Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C15F1_2
(3444 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|7206596|gb|AAF39756.1| Transformer : xx animals transformed i... 2157 0.0
gi|17536595|ref|NP_495426.1| membrane protein mediating cell com... 2011 0.0
gi|2499021|sp|Q17307|TRA2_CAEBR SEX-DETERMINING TRANSFORMER PROT... 944 0.0
gi|8037588|gb|AAF71402.1| TRA-2A [Caenorhabditis remanei] 861 0.0
gi|39590265|emb|CAE66003.1| Hypothetical protein CBG11194 [Caeno... 753 0.0
gi|20069301|gb|AAM09773.1| TRA-2 [Caenorhabditis elegans] 257 1e-66
gi|20069311|gb|AAM09778.1| TRA-2 [Caenorhabditis elegans] 255 6e-66
gi|20069321|gb|AAM09783.1| TRA-2 [Caenorhabditis elegans] 252 4e-65
gi|20069327|gb|AAM09786.1| TRA-2 [Caenorhabditis elegans] 248 9e-64
gi|20069333|gb|AAM09789.1| TRA-2 [Caenorhabditis elegans] 246 2e-63
gi|20069319|gb|AAM09782.1| TRA-2 [Caenorhabditis elegans] 246 3e-63
gi|20069323|gb|AAM09784.1| TRA-2 [Caenorhabditis elegans] 239 4e-61
gi|20069305|gb|AAM09775.1| TRA-2 [Caenorhabditis elegans] 237 2e-60
gi|20069307|gb|AAM09776.1| TRA-2 [Caenorhabditis elegans] 226 3e-57
gi|20069297|gb|AAM09771.1| TRA-2 [Caenorhabditis elegans] >gnl|B... 226 3e-57
gi|20069331|gb|AAM09788.1| TRA-2 [Caenorhabditis elegans] 224 8e-57
gi|20069299|gb|AAM09772.1| TRA-2 [Caenorhabditis elegans] >gnl|B... 223 2e-56
gi|20069329|gb|AAM09787.1| TRA-2 [Caenorhabditis elegans] 219 3e-55
gi|20069303|gb|AAM09774.1| TRA-2 [Caenorhabditis elegans] 194 1e-47
gi|39590264|emb|CAE66002.1| Hypothetical protein CBG11193 [Caeno... 120 2e-25
gi|20069160|gb|AAM09705.1| tra-2 [Caenorhabditis briggsae] >gnl|... 95 1e-17
gi|20069158|gb|AAM09704.1| tra-2 [Caenorhabditis briggsae] >gnl|... 94 2e-17
gi|20069221|gb|AAM09734.1| tra-2 [Caenorhabditis remanei] 94 2e-17
gi|20069227|gb|AAM09737.1| tra-2 [Caenorhabditis remanei] 94 2e-17
gi|20069223|gb|AAM09735.1| tra-2 [Caenorhabditis remanei] 92 7e-17
gi|20069235|gb|AAM09741.1| tra-2 [Caenorhabditis remanei] 92 9e-17
gi|20069239|gb|AAM09743.1| tra-2 [Caenorhabditis remanei] 92 9e-17
gi|20069241|gb|AAM09744.1| tra-2 [Caenorhabditis remanei] 92 9e-17
gi|20069233|gb|AAM09740.1| tra-2 [Caenorhabditis remanei] 92 1e-16
gi|20069237|gb|AAM09742.1| tra-2 [Caenorhabditis remanei] 92 1e-16
gi|20069231|gb|AAM09739.1| tra-2 [Caenorhabditis remanei] 91 1e-16
gi|20069225|gb|AAM09736.1| tra-2 [Caenorhabditis remanei] 89 7e-16
gi|20069229|gb|AAM09738.1| tra-2 [Caenorhabditis remanei] 85 1e-14
gi|20069243|gb|AAM09745.1| tra-2 [Caenorhabditis remanei] 81 2e-13
gi|47228251|emb|CAG07646.1| unnamed protein product [Tetraodon n... 49 8e-04
gi|17537719|ref|NP_494383.1| patched family member (ptc-3) [Caen... 49 0.001
gi|17537717|ref|NP_494384.1| patched family member (ptc-3) [Caen... 49 0.001
gi|18859285|ref|NP_571063.1| patched1; etID309849.2 [Danio rerio... 43 0.060
gi|39584667|emb|CAE72420.1| Hypothetical protein CBG19582 [Caeno... 42 0.078
gi|48139426|ref|XP_397007.1| similar to putative hedgehog recept... 42 0.10
gi|47506910|gb|AAH70995.1| Unknown (protein for MGC:79874) [Xeno... 42 0.13
gi|11463863|dbj|BAB18575.1| patched-2 [Xenopus laevis] 41 0.17
gi|15426026|gb|AAK97655.1| patched 2 [Gallus gallus] 40 0.30
gi|47212609|emb|CAF93285.1| unnamed protein product [Tetraodon n... 40 0.30
gi|34870361|ref|XP_345571.1| similar to putative twelve transmem... 40 0.39
