Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C11G6_2
(1932 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17550332|ref|NP_510657.1| TBP-Associated transcription Factor... 960 0.0
gi|39596341|emb|CAE69979.1| Hypothetical protein CBG16377 [Caeno... 390 e-107
gi|39592330|emb|CAE63407.1| Hypothetical protein CBG07847 [Caeno... 131 7e-29
gi|13374079|emb|CAC34475.1| TAFII140 protein [Homo sapiens] 74 2e-11
gi|38383015|gb|AAH62352.1| TAF3 protein [Homo sapiens] 74 2e-11
gi|28175603|gb|AAH45106.1| TAF3 protein [Homo sapiens] 74 2e-11
gi|42659458|ref|XP_291729.4| RNA polymerase II transcription fac... 74 2e-11
gi|49256603|gb|AAH73884.1| TAF3 protein [Homo sapiens] 74 2e-11
gi|20819438|ref|XP_129997.1| TAF3 RNA polymerase II, TATA box bi... 73 3e-11
gi|34876351|ref|XP_225559.2| similar to TAFII140 protein [Rattus... 73 3e-11
gi|50731533|ref|XP_417295.1| PREDICTED: similar to TAF3 protein ... 72 5e-11
gi|7512915|pir||T17342 hypothetical protein DKFZp586K1924.1 - hu... 69 5e-10
gi|50417993|gb|AAH77807.1| Unknown (protein for IMAGE:5155330) [... 67 1e-09
gi|49250489|gb|AAH74544.1| Unknown (protein for IMAGE:5335694) [... 65 4e-09
gi|47224439|emb|CAG08689.1| unnamed protein product [Tetraodon n... 64 1e-08
gi|45478238|gb|AAS66290.1| LRRGT00199 [Rattus norvegicus] 58 9e-07
gi|31240021|ref|XP_320424.1| ENSANGP00000016698 [Anopheles gambi... 56 3e-06
gi|27696376|gb|AAH43877.1| Tbn-prov protein [Xenopus laevis] 54 1e-05
gi|20070378|ref|NP_612639.1| taube nuss; TAF8 RNA polymerase II,... 53 2e-05
gi|17537523|ref|NP_497064.1| putative nuclear protein, with 2 co... 53 3e-05
gi|26352151|dbj|BAC39712.1| unnamed protein product [Mus musculus] 51 9e-05
gi|11528498|ref|NP_071298.1| taube nuss [Mus musculus] >gnl|BL_O... 51 9e-05
gi|37046785|gb|AAH57895.1| Tbn protein [Mus musculus] 51 9e-05
gi|31323620|gb|AAP47094.1| TBP-associated factor TAFII43 [Homo s... 51 9e-05
gi|21707439|gb|AAH33728.1| Unknown (protein for MGC:45470) [Homo... 51 9e-05
gi|34874377|ref|XP_236948.2| similar to taube nuss [Rattus norve... 51 9e-05
gi|50760503|ref|XP_418049.1| PREDICTED: similar to TBP-associate... 50 1e-04
gi|26340678|dbj|BAC34001.1| unnamed protein product [Mus musculus] 50 1e-04
gi|26345424|dbj|BAC36363.1| unnamed protein product [Mus musculus] 50 2e-04
gi|27666416|ref|XP_234348.1| similar to taube nuss [Rattus norve... 49 3e-04
gi|48101769|ref|XP_395210.1| similar to ENSANGP00000016698 [Apis... 49 3e-04
