Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C28D4_7
(1062 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17538860|ref|NP_501736.1| putative mitochondrial protein fami... 700 0.0
gi|7496646|pir||T19539 hypothetical protein C28D4.5 - Caenorhabd... 652 0.0
gi|17538858|ref|NP_501735.1| predicted CDS, putative mitochondri... 626 e-178
gi|17538864|ref|NP_501737.1| putative mitochondrial protein fami... 625 e-178
gi|7496645|pir||T19542 hypothetical protein C28D4.4 - Caenorhabd... 551 e-156
gi|17538862|ref|NP_501734.1| predicted CDS, putative mitochondri... 503 e-141
gi|39598318|emb|CAE69011.1| Hypothetical protein CBG15004 [Caeno... 420 e-116
gi|39584689|emb|CAE72442.1| Hypothetical protein CBG19612 [Caeno... 221 3e-56
gi|17534975|ref|NP_494418.1| putative protein family member (2D2... 206 6e-52
gi|39596988|emb|CAE59215.1| Hypothetical protein CBG02528 [Caeno... 203 6e-51
gi|17538081|ref|NP_495150.1| putative mitochondrial protein fami... 195 2e-48
gi|39596997|emb|CAE59224.1| Hypothetical protein CBG02542 [Caeno... 194 4e-48
gi|17560608|ref|NP_507184.1| putative mitochondrial protein fami... 190 4e-47
gi|17559522|ref|NP_504868.1| predicted CDS, putative mitochondri... 188 2e-46
gi|17534423|ref|NP_495173.1| predicted CDS, putative mitochondri... 186 6e-46
gi|49035120|gb|AAC71165.2| Hypothetical protein F55C12.6 [Caenor... 186 6e-46
gi|39584691|emb|CAE72444.1| Hypothetical protein CBG19614 [Caeno... 185 1e-45
gi|17564168|ref|NP_506745.1| putative cytoplasmic protein family... 181 2e-44
gi|37619809|emb|CAA90357.2| Hypothetical protein F22B5.5 [Caenor... 141 3e-32
gi|17533399|ref|NP_495782.1| putative protein family member of a... 130 5e-29
gi|39587166|emb|CAE57634.1| Hypothetical protein CBG00619 [Caeno... 120 5e-26
gi|17557578|ref|NP_504888.1| putative cytoplasmic protein family... 70 1e-10
gi|25148971|ref|NP_503996.2| putative cytoplasmic protein family... 66 1e-09
gi|33620913|gb|AAB52316.2| Hypothetical protein C03G6.17 [Caenor... 66 2e-09
gi|39588686|emb|CAE58210.1| Hypothetical protein CBG01305 [Caeno... 65 3e-09
gi|39594278|emb|CAE71856.1| Hypothetical protein CBG18900 [Caeno... 64 5e-09
gi|17566810|ref|NP_507614.1| putative cytoplasmic protein family... 62 2e-08
gi|25528371|pir||A89411 protein ZK228.3 [imported] - Caenorhabdi... 61 4e-08
gi|17566812|ref|NP_507615.1| GCN5-related N-acetyltransferase fa... 59 1e-07
gi|34365965|gb|AAQ65202.1| Hypothetical protein F31F7.1c [Caenor... 58 3e-07
gi|34365964|gb|AAQ65201.1| Hypothetical protein F31F7.1a [Caenor... 58 3e-07
gi|34146983|gb|AAA83448.2| Hypothetical protein F44A2.7 [Caenorh... 58 3e-07
gi|39579510|emb|CAE56201.1| Hypothetical protein CBG23825 [Caeno... 58 4e-07
gi|39588685|emb|CAE58209.1| Hypothetical protein CBG01304 [Caeno... 57 6e-07