gi|4325111|gb|AAD17260.1| patched 2 [Homo sapiens] 40 0.51
gi|4588015|gb|AAD25953.1| patched 2 [Homo sapiens] 40 0.51
gi|6679517|ref|NP_032984.1| patched homolog 2 [Mus musculus] >gn... 40 0.51
gi|12643356|sp|Q9Y6C5|PTC2_HUMAN Patched protein homolog 2 (PTC2... 40 0.51
gi|15792200|ref|NP_282023.1| para-aminobenzoate synthase compone... 39 0.86
gi|31227677|ref|XP_317925.1| ENSANGP00000011383 [Anopheles gambi... 39 0.86
gi|11466216|ref|NP_066539.1| haem lyase [Naegleria gruberi] >gnl... 39 1.1
gi|38106569|gb|EAA52860.1| hypothetical protein MG05988.4 [Magna... 39 1.1
gi|13434992|dbj|BAB18574.2| patched-1 [Xenopus laevis] 38 1.5
gi|39591139|emb|CAE58919.1| Hypothetical protein CBG02178 [Caeno... 38 1.5
gi|13194564|gb|AAK15463.1| patched-1 [Xenopus laevis] 38 1.5
gi|22538486|ref|NP_003729.2| patched 2; patched (Drosophila) hom... 38 1.5
gi|17535373|ref|NP_495662.1| patched family member (ptc-1) [Caen... 38 1.5
gi|12053127|emb|CAB66742.1| hypothetical protein [Homo sapiens] ... 37 4.3
gi|23612730|ref|NP_704269.1| hypothetical protein [Plasmodium fa... 37 4.3
gi|4539024|emb|CAB39726.1| patched-2 protein [Danio rerio] 37 4.3
gi|34559495|gb|AAP75557.1| SRC1 and TIF2 associated binding prot... 37 4.3
gi|50302337|ref|XP_451103.1| unnamed protein product [Kluyveromy... 37 4.3
gi|45384440|ref|NP_990291.1| patched protein [Gallus gallus] >gn... 37 4.3
gi|3929235|gb|AAC79847.1| receptor protein patched 2 [Homo sapie... 37 4.3
gi|4589640|dbj|BAA76842.1| KIAA0998 protein [Homo sapiens] 37 4.3
gi|37182233|gb|AAQ88919.1| Patched 2 [Homo sapiens] 37 4.3
gi|50658079|ref|NP_055887.3| KIAA0998 [Homo sapiens] 37 4.3
gi|6980181|gb|AAF23275.2| KIAA0998 [Homo sapiens] 37 4.3
gi|42733675|gb|AAO50853.2| similar to Dictyostelium discoideum (... 36 5.6
gi|39597594|emb|CAE59824.1| Hypothetical protein CBG03294 [Caeno... 36 5.6
gi|46432129|gb|EAK91630.1| hypothetical protein CaO19.1822 [Cand... 36 5.6
gi|46432139|gb|EAK91639.1| hypothetical protein CaO19.9381 [Cand... 36 7.3
gi|40804952|gb|AAR91744.1| topoisomerase II [Trichomonas vaginalis] 35 9.5
gi|4883640|gb|AAD31595.1| putative hedgehog receptor [Junonia co... 35 9.5
gi|46431250|gb|EAK90848.1| hypothetical protein CaO19.2629 [Cand... 35 9.5
gi|16805023|ref|NP_473052.1| hypothetical protein [Plasmodium fa... 35 9.5
gi|38106734|gb|EAA53005.1| hypothetical protein MG06133.4 [Magna... 35 9.5
>gi|7206596|gb|AAF39756.1| Transformer : xx animals transformed into
males protein 2, isoform b [Caenorhabditis elegans]
Length = 1147
Score = 2157 bits (5588), Expect = 0.0
Identities = 1082/1147 (94%), Positives = 1082/1147 (94%)
Frame = -1
Query: 3444 MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEKSIFPSFVSQGFFETRTNNEEYII 3265
MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEKSIFPSFVSQGFFETRTNNEEYII
Sbjct: 1 MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEKSIFPSFVSQGFFETRTNNEEYII 60
Query: 3264 EKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQSSS 3085
EKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQSSS
Sbjct: 61 EKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQSSS 120
Query: 3084 SDQNEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLRNSY 2905
SDQNEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLRNSY
Sbjct: 121 SDQNEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLRNSY 180
Query: 2904 IEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIEPRQ 2725
IEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIEPRQ
Sbjct: 181 IEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIEPRQ 240
Query: 2724 KTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNLDCVDDQEQ 2545
KTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNLDCVDDQEQ
Sbjct: 241 KTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNLDCVDDQEQ 300
Query: 2544 FIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQFD 2365
FIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQFD
Sbjct: 301 FIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQFD 360
Query: 2364 TMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEETEKFKENRMS 2185
TMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEETEKFKENRMS
Sbjct: 361 TMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEETEKFKENRMS 420
Query: 2184 KMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSGAPLRSAFMFFVR 2005
KMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSGAPLRSAFMFFVR
Sbjct: 421 KMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSGAPLRSAFMFFVR 480
Query: 2004 DALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERLSRCIQREKRFP 1825
DALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERLSRCIQREKRFP
Sbjct: 481 DALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERLSRCIQREKRFP 540
Query: 1824 INSNFASLITVDTMTDSRQIQYFLSTVTKYQAAQDSYSNELFERFPKNWGCTSILIFPIV 1645
INSNFASLITVDTMTDSRQIQYFLSTVTKYQAAQDSYSNELFERFPKNWGCTSILIFPIV
Sbjct: 541 INSNFASLITVDTMTDSRQIQYFLSTVTKYQAAQDSYSNELFERFPKNWGCTSILIFPIV 600
Query: 1644 FVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQAKQRLENEEQAESITG 1465
FVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQAKQRLENEEQAESITG
Sbjct: 601 FVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQAKQRLENEEQAESITG 660
Query: 1464 SSLEKLFAGNKPVSNTDKANIVKKSSIIRNQKPCLQDLSPGTYDVSNFMKYPHQASRIFR 1285
SSLEKLFAGNKPVSNTDKANIVKKSSIIRNQKPCLQDLSPGTYDVSNFMKYPHQASRIFR
Sbjct: 661 SSLEKLFAGNKPVSNTDKANIVKKSSIIRNQKPCLQDLSPGTYDVSNFMKYPHQASRIFR 720
Query: 1284 EKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETLHTDSKQXXXXXXXXXF 1105
EKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETLHTDSKQ F
Sbjct: 721 EKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETLHTDSKQDDIFIEFEIF 780
Query: 1104 NFSTNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQETNKNASAEWNILFKWIND 925
NFSTNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQETNKNASAEWNILFKWIND
Sbjct: 781 NFSTNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQETNKNASAEWNILFKWIND 840
Query: 924 EPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEIVQKIDELLSKCSKNLSP 745
EPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEIVQKIDELLSKCSKNLSP
Sbjct: 841 EPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEIVQKIDELLSKCSKNLSP 900
Query: 744 KAVGVLYEHYHRIAVVWNLFAFNQLTXXXXXXXXXXXXXXXXXXXXXXXXXFLFSLLVVG 565
KAVGVLYEHYHRIAVVWNLFAFNQLT FLFSLLVVG
Sbjct: 901 KAVGVLYEHYHRIAVVWNLFAFNQLTTAGIFIILLSIITFIFAITPTIKATFLFSLLVVG 960
Query: 564 TQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRYRRRILYKSETRRTPELAS 385
TQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRYRRRILYKSETRRTPELAS
Sbjct: 961 TQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRYRRRILYKSETRRTPELAS 1020
Query: 384 KRRVLLPIVATADIAQFFVLLITEFPKREVTCQNWWXXXXXXXXXXXXXXXXXXXXIILA 205
KRRVLLPIVATADIAQFFVLLITEFPKREVTCQNWW IILA
