKLALRILQKMCTAQATKLFDSTEIAISKVLQCACTSDDNTMGVAAEDCLRILA 1260
Query: 3781 SHLPLTRVVLISRRILSQDDDDQRGVLILKMLTRMFQDIDIEELHLIVNDVAPCFVTAYE 3960
SHLPLTRVVLISRRILSQDDDDQRGVLILKMLTRMFQDIDIEELHLIVNDVAPCFVTAYE
Sbjct: 1261 SHLPLTRVVLISRRILSQDDDDQRGVLILKMLTRMFQDIDIEELHLIVNDVAPCFVTAYE 1320
Query: 3961 SMSSTVRKCAVFGLVALVQRVGMQRMEPHLRTLNASKLNLIDLYVGRAKSSESGASSN 4134
SMSSTVRKCAVFGLVALVQRVGMQRMEPHLRTLNASKLNLIDLYVGRAKSSESGASSN
Sbjct: 1321 SMSSTVRKCAVFGLVALVQRVGMQRMEPHLRTLNASKLNLIDLYVGRAKSSESGASSN 1378
>gi|39582028|emb|CAE64459.1| Hypothetical protein CBG09173
[Caenorhabditis briggsae]
Length = 1346
Score = 1865 bits (4831), Expect = 0.0
Identities = 995/1395 (71%), Positives = 1091/1395 (77%), Gaps = 17/1395 (1%)
Frame = +1
Query: 1 MDTNWLYVLLQKSTADPLERLKLGNVILNEVSQRKVSPHPKLVNDFLDVMSGWLTGSNFK 180
MDTNWLYVLLQKSTADPLERLKLGNVILNE+SQRKVSPHPKLVNDFLDVMSGWLTGSNFK
Sbjct: 1 MDTNWLYVLLQKSTADPLERLKLGNVILNEISQRKVSPHPKLVNDFLDVMSGWLTGSNFK 60
Query: 181 VSTIGLEILDAALRTSPDVLASYYFDRCSVLIERMGDAKVQVREMAINLCLQLAYLENSS 360
V+ IGLEILDAALRTSP+VLASYYFDR SVLIERMGDAKVQVREMAINLC QLAYLENSS
Sbjct: 61 VTIIGLEILDAALRTSPEVLASYYFDRLSVLIERMGDAKVQVREMAINLCRQLAYLENSS 120
Query: 361 PVMLLDRLCVPGTGFQHKQWLVKVGSLNILREFLSSSFALVIQQAITLIPQLCRLTNDPN 540
PVMLLDRLCV GTGF+HKQWLVKVGSLNILR+FLS SFALVI QAI LIPQLCRLTNDPN
Sbjct: 121 PVMLLDRLCVHGTGFEHKQWLVKVGSLNILRDFLSDSFALVIPQAINLIPQLCRLTNDPN 180
Query: 541 SEVRDVSTQCLIDLMVYGGKPIVAKIAATRLINEQKMATLLQRYQTTVATRGDLPPKHTI 720
SEVRD ST CL+DLMV+GGK I+AKIA TR++NEQKMATLLQRY++T+ATRGDLPPKH+I
Sbjct: 181 SEVRDASTNCLVDLMVFGGKSIIAKIANTRILNEQKMATLLQRYESTIATRGDLPPKHSI 240
Query: 721 TMETTPAQPXXXXXXXXXXXXPAKIIHPXXXXXXXXXXXXXXXPPRPTTTAAQXXXXXXX 900
+ET+ PAKIIHP PPR T A
Sbjct: 241 PIETSSIP--RNNLLRRSLRSPAKIIHPSASTTSFTSSARLSTPPR---TNAPSLSPSPS 295
Query: 901 XXXXXXXXXXXGGQMXXXXXXXXXXXXAPAGISISRYRSSSCAPAAQCAITLDDFKKSFT 1080
G APAG+S+SRYRSSSCAPAAQCAITLDDFKK+F
Sbjct: 296 TPSPLSLPAANG----RSRDLARSSLRAPAGMSLSRYRSSSCAPAAQCAITLDDFKKAFN 351
