Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= C17H12_12
         (1047 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17538686|ref|NP_501048.1| putative secreted or extracellular ...   701   0.0
gi|25349870|pir||G88711 protein C17H12.8 [imported] - Caenorhabd...   566   e-160
gi|39593455|emb|CAE61747.1| Hypothetical protein CBG05701 [Caeno...   452   e-126
gi|17539724|ref|NP_502374.1| putative membrane protein family me...   392   e-108
gi|17538684|ref|NP_501049.1| putative secreted or extracellular ...   387   e-106
gi|39593457|emb|CAE61749.1| Hypothetical protein CBG05703 [Caeno...   160   5e-38
gi|17541024|ref|NP_501052.1| putative membrane protein family me...   158   2e-37
gi|17541028|ref|NP_501050.1| putative secreted or extracellular ...   143   7e-33
gi|17541026|ref|NP_501051.1| putative secreted or extracellular ...   122   1e-26
gi|39588546|emb|CAE58069.1| Hypothetical protein CBG01148 [Caeno...   122   1e-26
gi|39592802|emb|CAE62416.1| Hypothetical protein CBG06505 [Caeno...   119   2e-25
gi|39593456|emb|CAE61748.1| Hypothetical protein CBG05702 [Caeno...   117   6e-25
gi|39592801|emb|CAE62415.1| Hypothetical protein CBG06504 [Caeno...   114   4e-24
gi|29570455|gb|AAC68975.2| Hypothetical protein H20E11.3a [Caeno...   101   3e-20
gi|39581239|emb|CAE70436.1| Hypothetical protein CBG17013 [Caeno...    86   2e-15
gi|39588545|emb|CAE58068.1| Hypothetical protein CBG01147 [Caeno...    72   3e-11
gi|17557978|ref|NP_504488.1| putative membrane protein family me...    70   6e-11
gi|39593127|emb|CAE64596.1| Hypothetical protein CBG09351 [Caeno...    64   4e-09
gi|7495990|pir||T30130 hypothetical protein C14C11.4 - Caenorhab...    61   5e-08
gi|39592804|emb|CAE62418.1| Hypothetical protein CBG06507 [Caeno...    48   3e-04
gi|17560552|ref|NP_506397.1| predicted CDS, putative cytoplasmic...    47   6e-04
gi|39590515|emb|CAE66255.1| Hypothetical protein CBG11499 [Caeno...    45   0.003
gi|39590513|emb|CAE66253.1| Hypothetical protein CBG11497 [Caeno...    45   0.004
gi|39590511|emb|CAE66251.1| Hypothetical protein CBG11495 [Caeno...    44   0.005
gi|32567011|ref|NP_872187.1| putative membrane protein family me...    44   0.006
gi|17560556|ref|NP_506400.1| putative membrane protein family me...    44   0.008
gi|34555954|emb|CAB04274.2| Hypothetical protein F35E12.4 [Caeno...    40   0.068
gi|17560568|ref|NP_506404.1| putative protein family member (5O2...    39   0.15
gi|17560560|ref|NP_506401.1| putative secreted or extracellular ...    38   0.34
gi|34555955|emb|CAB04273.2| Hypothetical protein F35E12.6 [Caeno...    38   0.34
gi|17560558|ref|NP_506402.1| predicted CDS, putative protein fam...    38   0.44
gi|17560562|ref|NP_506399.1| putative protein family member, wit...    37   0.58
gi|7507201|pir||T24531 hypothetical protein T05E12.6 - Caenorhab...    37   0.98
gi|32566971|ref|NP_507327.2| putative protein family member, wit...    37   0.98
gi|18148876|dbj|BAB83467.1| Vp260 like protein [Chlorella virus]       36   1.3
gi|14794905|gb|AAK73513.1| AmphB [Streptomyces nodosus]                36   1.7
gi|13358044|ref|NP_078318.1| unique hypothetical [Ureaplasma par...    36   1.7
gi|15678358|ref|NP_275473.1| conserved protein [Methanothermobac...    35   2.9
gi|16273668|ref|NP_439873.1| Hsf-like protein [Haemophilus influ...    34   6.4
gi|17540684|ref|NP_502484.1| putative protein family member (4N7...    34   6.4
gi|47213886|emb|CAF93568.1| unnamed protein product [Tetraodon n...    33   8.3
gi|39596502|emb|CAE63121.1| Hypothetical protein CBG07418 [Caeno...    33   8.3