Sbjct: 1021 KRRVLLPIVATADIAQFFVLLITEFPKREVTCQNWWPFSSSRSSICSFFFHSHPSSIILA 1080
Query: 204 TLSIFRQYIYXXXXXXXXXXXSDVSNKKSRGYCRCMSCFSIFFQRVWPQEHWNTANNEKG 25
TLSIFRQYIY SDVSNKKSRGYCRCMSCFSIFFQRVWPQEHWNTANNEKG
Sbjct: 1081 TLSIFRQYIYLFSLFSFSHSSSDVSNKKSRGYCRCMSCFSIFFQRVWPQEHWNTANNEKG 1140
Query: 24 TQKESGC 4
TQKESGC
Sbjct: 1141 TQKESGC 1147
>gi|17536595|ref|NP_495426.1| membrane protein mediating cell
communication, sex-determining gene, promotes female
development family member, TRAnsformer : XX animals
transformed into males TRA-2 (170.4 kD) (tra-2)
[Caenorhabditis elegans]
gi|464914|sp|P34709|TRA2_CAEEL Sex-determining transformer protein 2
precursor
gi|477641|pir||A60026 cell communication-mediating membrane protein
pTra2A - Caenorhabditis elegans
gi|253437|gb|AAB22845.1| pTra2A [Caenorhabditis elegans]
gi|304341|gb|AAA28150.1| membrane protein
gi|7206595|gb|AAF39755.1| Transformer : xx animals transformed into
males protein 2, isoform a [Caenorhabditis elegans]
Length = 1475
Score = 2011 bits (5209), Expect = 0.0
Identities = 1011/1052 (96%), Positives = 1012/1052 (96%)
Frame = -1
Query: 3444 MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEKSIFPSFVSQGFFETRTNNEEYII 3265
MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEKSIFPSFVSQGFFETRTNNEEYII
Sbjct: 1 MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEKSIFPSFVSQGFFETRTNNEEYII 60
Query: 3264 EKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQSSS 3085
EKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQSSS
Sbjct: 61 EKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQSSS 120
Query: 3084 SDQNEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLRNSY 2905
SDQNEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLRNSY
Sbjct: 121 SDQNEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLRNSY 180
Query: 2904 IEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIEPRQ 2725
IEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIEPRQ
Sbjct: 181 IEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIEPRQ 240
Query: 2724 KTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNLDCVDDQEQ 2545
KTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNLDCVDDQEQ
Sbjct: 241 KTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNLDCVDDQEQ 300
Query: 2544 FIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQFD 2365
FIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQFD
Sbjct: 301 FIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSFSSTKSQFD 360
Query: 2364 TMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEETEKFKENRMS 2185
TMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEETEKFKENRMS
Sbjct: 361 TMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEETEKFKENRMS 420
Query: 2184 KMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSGAPLRSAFMFFVR 2005
KMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSGAPLRSAFMFFVR
Sbjct: 421 KMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSGAPLRSAFMFFVR 480
Query: 2004 DALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERLSRCIQREKRFP 1825
DALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERLSRCIQREKRFP
Sbjct: 481 DALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERLSRCIQREKRFP 540
Query: 1824 INSNFASLITVDTMTDSRQIQYFLSTVTKYQAAQDSYSNELFERFPKNWGCTSILIFPIV 1645
INSNFASLITVDTMTDSRQIQYFLSTVTKYQAAQDSYSNELFERFPKNWGCTSILIFPIV
