Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C15F1_1
(4428 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17536595|ref|NP_495426.1| membrane protein mediating cell com... 2805 0.0
gi|7206596|gb|AAF39756.1| Transformer : xx animals transformed i... 2011 0.0
gi|2499021|sp|Q17307|TRA2_CAEBR SEX-DETERMINING TRANSFORMER PROT... 1104 0.0
gi|8037588|gb|AAF71402.1| TRA-2A [Caenorhabditis remanei] 1047 0.0
gi|39590265|emb|CAE66003.1| Hypothetical protein CBG11194 [Caeno... 753 0.0
gi|39590264|emb|CAE66002.1| Hypothetical protein CBG11193 [Caeno... 268 9e-70
gi|20069301|gb|AAM09773.1| TRA-2 [Caenorhabditis elegans] 257 2e-66
gi|20069311|gb|AAM09778.1| TRA-2 [Caenorhabditis elegans] 255 8e-66
gi|20069321|gb|AAM09783.1| TRA-2 [Caenorhabditis elegans] 252 5e-65
gi|20069327|gb|AAM09786.1| TRA-2 [Caenorhabditis elegans] 248 1e-63
gi|20069333|gb|AAM09789.1| TRA-2 [Caenorhabditis elegans] 246 3e-63
gi|20069319|gb|AAM09782.1| TRA-2 [Caenorhabditis elegans] 246 4e-63
gi|20069323|gb|AAM09784.1| TRA-2 [Caenorhabditis elegans] 239 6e-61
gi|20069305|gb|AAM09775.1| TRA-2 [Caenorhabditis elegans] 237 2e-60
gi|20069307|gb|AAM09776.1| TRA-2 [Caenorhabditis elegans] 226 4e-57
gi|20069297|gb|AAM09771.1| TRA-2 [Caenorhabditis elegans] >gnl|B... 226 4e-57
gi|20069331|gb|AAM09788.1| TRA-2 [Caenorhabditis elegans] 224 1e-56
gi|20069299|gb|AAM09772.1| TRA-2 [Caenorhabditis elegans] >gnl|B... 223 3e-56
gi|20069329|gb|AAM09787.1| TRA-2 [Caenorhabditis elegans] 219 4e-55
gi|20069303|gb|AAM09774.1| TRA-2 [Caenorhabditis elegans] 194 2e-47
gi|8037589|gb|AAF71403.1| TRA-2B [Caenorhabditis remanei] 144 1e-32
gi|17570131|ref|NP_509979.1| predicted CDS, tra-2 Related on X, ... 119 9e-25
gi|20069160|gb|AAM09705.1| tra-2 [Caenorhabditis briggsae] >gnl|... 95 1e-17
gi|20069158|gb|AAM09704.1| tra-2 [Caenorhabditis briggsae] >gnl|... 94 3e-17
gi|20069221|gb|AAM09734.1| tra-2 [Caenorhabditis remanei] 94 3e-17
gi|20069227|gb|AAM09737.1| tra-2 [Caenorhabditis remanei] 94 3e-17
gi|20069223|gb|AAM09735.1| tra-2 [Caenorhabditis remanei] 92 9e-17
gi|20069235|gb|AAM09741.1| tra-2 [Caenorhabditis remanei] 92 1e-16
gi|20069239|gb|AAM09743.1| tra-2 [Caenorhabditis remanei] 92 1e-16
gi|20069241|gb|AAM09744.1| tra-2 [Caenorhabditis remanei] 92 1e-16
gi|20069233|gb|AAM09740.1| tra-2 [Caenorhabditis remanei] 92 1e-16
gi|20069237|gb|AAM09742.1| tra-2 [Caenorhabditis remanei] 92 1e-16
gi|20069231|gb|AAM09739.1| tra-2 [Caenorhabditis remanei] 91 2e-16
gi|20069225|gb|AAM09736.1| tra-2 [Caenorhabditis remanei] 89 1e-15
gi|20069229|gb|AAM09738.1| tra-2 [Caenorhabditis remanei] 85 2e-14
gi|20069243|gb|AAM09745.1| tra-2 [Caenorhabditis remanei] 81 2e-13
gi|17570133|ref|NP_510059.1| predicted CDS, MX region of TRA-2 R... 60 5e-07
gi|47228251|emb|CAG07646.1| unnamed protein product [Tetraodon n... 49 0.001
gi|17537717|ref|NP_494384.1| patched family member (ptc-3) [Caen... 49 0.001
gi|17537719|ref|NP_494383.1| patched family member (ptc-3) [Caen... 49 0.001
gi|18859285|ref|NP_571063.1| patched1; etID309849.2 [Danio rerio... 43 0.078
gi|39584667|emb|CAE72420.1| Hypothetical protein CBG19582 [Caeno... 42 0.10
gi|48139426|ref|XP_397007.1| similar to putative hedgehog recept... 42 0.13
gi|47506910|gb|AAH70995.1| Unknown (protein for MGC:79874) [Xeno... 42 0.17
gi|11463863|dbj|BAB18575.1| patched-2 [Xenopus laevis] 41 0.23
gi|15426026|gb|AAK97655.1| patched 2 [Gallus gallus] 40 0.39
gi|47212609|emb|CAF93285.1| unnamed protein product [Tetraodon n... 40 0.39
gi|99861|pir||S20790 extensin - almond >gnl|BL_ORD_ID|432680 gi|... 40 0.51
gi|34870361|ref|XP_345571.1| similar to putative twelve transmem... 40 0.51
gi|4588015|gb|AAD25953.1| patched 2 [Homo sapiens] 40 0.66
gi|12643356|sp|Q9Y6C5|PTC2_HUMAN Patched protein homolog 2 (PTC2... 40 0.66
gi|46109344|ref|XP_381730.1| hypothetical protein FG01554.1 [Gib... 40 0.66
gi|4325111|gb|AAD17260.1| patched 2 [Homo sapiens] 40 0.66
gi|6679517|ref|NP_032984.1| patched homolog 2 [Mus musculus] >gn... 40 0.66
