Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C14A4_6
(645 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17531759|ref|NP_496284.1| ribonuclease (23.0 kD) (2K883) [Cae... 437 e-121
gi|39597415|emb|CAE59645.1| Hypothetical protein CBG03059 [Caeno... 392 e-108
gi|20070392|ref|NP_613052.1| exosome component 5 [Mus musculus] ... 102 8e-21
gi|21706518|gb|AAH34358.1| DNA segment, Chr 7, Wayne State Unive... 102 8e-21
gi|14043511|gb|AAH07742.1| Exosome component Rrp46 [Homo sapiens] 100 2e-20
gi|47174864|ref|NP_064543.3| exosome component Rrp46 [Homo sapie... 100 2e-20
gi|21693160|gb|AAM75154.1| chronic myelogenous leukemia tumor an... 100 2e-20
gi|27676672|ref|XP_218343.1| similar to DNA segment, Chr 7, Wayn... 91 2e-17
gi|31198127|ref|XP_308011.1| ENSANGP00000019439 [Anopheles gambi... 87 2e-16
gi|16183595|gb|AAL13710.1| GM01970p [Drosophila melanogaster] 84 2e-15
gi|24645688|ref|NP_650001.2| CG4043-PA [Drosophila melanogaster]... 83 4e-15
gi|11498104|ref|NP_069329.1| ribonuclease PH (rph) [Archaeoglobu... 74 2e-12
gi|15920655|ref|NP_376324.1| 247aa long hypothetical ribonucleas... 73 4e-12
gi|15897636|ref|NP_342241.1| Ribonuclease PH (rph) [Sulfolobus s... 72 7e-12
gi|21228725|ref|NP_634647.1| Ribonuclease [Methanosarcina mazei ... 69 8e-11
gi|9506689|ref|NP_061910.1| exosome component 4; exosome complex... 69 1e-10
gi|33411774|emb|CAD58792.1| putative exosome complex exonuclease... 68 1e-10
gi|48837580|ref|ZP_00294553.1| COG0689: RNase PH [Methanosarcina... 68 1e-10
gi|39587718|emb|CAE58656.1| Hypothetical protein CBG01825 [Caeno... 67 3e-10
gi|24584046|ref|NP_609618.2| CG15481-PA [Drosophila melanogaster... 66 5e-10
gi|17946442|gb|AAL49254.1| RE67757p [Drosophila melanogaster] 66 5e-10
gi|41152247|ref|NP_957033.1| putative exosome complex exonucleas... 65 9e-10
gi|34866849|ref|XP_216949.2| similar to putative exosome complex... 65 9e-10
gi|29611663|ref|NP_780608.1| exosome complex exonuclease RRP41 [... 65 9e-10
gi|15231368|ref|NP_190207.1| 3' exoribonuclease family domain 1-... 65 9e-10
gi|14520826|ref|NP_126301.1| ribonuclease PH [Pyrococcus abyssi ... 65 1e-09
gi|17538326|ref|NP_502520.1| ribonuclease PH-like (26.1 kD) (4N8... 65 1e-09
gi|14591333|ref|NP_143411.1| hypothetical protein PH1549 [Pyroco... 64 2e-09
gi|18977940|ref|NP_579297.1| ribonuclease ph [Pyrococcus furiosu... 64 2e-09
gi|19114994|ref|NP_594082.1| putative ribonuclease PH-like [Schi... 64 3e-09
gi|50556492|ref|XP_505654.1| hypothetical protein [Yarrowia lipo... 64 3e-09
gi|31240059|ref|XP_320443.1| ENSANGP00000017010 [Anopheles gambi... 63 4e-09
gi|7435290|pir||T11740 hypothetical protein - fission yeast (Sch... 63 6e-09
gi|45184858|ref|NP_982576.1| AAR035Cp [Eremothecium gossypii] >g... 62 9e-09