Sbjct: 541 INSNFASLITVDTMTDSRQIQYFLSTVTKYQAAQDSYSNELFERFPKNWGCTSILIFPIV 600
Query: 1644 FVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQAKQRLENEEQAESITG 1465
FVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQAKQRLENEEQAESITG
Sbjct: 601 FVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQAKQRLENEEQAESITG 660
Query: 1464 SSLEKLFAGNKPVSNTDKANIVKKSSIIRNQKPCLQDLSPGTYDVSNFMKYPHQASRIFR 1285
SSLEKLFAGNKPVSNTDKANIVKKSSIIRNQKPCLQDLSPGTYDVSNFMKYPHQASRIFR
Sbjct: 661 SSLEKLFAGNKPVSNTDKANIVKKSSIIRNQKPCLQDLSPGTYDVSNFMKYPHQASRIFR 720
Query: 1284 EKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETLHTDSKQXXXXXXXXXF 1105
EKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETLHTDSKQ F
Sbjct: 721 EKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETLHTDSKQDDIFIEFEIF 780
Query: 1104 NFSTNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQETNKNASAEWNILFKWIND 925
NFSTNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQETNKNASAEWNILFKWIND
Sbjct: 781 NFSTNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQETNKNASAEWNILFKWIND 840
Query: 924 EPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEIVQKIDELLSKCSKNLSP 745
EPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEIVQKIDELLSKCSKNLSP
Sbjct: 841 EPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEIVQKIDELLSKCSKNLSP 900
Query: 744 KAVGVLYEHYHRIAVVWNLFAFNQLTXXXXXXXXXXXXXXXXXXXXXXXXXFLFSLLVVG 565
KAVGVLYEHYHRIAVVWNLFAFNQLT FLFSLLVVG
Sbjct: 901 KAVGVLYEHYHRIAVVWNLFAFNQLTTAGIFIILLSIITFIFAITPTIKATFLFSLLVVG 960
Query: 564 TQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRYRRRILYKSETRRTPELAS 385
TQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRYRRRILYKSETRRTPELAS
Sbjct: 961 TQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRYRRRILYKSETRRTPELAS 1020
Query: 384 KRRVLLPIVATADIAQFFVLLITEFPKREVTC 289
KRRVLLPIVATADIAQFFVLLIT F + C
Sbjct: 1021 KRRVLLPIVATADIAQFFVLLITAFSILAIIC 1052
>gi|2499021|sp|Q17307|TRA2_CAEBR SEX-DETERMINING TRANSFORMER PROTEIN 2
PRECURSOR
gi|7451531|pir||S72250 sex-determining transformer protein 2A -
Caenorhabditis briggsae
gi|1401285|gb|AAB49333.1| Cb-TRA-2A
Length = 1497
Score = 944 bits (2440), Expect = 0.0
Identities = 483/1061 (45%), Positives = 698/1061 (65%), Gaps = 18/1061 (1%)
Frame = -1
Query: 3444 MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEK--SIFPSFVSQGFFETRTNNEEY 3271
MKL +NKLLV+ V+ T ++FGLLLA F + + + P F + E++
Sbjct: 1 MKLAFNKLLVASVVFTVLSFGLLLASLFTTTATTPSEWTILLPEFRFP--VNKKQTMEQF 58
Query: 3270 IIEKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQS 3091
++EKI E G D+RS L+ T HGY +N I+N+K+ +RQK+YT+NDVCFKPH IF+
Sbjct: 59 LVEKIVHEHEEGEDVRSALYLTHHGYFMNAIANMKVTYRQKSYTVNDVCFKPHSAIFENV 118
Query: 3090 SSSDQ-NEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLR 2914
+ + ++ P Y QRLLLEMQRLSPCLIVTPLNCFYD Y IH EISNWN +TD+LNRRLR
Sbjct: 119 PAPENIDKLPAYFQRLLLEMQRLSPCLIVTPLNCFYDSYHIHSEISNWNASTDYLNRRLR 178
Query: 2913 NSYIEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIE 2734
NSY+EAI E D RPYVKS YGP LIK WA HMF +PSK +N +K L+ ++K WL SI
Sbjct: 179 NSYLEAIEEKDSRPYVKSTYGPELIKEWARHMFAIPSKPLSNFSKSDLYSRVKTWLSSIA 238
Query: 2733 PRQKTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEK---KTKFKLEDVDEEFAMNLDC 2563
R+K CA + SCD LD+E+YFN+CT MQ ++++ E+ + KF+LE DEEF LDC
Sbjct: 239 ARKKICADPMRSCDETLDAENYFNVCTVMQQINDYDERRKQRLKFQLEYGDEEFTTRLDC 298