Query: 1081 AVPKTTIYSNHDIREKLELANLVLRNANEDWSKRANQLKLIRSIIINCDENIDRSLLISI 1260
AVPK +IYSN D+REKLE AN VLRNANEDWSKRANQLKLIRS+I+N D++ID+ LL+S+
Sbjct: 352 AVPKISIYSNSDVREKLETANSVLRNANEDWSKRANQLKLIRSVILNSDDSIDQRLLLSL 411
Query: 1261 INELADALEFSIRDLRSQIVREAAVTCSFLFETFGMEVKNVAECVLPAALAQVAVSTKVI 1440
INELADALEFSIRDLRSQIVREAA+TCSFLFE FGM+V+NVAECVLPAALAQVAVSTK++
Sbjct: 412 INELADALEFSIRDLRSQIVREAAITCSFLFEHFGMDVRNVAECVLPAALAQVAVSTKIM 471
Query: 1441 ASSAATLTVFIVQKIQTRQIFTTLSELSSSKAKEQRRQLAVVLETLIASWDLKSKQPILK 1620
ASSAATLTVFIVQKIQTRQIF TL +LS+SK+KEQRRQLA +LETLI+SWDLK KQPILK
Sbjct: 472 ASSAATLTVFIVQKIQTRQIFQTLFDLSTSKSKEQRRQLANLLETLISSWDLKVKQPILK 531
Query: 1621 QIAQLVQNAICDADGETRVAGRKAFAKLEQLHGTTADLIFRELDPAKQKMLRDGVXXXXX 1800
I+QLVQNAICDADGETRVAGRKAFAKLEQLHG AD IFRELDPAKQKMLRDGV
Sbjct: 532 SISQLVQNAICDADGETRVAGRKAFAKLEQLHGAAADQIFRELDPAKQKMLRDGVSSSSS 591
Query: 1801 XXXXXXXXXXXXX-XXXXXXISQKFLSQRSASAVD-KSIQLSVKPQTTAIPSRPTAMPMN 1974
ISQKFLSQRSASA+D KS LS+ + PSRPTAMP+N
Sbjct: 592 SLNSDRDNNNQKQPQQPQQNISQKFLSQRSASALDNKSQVLSIAKPQQSNPSRPTAMPVN 651
Query: 1975 NRLPKXXXXXXXXXXXXXGYGQNQSTTPNRAKTPSDGFAGSSPHYXXXXXXXXXXXXXXX 2154
NRLPK GYGQ +RAKTPSDGF G++
Sbjct: 652 NRLPKSSTSSSFSAVRSSGYGQ------SRAKTPSDGFGGTN-FNNNNNNNNKSSSSSPS 704
Query: 2155 XXXHQTPIQRVASNLGSSSFVASLTQEQANCLQNAMNTAKDEMSKNNEDDEFLLDEIRKT 2334
HQTPIQRVASNLGSSSFVASLTQEQA+ LQNAM+ AKDEMSKNNEDDEFLL E+RKT
Sbjct: 705 TSTHQTPIQRVASNLGSSSFVASLTQEQASSLQNAMDLAKDEMSKNNEDDEFLLAEVRKT 764
Query: 2335 PPKEVPRSYNNSPFKPSNLDSSVHRSYNNNSPFRPXXXXXXXXXXXXXXXIEHILKACTS 2514
PPKE SP P++L + R Y N S +EHILKACTS
Sbjct: 765 PPKE------TSP--PASLYA---RGYGNGS------NGSNNSSNNSIQSVEHILKACTS 807
Query: 2515 SSLNEKRDAIVNLNQVITDPNLCQLECKNIGDTLSRLLAEGNNXXXXXXXXXXXXXXKFQ 2694
SS+NEKRDAI++L+Q + D NL LECKNIGDTLSRLLAEGN K
Sbjct: 808 SSINEKRDAIISLSQKLLDRNLDSLECKNIGDTLSRLLAEGNTTLIISILETISIFVKCH 867
Query: 2695 YKKLDNWLKLALGKLFAKMGADALPNVKSALSSTQKMFLTTFDPTFQLKAVCDFMCDPVH 2874
YKKLD WLKLALGKLFAKMGAD+LPNVKSALSSTQKMFLTTFDP+ QLK VCDFMCDPVH