gi|14601412|ref|NP_147949.1| ribonuclease PH [Aeropyrum pernix K... 62 1e-08
gi|18313178|ref|NP_559845.1| 3' exoribonuclease family protein [... 62 1e-08
gi|42567185|ref|NP_194479.2| 3' exoribonuclease family domain 1-... 61 2e-08
gi|49092976|ref|XP_407949.1| hypothetical protein AN3812.2 [Aspe... 60 3e-08
gi|15233167|ref|NP_191721.1| exonuclease RRP41 (RRP41) [Arabidop... 60 5e-08
gi|50725627|dbj|BAD33094.1| putative ribonuclease PH [Oryza sati... 60 5e-08
gi|41469640|gb|AAS07363.1| putative exoribonuclease [Oryza sativ... 59 1e-07
gi|33944337|ref|XP_340316.1| ribosomal RNA processing protein RR... 58 1e-07
gi|29126348|gb|AAO66540.1| putative exosome component [Oryza sat... 57 2e-07
gi|32409023|ref|XP_324992.1| hypothetical protein [Neurospora cr... 57 4e-07
gi|46142152|ref|ZP_00204178.1| COG0689: RNase PH [Methanococcoid... 55 9e-07
gi|46135695|ref|XP_389539.1| hypothetical protein FG09363.1 [Gib... 55 9e-07
gi|15678710|ref|NP_275826.1| ribonuclease PH [Methanothermobacte... 55 1e-06
gi|26452638|dbj|BAC43402.1| unknown protein [Arabidopsis thaliana] 55 1e-06
gi|13541138|ref|NP_110826.1| RNase PH [Thermoplasma volcanium GS... 55 2e-06
gi|16082286|ref|NP_394747.1| RNase PH (yeast SIK6) related prote... 55 2e-06
gi|19112052|ref|NP_595260.1| hypothetical protein [Schizosacchar... 54 2e-06
gi|49073220|ref|XP_400842.1| hypothetical protein UM03227.1 [Ust... 54 3e-06
gi|47848476|dbj|BAD22331.1| putative ribonuclease PH [Oryza sati... 52 8e-06
gi|50307027|ref|XP_453491.1| unnamed protein product [Kluyveromy... 50 3e-05
gi|37362654|ref|NP_011609.2| Ribosomal RNA Processing; Rrp46p [S... 50 4e-05
gi|1723689|sp|P53256|RR46_YEAST Exosome complex exonuclease RRP4... 50 4e-05
gi|32398930|emb|CAD98395.1| ribonuclease PH-like protein, possib... 49 6e-05
gi|50307491|ref|XP_453725.1| unnamed protein product [Kluyveromy... 49 8e-05
gi|46444644|gb|EAL03917.1| hypothetical protein CaO19.4582 [Cand... 49 1e-04
gi|38109224|gb|EAA55128.1| hypothetical protein MG06785.4 [Magna... 49 1e-04
gi|45185722|ref|NP_983438.1| ACR035Wp [Eremothecium gossypii] >g... 48 1e-04
gi|50550057|ref|XP_502501.1| hypothetical protein [Yarrowia lipo... 48 1e-04
gi|41615042|ref|NP_963540.1| NEQ248 [Nanoarchaeum equitans Kin4-... 48 2e-04
gi|46108418|ref|XP_381267.1| hypothetical protein FG01091.1 [Gib... 47 2e-04
gi|50258723|gb|EAL21408.1| hypothetical protein CNBD1030 [Crypto... 46 7e-04
gi|23484066|gb|EAA19527.1| exonuclease RRP41, putative [Plasmodi... 46 7e-04
gi|23509478|ref|NP_702145.1| exosome complex exonuclease rrp41, ... 45 0.001
gi|14250906|emb|CAC39258.1| Rrp41p homologue [Trypanosoma brucei] 45 0.001
gi|50258761|gb|EAL21446.1| hypothetical protein CNBD1410 [Crypto... 45 0.002