Query: 2562 VDDQEQFIEWMQELEIR---KMYSHVTEKPDYPNVVNQTCDKIFHDLN-STGIEFFDGSR 2395
V+D+E+FIEWMQE +R K+++ E PD+ + NQ CD I+HDL+ S+G+E F G+R
Sbjct: 299 VEDREKFIEWMQERNLRDMLKLFASSVEIPDHKEIPNQVCDGIYHDLDTSSGLELFRGAR 358
Query: 2394 SFSSTKSQFDTMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEE 2215
SFS+ S +DT+ E+ +TPE LL+ M+HSDFVNGFESIWTIE+A EL++EFRLALK E
Sbjct: 359 SFSNNTSAYDTINVELGFMTPENLLTTMRHSDFVNGFESIWTIERARELLNEFRLALKVE 418
Query: 2214 TEKFKENRMSKMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSGAP 2035
KF E+R S+ ++VT+R+++ E I+F++ +L+V LF F +S A
Sbjct: 419 VTKFSESRSSRRVKVTTRIVNQIEEEGSDEEMEYHMIYFILGACALMVALFAAFAFSEAF 478
Query: 2034 LRSAFMFFVRDALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERLS 1855
L S MF +R +T LLF F+C + G+I++D+ + YI + NL T R +F R+
Sbjct: 479 LTSLSMFLLRGFITGLLFIFLCKSGGLILIDSNFLCYITMHLAFNLVMTARVTFICYRIG 538
Query: 1854 RCIQREKRFPINSNFASL--ITVDTMTD---SRQIQYFLSTVTKYQAAQDSYSNELFERF 1690
C+Q EK F + SNF+SL + VD++ + R +QY L+ TK+Q AQD+YS E FE+
Sbjct: 539 GCVQSEKDF-VKSNFSSLGSVPVDSLKEDSCKRHVQYVLAKYTKFQVAQDAYSEEPFEKL 597
Query: 1689 PKNWGCTSILIFPIVFVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQA 1510
PK W +I++ P++ VYW+FIDS+ KIC+ +LP+F +AA EE+ KN +ER +A
Sbjct: 598 PKYWFLIAIVLVPVIGVYWFFIDSDVQKICIVLLPAFLIAAFEEMRVKNQLLRERRIKKA 657
Query: 1509 KQRLENEEQAESITGSSLEKLFAGNKPVSNTDKANIVKKSSIIRN-QKPCLQDLSPGTYD 1333
QRL+ EE ++ ++ L +GN +S +K++ K ++ + L +LS TYD
Sbjct: 658 IQRLQKEENTRIMSRGEIDNLLSGNAELSG-EKSHYESKQGVLHHGSAGGLFELSRSTYD 716
Query: 1332 VSNFMKYPHQASRIFREKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETL 1153
VS M YP+Q R R +G Y R+ K++ V++ A LLI++SIGLLFIPV+R ++
Sbjct: 717 VSLIMAYPNQMIRNLRLCALGAYFRLFKMKYCAVVVSSVAALLILLSIGLLFIPVQRSSV 776
Query: 1152 HTDSKQXXXXXXXXXFNF-STNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQET 976
+ +Q N S++W+ +N+ L++F+ +I+SI L TI+NW+KSF+R+E+
Sbjct: 777 PKELQQDELSIDFAIPNVSSSSWESINEYLEEFNSEIDSITNLQTITNWKKSFDRYERRI 836
Query: 975 NKNASAEWNILFKWINDEPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEI 796
+N++++ N KW++DEPI+ +T + + NPF+F+ RYGFD+ ++T+I++
Sbjct: 837 YQNSTSKINNFLKWVDDEPISWYLTAPLTRPYRKTHLPNPFRFQFRYGFDSIQKSTIIDV 896
Query: 795 VQKIDELLSKCSKNLS-PKAVGVLYEHYHRIAVVWNLFAFNQLTXXXXXXXXXXXXXXXX 619
V++ID LL+K ++ LS PKA+G LYEHYH+ AVVWN FA++++
Sbjct: 897 VERIDTLLTKYTETLSFPKAIGFLYEHYHQKAVVWNSFAYHEIFAAAVLAGFFSIIVVFF 956
Query: 618 XXXXXXXXXFLFSLLVVGTQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRY 439
F+ VVG ++E+AA+V LFSL++HQ YTN+A+F GFLAAW PFC L R+
Sbjct: 957 SIGPVVLPTLAFAFFVVGNRLEIAAIVSLFSLEYHQCYTNVAVFVGFLAAWTPFCDLARF 1016
Query: 438 RRRILYKSETRRTPELASKRRVLLPIVATADIAQFFVLLIT 316
R R+LYK +TRRTPELA++RR+ +P VA D Q F + +T
Sbjct: 1017 RGRLLYKDQTRRTPELATQRRIRVPHVAAVDTVQIFAIFLT 1057
>gi|8037588|gb|AAF71402.1| TRA-2A [Caenorhabditis remanei]
Length = 1485
Score = 861 bits (2224), Expect = 0.0
Identities = 467/1060 (44%), Positives = 666/1060 (62%), Gaps = 18/1060 (1%)
Frame = -1
Query: 3444 MKLKYNKLLVSVVIVTFVTFGLLLAECFGK-----SIDYQEKSIFPSFVSQGFFETRTNN 3280
M L+ NKLLV+ VI T VTFGLLL S+ Y I P F Q E ++N
Sbjct: 1 MSLRSNKLLVAAVIFTVVTFGLLLTSSIFNNKTTTSLTYG--GILPKF-GQRIIEKKSN- 56
Query: 3279 EEYIIEKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIF 3100
EEYIIEKI TQ++G D+RST + T H YLL N++ +++K K +++ND+C+KPH IF
Sbjct: 57 EEYIIEKIEHTQKDGEDVRSTRYLTHHSYLLRNLAKMEVKHHGKDFSINDICYKPHNAIF 116
Query: 3099 QQSSSSDQ-NEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKN--TDFL 2929