Sbjct: 868 YKKLDGWLKLALGKLFAKMGADSLPNVKSALSSTQKMFLTTFDPSTQLKEVCDFMCDPVH 927
Query: 2875 LLSPKSRLALLEYICLLFEEIWPEDPRCLERQTHLDTPYTRAAIRKMFAWMFDPRIGAIL 3054
LL+PKSRLALLEYICLLFEEIWPEDPRCLERQT LDTPYTRAA+RKMFAWMFDPRIGAIL
Sbjct: 928 LLAPKSRLALLEYICLLFEEIWPEDPRCLERQTQLDTPYTRAAVRKMFAWMFDPRIGAIL 987
Query: 3055 MPACERLVCALFALNAADFTMIFGELPSECRDWAYRILQLNGQQNN---QKPIEKE---- 3213
MPACERLVCALFALNAADFTMIFG+LP ECRDWAYRILQLNGQQ + Q+ +EKE
Sbjct: 988 MPACERLVCALFALNAADFTMIFGDLPPECRDWAYRILQLNGQQQSAQRQQIMEKEYVNL 1047
Query: 3214 -KERFI-------SNNNYKPCPLDNEEIEKPIMKTTYSTYESTRKEYSQTERIATENQYS 3369
++F+ + + E+ K + + ++STYE+TR
Sbjct: 1048 FLKKFLKIQIFQHDQQQLQAMSAGSREVRKSLGEASFSTYEATR---------------- 1091
Query: 3370 TPPPPDYRTSTAHLAKNHVDQAAYIRNQLDAIRDFEKADKLNEAMANLHGMMCEGSFTLW 3549
P P DYR T HLAKNHV+QAAYIRNQ+D +RDF+K D++NEAMANLHGMMCEGSFTLW
Sbjct: 1092 VPEPQDYRKPTVHLAKNHVEQAAYIRNQMDLMRDFQKPDRVNEAMANLHGMMCEGSFTLW 1151
Query: 3550 NQFFDELLDSIYQILSTFSQSIRKKLALRILQKMCTAQATKLFDSTEIAISKVLQCACTS 3729
NQFFDELLD IYQILST SQSIRKKLA+RILQKMCTAQATKLFDSTEIAISKVLQCACTS
Sbjct: 1152 NQFFDELLDEIYQILSTLSQSIRKKLAMRILQKMCTAQATKLFDSTEIAISKVLQCACTS 1211
Query: 3730 DDNTMGVAAEDCLRILASHLPLTRVVLISRRILSQDDDDQRGVLILKMLTRMFQDIDIEE 3909
+DNTM VAAEDCLRILA+HLPL R+V ISRRILSQDDDDQRGVLILKMLTRMFQDID++E
Sbjct: 1212 EDNTMSVAAEDCLRILATHLPLPRIVQISRRILSQDDDDQRGVLILKMLTRMFQDIDVDE 1271
Query: 3910 LHLIVNDVAPCFVTAYESMSSTVRKCAVFGLVALVQRVGMQRMEPHLRTLNASKLNLIDL 4089
LH+IV+DVAPCFV+AY+S SS+VRKCAVFGLVALVQRVGM R+E HLR LNA+KLNLIDL
Sbjct: 1272 LHMIVDDVAPCFVSAYDSTSSSVRKCAVFGLVALVQRVGMPRLETHLRKLNATKLNLIDL 1331
Query: 4090 YVGRAKSSESGASSN 4134
YVGRAKSSESG SSN
Sbjct: 1332 YVGRAKSSESGTSSN 1346
>gi|17554664|ref|NP_499005.1| CLIP-associating protein 2 family
member, CLASP family of microtubule-binding proteins
CLS-2 (cls-2) [Caenorhabditis elegans]
gi|732211|sp|P32744|YNH6_CAEEL Hypothetical protein R107.6 in
chromosome III
gi|25395900|pir||E88546 protein R107.6 [imported] - Caenorhabditis
elegans
