Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C25F9_4
(2124 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17558242|ref|NP_507777.1| SNF2 related domain containing prot... 1425 0.0
gi|32566893|ref|NP_872172.1| SNF2 related domain containing prot... 753 0.0
gi|17562670|ref|NP_507782.1| SNF2 related domain containing prot... 746 0.0
gi|17565672|ref|NP_507785.1| putative protein family member, wit... 293 1e-77
gi|31043673|emb|CAB03922.3| Hypothetical protein C25F9.4 [Caenor... 284 7e-75
gi|32566826|ref|NP_507778.2| putative nuclear protein family mem... 279 2e-73
gi|32566824|ref|NP_507784.2| putative nuclear protein family mem... 276 1e-72
gi|7505994|pir||T23701 hypothetical protein M04C3.2 - Caenorhabd... 197 1e-48
gi|7496498|pir||T19463 hypothetical protein C25F9.4 - Caenorhabd... 193 1e-47
gi|17565670|ref|NP_507786.1| putative protein family member (5T9... 111 6e-23
gi|17565668|ref|NP_507787.1| putative nuclear protein family mem... 107 1e-21
gi|17559866|ref|NP_507886.1| putative protein family member of a... 80 2e-13
gi|17558250|ref|NP_507779.1| putative cytoplasmic protein family... 72 7e-11
gi|50427483|ref|XP_462354.1| unnamed protein product [Debaryomyc... 69 5e-10
gi|17566484|ref|NP_507903.1| SNF2 related domain containing prot... 66 4e-09
gi|46127691|ref|XP_388399.1| hypothetical protein FG08223.1 [Gib... 64 1e-08
gi|22326612|ref|NP_196132.2| SNF2 domain-containing protein / he... 63 2e-08
gi|10178052|dbj|BAB11535.1| helicase-like transcription factor-l... 63 2e-08
gi|32408661|ref|XP_324811.1| hypothetical protein [Neurospora cr... 63 3e-08
gi|32407090|ref|XP_324143.1| hypothetical protein [Neurospora cr... 60 2e-07
gi|25465825|pir||T51892 hypothetical protein B23I11.40 [imported... 60 2e-07
gi|7510991|pir||T27753 hypothetical protein ZK1320.7 - Caenorhab... 59 4e-07
gi|25154011|ref|NP_741037.1| putative cytoplasmic protein family... 59 4e-07
gi|19113394|ref|NP_596602.1| SNF2 family dna repair protein by s... 59 6e-07
gi|39595329|emb|CAE60366.1| Hypothetical protein CBG03965 [Caeno... 58 8e-07
gi|34904734|ref|NP_913714.1| helicase-like transcription factor-... 58 1e-06
gi|17540630|ref|NP_502137.1| SNF2 related domain and helicase, C... 57 1e-06
gi|32408243|ref|XP_324603.1| hypothetical protein [Neurospora cr... 57 2e-06
gi|34855513|ref|XP_215728.2| similar to transcription factor [Ra... 57 2e-06
gi|48097325|ref|XP_393754.1| similar to CG2684-PA [Apis mellifera] 57 2e-06
gi|46138107|ref|XP_390744.1| hypothetical protein FG10568.1 [Gib... 57 2e-06
gi|15239896|ref|NP_199166.1| SNF2 domain-containing protein / he... 57 2e-06
gi|38101894|gb|EAA48795.1| hypothetical protein MG00453.4 [Magna... 56 3e-06
gi|49109447|ref|XP_411675.1| hypothetical protein AN7538.2 [Aspe... 56 3e-06
gi|38106692|gb|EAA52966.1| hypothetical protein MG06094.4 [Magna... 56 4e-06
gi|19704495|ref|NP_604057.1| SWF/SNF family helicase [Fusobacter... 56 4e-06
gi|38111185|gb|EAA56800.1| hypothetical protein MG07155.4 [Magna... 55 7e-06
gi|46443104|gb|EAL02388.1| hypothetical protein CaO19.10486 [Can... 55 9e-06
gi|31240303|ref|XP_320565.1| ENSANGP00000008692 [Anopheles gambi... 55 9e-06
gi|47221989|emb|CAG08244.1| unnamed protein product [Tetraodon n... 53 3e-05
gi|46128445|ref|XP_388776.1| hypothetical protein FG08600.1 [Gib... 53 3e-05
gi|47211476|emb|CAG13358.1| unnamed protein product [Tetraodon n... 53 3e-05
gi|19115158|ref|NP_594246.1| helicase; putative DNA repair prote... 52 4e-05
gi|42409514|ref|NP_659208.1| SWI/SNF related, matrix associated,... 52 6e-05