>gi|17538686|ref|NP_501048.1| putative secreted or extracellular
            protein family member precursor (39.2 kD) (4H583)
            [Caenorhabditis elegans]
 gi|4966266|gb|AAD34648.1| Hypothetical protein C17H12.8
            [Caenorhabditis elegans]
          Length = 348

 Score =  701 bits (1810), Expect = 0.0
 Identities = 348/348 (100%), Positives = 348/348 (100%)
 Frame = +1

Query: 1    MIVAFWLLALVTVSTALECTQIPEPIIAGEFVTIPAGANDTVQIPPNFSCTYNVNAPPMI 180
            MIVAFWLLALVTVSTALECTQIPEPIIAGEFVTIPAGANDTVQIPPNFSCTYNVNAPPMI
Sbjct: 1    MIVAFWLLALVTVSTALECTQIPEPIIAGEFVTIPAGANDTVQIPPNFSCTYNVNAPPMI 60

Query: 181  YAHVTLENGLNGNNDMITVIDEQLTRTIVSSRSAKFVHFYIFPNTTTKFQVITKSVNMHS 360
            YAHVTLENGLNGNNDMITVIDEQLTRTIVSSRSAKFVHFYIFPNTTTKFQVITKSVNMHS
Sbjct: 61   YAHVTLENGLNGNNDMITVIDEQLTRTIVSSRSAKFVHFYIFPNTTTKFQVITKSVNMHS 120

Query: 361  SFRIVVHFERMLNTTVTHLGNPDMKYFMLNDLRVNSYRTPQTMISNERISLSIAHSGWYS 540
            SFRIVVHFERMLNTTVTHLGNPDMKYFMLNDLRVNSYRTPQTMISNERISLSIAHSGWYS
Sbjct: 121  SFRIVVHFERMLNTTVTHLGNPDMKYFMLNDLRVNSYRTPQTMISNERISLSIAHSGWYS 180

Query: 541  DIFDNYFVIEGYIENPKAVYRMSKFVYQGYISTGNILTVVGLDNRVSESSVTFVPLSQAQ 720
            DIFDNYFVIEGYIENPKAVYRMSKFVYQGYISTGNILTVVGLDNRVSESSVTFVPLSQAQ
Sbjct: 181  DIFDNYFVIEGYIENPKAVYRMSKFVYQGYISTGNILTVVGLDNRVSESSVTFVPLSQAQ 240

Query: 721  QYDSYTAFSTYFQANQLDMDSTVGDKKKKAVTVISMEDIVLVIDVQKTNEPNCVLRAVQY 900
            QYDSYTAFSTYFQANQLDMDSTVGDKKKKAVTVISMEDIVLVIDVQKTNEPNCVLRAVQY
Sbjct: 241  QYDSYTAFSTYFQANQLDMDSTVGDKKKKAVTVISMEDIVLVIDVQKTNEPNCVLRAVQY 300

Query: 901  PPTPSSEVYLDFTAVYDYPRNITHKSFCIVAENCAATFKLVSPYPEQN 1044
            PPTPSSEVYLDFTAVYDYPRNITHKSFCIVAENCAATFKLVSPYPEQN
Sbjct: 301  PPTPSSEVYLDFTAVYDYPRNITHKSFCIVAENCAATFKLVSPYPEQN 348




[DB home][top]