+ + + + ++ P+Y+QRL+LE QRLSPCLIVTPLNC++D YRIH E+S WN + T+FL
Sbjct: 117 ETTFAPENIDKLPNYLQRLILEAQRLSPCLIVTPLNCYHDSYRIHSEMSKWNTSNVTNFL 176
Query: 2928 NRRLRNSYIEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLW 2749
NR+LRNSYI+AIGE++ERPY+KS YGP LIK WA MF LPSK ++ +K L KI+LW
Sbjct: 177 NRKLRNSYIDAIGESEERPYIKSTYGPDLIKEWAHLMFKLPSKQTSSFSKKDLSSKIELW 236
Query: 2748 LLSIEPRQKTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNL 2569
L SIE + ++ P + ++YF+ICT MQ V +F E+K KF L D D+EF + L
Sbjct: 237 LSSIESK-----TNLTELGRPSEVDNYFDICTSMQQVHDFDERKRKFGLYDDDDEFLIGL 291
Query: 2568 DCVDDQEQFIEWMQELEIRKMYSHVTEKPDYPNVVNQTCDKIFHDLNSTGIEFFDGSRSF 2389
DCV+++ +FIEW+QE E+R + KP PN Q CD IF NS G+EFF G+RSF
Sbjct: 292 DCVENKTKFIEWIQERELRGV-----SKPFNPN---QQCDGIFK--NSEGLEFFYGTRSF 341
Query: 2388 SSTKSQFDTMQTEIVLLTPEMLLSAMQHSDFVNGFESIWTIEKAEELIHEFRLALKEETE 2209
+ + FD M+TEI L+TPE +L+ M HSDFVNGFESIWTIE+A+EL+ +FRLA+++E +
Sbjct: 342 GNNTAPFDKMKTEIGLMTPEQILTTMLHSDFVNGFESIWTIERAQELLDDFRLAIRQEVK 401
Query: 2208 KFKENRMSKMIRVTSRVLDNTVTTKLQ---SFSEKQTIHFVVNVHSLIVILFTIFVWSGA 2038
+F ENR S I + +RV+ + + + S + ++F++ + +++I F F WS
Sbjct: 402 RFNENRSSLKIGIDTRVVQREESNETELEISSNLDSVVYFILFIRCVLLIFFAFFAWSVN 461
Query: 2037 PLRSAFMFFVRDALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTERL 1858
PLRSA MF VRDALT LLF +C +DG I L++EL+ YII+LT+ N Y TTR S+ +R
Sbjct: 462 PLRSAVMFLVRDALTSLLFSILCKSDGQIELNSELLGYIILLTIVNTYLTTRVSWYKDRN 521
Query: 1857 SRCIQREKRFPINSNFASLITVDTMT---DSRQIQYFLSTVTKYQAAQDSYSNELFERFP 1687
CIQR K FP SNF+ L ++D++ DSRQ+QY L+ ++KY A D+YS E F + P
Sbjct: 522 ETCIQRAKDFPSRSNFSLLFSIDSLRENCDSRQLQYALAKLSKYLTALDTYSTETFMQLP 581
Query: 1686 KNWGCTSILIFPIVFVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQAK 1507
W SIL PI YWYF+D N KI V +LPSF +A E+ + KER+A +
Sbjct: 582 NYWPFISILFVPITGCYWYFVDINLPKISVVLLPSFIVATIEQRQVEKSLLKERKAKKEF 641
Query: 1506 QRLENEEQAESITGSSLEKLFAGNKPVSNTDKANIVKKSSIIRNQKPCLQDLSPGTYDVS 1327
Q+++ ++ + ++ ++++L +GN K K I + L +LS +YDVS
Sbjct: 642 QKVQKKKMEKFLSDGAVDRLLSGNSESVEDKKLYKSKDCVIHKESAGRLYELSRSSYDVS 701
Query: 1326 NFMKYPHQASRIFREKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETLHT 1147
M YP+Q R FR +G Y ++KL++ G++L A+L +++S+ ++ IP++R +L
Sbjct: 702 KIMAYPNQRVRDFRFDALGCYFWLMKLKSAGILLYGSAVLFVLLSVAVMLIPIQRTSLQK 761
Query: 1146 DSKQXXXXXXXXXFNFSTNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQETNKN 967
D N S++W +N+NL F+ +I+SI +L TISNW+K F+RFE KN
Sbjct: 762 DMNN-EVYFGFSINNMSSDWANINKNLHAFNSEIDSIQSLQTISNWKKGFDRFEGRFYKN 820
Query: 966 AS--AEWNILFKWINDEPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDA-KNETTVIEI 796
+S ++ N +W+N EPIN +V + S I +PFKFR RY + NE+ VI+
Sbjct: 821 SSRISDANDYVEWMNQEPINWSVMAPLTRISPKFGIPSPFKFRFRYQIEVNNNESEVIDT 880
Query: 795 VQKIDELLSKCSKNL-SPKAVGVLYEHYHRIAVVWNLFAFNQLTXXXXXXXXXXXXXXXX 619
VQ+ID LL+K L SP GVLYE+YH A VWN F FN+L
Sbjct: 881 VQRIDTLLTKYKGTLSSPIVDGVLYEYYHGNAAVWNSFVFNELLASGILSAFFALIVVIF 940
Query: 618 XXXXXXXXXFLFSLLVVGTQIEVAALVHLFSLDHHQIYTNLALFAGFLAAWDPFCALLRY 439
+FS V+G+++E+AA++ LFSLD+ Q+YT+ A+ GFL AW PF L +
Sbjct: 941 SITPSISSVLIFSFFVIGSRLEIAAVISLFSLDNQQLYTDSAVLVGFLVAWAPFYELSLF 1000
Query: 438 RRRILYKSETRRTPELASKRRVLLPIVATADIAQFFVLLI 319
RRR+LYK +TR TPEL+S +R+ P D AQ F +++
Sbjct: 1001 RRRLLYKLKTRCTPELSSGKRIRPPFTKAVDTAQVFAIVL 1040
>gi|39590265|emb|CAE66003.1| Hypothetical protein CBG11194
[Caenorhabditis briggsae]