gi|25402644|pir||A86245 hypothetical protein [imported] - Arabid... 52 6e-05
gi|42561912|ref|NP_172577.2| SNF2 domain-containing protein / he... 52 6e-05
gi|7106417|ref|NP_033236.1| SWI/SNF related, matrix associated, ... 52 6e-05
gi|34785644|gb|AAH57116.1| SWI/SNF related, matrix associated, a... 52 6e-05
gi|38086734|ref|XP_125439.2| similar to SWI/SNF related, matrix ... 52 7e-05
gi|27882409|gb|AAH44659.1| SMARCA3 protein [Homo sapiens] 51 1e-04
gi|38346175|emb|CAE04093.2| OSJNBa0096F01.2 [Oryza sativa (japon... 51 1e-04
gi|1658307|emb|CAA86572.1| helicase-like transcription factor [H... 51 1e-04
gi|531196|gb|AAA67436.1| ATPase 51 1e-04
gi|16943790|emb|CAD10805.1| SWI/SNF related, matrix associated, ... 51 1e-04
gi|21071052|ref|NP_003062.2| SWI/SNF-related matrix-associated a... 51 1e-04
gi|1082438|pir||S49618 helicase-like transcription factor - huma... 51 1e-04
gi|46128325|ref|XP_388716.1| hypothetical protein FG08540.1 [Gib... 51 1e-04
gi|1655930|gb|AAC18656.1| RUSH-1alpha [Oryctolagus cuniculus] 51 1e-04
gi|48855575|ref|ZP_00309734.1| COG0553: Superfamily II DNA/RNA h... 51 1e-04
gi|1655932|gb|AAC48693.1| RUSH-1beta [Oryctolagus cuniculus] 51 1e-04
gi|46227356|gb|EAK88291.1| CHD3 ortholog with 2x chromodomains p... 50 2e-04
gi|85049|pir||A40580 lodestar maternal-effect protein - fruit fl... 50 2e-04
gi|21392184|gb|AAM48446.1| RE70645p [Drosophila melanogaster] 50 2e-04
gi|24644932|ref|NP_524850.2| CG2684-PA [Drosophila melanogaster]... 50 2e-04
gi|15242960|ref|NP_197667.1| SNF2 domain-containing protein / he... 50 3e-04
gi|46123559|ref|XP_386333.1| hypothetical protein FG06157.1 [Gib... 50 3e-04
gi|49388292|dbj|BAD25407.1| putative DNA repair protein rad8 [Or... 49 4e-04
gi|37542688|gb|AAL47203.1| chromatin-remodeling factor CHD3 [Ory... 49 5e-04
gi|32564642|ref|NP_871873.1| RNA polymerase II termination facto... 49 5e-04
gi|37542684|gb|AAL47211.1| chromatin-remodeling factor CHD3 [Ory... 49 5e-04
gi|7508346|pir||T28968 hypothetical protein T23H2.3 - Caenorhabd... 49 5e-04
gi|25141376|ref|NP_491854.2| SNF2 related domain and helicase, C... 49 5e-04
gi|9630851|ref|NP_047448.1| GTA=Global Transactivator=AcMNPV orf... 49 5e-04
gi|15898471|ref|NP_343076.1| Helicase of the snf2/rad54 family (... 49 5e-04
gi|47122916|gb|AAH70581.1| MGC81081 protein [Xenopus laevis] 49 6e-04
gi|49068248|ref|XP_398413.1| hypothetical protein UM00798.1 [Ust... 48 8e-04
gi|9627784|ref|NP_054071.1| global transactivator-like protein [... 48 8e-04
gi|50729638|ref|XP_416595.1| PREDICTED: similar to transcription... 48 0.001
gi|25020799|ref|XP_207781.1| similar to RNA polymerase II termin... 47 0.001
gi|20875035|ref|XP_131118.1| transcription termination factor, R... 47 0.001
gi|24644930|ref|NP_649751.1| CG10445-PA [Drosophila melanogaster... 47 0.002
gi|50288685|ref|XP_446772.1| unnamed protein product [Candida gl... 47 0.002
gi|32404678|ref|XP_322952.1| hypothetical protein ( (AL451013) p... 46 0.003
gi|49089344|ref|XP_406393.1| hypothetical protein AN2256.2 [Aspe... 46 0.003
gi|18310607|ref|NP_562541.1| SWI/SNF family helicase [Clostridiu... 46 0.003
gi|38109494|gb|EAA55357.1| hypothetical protein MG07014.4 [Magna... 46 0.003
gi|23577840|ref|NP_703032.1| global transactivator [Rachiplusia ... 46 0.004
gi|46446009|ref|YP_007374.1| putative rapA, a bacterial member o... 46 0.004
gi|46136625|ref|XP_390004.1| hypothetical protein FG09828.1 [Gib... 45 0.005
gi|50552109|ref|XP_503529.1| hypothetical protein [Yarrowia lipo... 45 0.005
gi|45935136|gb|AAS79594.1| putative DNA repair protein [Ipomoea ... 45 0.009