gi|31227677|ref|XP_317925.1| ENSANGP00000011383 [Anopheles gambi... 39 1.1
gi|15792200|ref|NP_282023.1| para-aminobenzoate synthase compone... 39 1.1
gi|11466216|ref|NP_066539.1| haem lyase [Naegleria gruberi] >gnl... 39 1.5
gi|38106569|gb|EAA52860.1| hypothetical protein MG05988.4 [Magna... 39 1.5
gi|13194564|gb|AAK15463.1| patched-1 [Xenopus laevis] 38 1.9
gi|22538486|ref|NP_003729.2| patched 2; patched (Drosophila) hom... 38 1.9
gi|39591139|emb|CAE58919.1| Hypothetical protein CBG02178 [Caeno... 38 1.9
gi|17535373|ref|NP_495662.1| patched family member (ptc-1) [Caen... 38 1.9
gi|13434992|dbj|BAB18574.2| patched-1 [Xenopus laevis] 38 1.9
gi|29840260|ref|NP_829366.1| conserved hypothetical protein [Chl... 38 2.5
gi|2119755|pir||S51798 gamma-kafirin precursor - sorghum 37 4.3
gi|170156|gb|AAA73078.1| [Sorghum bicolor endosperm tissue mRNA,... 37 4.3
gi|45681150|ref|ZP_00192593.1| COG0600: ABC-type nitrate/sulfona... 37 4.3
gi|45645344|gb|AAS73290.1| gamma kafirin protein [Sorghum bicolor] 37 4.3
gi|671656|emb|CAA44347.1| gamma-kafirin preprotein [Sorghum bico... 37 4.3
gi|45645342|gb|AAS73289.1| gamma kafirin protein [Sorghum bicolor] 37 4.3
gi|4539024|emb|CAB39726.1| patched-2 protein [Danio rerio] 37 5.6
gi|6980181|gb|AAF23275.2| KIAA0998 [Homo sapiens] 37 5.6
gi|3929235|gb|AAC79847.1| receptor protein patched 2 [Homo sapie... 37 5.6
gi|45384440|ref|NP_990291.1| patched protein [Gallus gallus] >gn... 37 5.6
gi|23612730|ref|NP_704269.1| hypothetical protein [Plasmodium fa... 37 5.6
gi|50302337|ref|XP_451103.1| unnamed protein product [Kluyveromy... 37 5.6
gi|37182233|gb|AAQ88919.1| Patched 2 [Homo sapiens] 37 5.6
gi|50658079|ref|NP_055887.3| KIAA0998 [Homo sapiens] 37 5.6
gi|12053127|emb|CAB66742.1| hypothetical protein [Homo sapiens] ... 37 5.6
gi|4589640|dbj|BAA76842.1| KIAA0998 protein [Homo sapiens] 37 5.6
gi|34559495|gb|AAP75557.1| SRC1 and TIF2 associated binding prot... 37 5.6
gi|42733675|gb|AAO50853.2| similar to Dictyostelium discoideum (... 36 7.3
gi|46432129|gb|EAK91630.1| hypothetical protein CaO19.1822 [Cand... 36 7.3
gi|39597594|emb|CAE59824.1| Hypothetical protein CBG03294 [Caeno... 36 7.3
gi|7506738|pir||T32404 hypothetical protein R148.3 - Caenorhabdi... 36 9.6
gi|9845382|ref|NP_064196.1| pr95.1 [Rat cytomegalovirus] >gnl|BL... 36 9.6
gi|32565309|ref|NP_871687.1| putative membrane protein, with 5 c... 36 9.6
gi|48101710|ref|XP_395191.1| similar to ENSANGP00000021314 [Apis... 36 9.6
gi|46432139|gb|EAK91639.1| hypothetical protein CaO19.9381 [Cand... 36 9.6
gi|49116908|gb|AAH73735.1| Unknown (protein for MGC:84554) [Xeno... 36 9.6
>gi|17536595|ref|NP_495426.1| membrane protein mediating cell
communication, sex-determining gene, promotes female
development family member, TRAnsformer : XX animals
transformed into males TRA-2 (170.4 kD) (tra-2)
[Caenorhabditis elegans]
gi|464914|sp|P34709|TRA2_CAEEL Sex-determining transformer protein 2
precursor
gi|477641|pir||A60026 cell communication-mediating membrane protein
pTra2A - Caenorhabditis elegans
gi|253437|gb|AAB22845.1| pTra2A [Caenorhabditis elegans]
gi|304341|gb|AAA28150.1| membrane protein
gi|7206595|gb|AAF39755.1| Transformer : xx animals transformed into
males protein 2, isoform a [Caenorhabditis elegans]
Length = 1475
Score = 2805 bits (7270), Expect = 0.0
Identities = 1405/1475 (95%), Positives = 1405/1475 (95%)
Frame = -1
Query: 4428 MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEKSIFPSFVSQGFFETRTNNEEYII 4249
MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEKSIFPSFVSQGFFETRTNNEEYII
Sbjct: 1 MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEKSIFPSFVSQGFFETRTNNEEYII 60
Query: 4248 EKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQSSS 4069
EKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQSSS
Sbjct: 61 EKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQSSS 120
Query: 4068 SDQNEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLRNSY 3889
SDQNEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLRNSY
Sbjct: 121 SDQNEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLRNSY 180
Query: 3888 IEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIEPRQ 3709
IEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIEPRQ
Sbjct: 181 IEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIEPRQ 240
Query: 3708 KTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNLDCVDDQEQ 3529
KTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNLDCVDDQEQ
Sbjct: 241 KTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNLDCVDDQEQ 300
Query: 3528 FIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQFD 3349
FIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQFD
Sbjct: 301 FIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQFD 360
Query: 3348 TMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEETEKFKENRMS 3169
TMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEETEKFKENRMS
Sbjct: 361 TMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEETEKFKENRMS 420
Query: 3168 KMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSGAPLRSAFMFFVR 2989
KMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSGAPLRSAFMFFVR
Sbjct: 421 KMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSGAPLRSAFMFFVR 480
Query: 2988 DALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERLSRCIQREKRFP 2809
DALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERLSRCIQREKRFP
Sbjct: 481 DALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERLSRCIQREKRFP 540
Query: 2808 INSNFASLITVDTMTDSRQIQYFLSTVTKYQAAQDSYSNELFERFPKNWGCTSILIFPIV 2629
INSNFASLITVDTMTDSRQIQYFLSTVTKYQAAQDSYSNELFERFPKNWGCTSILIFPIV
Sbjct: 541 INSNFASLITVDTMTDSRQIQYFLSTVTKYQAAQDSYSNELFERFPKNWGCTSILIFPIV 600
Query: 2628 FVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQAKQRLENEEQAESITG 2449
FVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQAKQRLENEEQAESITG
Sbjct: 601 FVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQAKQRLENEEQAESITG 660
Query: 2448 SSLEKLFAGNKPVSNTDKANIVKKSSIIRNQKPCLQDLSPGTYDVSNFMKYPHQASRIFR 2269
SSLEKLFAGNKPVSNTDKANIVKKSSIIRNQKPCLQDLSPGTYDVSNFMKYPHQASRIFR
Sbjct: 661 SSLEKLFAGNKPVSNTDKANIVKKSSIIRNQKPCLQDLSPGTYDVSNFMKYPHQASRIFR 720
Query: 2268 EKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETLHTDSKQXXXXXXXXXF 2089
EKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETLHTDSKQ F
Sbjct: 721 EKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETLHTDSKQDDIFIEFEIF 780
Query: 2088 NFSTNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQETNKNASAEWNILFKWIND 1909
NFSTNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQETNKNASAEWNILFKWIND
Sbjct: 781 NFSTNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQETNKNASAEWNILFKWIND 840
Query: 1908 EPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEIVQKIDELLSKCSKNLSP 1729
EPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEIVQKIDELLSKCSKNLSP
Sbjct: 841 EPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEIVQKIDELLSKCSKNLSP 900
Query: 1728 KAVGVLYEHYHRIAVVWNLFAFNQLTXXXXXXXXXXXXXXXXXXXXXXXXXFLFSLLVVG 1549
KAVGVLYEHYHRIAVVWNLFAFNQLT FLFSLLVVG
Sbjct: 901 KAVGVLYEHYHRIAVVWNLFAFNQLTTAGIFIILLSIITFIFAITPTIKATFLFSLLVVG 960
Query: 1548 TQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRYRRRILYKSETRRTPELAS 1369
TQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRYRRRILYKSETRRTPELAS
Sbjct: 961 TQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRYRRRILYKSETRRTPELAS 1020
Query: 1368 KRRVLLPIVATADIAQFFVLLITAFSILAIICSIVPELNIFFVPTVILIVIQIVAVFNSI 1189
KRRVLLPIVATADIAQFFVLLITAFSILAIICSIVPELNIFFVPTVILIVIQIVAVFNSI
Sbjct: 1021 KRRVLLPIVATADIAQFFVLLITAFSILAIICSIVPELNIFFVPTVILIVIQIVAVFNSI 1080
Query: 1188 IVSIATKQMFESEVRHYLHRDLRGSTTAVRVYNLVQKQRLASSLDEPQVELDEFSIKRSS 1009
IVSIATKQMFESEVRHYLHRDLRGSTTAVRVYNLVQKQRLASSLDEPQVELDEFSIKRSS
Sbjct: 1081 IVSIATKQMFESEVRHYLHRDLRGSTTAVRVYNLVQKQRLASSLDEPQVELDEFSIKRSS 1140
Query: 1008 PPCRYYAPPPKYSCKKXXXXXXXXXXXDPNQPGPSNRRSPKTGNKRVRGNGDNTELYIPN 829
PPCRYYAPPPKYSCKK DPNQPGPSNRRSPKTGNKRVRGNGDNTELYIPN
Sbjct: 1141 PPCRYYAPPPKYSCKKRSRSSDEDEDSDPNQPGPSNRRSPKTGNKRVRGNGDNTELYIPN 1200
