Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C26F1_4
(156 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17563240|ref|NP_505006.1| ribosomal Protein, Large subunit (6... 108 3e-23
gi|15213798|gb|AAK92174.1| ribosomal protein L39 [Spodoptera fru... 91 7e-18
gi|24266968|gb|AAN52382.1| ribosomal protein L39 [Branchiostoma ... 88 5e-17
gi|17137474|ref|NP_477314.1| CG3997-PA [Drosophila melanogaster]... 83 1e-15
gi|4506647|ref|NP_000991.1| ribosomal protein L39; 60S ribosomal... 83 2e-15
gi|45383594|ref|NP_989603.1| ribosomal protein L39 [Gallus gallu... 83 2e-15
gi|2307014|gb|AAB65802.1| ribosomal protein 46 [Drosophila melan... 82 3e-15
gi|14585747|gb|AAK67460.1| ribosomal protein L39 [Culex pipiens ... 82 4e-15
gi|50344810|ref|NP_001002078.1| zgc:92371 [Danio rerio] >gnl|BL_... 82 4e-15
gi|50427201|ref|XP_462213.1| unnamed protein product [Debaryomyc... 79 2e-14
gi|13386082|ref|NP_080870.1| RIKEN cDNA 4930517K11 [Mus musculus... 79 3e-14
gi|1350751|sp|P48536|RL39_KLUMA 60S ribosomal protein L39 (L46) ... 79 4e-14
gi|45190457|ref|NP_984711.1| AEL150Wp [Eremothecium gossypii] >g... 78 6e-14
gi|16579830|ref|NP_443201.1| ribosomal protein L39-like protein;... 77 8e-14
gi|50303841|ref|XP_451867.1| unnamed protein product [Kluyveromy... 77 1e-13
gi|25573188|gb|AAN75164.1| RPL39 [Cryptococcus neoformans var. g... 77 1e-13
gi|46125087|ref|XP_387097.1| hypothetical protein FG06921.1 [Gib... 76 2e-13
gi|47497035|dbj|BAD19088.1| putative 60S ribosomal protein L39 [... 76 2e-13
gi|6322272|ref|NP_012346.1| Protein component of the large (60S)... 76 2e-13
gi|1710551|sp|P51425|RL39_MAIZE 60S RIBOSOMAL PROTEIN L39 >gnl|B... 76 2e-13
gi|46403024|gb|AAS92521.1| RPL39; hypothetical protein [Cryptoco... 75 3e-13
gi|25573219|gb|AAN75187.1| RPL39 [Cryptococcus neoformans var. g... 75 3e-13
gi|25956305|gb|AAN75719.1| RPL39 [Cryptococcus neoformans var. n... 75 3e-13
gi|18417922|ref|NP_567886.1| 60S ribosomal protein L39 (RPL39C) ... 75 3e-13
gi|14326102|gb|AAK60140.1| ribosomal protein L39 [Candida albicans] 75 4e-13
gi|15224691|ref|NP_180093.1| 60S ribosomal protein L39 (RPL39A) ... 74 1e-12
gi|19075766|ref|NP_588266.1| 60s ribosomal protein l39 [Schizosa... 74 1e-12
gi|18396099|ref|NP_566167.1| 60S ribosomal protein L39 (RPL39B) ... 73 2e-12
gi|1710553|sp|P51426|RL39_ORYSA 60S ribosomal protein L39 72 3e-12
gi|6041798|gb|AAF02118.1| putative ribosomal protein L39 [Arabid... 71 6e-12
gi|46226390|gb|EAK87395.1| 60S ribosomal protein L39, transcript... 61 6e-09
gi|32421877|ref|XP_331382.1| hypothetical protein [Neurospora cr... 54 1e-06
gi|20095054|ref|NP_614901.1| Ribosomal protein L39E [Methanopyru... 53 2e-06
gi|14521718|ref|NP_127194.1| LSU ribosomal protein L39E [Pyrococ... 52 3e-06
gi|11499649|ref|NP_070891.1| LSU ribosomal protein L39E (rpl39E)... 52 3e-06
gi|47226207|emb|CAG08354.1| unnamed protein product [Tetraodon n... 52 5e-06
gi|15679608|ref|NP_276725.1| ribosomal protein L39 [Methanotherm... 51 6e-06
gi|14591742|ref|NP_142498.1| Ribosomal protein L39E [Pyrococcus ... 51 6e-06