gi|40882196|emb|CAF06022.1| related to regulator of chromatin [N... 45 0.009
gi|37651342|ref|NP_932651.1| global transactivator-like protein ... 45 0.009
gi|23509180|ref|NP_701848.1| DNA repair protein rhp16, putative ... 44 0.012
gi|39584767|emb|CAE67662.1| Hypothetical protein CBG13225 [Caeno... 44 0.012
gi|46137913|ref|XP_390647.1| hypothetical protein FG10471.1 [Gib... 44 0.012
gi|23490775|gb|EAA22469.1| DNA repair protein-like-related [Plas... 44 0.012
gi|23124140|ref|ZP_00106150.1| COG0553: Superfamily II DNA/RNA h... 44 0.012
gi|34859664|ref|XP_215670.2| similar to RNA polymerase II termin... 44 0.016
gi|23099360|ref|NP_692826.1| helicase [Oceanobacillus iheyensis ... 44 0.016
gi|49097798|ref|XP_410359.1| hypothetical protein AN6222.2 [Aspe... 44 0.016
gi|40807471|ref|NP_003585.3| transcription termination factor, R... 44 0.020
gi|5733122|gb|AAD49435.1| lodestar protein [Homo sapiens] 44 0.020
gi|19111970|ref|NP_595178.1| rad16 nucleotide excision repair pr... 44 0.020
gi|11994614|dbj|BAB02751.1| unnamed protein product [Arabidopsis... 44 0.020
gi|50258841|gb|EAL21526.1| hypothetical protein CNBD2200 [Crypto... 44 0.020
gi|46123053|ref|XP_386080.1| hypothetical protein FG05904.1 [Gib... 44 0.020
gi|15228256|ref|NP_188282.1| SNF2 domain-containing protein / he... 44 0.020
gi|15320696|ref|NP_203208.1| GTA [Epiphyas postvittana nucleopol... 43 0.027
gi|50420537|ref|XP_458805.1| unnamed protein product [Debaryomyc... 43 0.027
gi|30387275|ref|NP_848354.1| global transactivator [Choristoneur... 43 0.027
gi|32406370|ref|XP_323798.1| hypothetical protein [Neurospora cr... 43 0.027
gi|45187527|ref|NP_983750.1| ADL345Cp [Eremothecium gossypii] >g... 43 0.027
gi|40882176|emb|CAF06002.1| related to protein RIS1 [Neurospora ... 43 0.027
gi|15079181|ref|NP_149635.1| 172L [Invertebrate iridescent virus... 43 0.035
gi|861466|gb|AAB33905.1| DNA helicase homolog [Chilo iridescent ... 43 0.035
gi|23619365|ref|NP_705327.1| DNA helicase, putative [Plasmodium ... 42 0.045
gi|3702846|gb|AAC64044.1| RNA polymerase II termination factor [... 42 0.059
gi|46137317|ref|XP_390350.1| hypothetical protein FG10174.1 [Gib... 42 0.059
gi|32416406|ref|XP_328681.1| hypothetical protein [Neurospora cr... 42 0.059
gi|19704721|ref|NP_604283.1| SWF/SNF family helicase [Fusobacter... 42 0.059
gi|49096320|ref|XP_409620.1| hypothetical protein AN5483.2 [Aspe... 42 0.059
gi|6319590|ref|NP_009672.1| Protein that recognizes and binds da... 42 0.077
gi|50259922|gb|EAL22590.1| hypothetical protein CNBB4670 [Crypto... 42 0.077
gi|23485659|gb|EAA20522.1| SNF2 family N-terminal domain, putati... 42 0.077
gi|46434839|gb|EAK94239.1| hypothetical protein CaO19.5675 [Cand... 41 0.10
gi|17233188|ref|NP_490278.1| putative helicase [Nostoc sp. PCC 7... 41 0.10
gi|23485366|gb|EAA20388.1| Arabidopsis thaliana BRAHMA ortholog-... 41 0.13
gi|7489884|pir||T08605 hypothetical protein HelE - slime mold (D... 41 0.13
gi|42561667|ref|NP_171871.2| helicase, putative [Arabidopsis tha... 40 0.17
gi|46121223|ref|XP_385166.1| hypothetical protein FG04990.1 [Gib... 40 0.17
gi|23484817|gb|EAA20018.1| hypothetical protein [Plasmodium yoel... 40 0.17
gi|13357730|ref|NP_078004.1| MBA N-terminal paralog [Ureaplasma ... 40 0.17
gi|25406739|pir||H86167 hypothetical protein [imported] - Arabid... 40 0.17
gi|50424047|ref|XP_460608.1| unnamed protein product [Debaryomyc... 40 0.17
gi|50257983|gb|EAL20677.1| hypothetical protein CNBE0430 [Crypto... 40 0.22
gi|26988870|ref|NP_744295.1| helicase, SNF2/RAD54 family [Pseudo... 40 0.22