gi|50798212|ref|XP_428334.1| PREDICTED: similar to TAFII140 prot... 49 4e-04
gi|39583069|emb|CAE60609.1| Hypothetical protein CBG04249 [Caeno... 45 0.006
gi|39583071|emb|CAE60611.1| Hypothetical protein CBG04252 [Caeno... 45 0.006
gi|41107674|gb|AAH65457.1| Unknown (protein for MGC:77837) [Dani... 40 0.15
gi|41053603|ref|NP_956580.1| similar to taube nuss [Danio rerio]... 40 0.15
gi|7522539|pir||T38618 probable splicosome associated RNA bindin... 39 0.34
gi|26399889|sp|O14102|SP49_SCHPO Spliceosome-associated protein 49 39 0.34
gi|18846043|ref|NP_572129.1| ORF 73; extensive acidic domains, p... 39 0.58
gi|23508971|ref|NP_701639.1| 101 kd malaria antigen [Plasmodium ... 37 1.3
gi|7493929|pir||JW0067 chitinase (EC 3.2.1.14) A - Emericella ni... 37 1.3
gi|28975395|gb|AAO61783.1| chromo-helicase DNA-binding protein [... 37 1.7
gi|50553414|ref|XP_504118.1| hypothetical protein [Yarrowia lipo... 37 1.7
gi|49096246|ref|XP_409583.1| hypothetical protein AN5446.2 [Aspe... 37 2.2
gi|32416052|ref|XP_328504.1| predicted protein [Neurospora crass... 36 2.9
gi|19173310|ref|NP_597113.1| hypothetical protein [Encephalitozo... 36 3.8
gi|31219331|ref|XP_316786.1| ENSANGP00000010365 [Anopheles gambi... 36 3.8
gi|46107418|ref|XP_380768.1| hypothetical protein FG00592.1 [Gib... 36 3.8
gi|31242853|ref|XP_321857.1| ENSANGP00000020306 [Anopheles gambi... 35 4.9
gi|23485626|gb|EAA20503.1| C2 domain, putative [Plasmodium yoeli... 35 6.4
gi|45384402|ref|NP_990272.1| chromo-helicase-DNA-binding on the ... 35 6.4
gi|34851186|ref|XP_346518.1| hypothetical protein XP_346517 [Rat... 35 6.4
gi|50086174|ref|YP_047684.1| hypothetical protein ACIAD3174 [Aci... 35 6.4
gi|37546310|ref|XP_291322.2| similar to KIAA2001 protein [Homo s... 35 6.4
gi|21693148|dbj|BAC02710.1| KIAA2001 protein [Homo sapiens] 35 6.4
gi|50302291|ref|XP_451080.1| unnamed protein product [Kluyveromy... 35 6.4
gi|38103658|gb|EAA50334.1| hypothetical protein MG04093.4 [Magna... 35 8.4
gi|39590498|emb|CAE66238.1| Hypothetical protein CBG11482 [Caeno... 35 8.4
gi|11994733|dbj|BAB03062.1| unnamed protein product [Arabidopsis... 35 8.4
gi|48847100|ref|ZP_00301358.1| COG2885: Outer membrane protein a... 35 8.4
gi|34908612|ref|NP_915653.1| P0677H08.6 [Oryza sativa (japonica ... 35 8.4
gi|7158835|gb|AAF37556.1| p101/acidic basic repeat antigen [Plas... 35 8.4
>gi|17550332|ref|NP_510657.1| TBP-Associated transcription Factor
family member (taf-3) [Caenorhabditis elegans]