gi|39588684|emb|CAE58208.1| Hypothetical protein CBG01303 [Caeno... 57 7e-07
gi|17560932|ref|NP_505408.1| predicted CDS, putative cytoplasmic... 55 2e-06
gi|17560424|ref|NP_504603.1| putative cytoplasmic protein family... 54 6e-06
gi|32566928|ref|NP_872176.1| putative cytoplasmic protein family... 54 6e-06
gi|17560012|ref|NP_507745.1| putative cytoplasmic protein family... 51 4e-05
gi|39581210|emb|CAE70407.1| Hypothetical protein CBG16978 [Caeno... 50 9e-05
gi|46314802|ref|ZP_00215387.1| COG0454: Histone acetyltransferas... 50 1e-04
gi|46915273|emb|CAG22046.1| hypothetical acetyltransferase [Phot... 47 6e-04
gi|48837703|ref|ZP_00294666.1| COG0454: Histone acetyltransferas... 47 0.001
gi|23125077|ref|ZP_00107027.1| COG0454: Histone acetyltransferas... 47 0.001
gi|45250012|gb|AAS55725.1| glucose-1-phosphate thymidyltransfera... 45 0.002
gi|33637041|gb|AAQ23679.1| glucose-1-phosphate thymidyltransfera... 44 0.005
gi|21228037|ref|NP_633959.1| Acetyltransferase [Methanosarcina m... 42 0.018
gi|20089666|ref|NP_615741.1| acetyltransferase (GNAT) family pro... 42 0.024
gi|41205690|gb|AAR99610.1| glucose-1-phosphate thymidyltransfera... 40 0.12
gi|23113446|ref|ZP_00098821.1| COG1209: dTDP-glucose pyrophospho... 39 0.20
gi|16588696|gb|AAL26874.1| glucose-1-phosphate thymidylyltransfe... 38 0.35
gi|16330051|ref|NP_440779.1| unknown protein [Synechocystis sp. ... 38 0.35
gi|15828947|ref|NP_326307.1| conserved hypothetical protein [Myc... 38 0.35
gi|24379858|ref|NP_721813.1| putative glucose-1-phosphate thymid... 38 0.45
gi|33862783|ref|NP_894343.1| GCN5-related N-acetyltransferase [P... 38 0.45
gi|7023703|dbj|BAA92059.1| unnamed protein product [Homo sapiens... 37 0.59
gi|37655177|ref|NP_060825.2| zinc finger protein 415 [Homo sapiens] 37 0.59
gi|23002181|ref|ZP_00045859.1| COG1209: dTDP-glucose pyrophospho... 37 0.59
gi|46854957|gb|AAH69668.1| ZNF415 protein [Homo sapiens] 37 0.59
gi|15895870|ref|NP_349219.1| Xylulose kinase [Clostridium acetob... 37 0.77
gi|16357459|gb|AAK27854.2| glucose 1-phosphate thymidyltransfera... 37 0.77
gi|46130302|ref|ZP_00165124.2| COG0454: Histone acetyltransferas... 37 0.77
gi|50293943|ref|XP_449383.1| unnamed protein product [Candida gl... 37 0.77
gi|14717004|emb|CAC44166.1| glucose 1 ph thymidilate transferase... 37 0.77
gi|7592816|dbj|BAA94403.1| D-glucose-1-phosphate thymidylyltrans... 37 1.0
gi|3320399|gb|AAC38757.1| glucose-1-phosphate thymidyl transfera... 36 1.3
gi|13377430|gb|AAK20691.1| RmlA [Streptococcus pneumoniae] 36 1.3
gi|1710029|sp|P55253|RMA3_ECOLI Glucose-1-phosphate thymidylyltr... 36 1.3
gi|2804721|gb|AAC38704.1| glucose-1-phosphate thymidyl transfera... 36 1.3
gi|7434861|pir||T00103 glucose-1-phosphate thymidylyltransferase... 36 1.3