gi|34763541|ref|ZP_00144479.1| SWF/SNF family helicase [Fusobact... 40 0.22
gi|50257984|gb|EAL20678.1| hypothetical protein CNBE0430 [Crypto... 40 0.22
gi|38102212|gb|EAA49078.1| hypothetical protein MG00736.4 [Magna... 39 0.38
gi|38099998|gb|EAA47222.1| hypothetical protein MG11047.4 [Magna... 39 0.38
gi|50303981|ref|XP_451940.1| unnamed protein product [Kluyveromy... 39 0.50
gi|15806278|ref|NP_294983.1| DNA helicase, SNF2/RAD54 family [De... 39 0.50
gi|23481248|gb|EAA17582.1| similar nucleotide excision repair pr... 39 0.50
gi|32419258|ref|XP_330101.1| hypothetical protein [Neurospora cr... 39 0.50
gi|46805057|dbj|BAD17038.1| putative SNF2 domain-containing prot... 39 0.65
gi|49073298|ref|XP_400878.1| hypothetical protein UM03263.1 [Ust... 39 0.65
gi|9629985|ref|NP_046203.1| global transactivator [Orgyia pseudo... 39 0.65
gi|23474884|ref|ZP_00130175.1| COG0553: Superfamily II DNA/RNA h... 39 0.65
gi|28631398|gb|AAO49696.1| similar to Plasmodium falciparum (iso... 38 0.85
gi|48111472|ref|XP_396302.1| similar to ENSANGP00000014757 [Apis... 38 0.85
gi|32491021|ref|NP_871275.1| uvrD [Wigglesworthia glossinidia en... 38 0.85
gi|17229968|ref|NP_486516.1| unknown protein [Nostoc sp. PCC 712... 38 0.85
gi|15645153|ref|NP_207323.1| cag pathogenicity island protein (c... 38 0.85
gi|50254799|gb|EAL17544.1| hypothetical protein CNBM1100 [Crypto... 38 0.85
gi|23478629|gb|EAA15664.1| hypothetical protein [Plasmodium yoel... 38 0.85
gi|15595996|ref|NP_249490.1| probable helicase [Pseudomonas aeru... 38 1.1
gi|50292251|ref|XP_448558.1| unnamed protein product [Candida gl... 37 1.5
gi|23508035|ref|NP_700705.1| hypothetical protein [Plasmodium fa... 37 1.5
gi|15231009|ref|NP_188635.1| SNF2 domain-containing protein / he... 37 1.5
gi|23489816|gb|EAA21734.1| chromodomain-helicase-DNA-binding pro... 37 1.9
gi|23613241|ref|NP_703563.1| hypothetical protein [Plasmodium fa... 37 1.9
gi|39546244|emb|CAE04253.3| OSJNBa0089N06.14 [Oryza sativa (japo... 37 1.9
gi|23485550|gb|EAA20470.1| DOMINO B-related [Plasmodium yoelii y... 37 1.9
gi|46126713|ref|XP_387910.1| hypothetical protein FG07734.1 [Gib... 37 1.9
gi|15625568|gb|AAL04164.1| Run- and FYVE-domain containing prote... 37 2.5
gi|6474545|dbj|BAA87269.1| Hypothetical nuclear protein [Schizos... 37 2.5
gi|7959341|dbj|BAA96061.1| KIAA1537 protein [Homo sapiens] 37 2.5
gi|24850107|ref|NP_060457.2| RUN and FYVE domain-containing 2; R... 37 2.5
gi|7533190|gb|AAF63384.1| kinesin Unc104/KIF1a homolog [Dictyost... 37 2.5
gi|50557268|ref|XP_506042.1| hypothetical protein [Yarrowia lipo... 37 2.5
gi|42523166|ref|NP_968546.1| putative helicase/SNF2 family domai... 37 2.5
gi|32406328|ref|XP_323777.1| hypothetical protein [Neurospora cr... 37 2.5
gi|50284977|ref|XP_444917.1| unnamed protein product [Candida gl... 36 3.2
gi|32414725|ref|XP_327842.1| hypothetical protein [Neurospora cr... 36 3.2
gi|5734771|gb|AAD50036.1| Similar to transcription factors [Arab... 36 3.2
gi|49067793|ref|XP_398186.1| hypothetical protein UM00571.1 [Ust... 36 3.2
gi|25405372|pir||D96540 hypothetical protein F11F12.23 [imported... 36 3.2
gi|18403061|ref|NP_564568.1| SNF2 domain-containing protein / he... 36 3.2
gi|23126141|ref|ZP_00108047.1| COG0553: Superfamily II DNA/RNA h... 36 3.2
gi|12831221|ref|NP_075589.1| vesicle transport through interacti... 36 4.2
gi|13928668|ref|NP_058558.1| vesicle transport through interacti... 36 4.2
gi|46227317|gb|EAK88267.1| predicted coiled coil protein [Crypto... 36 4.2
gi|46226722|gb|EAK87701.1| Swi2/Snf2 ATpase,Rad16 ortholog [Cryp... 36 4.2