Query: 828 RYELIVSGKSVGGNTSAAWNGPGSTLEQNMNALEECFELGVDEYDFDEHDGDEGCELVQD 649
RYELIVSGKSVGGNTSAAWNGPGSTLEQNMNALEECFELGVDEYDFDEHDGDEGCELVQD
Sbjct: 1201 RYELIVSGKSVGGNTSAAWNGPGSTLEQNMNALEECFELGVDEYDFDEHDGDEGCELVQD 1260
Query: 648 MLDRERNLMNKRSTAQRRESRNIEKMKKSQENLDXXXXXXXXXXXXKNQDDSIESPNLPG 469
MLDRERNLMNKRSTAQRRESRNIEKMKKSQENLD KNQDDSIESPNLPG
Sbjct: 1261 MLDRERNLMNKRSTAQRRESRNIEKMKKSQENLDKEKSEEKISESKKNQDDSIESPNLPG 1320
Query: 468 TPANLPVDEPLPPVGRLYIVEHVLPEEYRRDPLTEPPSMEDCIRAHSDPNLPPHPRADQY 289
TPANLPVDEPLPPVGRLYIVEHVLPEEYRRDPLTEPPSMEDCIRAHSDPNLPPHPRADQY
Sbjct: 1321 TPANLPVDEPLPPVGRLYIVEHVLPEEYRRDPLTEPPSMEDCIRAHSDPNLPPHPRADQY 1380
Query: 288 PASFTRPMVEYCEDIYWTHRTGQLPPGLQVPRRPYDYYHITERTPPPEDLNWVXXXXXXX 109
PASFTRPMVEYCEDIYWTHRTGQLPPGLQVPRRPYDYYHITERTPPPEDLNWV
Sbjct: 1381 PASFTRPMVEYCEDIYWTHRTGQLPPGLQVPRRPYDYYHITERTPPPEDLNWVPPAESPP 1440
Query: 108 XXXXXXAFDLLEERRRNHREQQDEAREGDLSDPEV 4
AFDLLEERRRNHREQQDEAREGDLSDPEV
Sbjct: 1441 IPIPQQAFDLLEERRRNHREQQDEAREGDLSDPEV 1475
>gi|7206596|gb|AAF39756.1| Transformer : xx animals transformed into
males protein 2, isoform b [Caenorhabditis elegans]
Length = 1147
Score = 2011 bits (5209), Expect = 0.0
Identities = 1011/1052 (96%), Positives = 1012/1052 (96%)
Frame = -1
Query: 4428 MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEKSIFPSFVSQGFFETRTNNEEYII 4249
MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEKSIFPSFVSQGFFETRTNNEEYII
Sbjct: 1 MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEKSIFPSFVSQGFFETRTNNEEYII 60
Query: 4248 EKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQSSS 4069
EKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQSSS
Sbjct: 61 EKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQSSS 120
Query: 4068 SDQNEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLRNSY 3889
SDQNEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLRNSY
Sbjct: 121 SDQNEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLRNSY 180
Query: 3888 IEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIEPRQ 3709
IEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIEPRQ
Sbjct: 181 IEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIEPRQ 240
Query: 3708 KTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNLDCVDDQEQ 3529
KTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNLDCVDDQEQ
Sbjct: 241 KTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNLDCVDDQEQ 300
Query: 3528 FIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQFD 3349
FIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQFD
Sbjct: 301 FIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQFD 360
Query: 3348 TMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEETEKFKENRMS 3169
TMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEETEKFKENRMS
Sbjct: 361 TMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEETEKFKENRMS 420
Query: 3168 KMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSGAPLRSAFMFFVR 2989
KMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSGAPLRSAFMFFVR
Sbjct: 421 KMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSGAPLRSAFMFFVR 480
Query: 2988 DALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERLSRCIQREKRFP 2809
DALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERLSRCIQREKRFP
Sbjct: 481 DALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERLSRCIQREKRFP 540
Query: 2808 INSNFASLITVDTMTDSRQIQYFLSTVTKYQAAQDSYSNELFERFPKNWGCTSILIFPIV 2629
INSNFASLITVDTMTDSRQIQYFLSTVTKYQAAQDSYSNELFERFPKNWGCTSILIFPIV
Sbjct: 541 INSNFASLITVDTMTDSRQIQYFLSTVTKYQAAQDSYSNELFERFPKNWGCTSILIFPIV 600
Query: 2628 FVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQAKQRLENEEQAESITG 2449
FVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQAKQRLENEEQAESITG
Sbjct: 601 FVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQAKQRLENEEQAESITG 660
Query: 2448 SSLEKLFAGNKPVSNTDKANIVKKSSIIRNQKPCLQDLSPGTYDVSNFMKYPHQASRIFR 2269
SSLEKLFAGNKPVSNTDKANIVKKSSIIRNQKPCLQDLSPGTYDVSNFMKYPHQASRIFR
Sbjct: 661 SSLEKLFAGNKPVSNTDKANIVKKSSIIRNQKPCLQDLSPGTYDVSNFMKYPHQASRIFR 720