gi|28377960|ref|NP_784852.1| glucose-1-phosphate thymidylyltrans... 36 1.3
gi|23509678|ref|NP_702345.1| hypothetical protein, conserved [Pl... 36 1.7
gi|4406249|gb|AAD19913.1| glucose-1-phosphate thymidylyl transfe... 36 1.7
gi|3907610|gb|AAC78674.1| glucose-1-phosphate thimidylyl transfe... 36 1.7
gi|50303647|ref|XP_451765.1| unnamed protein product [Kluyveromy... 36 1.7
gi|12232609|gb|AAG49404.1| glucose-1-phosphate thymidylyltransfe... 36 1.7
gi|39997181|ref|NP_953132.1| glucose-1-phosphate thymidylyltrans... 36 1.7
gi|15718522|gb|AAL06018.1| putative glucose-1-phosphate thymidyl... 35 2.2
gi|50429171|gb|AAT77170.1| RmlA [Escherichia coli] 35 2.2
gi|48845226|ref|ZP_00299511.1| COG1209: dTDP-glucose pyrophospho... 35 2.2
gi|23099876|ref|NP_693342.1| glucose 1-phosphate thymidyltransfe... 35 2.2
gi|39645359|gb|AAH63880.1| ZNF415 protein [Homo sapiens] 35 2.2
gi|38093555|ref|XP_142755.3| similar to zinc finger protein [Mus... 35 2.9
gi|1944620|emb|CAB05930.1| glucose-1-phosphate thymidylyltransfe... 35 2.9
gi|18376703|gb|AAL68426.1| glucose 1-phosphate thymidyl transfer... 35 2.9
gi|29725985|gb|AAO88918.1| glucose-1-phosphate thymidylyltransfe... 35 3.8
gi|15674953|ref|NP_269127.1| glucose-1-phosphate thymidyl transf... 35 3.8
gi|19745995|ref|NP_607131.1| glucose-1-phosphate thymidyl transf... 35 3.8
gi|50083370|ref|YP_044880.1| dTDP-glucose pyrophosphorylase (glu... 35 3.8
gi|30424581|ref|NP_776099.1| cDNA sequence BC027344 [Mus musculu... 35 3.8
gi|30248686|ref|NP_840756.1| ADP-glucose pyrophosphorylase [Nitr... 35 3.8
gi|1944160|dbj|BAA19634.1| glucose-1-phosphate-thymidylyltransfe... 35 3.8
gi|20522143|ref|NP_620659.1| putative RNA-dependent RNA polymera... 35 3.8
gi|19550670|gb|AAL91482.1| putative glucose-1-phosphate thymidyl... 35 3.8
gi|9714084|emb|CAC01394.1| glucose-1-phosphate thymidyltransfera... 35 3.8
gi|31206953|ref|XP_312443.1| ENSANGP00000021337 [Anopheles gambi... 35 3.8
gi|29726005|gb|AAO88934.1| glucose-1-phosphate thymidylyltransfe... 34 5.0
gi|15902364|ref|NP_357914.1| The type 2 capsule locus of Strepto... 34 5.0
gi|29726029|gb|AAO88954.1| glucose-1-phosphate thymidylyltransfe... 34 5.0
gi|18309598|ref|NP_561532.1| glucose-1-phosphate thymidylyltrans... 34 5.0
gi|28210469|ref|NP_781413.1| putative surface/cell-adhesion prot... 34 5.0
gi|22122799|ref|NP_666343.1| hypothetical protein MGC18736 [Mus ... 34 5.0
gi|21595007|gb|AAH32201.1| Unknown (protein for MGC:35617) [Mus ... 34 5.0
gi|9957852|gb|AAG09528.1| glucose-1-phosphate thymidylyltransfer... 34 6.5
gi|27065634|pdb|1MC3|A Chain A, Crystal Structure Of Rffh >gnl|B... 34 6.5
gi|38075379|ref|XP_193732.2| similar to Hypothetical protein MGC... 34 6.5