gi|48825416|ref|ZP_00286666.1| hypothetical protein Efae03001297... 36 4.2
gi|50255001|gb|EAL17741.1| hypothetical protein CNBL2540 [Crypto... 36 4.2
gi|46104617|ref|ZP_00191573.2| COG0553: Superfamily II DNA/RNA h... 36 4.2
gi|41725682|ref|ZP_00152440.1| COG0553: Superfamily II DNA/RNA h... 36 4.2
gi|50509490|dbj|BAD31171.1| putative DNA repair protein rhp16 [O... 36 4.2
gi|19074937|ref|NP_586443.1| NOT1-LIKE GENERAL NEGATIVE REGULATO... 36 4.2
gi|46091615|dbj|BAD14052.1| cag pathogenicity island protein [He... 36 4.2
gi|23128497|ref|ZP_00110342.1| COG0553: Superfamily II DNA/RNA h... 36 4.2
gi|21624648|ref|NP_660207.1| SNARE Vti1a-beta protein [Homo sapi... 36 4.2
gi|30349163|gb|AAP22024.1| CagY [Helicobacter pylori] 35 5.5
gi|23612816|ref|NP_704355.1| ATP-dependant helicase, putative [P... 35 5.5
gi|6324765|ref|NP_014834.1| contains motifs that are present in ... 35 5.5
gi|23490331|gb|EAA22135.1| hypothetical protein [Plasmodium yoel... 35 5.5
gi|23509934|ref|NP_702601.1| hypothetical protein [Plasmodium fa... 35 5.5
gi|46091588|dbj|BAD14026.1| cag pathogenicity island protein [He... 35 5.5
gi|23481134|gb|EAA17503.1| hypothetical protein [Plasmodium yoel... 35 7.2
gi|20514774|ref|NP_620610.1| putative cell surface antigen [Ratt... 35 7.2
gi|50751976|ref|XP_422597.1| PREDICTED: similar to RIKEN cDNA C3... 35 7.2
gi|17227770|ref|NP_484318.1| hypothetical protein [Nostoc sp. PC... 35 7.2
gi|16805045|ref|NP_473074.1| DNA helicase, putative [Plasmodium ... 35 7.2
gi|19075201|ref|NP_587701.1| RAD16 nucleotide excision repair pr... 35 9.4
gi|50746413|ref|XP_420485.1| PREDICTED: similar to hypothetical ... 35 9.4
gi|14195095|sp|P79051|RH16_SCHPO DNA repair protein rhp16 (RAD16... 35 9.4
gi|31234796|ref|XP_319118.1| ENSANGP00000022335 [Anopheles gambi... 35 9.4
gi|15289872|dbj|BAB63568.1| putative helicase-like transcription... 35 9.4
gi|38099352|gb|EAA46709.1| hypothetical protein MG09930.4 [Magna... 35 9.4
gi|25462850|pir||T52472 RAD16 nucleotide excision repair protein... 35 9.4
gi|5830552|emb|CAB54808.1| SPCC330.01c [Schizosaccharomyces pombe] 35 9.4
gi|23507981|ref|NP_700651.1| erythrocyte membrane-associated ant... 35 9.4
>gi|17558242|ref|NP_507777.1| SNF2 related domain containing protein
family member (5T882) [Caenorhabditis elegans]
gi|7496499|pir||T19464 hypothetical protein C25F9.5 - Caenorhabditis
elegans
gi|3874471|emb|CAB03923.1| Hypothetical protein C25F9.5
[Caenorhabditis elegans]
Length = 707
Score = 1425 bits (3689), Expect = 0.0
Identities = 707/707 (100%), Positives = 707/707 (100%)
Frame = -1
Query: 2124 MKNVMQDLKKLENRKDSGGIITVPTSDSEIDQVIISYILEQKEQGTSENNINLIVGTPKW 1945
MKNVMQDLKKLENRKDSGGIITVPTSDSEIDQVIISYILEQKEQGTSENNINLIVGTPKW
Sbjct: 1 MKNVMQDLKKLENRKDSGGIITVPTSDSEIDQVIISYILEQKEQGTSENNINLIVGTPKW 60
Query: 1944 IKSWNLKFNGFIRAGILKDDDLLISYFYNRTKSRSSNELAKNDIVITTYDTLKTKSNLPI 1765
IKSWNLKFNGFIRAGILKDDDLLISYFYNRTKSRSSNELAKNDIVITTYDTLKTKSNLPI
Sbjct: 61 IKSWNLKFNGFIRAGILKDDDLLISYFYNRTKSRSSNELAKNDIVITTYDTLKTKSNLPI 120
Query: 1764 FKAVDWERIILYEANKISDINTLRFGAICELKSKYRWCLTENFKQHSLAFFLKMYDVDSF 1585
FKAVDWERIILYEANKISDINTLRFGAICELKSKYRWCLTENFKQHSLAFFLKMYDVDSF
Sbjct: 121 FKAVDWERIILYEANKISDINTLRFGAICELKSKYRWCLTENFKQHSLAFFLKMYDVDSF 180
Query: 1584 KNTKSLEEHKLLVKDIEKDLEQVNLYWSSTELKMKRINFVLKPRQKEFTNSLAQCEAEST 1405
KNTKSLEEHKLLVKDIEKDLEQVNLYWSSTELKMKRINFVLKPRQKEFTNSLAQCEAEST
Sbjct: 181 KNTKSLEEHKLLVKDIEKDLEQVNLYWSSTELKMKRINFVLKPRQKEFTNSLAQCEAEST 240
Query: 1404 YRTTAYGMNEDEIRKSIIAFLLDQDEKSERSSRAMGKTLLVMSPDVIKPWKELLESLLKE 1225