Query: 2268 EKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETLHTDSKQXXXXXXXXXF 2089
EKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETLHTDSKQ F
Sbjct: 721 EKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETLHTDSKQDDIFIEFEIF 780
Query: 2088 NFSTNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQETNKNASAEWNILFKWIND 1909
NFSTNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQETNKNASAEWNILFKWIND
Sbjct: 781 NFSTNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQETNKNASAEWNILFKWIND 840
Query: 1908 EPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEIVQKIDELLSKCSKNLSP 1729
EPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEIVQKIDELLSKCSKNLSP
Sbjct: 841 EPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEIVQKIDELLSKCSKNLSP 900
Query: 1728 KAVGVLYEHYHRIAVVWNLFAFNQLTXXXXXXXXXXXXXXXXXXXXXXXXXFLFSLLVVG 1549
KAVGVLYEHYHRIAVVWNLFAFNQLT FLFSLLVVG
Sbjct: 901 KAVGVLYEHYHRIAVVWNLFAFNQLTTAGIFIILLSIITFIFAITPTIKATFLFSLLVVG 960
Query: 1548 TQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRYRRRILYKSETRRTPELAS 1369
TQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRYRRRILYKSETRRTPELAS
Sbjct: 961 TQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRYRRRILYKSETRRTPELAS 1020
Query: 1368 KRRVLLPIVATADIAQFFVLLITAFSILAIIC 1273
KRRVLLPIVATADIAQFFVLLIT F + C
Sbjct: 1021 KRRVLLPIVATADIAQFFVLLITEFPKREVTC 1052
>gi|2499021|sp|Q17307|TRA2_CAEBR SEX-DETERMINING TRANSFORMER PROTEIN 2
PRECURSOR
gi|7451531|pir||S72250 sex-determining transformer protein 2A -
Caenorhabditis briggsae
gi|1401285|gb|AAB49333.1| Cb-TRA-2A
Length = 1497
Score = 1104 bits (2855), Expect = 0.0
Identities = 624/1528 (40%), Positives = 908/1528 (58%), Gaps = 54/1528 (3%)
Frame = -1
Query: 4428 MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEK--SIFPSFVSQGFFETRTNNEEY 4255
MKL +NKLLV+ V+ T ++FGLLLA F + + + P F + E++
Sbjct: 1 MKLAFNKLLVASVVFTVLSFGLLLASLFTTTATTPSEWTILLPEFRFP--VNKKQTMEQF 58
Query: 4254 IIEKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQS 4075
++EKI E G D+RS L+ T HGY +N I+N+K+ +RQK+YT+NDVCFKPH IF+
Sbjct: 59 LVEKIVHEHEEGEDVRSALYLTHHGYFMNAIANMKVTYRQKSYTVNDVCFKPHSAIFENV 118
Query: 4074 SSSDQ-NEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLR 3898
+ + ++ P Y QRLLLEMQRLSPCLIVTPLNCFYD Y IH EISNWN +TD+LNRRLR
Sbjct: 119 PAPENIDKLPAYFQRLLLEMQRLSPCLIVTPLNCFYDSYHIHSEISNWNASTDYLNRRLR 178
Query: 3897 NSYIEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIE 3718
NSY+EAI E D RPYVKS YGP LIK WA HMF +PSK +N +K L+ ++K WL SI
Sbjct: 179 NSYLEAIEEKDSRPYVKSTYGPELIKEWARHMFAIPSKPLSNFSKSDLYSRVKTWLSSIA 238
Query: 3717 PRQKTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKT---KFKLEDVDEEFAMNLDC 3547
R+K CA + SCD LD+E+YFN+CT MQ ++++ E++ KF+LE DEEF LDC
Sbjct: 239 ARKKICADPMRSCDETLDAENYFNVCTVMQQINDYDERRKQRLKFQLEYGDEEFTTRLDC 298
Query: 3546 VDDQEQFIEWMQELEIR---KMYSHVTEKPDYPNVVNQTCDKIFHDLN-STGIEFFDGSR 3379
V+D+E+FIEWMQE +R K+++ E PD+ + NQ CD I+HDL+ S+G+E F G+R
Sbjct: 299 VEDREKFIEWMQERNLRDMLKLFASSVEIPDHKEIPNQVCDGIYHDLDTSSGLELFRGAR 358
Query: 3378 SFSSTKSQFDTMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEE 3199
SFS+ S +DT+ E+ +TPE LL+ M+HSDFVNGFESIWTIE+A EL++EFRLALK E
Sbjct: 359 SFSNNTSAYDTINVELGFMTPENLLTTMRHSDFVNGFESIWTIERARELLNEFRLALKVE 418
Query: 3198 TEKFKENRMSKMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSGAP 3019
KF E+R S+ ++VT+R+++ E I+F++ +L+V LF F +S A
Sbjct: 419 VTKFSESRSSRRVKVTTRIVNQIEEEGSDEEMEYHMIYFILGACALMVALFAAFAFSEAF 478
Query: 3018 LRSAFMFFVRDALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERLS 2839
L S MF +R +T LLF F+C + G+I++D+ + YI + NL T R +F R+
Sbjct: 479 LTSLSMFLLRGFITGLLFIFLCKSGGLILIDSNFLCYITMHLAFNLVMTARVTFICYRIG 538
Query: 2838 RCIQREKRFPINSNFASL--ITVDTMTDS---RQIQYFLSTVTKYQAAQDSYSNELFERF 2674
C+Q EK F + SNF+SL + VD++ + R +QY L+ TK+Q AQD+YS E FE+
Sbjct: 539 GCVQSEKDF-VKSNFSSLGSVPVDSLKEDSCKRHVQYVLAKYTKFQVAQDAYSEEPFEKL 597
Query: 2673 PKNWGCTSILIFPIVFVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQA 2494
PK W +I++ P++ VYW+FIDS+ KIC+ +LP+F +AA EE+ KN +ER +A