gi|3879037|emb|CAA78472.1| Hypothetical protein R107.6
[Caenorhabditis elegans]
Length = 1063
Score = 704 bits (1816), Expect = 0.0
Identities = 426/1071 (39%), Positives = 604/1071 (55%), Gaps = 37/1071 (3%)
Frame = +1
Query: 1018 SSCAPAAQCAITLDDFKKSFTAVPKTTIYSNHDIREKLELANLVLRNANEDWSKRANQLK 1197
S P C ++ DDF KSF VPK I S D +EKL+ L EDW+KR N+LK
Sbjct: 49 SRSTPGGTCIVSKDDFLKSFEEVPKMEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLK 108
Query: 1198 LIRSIIINCDENIDRSLLISIINELADALEFSIRDLRSQIVREAAVTCSFLFETFGMEVK 1377
IRS++++ ++ I R L+S + L D L+ S++DLRSQI+REAA+TC FLF+ FG +V+
Sbjct: 109 QIRSMVVHGEDVIGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRFGTDVR 168
Query: 1378 NVAECVLPAALAQVAVSTKVIASSAATLTVFIVQKIQTRQIFTTLSELSSSKAKEQRRQL 1557
+AE LP+A AQVAVSTKV+A+ A LT+FIV+ IQT+QIFT ++ S+SK K QRRQL
Sbjct: 169 QIAERCLPSAFAQVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIASYSTSKDKNQRRQL 228
Query: 1558 AVVLETLIASWDLKSKQPILKQIAQLVQNAICDADGETRVAGRKAFAKLEQLHGTTADLI 1737
+LE ++ W+ K K+ +L QI +L++ AICDAD ETRVAGRKAF+KL+ LH T AD +
Sbjct: 229 CALLEIVLEHWNEKIKRTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHSTEADKL 288
Query: 1738 FRELDPAKQKMLRDGVXXXXXXXXXXXXXXXXXXXXXXXX----------ISQKFLSQRS 1887
F +D +KQKMLR IS KFL+QRS
Sbjct: 289 FASVDSSKQKMLRASDAASSSTSINSERGTAPFRSKLSAGSIGGIRNAPNISSKFLAQRS 348
Query: 1888 ASAVDKSIQLSVKPQTTAIPSRPTAMPMNNR-LPKXXXXXXXXXXXXXGYGQNQSTTPNR 2064
ASA+D V T++ P PM R L K G S T +
Sbjct: 349 ASAIDTK---QVTRMATSVSRTPNIRPMTTRTLSKIDTSPGGSKFARPTVGALGSRTSSN 405
Query: 2065 AKTPSDGFAGSSPHYXXXXXXXXXXXXXXXXXXHQTPIQRVASNLGSSSFVASLTQEQAN 2244
+ GS P +QRV SNLGS+SFV+SL+ E+A
Sbjct: 406 LRA-----RGSVPTSQPGSRNGSPPRRPSATEAFPAEMQRVKSNLGSNSFVSSLSAEEAT 460
Query: 2245 CLQNAMNTAKDEMSK--NNEDDEFLLDEIRKTPPKEVPRSYNNSPFKPSNLDSSVHRSYN 2418
LQ AMNTAK+ + + N+DDEFLL + R TP K P+ S LD+S
Sbjct: 461 KLQKAMNTAKESLRQPSRNDDDEFLLPK-RPTPQKATPQK--------SALDTS------ 505
Query: 2419 NNSPFRPXXXXXXXXXXXXXXXIEHILKACTSSSLNEKRDAIVNLNQVITDPNLCQLECK 2598