YRTTAYGMNEDEIRKSIIAFLLDQDEKSERSSRAMGKTLLVMSPDVIKPWKELLESLLKE
Sbjct: 241 YRTTAYGMNEDEIRKSIIAFLLDQDEKSERSSRAMGKTLLVMSPDVIKPWKELLESLLKE 300
Query: 1224 DYLAINYYGNETKKSNNSHVVVITTYDRFEKSYKKYIQWERIIFYGFSLANAKCNQHYQK 1045
DYLAINYYGNETKKSNNSHVVVITTYDRFEKSYKKYIQWERIIFYGFSLANAKCNQHYQK
Sbjct: 301 DYLAINYYGNETKKSNNSHVVVITTYDRFEKSYKKYIQWERIIFYGFSLANAKCNQHYQK 360
Query: 1044 LLQLSVMHRWCLTEENTHRFSAHFLKGNNDKIGEDVVVNNIEQKLHLLSTTKYYFTLMTS 865
LLQLSVMHRWCLTEENTHRFSAHFLKGNNDKIGEDVVVNNIEQKLHLLSTTKYYFTLMTS
Sbjct: 361 LLQLSVMHRWCLTEENTHRFSAHFLKGNNDKIGEDVVVNNIEQKLHLLSTTKYYFTLMTS 420
Query: 864 AIKASKANDCCQFSNDMWESIVSYTKEFFYKNFEIWLKEDESLEEMYEMMCLGLDGSAAA 685
AIKASKANDCCQFSNDMWESIVSYTKEFFYKNFEIWLKEDESLEEMYEMMCLGLDGSAAA
Sbjct: 421 AIKASKANDCCQFSNDMWESIVSYTKEFFYKNFEIWLKEDESLEEMYEMMCLGLDGSAAA 480
Query: 684 LIIRLWVDVNWNHTACKHDSFFITRDEMDDIVDRWKKSIDLTENAHIDLIRNVLIEKKLL 505
LIIRLWVDVNWNHTACKHDSFFITRDEMDDIVDRWKKSIDLTENAHIDLIRNVLIEKKLL
Sbjct: 481 LIIRLWVDVNWNHTACKHDSFFITRDEMDDIVDRWKKSIDLTENAHIDLIRNVLIEKKLL 540
Query: 504 QDLLPTYTPSYIIYDFDVLLTKAKKMSEQDPPDIVIFSYLIWGAAVVCLRKFFLDRLKLE 325
QDLLPTYTPSYIIYDFDVLLTKAKKMSEQDPPDIVIFSYLIWGAAVVCLRKFFLDRLKLE
Sbjct: 541 QDLLPTYTPSYIIYDFDVLLTKAKKMSEQDPPDIVIFSYLIWGAAVVCLRKFFLDRLKLE 600
Query: 324 ISGQNAQEILMEIVVDSFTDDTGGRLLRAWTFAKLCRKKAYAMSHSNLLLRNYILESVKS 145
ISGQNAQEILMEIVVDSFTDDTGGRLLRAWTFAKLCRKKAYAMSHSNLLLRNYILESVKS
Sbjct: 601 ISGQNAQEILMEIVVDSFTDDTGGRLLRAWTFAKLCRKKAYAMSHSNLLLRNYILESVKS 660
Query: 144 MEECINKADIEKIWKQLEASDLQILKLSKNYFVTIGKDKFLYNKVTC 4
MEECINKADIEKIWKQLEASDLQILKLSKNYFVTIGKDKFLYNKVTC
Sbjct: 661 MEECINKADIEKIWKQLEASDLQILKLSKNYFVTIGKDKFLYNKVTC 707
>gi|32566893|ref|NP_872172.1| SNF2 related domain containing protein
family member (5T912) [Caenorhabditis elegans]
gi|23954198|emb|CAD54124.1| Hypothetical protein M04C3.1b
[Caenorhabditis elegans]
gi|24817529|emb|CAD54148.1| Hypothetical protein M04C3.1b
[Caenorhabditis elegans]
Length = 928
Score = 753 bits (1944), Expect = 0.0
Identities = 410/719 (57%), Positives = 514/719 (71%), Gaps = 13/719 (1%)
Frame = -1
Query: 2121 KNVMQDLKKLENRKDSGGIITVPTSDSEIDQVIISYILEQKEQGTSENNINLIVGTPKWI 1942
K +M ++K E+ D GGI+TV T+D +IDQVII+YIL+Q+EQGTS +NLIVGTP W+
Sbjct: 238 KEMMASMEKREDGDDQGGIVTVATNDRQIDQVIIAYILKQREQGTSRKKVNLIVGTPMWM 297
Query: 1941 KSWNLKFNGFIRAGILKDDDLLISYFYNRTKSRSSNELAKNDIVITTYDTLKTKSNLPIF 1762
KSW L+F+ FI+AG+L D+DL ISYFYNRTKSR+SNELA+NDIVITTYDTLK ++NLPIF
Sbjct: 298 KSWKLQFDEFIKAGLLNDNDLTISYFYNRTKSRNSNELARNDIVITTYDTLKKEANLPIF 357
Query: 1761 KAVDWERIILYEANKISDINTLRFGAICELKSKYRWCLTENFKQHSLAFFLKMYDVD--- 1591
KAV WERIILYEANKISD+NT+RF AIC+L++KYRWCLTE+ KQ SL+ FLK
Sbjct: 358 KAVKWERIILYEANKISDMNTVRFQAICQLQAKYRWCLTESPKQQSLSCFLKQESFGNGY 417
Query: 1590 SFKNTKSLEEHKLLVKDIEKDLEQVNLYWSSTELKMKRINFVLKPRQKEFTNSLAQCEAE 1411
S KNT+S+++ +D K +Q NL +SSTELK+K + VL RQKEF NS+AQCE
Sbjct: 418 SLKNTESVKKQNNFKEDTVK--QQANLIFSSTELKLKTMKIVLNTRQKEFMNSMAQCETG 475
Query: 1410 ST-YRTTAYGMNEDEIRKSIIAFLLDQDEKSERSSRAMGKTLLVMSPDVIKPWKELLESL 1234
T R AYGM E+EI ++IIAFLL+Q SER+ MG+TL+V+S + W + ++ L
Sbjct: 476 PTNERIAAYGMEENEIGEAIIAFLLEQKYNSERNDILMGETLVVVSDAKMDSWLKHVKKL 535
Query: 1233 LKEDYLAINYYGNETKKSNNSHVVVITTYDRFEKSYKKYIQWERIIFYGFSLANAKCNQH 1054
KED L I+ E ++ E +I+WERIIFYGFSL C
Sbjct: 536 AKEDDLNIHNIHEEDHICEKDYI--------RENKTSMFIEWERIIFYGFSL---HCAYK 584
Query: 1053 YQK-LLQLSVMHRWCLTEENTHRFSAHFLKGNNDKIGEDVVVNNIEQKLHLLSTTKYYFT 877
YQ+ QL + W +TE+ TH S HFL+ ++ T + +FT
Sbjct: 585 YQENRFQLYPDNCWYITEDITHLCSVHFLEA---------------KERSFFRTEENHFT 629
Query: 876 LMTSAIKASKANDCCQFSNDMWESIVSYTKEFFYKNFEIW-LKEDESLEEMYEMMCLGLD 700
+TSAI+ASKA++ QFSN+MW+SI SYT EFF KNFEIW +K DESLEEMYEMMCLGL