Sbjct: 598 PKYWFLIAIVLVPVIGVYWFFIDSDVQKICIVLLPAFLIAAFEEMRVKNQLLRERRIKKA 657
Query: 2493 KQRLENEEQAESITGSSLEKLFAGNKPVSNTDKANIVKKSSIIRNQKPC-LQDLSPGTYD 2317
QRL+ EE ++ ++ L +GN +S +K++ K ++ + L +LS TYD
Sbjct: 658 IQRLQKEENTRIMSRGEIDNLLSGNAELSG-EKSHYESKQGVLHHGSAGGLFELSRSTYD 716
Query: 2316 VSNFMKYPHQASRIFREKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETL 2137
VS M YP+Q R R +G Y R+ K++ V++ A LLI++SIGLLFIPV+R ++
Sbjct: 717 VSLIMAYPNQMIRNLRLCALGAYFRLFKMKYCAVVVSSVAALLILLSIGLLFIPVQRSSV 776
Query: 2136 HTDSKQXXXXXXXXXFNFSTN-WKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQET 1960
+ +Q N S++ W+ +N+ L++F+ +I+SI L TI+NW+KSF+R+E+
Sbjct: 777 PKELQQDELSIDFAIPNVSSSSWESINEYLEEFNSEIDSITNLQTITNWKKSFDRYERRI 836
Query: 1959 NKNASAEWNILFKWINDEPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEI 1780
+N++++ N KW++DEPI+ +T + + NPF+F+ RYGFD+ ++T+I++
Sbjct: 837 YQNSTSKINNFLKWVDDEPISWYLTAPLTRPYRKTHLPNPFRFQFRYGFDSIQKSTIIDV 896
Query: 1779 VQKIDELLSKCSKNLS-PKAVGVLYEHYHRIAVVWNLFAFNQLTXXXXXXXXXXXXXXXX 1603
V++ID LL+K ++ LS PKA+G LYEHYH+ AVVWN FA++++
Sbjct: 897 VERIDTLLTKYTETLSFPKAIGFLYEHYHQKAVVWNSFAYHEIFAAAVLAGFFSIIVVFF 956
Query: 1602 XXXXXXXXXFLFSLLVVGTQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRY 1423
F+ VVG ++E+AA+V LFSL++HQ YTN+A+F GFLAAW PFC L R+
Sbjct: 957 SIGPVVLPTLAFAFFVVGNRLEIAAIVSLFSLEYHQCYTNVAVFVGFLAAWTPFCDLARF 1016
Query: 1422 RRRILYKSETRRTPELASKRRVLLPIVATADIAQFFVLLITAFSILAIICSIVPELNIFF 1243
R R+LYK +TRRTPELA++RR+ +P VA D Q F + +TA +L +I +I+P+ FF
Sbjct: 1017 RGRLLYKDQTRRTPELATQRRIRVPHVAAVDTVQIFAIFLTATILLIVITAIIPQFRAFF 1076
Query: 1242 VPTVILIVIQIVAVFNSIIVSIATKQMFESEVRHYLHRDLRGSTTAVRVYNLVQKQRLAS 1063
+PTVIL++ ++AVFNS+ VS+A QMFE EVRH H L+ TT +V ++ +K+ L
Sbjct: 1077 IPTVILLITLLLAVFNSLAVSLAAYQMFEHEVRHCYHDQLQSLTTTGKVCDMTRKKLLPR 1136
Query: 1062 SLDEPQVELDEFSIKRSSPPCRYYAP-------PPKYSCKKXXXXXXXXXXXDPNQPGPS 904
++ + ++EFSI R + ++YAP PP+ + + Q
Sbjct: 1137 E-EDLSIPMEEFSI-RPTENTKHYAPRPIDNSDPPEQAADEEVVNQDPSMEAARRQYVEF 1194
Query: 903 NRRSPKTGNKRVRGNGDNTELY------IPNRYELIVSGKSVGGNTSAAWNGPGSTLEQN 742
R+ + + DN ++ +PN + L G + N PG
Sbjct: 1195 THRTTGMPIELINQFVDNFPVFNVPANFLPNYFAL--GGAPLDANNGVLLRQPGIAPPPR 1252
Query: 741 MNALE---ECFELGVDEYDFD-EHDGDEGCELVQDMLDRERNLMNKRSTAQRRESRNIEK 574
N E E F LG E D GD+ + D ++ + + +T + E E
Sbjct: 1253 PNREEDEEERFGLGGGEDDDSYPSSGDD----IGDPAKEQQEVTDDVATRYKEE----EV 1304
Query: 573 MKKSQENLDXXXXXXXXXXXXKNQDDSIESPNLPGTPANLPVDEPLPPVGR--------- 421
KK Q + N DD PN+PG P+N PV + V R
Sbjct: 1305 RKKVQPAVP-------------NYDD----PNVPG-PSN-PVPRQVEQVSREAPEDSPNR 1345
Query: 420 ---LYIVE-----HVLPE-EYRRDPLTEPPSMEDCIRAHSDPNLPPHPRADQYPASFTRP 268
+ + + H +P+ + R+PL +PPSME+ ++ + DPN PP RADQYP SFT
Sbjct: 1346 EPRILVYQRPPRLHEIPQISHGRNPLHDPPSMEEYVQKYDDPNQPPSRRADQYPPSFTPA 1405
Query: 267 MVEYCEDIYWTHRTGQLPPGLQVPRRPYDY-YHITERTPPPEDLNWVXXXXXXXXXXXXX 91
MV YCED+YW + LP + +P RP D+ PPPED + V
Sbjct: 1406 MVGYCEDVYWKYNERNLPDNVPMPPRPRDWDQRRLVELPPPEDFDEVPPPGRSAIPIPPG 1465
Query: 90 AFDLLEERRRNHREQQDEAREGDLSDPE 7
A L E RR H +Q EAR P+
Sbjct: 1466 AIRLRERRREQHLREQ-EARRNRPESPD 1492
>gi|8037588|gb|AAF71402.1| TRA-2A [Caenorhabditis remanei]
Length = 1485
Score = 1047 bits (2707), Expect = 0.0
Identities = 602/1505 (40%), Positives = 876/1505 (58%), Gaps = 43/1505 (2%)
Frame = -1
Query: 4428 MKLKYNKLLVSVVIVTFVTFGLLLAECFGK-----SIDYQEKSIFPSFVSQGFFETRTNN 4264
M L+ NKLLV+ VI T VTFGLLL S+ Y I P F Q E ++N
Sbjct: 1 MSLRSNKLLVAAVIFTVVTFGLLLTSSIFNNKTTTSLTYG--GILPKF-GQRIIEKKSN- 56
Query: 4263 EEYIIEKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIF 4084
EEYIIEKI TQ++G D+RST + T H YLL N++ +++K K +++ND+C+KPH IF
Sbjct: 57 EEYIIEKIEHTQKDGEDVRSTRYLTHHSYLLRNLAKMEVKHHGKDFSINDICYKPHNAIF 116
Query: 4083 QQSSSSDQ-NEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKN--TDFL 3913
+ + + + ++ P+Y+QRL+LE QRLSPCLIVTPLNC++D YRIH E+S WN + T+FL
Sbjct: 117 ETTFAPENIDKLPNYLQRLILEAQRLSPCLIVTPLNCYHDSYRIHSEMSKWNTSNVTNFL 176
Query: 3912 NRRLRNSYIEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLW 3733
NR+LRNSYI+AIGE++ERPY+KS YGP LIK WA MF LPSK ++ +K L KI+LW