+E +++AC+S+S NEKR+ I L ++++PNL E K
Sbjct: 506 ---------------------RVEEVIRACSSTSANEKREGIKMLAGIVSEPNLSNAEIK 544
Query: 2599 NIGDTLSRLLAEGNNXXXXXXXXXXXXXXKFQYKKLDNWLKLALGKLFAKMGADALPNVK 2778
++G L+RLL E N K + +L +WLKL LGKLFAK GA+ N K
Sbjct: 545 SLGAVLNRLLGESTNQIVLESISSFV---KTHHPRLSDWLKLGLGKLFAKKGAEMTLNSK 601
Query: 2779 SALSSTQKMFLTTFDPTFQLKAVCDFMCDPVHLLSPKSRLALLEYICLLFEEIWPEDPRC 2958
+S+T L++FDPT QLK+ C+ +CDP+HL+SPKSR+ LLEY+ L +
Sbjct: 602 KQISTTISCILSSFDPTLQLKSTCELVCDPIHLMSPKSRVVLLEYLNELLGKY------- 654
Query: 2959 LERQTHLDTPYTRAAIRKMFAWMFDPRIGAILMPACERLVCALFALNAADFTMIFGELPS 3138
+ER + +T +A I KMF+WM D R ++ P E+++C+LFALN ADF+ +F +
Sbjct: 655 MERGSSFNTKEMKATILKMFSWMADQRNEQLITPHGEKVLCSLFALNNADFSALFNDFNP 714
Query: 3139 ECRDWAYRILQLNGQQNN---QKPIEKEK-------------ERFISNNNYKPCPLDNEE 3270
+ RDWAY++LQ +G + Q + +E E F+ + N LD
Sbjct: 715 DYRDWAYKVLQSHGHDQHVPQQDAVSEEACVRATISTTAAQIEDFVVSRN-----LDMTP 769
Query: 3271 IEKPIMKTTYSTY-----ESTRKEYSQTERIATENQYSTPPPPDYR--TSTAHLAKNHVD 3429
++ P + S + E R S+ + + S D ST HL + +
Sbjct: 770 VKSPSTRAISSGFKRVDAEPLRPLSSEMNSQHRDEELSFNESFDRLKLNSTTHLIDDTSE 829
Query: 3430 QAAYIRNQLDAIRDFEKADKLNEAMANLHGMMCEGSFTLWNQFFDELLDSIYQILSTFSQ 3609
Q+ Y+ ++L I A + E + ++ M+CEGSFTLW Q F +LL +++ +LS
Sbjct: 830 QSKYVASKLAQISGDMGAQQY-EGLLSIQTMLCEGSFTLWEQNFAKLLIAVFDVLSKSES 888
Query: 3610 SIRKKLALRILQKMCTAQATKLFDSTEIAISKVLQCACTSDDNTMGVAAEDCLRILASHL 3789
KK+ALR+L KMCT+QA++LFDSTE+AI KVL A S D TM V A+DCL+ LA+HL
Sbjct: 889 DANKKVALRVLTKMCTSQASRLFDSTEMAICKVLDAAVNSQDGTMNVTADDCLKTLATHL 948
Query: 3790 PLTRVVLISRRILSQDD-DDQRGVLILKMLTRMFQDIDIEELHLIVNDVAPCFVTAYESM 3966
PL +VV IS+ IL+++ + + L+LKM+TR+F+ + +EL +V+D+APC + +Y+S
Sbjct: 949 PLAKVVNISQLILNEEKAQEPKASLVLKMMTRLFEGLQADELSPVVDDLAPCVIKSYDSP 1008
Query: 3967 SSTVRKCAVFGLVALVQRVGMQRMEPHLRTLNASKLNLIDLYVGRAKSSES 4119
SS VRK AV+ LVA+V ++GM+ MEPHL+ L++ KLNL+ +YV RA SS S
Sbjct: 1009 SSAVRKTAVYCLVAMVNKLGMKTMEPHLQNLSSGKLNLVQVYVNRAMSSSS 1059
>gi|345364|pir||S30876 hypothetical protein R107.6 - Caenorhabditis