gi|19074636|ref|NP_586142.1| BELONGS TO THE RNASE PH (EXOSOME) F... 45 0.002
gi|46226980|gb|EAK87946.1| RPR46-like RNAse PH domain [Cryptospo... 44 0.003
gi|50427437|ref|XP_462331.1| unnamed protein product [Debaryomyc... 43 0.006
gi|50288675|ref|XP_446767.1| unnamed protein product [Candida gl... 42 0.008
gi|6321634|ref|NP_011711.1| superkiller; ExtraCellular Mutant; R... 42 0.008
gi|23099059|ref|NP_692525.1| polyribonucleotide nucleotidyltrans... 42 0.008
gi|47220383|emb|CAF98482.1| unnamed protein product [Tetraodon n... 42 0.008
gi|15241441|ref|NP_196962.1| polyribonucleotide nucleotidyltrans... 42 0.010
gi|46112873|ref|ZP_00181963.2| COG1185: Polyribonucleotide nucle... 41 0.017
gi|48844906|ref|ZP_00299199.1| COG1185: Polyribonucleotide nucle... 40 0.030
gi|47569084|ref|ZP_00239773.1| polyribonucleotide nucleotidyltra... 40 0.039
gi|21401790|ref|NP_657775.1| RNase_PH, 3' exoribonuclease family... 40 0.039
gi|30021896|ref|NP_833527.1| Polyribonucleotide nucleotidyltrans... 40 0.039
gi|42782895|ref|NP_980142.1| polyribonucleotide nucleotidyltrans... 40 0.039
gi|25136928|emb|CAD56698.1| exosome-associated protein 4 [Trypan... 39 0.066
gi|48477466|ref|YP_023172.1| ribonuclease PH [Picrophilus torrid... 39 0.066
gi|34557289|ref|NP_907104.1| NUCLEOTIDYLTRANSFERASE [Wolinella s... 39 0.066
gi|50738289|ref|XP_419282.1| PREDICTED: similar to polyribonucle... 39 0.066
gi|38099358|gb|EAA46715.1| hypothetical protein MG09936.4 [Magna... 39 0.066
gi|16078732|ref|NP_389551.1| polynucleotide phosphorylase (PNPas... 39 0.066
gi|28210966|ref|NP_781910.1| polyribonucleotide nucleotidyltrans... 39 0.066
gi|18310662|ref|NP_562596.1| polyribonucleotide nucleotidyltrans... 39 0.066
gi|32420521|ref|XP_330704.1| predicted protein [Neurospora crass... 39 0.086
gi|33242368|ref|NP_877309.1| polyribonucleotide nucleotidyltrans... 39 0.086
gi|15618907|ref|NP_225193.1| Polyribonucleotide Nucleotidyltrans... 39 0.086
gi|12835817|dbj|BAB23374.1| unnamed protein product [Mus musculus] 39 0.11
gi|49073021|ref|XP_400760.1| hypothetical protein UM03145.1 [Ust... 39 0.11
gi|29840519|ref|NP_829625.1| polyribonucleotide nucleotidyltrans... 38 0.15
gi|24213647|ref|NP_711128.1| Polyribonucleotide nucleotidyltrans... 38 0.19
gi|42520733|ref|NP_966648.1| polyribonucleotide nucleotidyltrans... 37 0.25
gi|23113751|ref|ZP_00099101.1| COG1185: Polyribonucleotide nucle... 37 0.33
gi|49236849|ref|ZP_00330905.1| COG0689: RNase PH [Moorella therm... 37 0.33
gi|16800436|ref|NP_470704.1| polynucleotide phosphorylase (PNPas... 36 0.56
gi|16803371|ref|NP_464856.1| polynucleotide phosphorylase (PNPas... 36 0.56
gi|46907557|ref|YP_013946.1| polyribonucleotide nucleotidyltrans... 36 0.56
gi|29653650|ref|NP_819342.1| ribonuclease PH [Coxiella burnetii ... 36 0.73