Sbjct: 177 NRKLRNSYIDAIGESEERPYIKSTYGPDLIKEWAHLMFKLPSKQTSSFSKKDLSSKIELW 236
Query: 3732 LLSIEPRQKTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNL 3553
L SIE + ++ P + ++YF+ICT MQ V +F E+K KF L D D+EF + L
Sbjct: 237 LSSIESK-----TNLTELGRPSEVDNYFDICTSMQQVHDFDERKRKFGLYDDDDEFLIGL 291
Query: 3552 DCVDDQEQFIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSF 3373
DCV+++ +FIEW+QE E+R + KP PN Q CD IF NS G+EFF G+RSF
Sbjct: 292 DCVENKTKFIEWIQERELRGV-----SKPFNPN---QQCDGIFK--NSEGLEFFYGTRSF 341
Query: 3372 SSTKSQFDTMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEETE 3193
+ + FD M+TEI L+TPE +L+ M HSDFVNGFESIWTIE+A+EL+ +FRLA+++E +
Sbjct: 342 GNNTAPFDKMKTEIGLMTPEQILTTMLHSDFVNGFESIWTIERAQELLDDFRLAIRQEVK 401
Query: 3192 KFKENRMSKMIRVTSRVLDNTVTTKLQ---SFSEKQTIHFVVNVHSLIVILFTIFVWSGA 3022
+F ENR S I + +RV+ + + + S + ++F++ + +++I F F WS
Sbjct: 402 RFNENRSSLKIGIDTRVVQREESNETELEISSNLDSVVYFILFIRCVLLIFFAFFAWSVN 461
Query: 3021 PLRSAFMFFVRDALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERL 2842
PLRSA MF VRDALT LLF +C +DG I L++EL+ YII+LT+ N Y TTR S+ +R
Sbjct: 462 PLRSAVMFLVRDALTSLLFSILCKSDGQIELNSELLGYIILLTIVNTYLTTRVSWYKDRN 521
Query: 2841 SRCIQREKRFPINSNFASLITVDTMT---DSRQIQYFLSTVTKYQAAQDSYSNELFERFP 2671
CIQR K FP SNF+ L ++D++ DSRQ+QY L+ ++KY A D+YS E F + P
Sbjct: 522 ETCIQRAKDFPSRSNFSLLFSIDSLRENCDSRQLQYALAKLSKYLTALDTYSTETFMQLP 581
Query: 2670 KNWGCTSILIFPIVFVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQAK 2491
W SIL PI YWYF+D N KI V +LPSF +A E+ + KER+A +
Sbjct: 582 NYWPFISILFVPITGCYWYFVDINLPKISVVLLPSFIVATIEQRQVEKSLLKERKAKKEF 641
Query: 2490 QRLENEEQAESITGSSLEKLFAGNKPVSNTDKANIVKKSSIIRNQKPCLQDLSPGTYDVS 2311
Q+++ ++ + ++ ++++L +GN K K I + L +LS +YDVS
Sbjct: 642 QKVQKKKMEKFLSDGAVDRLLSGNSESVEDKKLYKSKDCVIHKESAGRLYELSRSSYDVS 701
Query: 2310 NFMKYPHQASRIFREKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETLHT 2131
M YP+Q R FR +G Y ++KL++ G++L A+L +++S+ ++ IP++R +L
Sbjct: 702 KIMAYPNQRVRDFRFDALGCYFWLMKLKSAGILLYGSAVLFVLLSVAVMLIPIQRTSLQK 761
Query: 2130 DSKQXXXXXXXXXFNFSTNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQETNKN 1951
D N S++W +N+NL F+ +I+SI +L TISNW+K F+RFE KN
Sbjct: 762 DMNNEVYFGFSIN-NMSSDWANINKNLHAFNSEIDSIQSLQTISNWKKGFDRFEGRFYKN 820
Query: 1950 AS--AEWNILFKWINDEPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKN-ETTVIEI 1780
+S ++ N +W+N EPIN +V + S I +PFKFR RY + N E+ VI+
Sbjct: 821 SSRISDANDYVEWMNQEPINWSVMAPLTRISPKFGIPSPFKFRFRYQIEVNNNESEVIDT 880
Query: 1779 VQKIDELLSKCSKNLSPKAV-GVLYEHYHRIAVVWNLFAFNQLTXXXXXXXXXXXXXXXX 1603
VQ+ID LL+K LS V GVLYE+YH A VWN F FN+L
Sbjct: 881 VQRIDTLLTKYKGTLSSPIVDGVLYEYYHGNAAVWNSFVFNELLASGILSAFFALIVVIF 940
Query: 1602 XXXXXXXXXFLFSLLVVGTQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRY 1423
+FS V+G+++E+AA++ LFSLD+ Q+YT+ A+ GFL AW PF L +
Sbjct: 941 SITPSISSVLIFSFFVIGSRLEIAAVISLFSLDNQQLYTDSAVLVGFLVAWAPFYELSLF 1000
Query: 1422 RRRILYKSETRRTPELASKRRVLLPIVATADIAQFFVLLITAFSILAIICSIVPELNIFF 1243
RRR+LYK +TR TPEL+S +R+ P D AQ F +++ A I+A++ +VPE FF
Sbjct: 1001 RRRLLYKLKTRCTPELSSGKRIRPPFTKAVDTAQVFAIVLAASLIIAVVAGVVPEFQKFF 1060
Query: 1242 VPTVILIVIQIVAVFNSIIVSIATKQMFESEVRHYLHR--DLRGSTTAVRVYNLVQKQRL 1069
PTVILIV+Q+VA NSI V +AT QMFE EVR++L +L TTA +V ++ QK +
Sbjct: 1061 WPTVILIVVQLVAFGNSIAVLVATNQMFEREVRNFLDNEFELGNGTTAGQVCHMAQK-LI 1119
Query: 1068 ASSLDEPQVELDEFSIKRSSPPCRYYAPPPKYSCKKXXXXXXXXXXXDPNQPGPSNRR-S 892
D P + +++F I R + ++YAPPP K N+ P +
Sbjct: 1120 PPKYDIP-IPMNDFHI-RPTNMSKFYAPPPAKKRAKQTN----------NETDPEKKEDE 1167
Query: 891 PKTGNKRVRGNGDNTELYIPNRYELIVSGKSVGGNTSA--AWNGPGSTLEQNMNALEECF 718
P T N + + ++ G V T + NGP + + E
Sbjct: 1168 PGTSNANNVSQEEAAHRLAILPWHFVLGGIPVDLTTRSDQIINGPFIGISSDAMRTHEIN 1227
Query: 717 ELGVDEYDFDEHDGDEGCEL----VQDMLDRERNLMN-----KRSTAQRRESRNIEKMKK 565
D+ D+ E E +++ E N+++ ++ A++ + +++
Sbjct: 1228 SELEDQDDYSSESSVEDVESDPAPEEEIKYHEENMLHMIEKVQKDAAEKEAKEKVHQVES 1287
Query: 564 SQE---NLDXXXXXXXXXXXXKNQDDSIESPNLPGTPANLPVDEPLPPVGRLYIVEHVLP 394
+Q N D +N ++ I + +P P P+PP + + P
Sbjct: 1288 AQRRAPNFDDPNVAGPSHRYQRN-EERISTDIVPADPPREIPANPVPPPTHVLVQRAPRP 1346