elegans
Length = 1080
Score = 693 bits (1788), Expect = 0.0
Identities = 426/1088 (39%), Positives = 604/1088 (55%), Gaps = 54/1088 (4%)
Frame = +1
Query: 1018 SSCAPAAQCAITLDDFKKSFTAVPKTTIYSNHDIREKLELANLVLRNANEDWSKRANQLK 1197
S P C ++ DDF KSF VPK I S D +EKL+ L EDW+KR N+LK
Sbjct: 49 SRSTPGGTCIVSKDDFLKSFEEVPKMEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLK 108
Query: 1198 LIRSIIINCDENIDRSLLISIINELADALEFSIRDLRSQIVREAAVTCSFLFETFGMEVK 1377
IRS++++ ++ I R L+S + L D L+ S++DLRSQI+REAA+TC FLF+ FG +V+
Sbjct: 109 QIRSMVVHGEDVIGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRFGTDVR 168
Query: 1378 NVAECVLPAALAQVAVSTKVIASSAATLTVFIVQKIQTRQIFTTLSELSSSKAKEQRRQL 1557
+AE LP+A AQVAVSTKV+A+ A LT+FIV+ IQT+QIFT ++ S+SK K QRRQL
Sbjct: 169 QIAERCLPSAFAQVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIASYSTSKDKNQRRQL 228
Query: 1558 AVVLETLIASWDLKSKQPILKQIAQLVQNAICDADGETRVAGRKAFAKLEQLHGTTADLI 1737
+LE ++ W+ K K+ +L QI +L++ AICDAD ETRVAGRKAF+KL+ LH T AD +
Sbjct: 229 CALLEIVLEHWNEKIKRTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHSTEADKL 288
Query: 1738 FRELDPAKQKMLRDGVXXXXXXXXXXXXXXXXXXXXXXXX----------ISQKFLSQRS 1887
F +D +KQKMLR IS KFL+QRS
Sbjct: 289 FASVDSSKQKMLRASDAASSSTSINSERGTAPFRSKLSAGSIGGIRNAPNISSKFLAQRS 348
Query: 1888 ASAVDKSIQLSVKPQTTAIPSRPTAMPMNNR-LPKXXXXXXXXXXXXXGYGQNQSTTPNR 2064
ASA+D V T++ P PM R L K G S T +
Sbjct: 349 ASAIDTK---QVTRMATSVSRTPNIRPMTTRTLSKIDTSPGGSKFARPTVGALGSRTSSN 405
Query: 2065 AKTPSDGFAGSSPHYXXXXXXXXXXXXXXXXXXHQTPIQRVASNLGSSSFVASLTQEQAN 2244
+ GS P +QRV SNLGS+SFV+SL+ E+A
Sbjct: 406 LRA-----RGSVPTSQPGSRNGSPPRRPSATEAFPAEMQRVKSNLGSNSFVSSLSAEEAT 460
Query: 2245 CLQNAMNTAKDEMSK--NNEDDEFLLDEIRKTPPKEVPRSYNNSPFKPSNLDSSVHRSYN 2418
LQ AMNTAK+ + + N+DDEFLL + R TP K P+ S LD+S
Sbjct: 461 KLQKAMNTAKESLRQPSRNDDDEFLLPK-RPTPQKATPQK--------SALDTS------ 505
Query: 2419 NNSPFRPXXXXXXXXXXXXXXXIEHILKACTSSSLNEKRDAIVNLNQVITDPNLCQLECK 2598
+E +++AC+S+S NEKR+ I L ++++PNL E K