gi|18976751|ref|NP_578108.1| LSU ribosomal protein L39E [Pyrococ... 49 2e-05
gi|14602199|ref|NP_147707.1| S ribosomal protein L39E [Aeropyrum... 49 2e-05
gi|19173160|ref|NP_596963.1| 60S RIBOSOMAL PROTEIN L39 [Encephal... 49 3e-05
gi|82825|pir||S10053 ribosomal protein L39.e - fission yeast (Sc... 49 3e-05
gi|38105915|gb|EAA52285.1| hypothetical protein MG04977.4 [Magna... 48 7e-05
gi|29427961|sp|Q980F9|RL39_SULSO 50S ribosomal protein L39e 47 9e-05
gi|13540840|ref|NP_110528.1| 50S ribosomal protein L39E [Thermop... 47 9e-05
gi|15897288|ref|NP_341893.1| LSU ribosomal protein L39E (rpl39E)... 47 9e-05
gi|16081230|ref|NP_393532.1| probable 50S ribosomal protein L39 ... 47 1e-04
gi|15921661|ref|NP_377330.1| 51aa long hypothetical 50S ribosoma... 47 1e-04
gi|15791238|ref|NP_281062.1| 50S ribosomal proteins L39E; Rpl39e... 47 1e-04
gi|132973|sp|P22452|RL39_HALMA 50S ribosomal protein L39e (Hl39e... 47 2e-04
gi|41147210|ref|XP_373089.1| similar to hypothetical protein FLJ... 46 2e-04
gi|48852154|ref|ZP_00306344.1| COG2167: Ribosomal protein L39E [... 46 2e-04
gi|132974|sp|P13005|RL39_SULAC 50S ribosomal protein L39e (L46e)... 46 3e-04
gi|1076166|pir||S53698 ribosomal protein L39.eR - Sulfolobus aci... 46 3e-04
gi|48477277|ref|YP_022983.1| large subunit ribosomal protein L39... 45 4e-04
gi|20092907|ref|NP_618982.1| ribosomal protein L39e [Methanosarc... 44 8e-04
gi|23491781|dbj|BAC19834.1| ribosomal protein L39-like [Homo sap... 44 0.001
gi|15668870|ref|NP_247673.1| LSU ribosomal protein L39E [Methano... 43 0.002
gi|29429202|sp|P54056|RL39_METJA 50S ribosomal protein L39e 43 0.002
gi|15825969|pdb|1JJ2|1 Chain 1, Fully Refined Crystal Structure ... 43 0.002
gi|21226907|ref|NP_632829.1| LSU ribosomal protein L39E [Methano... 42 0.003
gi|29427842|sp|Q8PYQ5|RL39_METMA 50S ribosomal protein L39e 42 0.003
gi|45357722|ref|NP_987279.1| LSU ribosomal protein L39E [Methano... 41 0.006
gi|29427908|sp|Q8ZTX6|RL39_PYRAE 50S ribosomal protein L39e 41 0.008
gi|10120944|pdb|1FFK|Y Chain Y, Crystal Structure Of The Large R... 41 0.008
gi|1077851|pir||S56971 hypothetical protein YJL188c - yeast (Sac... 40 0.019
gi|31212627|ref|XP_315298.1| ENSANGP00000020965 [Anopheles gambi... 31 8.7
>gi|17563240|ref|NP_505006.1| ribosomal Protein, Large subunit (6.3
kD) (rpl-39) [Caenorhabditis elegans]
gi|1710550|sp|P52814|RL39_CAEEL 60S ribosomal protein L39
gi|7496563|pir||T15641 hypothetical protein C26F1.9 -
Caenorhabditis elegans
gi|1255380|gb|AAB37070.1| Ribosomal protein, large subunit protein
39 [Caenorhabditis elegans]
gi|12276033|gb|AAG50229.1| ribosomal protein L39 [Caenorhabditis
elegans]
gi|39581109|emb|CAE73187.1| Hypothetical protein CBG20586
[Caenorhabditis briggsae]
Length = 51
Score = 108 bits (270), Expect = 3e-23
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = -1
Query: 156 MSALKKSFIKRKLAKKQKQNRPMPQWVRMKTGNTMKYNAKRRHWRRTKLKL 4
MSALKKSFIKRKLAKKQKQNRPMPQWVRMKTGNTMKYNAKRRHWRRTKLKL
Sbjct: 1 MSALKKSFIKRKLAKKQKQNRPMPQWVRMKTGNTMKYNAKRRHWRRTKLKL 51