gi|7495864|pir||T19199 hypothetical protein C11G6.1 - Caenorhabditis
elegans
gi|3874241|emb|CAA94111.1| Hypothetical protein C11G6.1
[Caenorhabditis elegans]
Length = 643
Score = 960 bits (2482), Expect = 0.0
Identities = 505/643 (78%), Positives = 505/643 (78%)
Frame = +1
Query: 1 MEESQSLSAHDFAVYKLQDTCKSILRDFGFTSVAQSANSKLAALLRSKINEYAHSTRAFM 180
MEESQSLSAHDFAVYKLQDTCKSILRDFGFTSVAQSANSKLAALLRSKINEYAHSTRAFM
Sbjct: 1 MEESQSLSAHDFAVYKLQDTCKSILRDFGFTSVAQSANSKLAALLRSKINEYAHSTRAFM 60
Query: 181 ELAGRTKPVTNDVIAAFKHQKVSLPDLKDYAKQVKSEMLHALPVIPVPDQEIAKSDDNFF 360
ELAGRTKPVTNDVIAAFKHQKVSLPDLKDYAKQVKSEMLHALPVIPVPDQEIAKSDDNFF
Sbjct: 61 ELAGRTKPVTNDVIAAFKHQKVSLPDLKDYAKQVKSEMLHALPVIPVPDQEIAKSDDNFF 120
Query: 361 RSMYGPKPSEKELEERREHIPSHFRALHPEWIEEENKEKPPDDTGTRKVVKSAEEREQDE 540
RSMYGPKPSEKELEERREHIPSHFRALHPEWIEEENKEKPPDDTGTRKVVKSAEEREQDE
Sbjct: 121 RSMYGPKPSEKELEERREHIPSHFRALHPEWIEEENKEKPPDDTGTRKVVKSAEEREQDE 180
Query: 541 FNKLKRINTYRRNENPEVQQXXXXXXXXXXXXXXXXXXXNHERFKKGITALPGSTLPNFE 720
FNKLKRINTYRRNENPEVQQ NHERFKKGITALPGSTLPNFE
Sbjct: 181 FNKLKRINTYRRNENPEVQQAREEKERREAEEAAYAKKRNHERFKKGITALPGSTLPNFE 240
Query: 721 DMNFVETGFFKDFEENKRLEAERRLQVQNASKVAPTLPPPVVNKPLPXXXXXXXXXXXXX 900
DMNFVETGFFKDFEENKRLEAERRLQVQNASKVAPTLPPPVVNKPLP
Sbjct: 241 DMNFVETGFFKDFEENKRLEAERRLQVQNASKVAPTLPPPVVNKPLPSFSTDSVSASSSA 300
Query: 901 XXXXXXXXXLGEMAEAFLKNKIFMDTINAYGKSFEHKSPFKDDSGPAFRLSELVKPNKPY 1080
LGEMAEAFLKNKIFMDTINAYGKSFEHKSPFKDDSGPAFRLSELVKPNKPY
Sbjct: 301 SASIMASPSLGEMAEAFLKNKIFMDTINAYGKSFEHKSPFKDDSGPAFRLSELVKPNKPY 360
Query: 1081 LKLPGTXXXXXXXXXXXXXXXXXIGTPTXXXXXXXXXXXXXXXXXXTVPKPKGRPPKKAT 1260
LKLPGT IGTPT TVPKPKGRPPKKAT
Sbjct: 361 LKLPGTGSNPGSAPSSRPGSSMSIGTPTKVKGLPGRPKKPKPEGVVTVPKPKGRPPKKAT 420
Query: 1261 LEKRKRLSEQIIAXXXXXXXXXXXXXXXXXXXXXXXXXXXTLAEEIRDQLLRAKSKIVLP 1440
LEKRKRLSEQIIA TLAEEIRDQLLRAKSKIVLP
Sbjct: 421 LEKRKRLSEQIIAQQQKKLDEFKEEKEKQEKTSDKKPKKQTLAEEIRDQLLRAKSKIVLP 480
Query: 1441 NSVVAPIQTTLPPAQQPATATGMVSLTIAPILVPQTSMEPATSVPVVGATVDIDSAPFLL 1620
NSVVAPIQTTLPPAQQPATATGMVSLTIAPILVPQTSMEPATSVPVVGATVDIDSAPFLL
Sbjct: 481 NSVVAPIQTTLPPAQQPATATGMVSLTIAPILVPQTSMEPATSVPVVGATVDIDSAPFLL 540
Query: 1621 AEPALEVEIKTEDQFPEGPSSSVAADTTLEFGEDQXXXXXXXXXXXXXXXXXXXXXXXXX 1800
AEPALEVEIKTEDQFPEGPSSSVAADTTLEFGEDQ
Sbjct: 541 AEPALEVEIKTEDQFPEGPSSSVAADTTLEFGEDQEKKPKKEKRDKSSEEYKEYKRLKKE 600
Query: 1801 XXXXXXXXXXSAENCVKIEKEKTSTPVKQEDVPGWWLLGEFLV 1929
SAENCVKIEKEKTSTPVKQEDVPGWWLLGEFLV
Sbjct: 601 KRRKEREERKSAENCVKIEKEKTSTPVKQEDVPGWWLLGEFLV 643