Sbjct: 506 ---------------------RVEEVIRACSSTSANEKREGIKMLAGIVSEPNLSNAEIK 544
Query: 2599 NIGDTLSRLLAEGNNXXXXXXXXXXXXXXKFQYKKLDNWLKLALGKLFAKMGADALPNVK 2778
++G L+RLL E N K + +L +WLKL LGKLFAK GA+ N K
Sbjct: 545 SLGAVLNRLLGESTNQIVLESISSFV---KTHHPRLSDWLKLGLGKLFAKKGAEMTLNSK 601
Query: 2779 SALSSTQKMFLTTFDPTFQLKAVCDFMCDPVHLLSPKSRLALLEYICLLFEEIWPEDPRC 2958
+S+T L++FDPT QLK+ C+ +CDP+HL+SPKSR+ LLEY+ L +
Sbjct: 602 KQISTTISCILSSFDPTLQLKSTCELVCDPIHLMSPKSRVVLLEYLNELLGKY------- 654
Query: 2959 LERQTHLDTPYTRAAIRKMFAWMFDPRIGAILMPACERLVCALFALNAADFTMIFGELPS 3138
+ER + +T +A I KMF+WM D R ++ P E+++C+LFALN ADF+ +F +
Sbjct: 655 MERGSSFNTKEMKATILKMFSWMADQRNEQLITPHGEKVLCSLFALNNADFSALFNDFNP 714
Query: 3139 ECRDWAYRILQLNGQQNN---QKPIEKEK-------------ERFISNNNYKPCPLDNEE 3270
+ RDWAY++LQ +G + Q + +E E F+ + N LD
Sbjct: 715 DYRDWAYKVLQSHGHDQHVPQQDAVSEEACVRATISTTAAQIEDFVVSRN-----LDMTP 769
Query: 3271 IEKPIMKTTYSTY-----ESTRKEYSQTERIATENQYSTPPPPDYR--TSTAHLAKNHVD 3429
++ P + S + E R S+ + + S D ST HL + +
Sbjct: 770 VKSPSTRAISSGFKRVDAEPLRPLSSEMNSQHRDEELSFNESFDRLKLNSTTHLIDDTSE 829
Query: 3430 QAAYIRNQLDAIRDFEKADKLNEAMANLHGMMCEGSFTLWNQFFDELLDSIYQILSTFSQ 3609
Q+ Y+ ++L I A + E + ++ M+CEGSFTLW Q F +LL +++ +LS
Sbjct: 830 QSKYVASKLAQISGDMGAQQY-EGLLSIQTMLCEGSFTLWEQNFAKLLIAVFDVLSKSES 888
Query: 3610 SIRKKLALRILQKMCTAQATKLFDSTEIAISKVLQCACTSDDNTMGVAAEDCLRILASHL 3789
KK+ALR+L KMCT+QA++LFDSTE+AI KVL A S D TM V A+DCL+ LA+HL
Sbjct: 889 DANKKVALRVLTKMCTSQASRLFDSTEMAICKVLDAAVNSQDGTMNVTADDCLKTLATHL 948
Query: 3790 PLTRVVLISRRILSQDD-DDQRGVLILKMLTRMFQDIDIEELHLIVNDVAPCFV------ 3948
PL +VV IS+ IL+++ + + L+LKM+TR+F+ + +EL +V+D+APC +
Sbjct: 949 PLAKVVNISQLILNEEKAQEPKASLVLKMMTRLFEGLQADELSPVVDDLAPCVIKVTIYQ 1008
Query: 3949 -----------TAYESMSSTVRKCAVFGLVALVQRVGMQRMEPHLRTLNASKLNLIDLYV 4095
+Y+S SS VRK AV+ LVA+V ++GM+ MEPHL+ L++ KLNL+ +YV
Sbjct: 1009 TSQFINEIFTLQSYDSPSSAVRKTAVYCLVAMVNKLGMKTMEPHLQNLSSGKLNLVQVYV 1068
Query: 4096 GRAKSSES 4119
RA SS S
Sbjct: 1069 NRAMSSSS 1076