gi|15605577|ref|NP_220363.1| Polyribonucleotide Nucleotidyltrans... 36 0.73
gi|27904826|ref|NP_777952.1| polyribonucleotide nucleotidyltrans... 36 0.73
gi|16768780|gb|AAL28609.1| LD03255p [Drosophila melanogaster] 35 0.95
gi|46578918|ref|YP_009726.1| polyribonucleotide nucleotidyltrans... 35 0.95
gi|20807834|ref|NP_623005.1| Polyribonucleotide nucleotidyltrans... 35 0.95
gi|25012192|gb|AAN71212.1| GM16802p [Drosophila melanogaster] 35 0.95
gi|24651641|ref|NP_651867.2| CG11337-PA [Drosophila melanogaster... 35 0.95
gi|39938737|ref|NP_950503.1| polyribonucleotide nucleotidyltrans... 35 0.95
gi|15614970|ref|NP_243273.1| polynucleotide phosphorylase [Bacil... 35 1.2
gi|19113410|ref|NP_596618.1| low similarity to ribonuclease ph-l... 35 1.2
gi|15616978|ref|NP_240191.1| polyribonucleotide nucleotidyltrans... 35 1.2
gi|48859197|ref|ZP_00313135.1| COG1185: Polyribonucleotide nucle... 35 1.2
gi|39996693|ref|NP_952644.1| polyribonucleotide nucleotidyltrans... 35 1.2
gi|25028424|ref|NP_738478.1| putative guanosine pentaphosphate s... 35 1.2
gi|42632644|gb|AAS22253.1| polynucleotide phosphorylase [Aster y... 35 1.2
gi|22536387|ref|NP_687238.1| polyribonucleotide nucleotidyltrans... 35 1.6
gi|25010273|ref|NP_734668.1| polynucleotide phosphorylase, alpha... 35 1.6
gi|47847669|dbj|BAD21450.1| putative polyribonucleotide nucleoti... 34 2.1
gi|47218201|emb|CAF97065.1| unnamed protein product [Tetraodon n... 34 2.1
gi|15605776|ref|NP_213153.1| polyribonucleotide nucleotidyltrans... 34 2.1
gi|46308430|ref|ZP_00210623.1| COG1185: Polyribonucleotide nucle... 34 2.1
gi|50119101|ref|YP_048268.1| ribonuclease PH [Erwinia carotovora... 34 2.1
gi|50843137|ref|YP_056364.1| probable ribonuclease PH [Propionib... 34 2.1
gi|26249747|ref|NP_755787.1| Polyribonucleotide nucleotidyltrans... 34 2.8
gi|50418995|ref|XP_458018.1| unnamed protein product [Debaryomyc... 34 2.8
gi|15673837|ref|NP_268012.1| polyribonucleotide nucleotidyltrans... 34 2.8
gi|46226443|gb|EAK87443.1| archeo-eukaryotic exosomal RNAse, tra... 34 2.8
gi|27262520|gb|AAN87541.1| Polyribonucleotide nucleotidyltransfe... 34 2.8
gi|48477465|ref|YP_023171.1| ribonuclease PH [Picrophilus torrid... 34 2.8
gi|48824146|ref|ZP_00285564.1| COG1185: Polyribonucleotide nucle... 34 2.8
gi|15029403|gb|AAK81870.1| polynucleotide phosphorylase [Salmone... 34 2.8
gi|33151538|ref|NP_872891.1| ribonuclease PH; tRNA nucleotidyltr... 34 2.8
gi|7447094|pir||H65106 polyribonucleotide nucleotidyltransferase... 34 2.8
gi|15803706|ref|NP_289740.1| polynucleotide phosphorylase; cytid... 34 2.8
gi|49176320|ref|NP_417633.3| polynucleotide phosphorylase; cytid... 34 2.8
gi|16766580|ref|NP_462195.1| polynucleotide phosphorylase [Salmo... 34 2.8