gi|29726015|gb|AAO88942.1| glucose-1-phosphate thymidylyltransfe... 34 6.5
gi|16131645|ref|NP_418236.1| glucose-1-phosphate thymidylyltrans... 34 6.5
gi|15804380|ref|NP_290420.1| glucose-1-phosphate thymidylyltrans... 34 6.5
gi|17942758|pdb|1H5R|B Chain B, Thymidylyltransferase Complexed ... 34 6.5
gi|17942756|pdb|1H5S|D Chain D, Thymidylyltransferase Complexed ... 34 6.5
gi|16129979|ref|NP_416543.1| glucose-1-phosphate thymidylyltrans... 34 6.5
gi|23473981|ref|ZP_00129276.1| COG1209: dTDP-glucose pyrophospho... 34 6.5
gi|32265599|ref|NP_859631.1| conserved hypothetical protein [Hel... 34 6.5
gi|38095240|ref|XP_356300.1| similar to Hypothetical protein MGC... 34 6.5
gi|27753573|dbj|BAC55207.1| glucose-1-phosphate thymidyltransfer... 34 6.5
gi|9957847|gb|AAG09524.1| glucose-1-phosphate thymidylyltransfer... 33 8.5
gi|47077016|dbj|BAD18442.1| unnamed protein product [Homo sapiens] 33 8.5
gi|9957862|gb|AAG09536.1| glucose-1-phosphate thymidylyltransfer... 33 8.5
gi|46190662|ref|ZP_00121206.2| COG1209: dTDP-glucose pyrophospho... 33 8.5
gi|49482557|ref|YP_039781.1| conserved hypothetical protein [Sta... 33 8.5
gi|33860891|ref|NP_892452.1| GCN5-related N-acetyltransferase [P... 33 8.5
gi|46445757|ref|YP_007122.1| probable glucose-1-phosphate thymid... 33 8.5
gi|38093984|ref|XP_142768.3| hypothetical protein XP_142768 [Mus... 33 8.5
>gi|17538860|ref|NP_501736.1| putative mitochondrial protein family
member of ancient origin (40.7 kD) (4K510)
[Caenorhabditis elegans]
gi|9367063|emb|CAB05125.2| Hypothetical protein C28D4.5
[Caenorhabditis elegans]
Length = 353
Score = 700 bits (1807), Expect = 0.0
Identities = 337/353 (95%), Positives = 337/353 (95%)
Frame = -1
Query: 1062 MLSKSLALGRRLXXXXXXXXXXXXXXXXTVDGKPRDALTIHNVDFVIDPDEKMVDEYMKV 883
MLSKSLALGRRL TVDGKPRDALTIHNVDFVIDPDEKMVDEYMKV
Sbjct: 1 MLSKSLALGRRLTKISSSVKSISSITFKTVDGKPRDALTIHNVDFVIDPDEKMVDEYMKV 60
Query: 882 YGNQRFNFKRNDIDIWRKSFKDSYSLWLVCLKGTNKIVQMSHVLNFPPLLSHNDILHQYH 703
YGNQRFNFKRNDIDIWRKSFKDSYSLWLVCLKGTNKIVQMSHVLNFPPLLSHNDILHQYH
Sbjct: 61 YGNQRFNFKRNDIDIWRKSFKDSYSLWLVCLKGTNKIVQMSHVLNFPPLLSHNDILHQYH 120
Query: 702 GFFWVDPDYRGKDSMAIMDYIEKHRARNQSDNDAGTFLTTAVTMWTKMHGHADYKHIMYV 523
GFFWVDPDYRGKDSMAIMDYIEKHRARNQSDNDAGTFLTTAVTMWTKMHGHADYKHIMYV
Sbjct: 121 GFFWVDPDYRGKDSMAIMDYIEKHRARNQSDNDAGTFLTTAVTMWTKMHGHADYKHIMYV 180
Query: 522 SYYKPDEMQIPEDLNLDGIFLKNATEVPDMDIVKYDNTVFPYERSKYMLNLLRDPEGFGK 343
SYYKPDEMQIPEDLNLDGIFLKNATEVPDMDIVKYDNTVFPYERSKYMLNLLRDPEGFGK
Sbjct: 181 SYYKPDEMQIPEDLNLDGIFLKNATEVPDMDIVKYDNTVFPYERSKYMLNLLRDPEGFGK 240
Query: 342 VAYDNNGKVIGFGNVIIYPSGECVLTPLYADDSKVAQAIFKSILKEIPLNDKKLLRFQIR 163
VAYDNNGKVIGFGNVIIYPSGECVLTPLYADDSKVAQAIFKSILKEIPLNDKKLLRFQIR
Sbjct: 241 VAYDNNGKVIGFGNVIIYPSGECVLTPLYADDSKVAQAIFKSILKEIPLNDKKLLRFQIR 300
