Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= C16C10_10
         (501 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17552218|ref|NP_497833.1| polypeptide 18kD (19.0 kD) (3F261) ...   343   1e-93
gi|39581894|emb|CAE72856.1| Hypothetical protein CBG20155 [Caeno...   231   4e-60
gi|45383520|ref|NP_989643.1| sin3-associated polypeptide, 18kDa ...   149   2e-35
gi|21410831|gb|AAH30836.1| Sin3 associated polypeptide p18 [Homo...   149   3e-35
gi|6677847|ref|NP_033145.1| Sin3-associated polypeptide 18 [Mus ...   149   3e-35
gi|5032067|ref|NP_005861.1| sin3 associated polypeptide p18 [Hom...   149   3e-35
gi|6648547|gb|AAF21220.1| 2HOR0202 [Homo sapiens]                     148   6e-35
gi|8977836|emb|CAB95728.1| SAP18 protein [Drosophila melanogaster]    147   7e-35
gi|17738001|ref|NP_524377.1| CG6046-PA [Drosophila melanogaster]...   147   7e-35
gi|17944943|gb|AAL48535.1| RE02417p [Drosophila melanogaster]         145   3e-34
gi|41152291|ref|NP_957014.1| hypothetical protein MGC73118 [Dani...   144   1e-33
gi|47216712|emb|CAG00986.1| unnamed protein product [Tetraodon n...   143   2e-33
gi|31205779|ref|XP_311841.1| ENSANGP00000017640 [Anopheles gambi...   137   1e-31
gi|33667908|gb|AAQ24533.1| P18 [Solanum chacoense]                    112   3e-24
gi|18406846|ref|NP_566050.1| sin3 associated polypeptide p18 fam...   103   1e-21
gi|21618189|gb|AAM67239.1| sin3 associated polypeptide p18 [Arab...   102   5e-21
gi|41052753|dbj|BAD07609.1| putative P18 [Oryza sativa (japonica...    99   3e-20
gi|23612496|ref|NP_704057.1| sin3 associated polypeptide p18-lik...    62   4e-09
gi|23488356|gb|EAA21288.1| KED, putative [Plasmodium yoelii yoelii]    61   9e-09
gi|49085266|ref|XP_404768.1| hypothetical protein AN0631.2 [Aspe...    56   3e-07
gi|46111305|ref|XP_382710.1| hypothetical protein FG02534.1 [Gib...    52   4e-06
gi|50255580|gb|EAL18313.1| hypothetical protein CNBJ2360 [Crypto...    46   3e-04
gi|38108949|gb|EAA54889.1| hypothetical protein MG05680.4 [Magna...    42   0.007
gi|47215364|emb|CAG02180.1| unnamed protein product [Tetraodon n...    33   2.0
gi|25027341|ref|NP_737395.1| conserved hypothetical protein [Cor...    32   7.5
gi|419481|pir||A46312 gag polyprotein - human endogenous virus S71     32   7.5
gi|46119794|ref|ZP_00177400.2| COG1134: ABC-type polysaccharide/...    31   9.9


>gi|17552218|ref|NP_497833.1| polypeptide 18kD (19.0 kD) (3F261)
           [Caenorhabditis elegans]
 gi|2496895|sp|Q09250|SP18_CAEEL PROBABLE SIN3 ASSOCIATED
           POLYPEPTIDE P18
 gi|7496094|pir||T19325 hypothetical protein C16C10.4 -
           Caenorhabditis elegans
 gi|3874382|emb|CAA86742.1| Hypothetical protein C16C10.4
           [Caenorhabditis elegans]
          Length = 166

 Score =  343 bits (879), Expect = 1e-93
 Identities = 166/166 (100%), Positives = 166/166 (100%)
 Frame = +1

Query: 1   MSNGQLVSQVTVGHDKPLDREKVCPMLLRVFVANNRHNPMSEYNSRNGGSVPPSELQMHT 180
           MSNGQLVSQVTVGHDKPLDREKVCPMLLRVFVANNRHNPMSEYNSRNGGSVPPSELQMHT
Sbjct: 1   MSNGQLVSQVTVGHDKPLDREKVCPMLLRVFVANNRHNPMSEYNSRNGGSVPPSELQMHT 60

Query: 181 WMDCSLRELTSLIKEVNPDARRKGTTFDFAIVQADRGSPRYILRDVGNTTNGERGIDDNK 360
           WMDCSLRELTSLIKEVNPDARRKGTTFDFAIVQADRGSPRYILRDVGNTTNGERGIDDNK
Sbjct: 61  WMDCSLRELTSLIKEVNPDARRKGTTFDFAIVQADRGSPRYILRDVGNTTNGERGIDDNK 120

Query: 361 TLQQCKFEVGDFVDVAISLPSQGRRFNNREQGDRFDHRQRQRSPIR 498
           TLQQCKFEVGDFVDVAISLPSQGRRFNNREQGDRFDHRQRQRSPIR
Sbjct: 121 TLQQCKFEVGDFVDVAISLPSQGRRFNNREQGDRFDHRQRQRSPIR 166




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