gi|1172545|sp|P05055|PNP_ECOLI Polyribonucleotide nucleotidyltra... 34 2.8
gi|16762047|ref|NP_457664.1| polynucleotide phosphorylase [Salmo... 34 2.8
gi|21231940|ref|NP_637857.1| polynucleotide phosphorylase [Xanth... 33 3.6
gi|48853121|ref|ZP_00307302.1| COG2123: RNase PH-related exoribo... 33 3.6
gi|18313177|ref|NP_559844.1| 3' exoribonuclease family protein [... 33 3.6
gi|24308348|ref|NP_149100.1| polyribonucleotide nucleotidyltrans... 33 3.6
gi|24943088|gb|AAK13047.1| 3'-5' RNA exonuclease [Homo sapiens] 33 3.6
gi|22124608|ref|NP_668031.1| polynucleotide phosphorylase [Yersi... 33 3.6
gi|14042110|dbj|BAB55109.1| unnamed protein product [Homo sapiens] 33 3.6
gi|23336421|ref|ZP_00121639.1| COG1185: Polyribonucleotide nucle... 33 3.6
gi|16123636|ref|NP_406949.1| polyribonucleotide nucleotidyltrans... 33 3.6
gi|24114455|ref|NP_708965.1| polynucleotide phosphorylase; cytid... 33 4.7
gi|42526551|ref|NP_971649.1| polyribonucleotide nucleotidyltrans... 33 4.7
gi|21672636|ref|NP_660703.1| polyribonucleotide nucleotidyltrans... 33 4.7
gi|50086419|ref|YP_047929.1| excinuclease ABC subunit A [Acineto... 33 4.7
gi|15597658|ref|NP_251152.1| hypothetical protein [Pseudomonas a... 33 4.7
gi|30064504|ref|NP_838675.1| polynucleotide phosphorylase [Shige... 33 4.7
gi|15895084|ref|NP_348433.1| Polyribonucleotide nucleotidyltrans... 33 4.7
gi|31231375|ref|XP_318517.1| ENSANGP00000021260 [Anopheles gambi... 33 4.7
gi|24378670|ref|NP_720625.1| polyribonucleotide nucleotidyltrans... 33 4.7
gi|32042610|ref|ZP_00140193.1| COG3210: Large exoproteins involv... 33 4.7
gi|6006870|gb|AAF00646.1| putative polynucleotide phosphorylase ... 33 4.7
gi|15639871|ref|NP_219321.1| polyribonucleotide nucleotidyltrans... 33 4.7
gi|7413616|emb|CAB85703.1| putative polynucleotide phosphorylase... 33 4.7
gi|30678905|ref|NP_187021.2| polyribonucleotide nucleotidyltrans... 33 4.7
gi|21243412|ref|NP_642994.1| polynucleotide phosphorylase [Xanth... 33 6.2
gi|48860489|ref|ZP_00314414.1| COG0689: RNase PH [Clostridium th... 33 6.2
gi|46912242|emb|CAG19037.1| putative polyribonucleotide nucleoti... 33 6.2
gi|8928245|sp|O34275|PNP_YEREN Polyribonucleotide nucleotidyltra... 33 6.2
gi|33332421|gb|AAQ11418.1| PNPase [Yersinia enterocolitica] 33 6.2
gi|24432065|ref|NP_653299.2| hypothetical protein FLJ25124 [Homo... 33 6.2
gi|23466837|ref|ZP_00122424.1| COG1185: Polyribonucleotide nucle... 33 6.2
gi|15640667|ref|NP_230296.1| polyribonucleotide nucleotidyltrans... 33 6.2
gi|25188204|ref|NP_082145.1| polynucleotide phosphorylase; 3'-5'... 33 6.2
gi|37528344|ref|NP_931689.1| polyribonucleotide nucleotidyltrans... 33 6.2
gi|28871621|ref|NP_794240.1| polyribonucleotide nucleotidyltrans... 33 6.2
gi|23470960|ref|ZP_00126292.1| COG1185: Polyribonucleotide nucle... 33 6.2