Sbjct: 630 FLTSAIQASKADEYRQFSNNMWQSIDSYTYEFFDKNFEIWPVKNDESLEEMYEMMCLGLS 689
Query: 699 GSAAALIIRLWVDVNWNHTACKHDSFFITRDEMDDIVDRWKKSIDLTENAHIDLIRNVLI 520
GSAAALIIRLWVDV+WNH AC +DSFFI+RDEMDDIV RWKKSIDL E+A IDLIR+VL+
Sbjct: 690 GSAAALIIRLWVDVHWNHIACDYDSFFISRDEMDDIVARWKKSIDLIEDAQIDLIRDVLV 749
Query: 519 EKKLLQD-LLPTY----TPSYIIYDFDVLLTKAKKMSEQDPPDIVIFSYLIWGAAVVCLR 355
EKKLL + + PTY +YIIY+F + L KAK+MSEQ+PPDIV+F LIWGAAV+CLR
Sbjct: 750 EKKLLSEHMKPTYFSTDMHTYIIYNFSMFLIKAKEMSEQNPPDIVMFCNLIWGAAVICLR 809
Query: 354 KFFLDRLKLEISGQNAQEILMEIVVDSFTDD--TGGRLLRAWTFAKLCRKKAYAMSHSNL 181
KFFL R +LE+S QE LM+IV++SFT++ GRL AW AK C K AY + +
Sbjct: 810 KFFLSRFQLEVSKPQIQEKLMKIVLESFTNEPIVCGRLYEAWEHAKRCCKSAYTLGYICQ 869
Query: 180 LLRNYILESVKSMEECINKADIEKIWKQLEASDLQILKLSKNYFVTIGKDKFLYNKVTC 4
LRN IL+ V MEECINKADIE+I KQLE SDLQIL+LSK Y + IG+++F YN++ C
Sbjct: 870 QLRNKILQLVGDMEECINKADIERIRKQLEVSDLQILELSKMYSMNIGEERFFYNRIAC 928
Score = 179 bits (454), Expect = 2e-43
Identities = 142/427 (33%), Positives = 215/427 (50%), Gaps = 26/427 (6%)
Frame = -1
Query: 2121 KNVMQDLKKLENRKDSGGIITVPTS--DSEIDQVIISYILEQK---EQGTSENNINLIVG 1957
+ +M + +LEN ++ GGIIT T+ D I QV+I +IL+Q+ ++ S+ N LI+G
Sbjct: 10 EELMVRIAELENGENHGGIITTTTATNDLRIRQVLIEHILQQRSLHKREESQANRTLIIG 69
Query: 1956 TPKWIKSWNLKFNGFIRAGILKDDDLLISYFYNR----TKSRSSNELAKNDIVITTYDTL 1789
+P WIK + ++ D + R T R + A DIV+ Y L
Sbjct: 70 SPSWIKKFEGPLENITKSSQNNDFSFIFFNGIRRPPTLTSIRKKRKRAGKDIVLINYYWL 129
Query: 1788 KTKSNLPIFKAVDWERIILYEAN-KISDINTLR-FGAICELKSKYRWCLTENFKQHSLA- 1618
+T NLP V WERII ++ K NT+ F A+C+LK+ +RWC+TEN KQ L
Sbjct: 130 ETIQNLP----VTWERIIFHDFTLKFVKSNTVPPFRALCKLKATFRWCITENHKQDRLVK 185
Query: 1617 FFLKMYDVDSFKNTKSLEEHKLLVKDIEKDLEQVNLYWSSTELKMKRINFVLKPRQKEFT 1438
FF S+ + EE K IE+ L++VNLY S E RI FVL +QKE
Sbjct: 186 FFNPSLGYISYFDA---EEKMKSTKKIEEFLKRVNLYLPSAE-PTDRIGFVLDLKQKEMM 241
Query: 1437 NSLAQCE-AESTYRTTAYGMNEDEIRKSIIAFLLDQDEKSERSSRAMGKTLLVMSPDVIK 1261
S+ + E + N+ +I + IIA++L Q E+ + L+V +P +K
Sbjct: 242 ASMEKREDGDDQGGIVTVATNDRQIDQVIIAYILKQREQGTSRKKV---NLIVGTPMWMK 298
Query: 1260 PWK----ELLES-LLKEDYLAINYYGNETKKSNNSHV----VVITTYDRFEKSYK----K 1120
WK E +++ LL ++ L I+Y+ N TK N++ + +VITTYD +K K
Sbjct: 299 SWKLQFDEFIKAGLLNDNDLTISYFYNRTKSRNSNELARNDIVITTYDTLKKEANLPIFK 358
Query: 1119 YIQWERIIFYGFSLANAKCNQHYQKLLQLSVMHRWCLTEENTHRFSAHFLKGNNDKIGED 940
++WERII Y + + +Q + QL +RWCLTE + + FLK + G
Sbjct: 359 AVKWERIILYEANKISDMNTVRFQAICQLQAKYRWCLTESPKQQSLSCFLK--QESFGNG 416
Query: 939 VVVNNIE 919
+ N E
Sbjct: 417 YSLKNTE 423
>gi|17562670|ref|NP_507782.1| SNF2 related domain containing protein
family member (5T912) [Caenorhabditis elegans]
gi|7505993|pir||T19465 hypothetical protein M04C3.1 - Caenorhabditis
elegans
gi|3874472|emb|CAB03924.1| Hypothetical protein M04C3.1a
[Caenorhabditis elegans]
gi|3878627|emb|CAB07268.1| Hypothetical protein M04C3.1a
[Caenorhabditis elegans]
Length = 946
Score = 746 bits (1925), Expect = 0.0
Identities = 410/737 (55%), Positives = 514/737 (69%), Gaps = 31/737 (4%)
Frame = -1
Query: 2121 KNVMQDLKKLENRKDSGGIITVPTSDSEIDQVIISYILEQKEQGTSENNINLIVGTPKWI 1942
K +M ++K E+ D GGI+TV T+D +IDQVII+YIL+Q+EQGTS +NLIVGTP W+
Sbjct: 238 KEMMASMEKREDGDDQGGIVTVATNDRQIDQVIIAYILKQREQGTSRKKVNLIVGTPMWM 297
Query: 1941 KSWNLKFNGFIRAGILKDDDLLISYFYNRTKSRSSNELAKNDIVITTYDTLKTKSNLPIF 1762
KSW L+F+ FI+AG+L D+DL ISYFYNRTKSR+SNELA+NDIVITTYDTLK ++NLPIF
Sbjct: 298 KSWKLQFDEFIKAGLLNDNDLTISYFYNRTKSRNSNELARNDIVITTYDTLKKEANLPIF 357
Query: 1761 KAVDWERIILYEANKISDINTLRFGAICELKSKYRWCLTENFKQHSLAFFLKMYDVD--- 1591
KAV WERIILYEANKISD+NT+RF AIC+L++KYRWCLTE+ KQ SL+ FLK