Length = 1349
Score = 753 bits (1945), Expect = 0.0
Identities = 410/935 (43%), Positives = 589/935 (62%), Gaps = 18/935 (1%)
Frame = -1
Query: 3444 MKLKYNKLLVSVVIVTFVTFGLLLAECFGKSIDYQEK--SIFPSFVSQGFFETRTNNEEY 3271
MKL +NKLLV+ V+ T ++FGLLLA F + + + P F + E++
Sbjct: 422 MKLAFNKLLVASVVFTVLSFGLLLASLFTTTATTPSEWTILLPEFRFP--VNKKQTTEQF 479
Query: 3270 IIEKIAQTQENGVDMRSTLHFTQHGYLLNNISNLKIKFRQKTYTLNDVCFKPHITIFQQS 3091
++EKI E G D+RS L+ T HGY +N I+N+K+ +RQK+YT+NDVCFKPH IF+
Sbjct: 480 LVEKIVHEHEEGEDVRSALYLTHHGYFMNAIANMKVTYRQKSYTVNDVCFKPHSAIFENV 539
Query: 3090 SSSDQ-NEYPHYIQRLLLEMQRLSPCLIVTPLNCFYDIYRIHGEISNWNKNTDFLNRRLR 2914
+ + ++ P Y QRLLLEMQRLSPCLIVTPLNCFYD Y IH EISNWN +TD+LNRRLR
Sbjct: 540 PAPENIDKLPAYFQRLLLEMQRLSPCLIVTPLNCFYDSYHIHSEISNWNASTDYLNRRLR 599
Query: 2913 NSYIEAIGENDERPYVKSNYGPSLIKSWADHMFDLPSKSFTNSTKDALFQKIKLWLLSIE 2734
NSY+EAI E D RPYVKS YGP LIK WA HMF +PSK +N +K L+ ++K WL SI
Sbjct: 600 NSYLEAIEEKDSRPYVKSTYGPELIKEWARHMFAIPSKPLSNFSKSDLYSRVKTWLSSIA 659
Query: 2733 PRQKTCAASIHSCDTPLDSEHYFNICTDMQSVDNFAEKKTKFKLEDVDEEFAMNLDCVDD 2554
R+K CA + SCD LD+E+YFN+CT MQ ++++ E++ +F+LE DEEF LDCV+D
Sbjct: 660 ARKKICADPMRSCDETLDAENYFNVCTVMQQINDYDERRKQFQLEYGDEEFTTRLDCVED 719
Query: 2553 QEQFIEWMQELEIR---KMYSHVTEKPDYPNVVNQTCDKIFHDLN-STGIEFFDGSRSFS 2386
+E+FIEWMQE +R K+++ E PD+ + NQ CD I+HDL+ S+G+E F G+RSFS
Sbjct: 720 REKFIEWMQERNLRDMLKLFASSVEIPDHKEIPNQVCDGIYHDLDTSSGLELFRGARSFS 779
Query: 2385 STKSQFDTMQTEIVLLTPEMLLSAM-----QHSDFVNGFESIWTIEKAEELIHEFRLALK 2221
+ S +DT+ E+ +TPE LL+ M +HSDFVNGFESIWTIE+A EL++EFRLALK
Sbjct: 780 NNTSAYDTINVELGFMTPENLLTTMVMSRDRHSDFVNGFESIWTIERARELLNEFRLALK 839
Query: 2220 EETEKFKENRMSKMIRVTSRVLDNTVTTKLQSFSEKQTIHFVVNVHSLIVILFTIFVWSG 2041
E KF E+R S+ ++VT+R+++ E I+F++ +L+V LF F +S
Sbjct: 840 VEVTKFSESRSSRRVKVTTRIVNQIEEEGSDEEMEYHMIYFILGACALMVALFAAFAFSE 899
Query: 2040 APLRSAFMFFVRDALTCLLFCFVCSTDGVIVLDTELIKYIIVLTLANLYFTTRSSFCTER 1861
A L S MF +R +T LLF F+C + G+I++D+ + YI + NL T R +F R
Sbjct: 900 AFLTSLSMFLLRGFITGLLFIFLCKSGGLILIDSNFLCYITMHLAFNLVMTARVTFICYR 959
Query: 1860 LSRCIQREKRFPINSNFASLITVDTMTD---SRQIQYFLSTVTKYQAAQDSYSNELFERF 1690
+ C+Q EK F + SNF+SL +VD++ + R +QY L+ TK+Q AQD+YS E FE+
Sbjct: 960 IGGCVQSEKDF-VKSNFSSLGSVDSLKEDSCKRHVQYVLAKYTKFQVAQDAYSEEPFEKL 1018
Query: 1689 PKNWGCTSILIFPIVFVYWYFIDSNFDKICVSVLPSFCLAAGEELFAKNMFWKEREAMQA 1510
PK W +I++ P++ VYW+FIDS+ KIC+ +LP+F +AA EE+ KN +ER +A
Sbjct: 1019 PKYWFLIAIVLVPVIGVYWFFIDSDVQKICIVLLPAFLIAAFEEMRVKNQLLRERRIKKA 1078
Query: 1509 KQRLENEEQAESITGSSLEKLFAGNKPVSNTDKANIVKKSSIIRN-QKPCLQDLSPGTYD 1333
QRL+ EE ++ ++ L +GN +S +K++ K ++ + L +LS TYD
Sbjct: 1079 IQRLQKEENTRIMSRGEIDNLLSGNAELSG-EKSHYESKQGVLHHGSAGGLFELSRSTYD 1137
Query: 1332 VSNFMKYPHQASRIFREKIIGLYLRILKLRTLGVILCIPAILLIVISIGLLFIPVKRETL 1153
VS M YP+Q R R +G Y R+ K++ V++ A LLI++SIGLLFIPV+R ++
Sbjct: 1138 VSLIMAYPNQMIRNLRLCALGAYFRLFKMKYCAVVVSSVAALLILLSIGLLFIPVQRSSV 1197
Query: 1152 HTDSKQXXXXXXXXXFNF-STNWKIVNQNLKQFSEDIESIGTLYTISNWQKSFERFEQET 976
+ +Q N S++W+ +N+ L++F+ +I+SI L TI+N ++
Sbjct: 1198 PKELQQDELSIDFAIPNVSSSSWESINEYLEEFNSEIDSITNLQTITNGRRVL-----IV 1252
Query: 975 NKNASAEWNILFKWINDEPINSAVTLFSEKSSGNQTIANPFKFRLRYGFDAKNETTVIEI 796
K+ + I P+ S TL S S + I+N +
Sbjct: 1253 TKDGFTSYRITSN--RSSPVPS--TLSSITSIPVRDISN----------------LSTDK 1292
Query: 795 VQKIDELLSKCSKNLS-PKAVGVLYEHYHRIAVVW 694
+ +ID LL+K ++ LS PKA+G LYEHYH+ AVVW
Sbjct: 1293 MLRIDTLLTKYTETLSFPKAIGFLYEHYHQKAVVW 1327