gi|8928246|sp|O87792|PNP_PSEPU Polyribonucleotide nucleotidyltra... 33 6.2
gi|26991392|ref|NP_746817.1| polyribonucleotide nucleotidyltrans... 33 6.2
gi|48732412|ref|ZP_00266155.1| COG1185: Polyribonucleotide nucle... 33 6.2
gi|32034381|ref|ZP_00134571.1| COG1185: Polyribonucleotide nucle... 33 6.2
gi|37528679|ref|NP_932024.1| ribonuclease PH (RNase PH) (tRNA nu... 33 6.2
gi|2462716|emb|CAA71697.1| pnp [Yersinia enterocolitica] 33 6.2
gi|29377522|ref|NP_816676.1| polyribonucleotide nucleotidyltrans... 32 8.0
gi|2129483|pir||S64680 exoribonuclease 100 RNP - spinach 32 8.0
gi|1588265|prf||2208281A 100RNP protein 32 8.0
gi|50119663|ref|YP_048830.1| polyribonucleotide nucleotidyltrans... 32 8.0
gi|16272192|ref|NP_438401.1| polynucleotide phosphorylase [Haemo... 32 8.0
gi|42629682|ref|ZP_00155227.1| COG1185: Polyribonucleotide nucle... 32 8.0
gi|42630532|ref|ZP_00156071.1| COG1185: Polyribonucleotide nucle... 32 8.0
gi|16762575|ref|NP_458192.1| RNase PH [Salmonella enterica subsp... 32 8.0
gi|41724610|ref|ZP_00151447.1| COG1185: Polyribonucleotide nucle... 32 8.0
gi|32035564|ref|ZP_00135495.1| COG0689: RNase PH [Actinobacillus... 32 8.0
gi|16120397|ref|NP_403710.1| ribonuclease PH [Yersinia pestis] >... 32 8.0
gi|8102038|gb|AAF72714.1| ribonuclease PH [Carnobacterium sp. St2] 32 8.0
gi|1924972|gb|AAC49669.1| polyribonucleotide phophorylase 32 8.0
gi|32490971|ref|NP_871225.1| pnp [Wigglesworthia glossinidia end... 32 8.0
gi|48868083|ref|ZP_00321470.1| COG1185: Polyribonucleotide nucle... 32 8.0
>gi|17531759|ref|NP_496284.1| ribonuclease (23.0 kD) (2K883)
[Caenorhabditis elegans]
gi|7495958|pir||T19247 hypothetical protein C14A4.5 -
Caenorhabditis elegans
gi|3874232|emb|CAA90109.1| Hypothetical protein C14A4.5
[Caenorhabditis elegans]
gi|31747259|gb|AAP57301.1| cell death-related nuclease 5
[Caenorhabditis elegans]
Length = 214
Score = 437 bits (1123), Expect = e-121
Identities = 214/214 (100%), Positives = 214/214 (100%)
Frame = +1
Query: 1 MAGRLREMRCELSFLKNADGSACFSQGATCIWASCSGPGDVHASKASDEAMTLDISYRAN 180
MAGRLREMRCELSFLKNADGSACFSQGATCIWASCSGPGDVHASKASDEAMTLDISYRAN
Sbjct: 1 MAGRLREMRCELSFLKNADGSACFSQGATCIWASCSGPGDVHASKASDEAMTLDISYRAN 60
Query: 181 CGDNKFNVLNNIIHSTLSNAINLELFPHTTISVTVHGIQDDGSMGAVAINGACFALLDNG 360
CGDNKFNVLNNIIHSTLSNAINLELFPHTTISVTVHGIQDDGSMGAVAINGACFALLDNG
Sbjct: 61 CGDNKFNVLNNIIHSTLSNAINLELFPHTTISVTVHGIQDDGSMGAVAINGACFALLDNG 120
Query: 361 MPFETVFCGVLIVRVKDELIIDPTAKQEAASTGRVLFSVCKGSDGHPEVCAMDAIGHWDF 540
MPFETVFCGVLIVRVKDELIIDPTAKQEAASTGRVLFSVCKGSDGHPEVCAMDAIGHWDF
Sbjct: 121 MPFETVFCGVLIVRVKDELIIDPTAKQEAASTGRVLFSVCKGSDGHPEVCAMDAIGHWDF 180
Query: 541 IQLEAAWSLAQPSASAIFDFYKTVMKRKLSVDEQ 642
IQLEAAWSLAQPSASAIFDFYKTVMKRKLSVDEQ
Sbjct: 181 IQLEAAWSLAQPSASAIFDFYKTVMKRKLSVDEQ 214