Query: 162 SIDQCEGGFEWIQPFVKNPIRKEIMGHMAGSSHPPTVNYKKTYANTPYTTCVI 4
SIDQCEGGFEWIQPFVKNPIRKEIMGHMAGSSHPPTVNYKKTYANTPYTTCVI
Sbjct: 301 SIDQCEGGFEWIQPFVKNPIRKEIMGHMAGSSHPPTVNYKKTYANTPYTTCVI 353
>gi|7496646|pir||T19539 hypothetical protein C28D4.5 - Caenorhabditis
elegans
Length = 614
Score = 652 bits (1682), Expect = 0.0
Identities = 311/316 (98%), Positives = 313/316 (98%), Gaps = 2/316 (0%)
Frame = -1
Query: 945 IHNVD--FVIDPDEKMVDEYMKVYGNQRFNFKRNDIDIWRKSFKDSYSLWLVCLKGTNKI 772
I ++D FVIDPDEKMVDEYMKVYGNQRFNFKRNDIDIWRKSFKDSYSLWLVCLKGTNKI
Sbjct: 299 IRSIDRYFVIDPDEKMVDEYMKVYGNQRFNFKRNDIDIWRKSFKDSYSLWLVCLKGTNKI 358
Query: 771 VQMSHVLNFPPLLSHNDILHQYHGFFWVDPDYRGKDSMAIMDYIEKHRARNQSDNDAGTF 592
VQMSHVLNFPPLLSHNDILHQYHGFFWVDPDYRGKDSMAIMDYIEKHRARNQSDNDAGTF
Sbjct: 359 VQMSHVLNFPPLLSHNDILHQYHGFFWVDPDYRGKDSMAIMDYIEKHRARNQSDNDAGTF 418
Query: 591 LTTAVTMWTKMHGHADYKHIMYVSYYKPDEMQIPEDLNLDGIFLKNATEVPDMDIVKYDN 412
LTTAVTMWTKMHGHADYKHIMYVSYYKPDEMQIPEDLNLDGIFLKNATEVPDMDIVKYDN
Sbjct: 419 LTTAVTMWTKMHGHADYKHIMYVSYYKPDEMQIPEDLNLDGIFLKNATEVPDMDIVKYDN 478
Query: 411 TVFPYERSKYMLNLLRDPEGFGKVAYDNNGKVIGFGNVIIYPSGECVLTPLYADDSKVAQ 232
TVFPYERSKYMLNLLRDPEGFGKVAYDNNGKVIGFGNVIIYPSGECVLTPLYADDSKVAQ
Sbjct: 479 TVFPYERSKYMLNLLRDPEGFGKVAYDNNGKVIGFGNVIIYPSGECVLTPLYADDSKVAQ 538
Query: 231 AIFKSILKEIPLNDKKLLRFQIRSIDQCEGGFEWIQPFVKNPIRKEIMGHMAGSSHPPTV 52
AIFKSILKEIPLNDKKLLRFQIRSIDQCEGGFEWIQPFVKNPIRKEIMGHMAGSSHPPTV
Sbjct: 539 AIFKSILKEIPLNDKKLLRFQIRSIDQCEGGFEWIQPFVKNPIRKEIMGHMAGSSHPPTV 598
Query: 51 NYKKTYANTPYTTCVI 4
NYKKTYANTPYTTCVI
Sbjct: 599 NYKKTYANTPYTTCVI 614
Score = 526 bits (1356), Expect = e-148
Identities = 253/304 (83%), Positives = 269/304 (88%)
Frame = -1
Query: 1062 MLSKSLALGRRLXXXXXXXXXXXXXXXXTVDGKPRDALTIHNVDFVIDPDEKMVDEYMKV 883
MLSKSLAL + L T DGKPRDALT+HNVDF+IDPDEKMVDEYMKV
Sbjct: 1 MLSKSLALCQNLTKRLSSVKLISSKTFKTADGKPRDALTVHNVDFIIDPDEKMVDEYMKV 60
Query: 882 YGNQRFNFKRNDIDIWRKSFKDSYSLWLVCLKGTNKIVQMSHVLNFPPLLSHNDILHQYH 703
YGNQR NFKRNDIDIWRKSFKDSYS WLVCLKGTNKIVQMSHVLNFPPL +HNDILHQYH
Sbjct: 61 YGNQRLNFKRNDIDIWRKSFKDSYSFWLVCLKGTNKIVQMSHVLNFPPLPAHNDILHQYH 120
Query: 702 GFFWVDPDYRGKDSMAIMDYIEKHRARNQSDNDAGTFLTTAVTMWTKMHGHADYKHIMYV 523
GFFWVDPDYR DSMAI DYIEKHR+RNQ++ND GT+L A M +++G DY+HIMYV
Sbjct: 121 GFFWVDPDYRATDSMAIFDYIEKHRSRNQAENDLGTYLPHAANMIKRIYGTNDYQHIMYV 180
Query: 522 SYYKPDEMQIPEDLNLDGIFLKNATEVPDMDIVKYDNTVFPYERSKYMLNLLRDPEGFGK 343
SYY+PDEMQ+P+DLNLDGIF KNATEVPDMDIVKYDNTVFPYERSKYMLNLLRDPEGFGK
Sbjct: 181 SYYQPDEMQVPDDLNLDGIFFKNATEVPDMDIVKYDNTVFPYERSKYMLNLLRDPEGFGK 240
Query: 342 VAYDNNGKVIGFGNVIIYPSGECVLTPLYADDSKVAQAIFKSILKEIPLNDKKLLRFQIR 163
VAYDNNGKVIGFGNVIIYPSGECVLTPLYADDSKVAQAIFKSILKEIPLNDKKLLRFQIR
Sbjct: 241 VAYDNNGKVIGFGNVIIYPSGECVLTPLYADDSKVAQAIFKSILKEIPLNDKKLLRFQIR 300
Query: 162 SIDQ 151
SID+
Sbjct: 301 SIDR 304