Sbjct: 358 KAVKWERIILYEANKISDMNTVRFQAICQLQAKYRWCLTESPKQQSLSCFLKQESFGNGY 417
Query: 1590 SFKNTKSLEEHKLLVKDIEKDLEQVNLYWSSTELKMKRINFVLKPRQKEFTNSLAQCEAE 1411
S KNT+S+++ +D K +Q NL +SSTELK+K + VL RQKEF NS+AQCE
Sbjct: 418 SLKNTESVKKQNNFKEDTVK--QQANLIFSSTELKLKTMKIVLNTRQKEFMNSMAQCETG 475
Query: 1410 ST-YRTTAYGMNEDEIRKSIIAFLLDQDEKSERSSRAMGKTLLVMSPDVIKPWKELLESL 1234
T R AYGM E+EI ++IIAFLL+Q SER+ MG+TL+V+S + W + ++ L
Sbjct: 476 PTNERIAAYGMEENEIGEAIIAFLLEQKYNSERNDILMGETLVVVSDAKMDSWLKHVKKL 535
Query: 1233 LKEDYLAINYYGNETKKSNNSHVVVITTYDRFEKSYKKYIQWERIIFYGFSLANAKCNQH 1054
KED L I+ E ++ E +I+WERIIFYGFSL C
Sbjct: 536 AKEDDLNIHNIHEEDHICEKDYI--------RENKTSMFIEWERIIFYGFSL---HCAYK 584
Query: 1053 YQK-LLQLSVMHRWCLTEENTHRFSAHFLKGNNDKIGEDVVVNNIEQKLHLLSTTKYYFT 877
YQ+ QL + W +TE+ TH S HFL+ ++ T + +FT
Sbjct: 585 YQENRFQLYPDNCWYITEDITHLCSVHFLEA---------------KERSFFRTEENHFT 629
Query: 876 LMTSAIKASKANDCCQFSNDMWESIVSYTKEFFYKNFEIW-LKEDESLEEMYEMMCLGLD 700
+TSAI+ASKA++ QFSN+MW+SI SYT EFF KNFEIW +K DESLEEMYEMMCLGL
Sbjct: 630 FLTSAIQASKADEYRQFSNNMWQSIDSYTYEFFDKNFEIWPVKNDESLEEMYEMMCLGLS 689
Query: 699 GSAAALIIRLWVDVNWNHTACKHDSFFITRDEMDDIVDRWKKSIDLTENAHIDLIRNVLI 520
GSAAALIIRLWVDV+WNH AC +DSFFI+RDEMDDIV RWKKSIDL E+A IDLIR+VL+
Sbjct: 690 GSAAALIIRLWVDVHWNHIACDYDSFFISRDEMDDIVARWKKSIDLIEDAQIDLIRDVLV 749
Query: 519 EKKLLQDLL-------------------PTY----TPSYIIYDFDVLLTKAKKMSEQDPP 409
EKKLL + + PTY +YIIY+F + L KAK+MSEQ+PP
Sbjct: 750 EKKLLSEHMIISSICKTIFLPNLQNEHKPTYFSTDMHTYIIYNFSMFLIKAKEMSEQNPP 809
Query: 408 DIVIFSYLIWGAAVVCLRKFFLDRLKLEISGQNAQEILMEIVVDSFTDD--TGGRLLRAW 235
DIV+F LIWGAAV+CLRKFFL R +LE+S QE LM+IV++SFT++ GRL AW
Sbjct: 810 DIVMFCNLIWGAAVICLRKFFLSRFQLEVSKPQIQEKLMKIVLESFTNEPIVCGRLYEAW 869
Query: 234 TFAKLCRKKAYAMSHSNLLLRNYILESVKSMEECINKADIEKIWKQLEASDLQILKLSKN 55
AK C K AY + + LRN IL+ V MEECINKADIE+I KQLE SDLQIL+LSK
Sbjct: 870 EHAKRCCKSAYTLGYICQQLRNKILQLVGDMEECINKADIERIRKQLEVSDLQILELSKM 929
Query: 54 YFVTIGKDKFLYNKVTC 4
Y + IG+++F YN++ C
Sbjct: 930 YSMNIGEERFFYNRIAC 946
Score = 179 bits (454), Expect = 2e-43
Identities = 142/427 (33%), Positives = 215/427 (50%), Gaps = 26/427 (6%)
Frame = -1
Query: 2121 KNVMQDLKKLENRKDSGGIITVPTS--DSEIDQVIISYILEQK---EQGTSENNINLIVG 1957
+ +M + +LEN ++ GGIIT T+ D I QV+I +IL+Q+ ++ S+ N LI+G
Sbjct: 10 EELMVRIAELENGENHGGIITTTTATNDLRIRQVLIEHILQQRSLHKREESQANRTLIIG 69
Query: 1956 TPKWIKSWNLKFNGFIRAGILKDDDLLISYFYNR----TKSRSSNELAKNDIVITTYDTL 1789
+P WIK + ++ D + R T R + A DIV+ Y L
Sbjct: 70 SPSWIKKFEGPLENITKSSQNNDFSFIFFNGIRRPPTLTSIRKKRKRAGKDIVLINYYWL 129
Query: 1788 KTKSNLPIFKAVDWERIILYEAN-KISDINTLR-FGAICELKSKYRWCLTENFKQHSLA- 1618
+T NLP V WERII ++ K NT+ F A+C+LK+ +RWC+TEN KQ L
Sbjct: 130 ETIQNLP----VTWERIIFHDFTLKFVKSNTVPPFRALCKLKATFRWCITENHKQDRLVK 185
Query: 1617 FFLKMYDVDSFKNTKSLEEHKLLVKDIEKDLEQVNLYWSSTELKMKRINFVLKPRQKEFT 1438
FF S+ + EE K IE+ L++VNLY S E RI FVL +QKE
Sbjct: 186 FFNPSLGYISYFDA---EEKMKSTKKIEEFLKRVNLYLPSAE-PTDRIGFVLDLKQKEMM 241
Query: 1437 NSLAQCE-AESTYRTTAYGMNEDEIRKSIIAFLLDQDEKSERSSRAMGKTLLVMSPDVIK 1261
S+ + E + N+ +I + IIA++L Q E+ + L+V +P +K
Sbjct: 242 ASMEKREDGDDQGGIVTVATNDRQIDQVIIAYILKQREQGTSRKKV---NLIVGTPMWMK 298
Query: 1260 PWK----ELLES-LLKEDYLAINYYGNETKKSNNSHV----VVITTYDRFEKSYK----K 1120
WK E +++ LL ++ L I+Y+ N TK N++ + +VITTYD +K K
Sbjct: 299 SWKLQFDEFIKAGLLNDNDLTISYFYNRTKSRNSNELARNDIVITTYDTLKKEANLPIFK 358
Query: 1119 YIQWERIIFYGFSLANAKCNQHYQKLLQLSVMHRWCLTEENTHRFSAHFLKGNNDKIGED 940
++WERII Y + + +Q + QL +RWCLTE + + FLK + G
Sbjct: 359 AVKWERIILYEANKISDMNTVRFQAICQLQAKYRWCLTESPKQQSLSCFLK--QESFGNG 416
Query: 939 VVVNNIE 919
+ N E
Sbjct: 417 YSLKNTE 423