Query: 393 EE--------YRRDPLTEPPSMEDCIRAHSDPNLPPHPRADQYPASFTRPMVEYCEDIYW 238
E RDP TEPP++++CI+ + DP+LPPHPR QYP + R M+ YCED+YW
Sbjct: 1347 HEMPPVIDRTIPRDPRTEPPNLQECIQQNDDPSLPPHPRRHQYPDHYGRAMISYCEDVYW 1406
Query: 237 THRTGQLPPGLQVPRRPYDYYHITERTPPPEDLNWVXXXXXXXXXXXXXAFDLLEERRRN 58
T+ G+LPP + +P RP+D+++ R PPED N+V A L EER R
Sbjct: 1407 TYNDGRLPPNVAMPPRPFDWHY--RRVAPPEDFNYVPPPGQPSIPIPAEAMALREERARA 1464
Query: 57 HREQQ 43
HREQ+
Sbjct: 1465 HREQE 1469
>gi|39590265|emb|CAE66003.1| Hypothetical protein CBG11194
[Caenorhabditis briggsae]
Length = 1349
Score = 753 bits (1945), Expect = 0.0
Identities = 410/935 (43%), Positives = 589/935 (62%), Gaps = 18/935 (1%)
Frame = -1
Query: 4428 MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEK--SIFPSFVSQGFFETRTNNEEY 4255
MKL +NKLLV+ V+ T ++FGLLLA F + + + P F + E++
Sbjct: 422 MKLAFNKLLVASVVFTVLSFGLLLASLFTTTATTPSEWTILLPEFRFP--VNKKQTTEQF 479
Query: 4254 IIEKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQS 4075
++EKI E G D+RS L+ T HGY +N I+N+K+ +RQK+YT+NDVCFKPH IF+
Sbjct: 480 LVEKIVHEHEEGEDVRSALYLTHHGYFMNAIANMKVTYRQKSYTVNDVCFKPHSAIFENV 539
Query: 4074 SSSDQ-NEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLR 3898
+ + ++ P Y QRLLLEMQRLSPCLIVTPLNCFYD Y IH EISNWN +TD+LNRRLR
Sbjct: 540 PAPENIDKLPAYFQRLLLEMQRLSPCLIVTPLNCFYDSYHIHSEISNWNASTDYLNRRLR 599
Query: 3897 NSYIEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIE 3718
NSY+EAI E D RPYVKS YGP LIK WA HMF +PSK +N +K L+ ++K WL SI
Sbjct: 600 NSYLEAIEEKDSRPYVKSTYGPELIKEWARHMFAIPSKPLSNFSKSDLYSRVKTWLSSIA 659
Query: 3717 PRQKTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNLDCVDD 3538
R+K CA + SCD LD+E+YFN+CT MQ ++++ E++ +F+LE DEEF LDCV+D
Sbjct: 660 ARKKICADPMRSCDETLDAENYFNVCTVMQQINDYDERRKQFQLEYGDEEFTTRLDCVED 719
Query: 3537 QEQFIEWMQELEIR---KMYSHVTEKPDYPNVVNQTCDKIFHDLN-STGIEFFDGSRSFS 3370
+E+FIEWMQE +R K+++ E PD+ + NQ CD I+HDL+ S+G+E F G+RSFS
Sbjct: 720 REKFIEWMQERNLRDMLKLFASSVEIPDHKEIPNQVCDGIYHDLDTSSGLELFRGARSFS 779
Query: 3369 STKSQFDTMQTEIVLLTPEMLLSAM-----QHSDFVNGFESIWTIEKAEELIHEFRLALK 3205
+ S +DT+ E+ +TPE LL+ M +HSDFVNGFESIWTIE+A EL++EFRLALK
Sbjct: 780 NNTSAYDTINVELGFMTPENLLTTMVMSRDRHSDFVNGFESIWTIERARELLNEFRLALK 839
Query: 3204 EETEKFKENRMSKMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSG 3025
E KF E+R S+ ++VT+R+++ E I+F++ +L+V LF F +S
Sbjct: 840 VEVTKFSESRSSRRVKVTTRIVNQIEEEGSDEEMEYHMIYFILGACALMVALFAAFAFSE 899
Query: 3024 APLRSAFMFFVRDALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTER 2845
A L S MF +R +T LLF F+C + G+I++D+ + YI + NL T R +F R
Sbjct: 900 AFLTSLSMFLLRGFITGLLFIFLCKSGGLILIDSNFLCYITMHLAFNLVMTARVTFICYR 959
Query: 2844 LSRCIQREKRFPINSNFASLITVDTMTD---SRQIQYFLSTVTKYQAAQDSYSNELFERF 2674
+ C+Q EK F + SNF+SL +VD++ + R +QY L+ TK+Q AQD+YS E FE+
Sbjct: 960 IGGCVQSEKDF-VKSNFSSLGSVDSLKEDSCKRHVQYVLAKYTKFQVAQDAYSEEPFEKL 1018
Query: 2673 PKNWGCTSILIFPIVFVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQA 2494
PK W +I++ P++ VYW+FIDS+ KIC+ +LP+F +AA EE+ KN +ER +A
Sbjct: 1019 PKYWFLIAIVLVPVIGVYWFFIDSDVQKICIVLLPAFLIAAFEEMRVKNQLLRERRIKKA 1078
Query: 2493 KQRLENEEQAESITGSSLEKLFAGNKPVSNTDKANIVKKSSIIRN-QKPCLQDLSPGTYD 2317
QRL+ EE ++ ++ L +GN +S +K++ K ++ + L +LS TYD
Sbjct: 1079 IQRLQKEENTRIMSRGEIDNLLSGNAELSG-EKSHYESKQGVLHHGSAGGLFELSRSTYD 1137
Query: 2316 VSNFMKYPHQASRIFREKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETL 2137
VS M YP+Q R R +G Y R+ K++ V++ A LLI++SIGLLFIPV+R ++
Sbjct: 1138 VSLIMAYPNQMIRNLRLCALGAYFRLFKMKYCAVVVSSVAALLILLSIGLLFIPVQRSSV 1197
Query: 2136 HTDSKQXXXXXXXXXFNF-STNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQET 1960
+ +Q N S++W+ +N+ L++F+ +I+SI L TI+N ++
Sbjct: 1198 PKELQQDELSIDFAIPNVSSSSWESINEYLEEFNSEIDSITNLQTITNGRRVL-----IV 1252
Query: 1959 NKNASAEWNILFKWINDEPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEI 1780
K+ + I P+ S TL S S + I+N +
Sbjct: 1253 TKDGFTSYRITSN--RSSPVPS--TLSSITSIPVRDISN----------------LSTDK 1292
Query: 1779 VQKIDELLSKCSKNLS-PKAVGVLYEHYHRIAVVW 1678
+ +ID LL+K ++ LS PKA+G LYEHYH+ AVVW
Sbjct: 1293 MLRIDTLLTKYTETLSFPKAIGFLYEHYHQKAVVW 1327