Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C40H1_2
(1119 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17552764|ref|NP_499051.1| cytoplasmic Polyadenylation Element... 776 0.0
gi|50261656|gb|AAT72412.1| CPB-1 [Caenorhabditis japonica] >gnl|... 499 e-140
gi|50261652|gb|AAT72410.1| CPB-1 [Caenorhabditis remanei] >gnl|B... 495 e-139
gi|50261654|gb|AAT72411.1| CPB-1 [Caenorhabditis sp. CB5161] >gn... 494 e-138
gi|50261650|gb|AAT72409.1| CPB-1 [Caenorhabditis briggsae] >gnl|... 483 e-135
gi|39590869|emb|CAE65243.1| Hypothetical protein CBG10126 [Caeno... 476 e-133
gi|50261658|gb|AAT72413.1| CPB-1 [Caenorhabditis sp. PS1010] >gn... 448 e-125
gi|24661225|ref|NP_729429.1| CG5735-PA [Drosophila melanogaster]... 279 7e-74
gi|24661213|ref|NP_648266.1| CG5735-PB [Drosophila melanogaster]... 279 7e-74
gi|48096487|ref|XP_392469.1| similar to CG5735-PB [Apis mellifera] 276 8e-73
gi|31197867|ref|XP_307881.1| ENSANGP00000021766 [Anopheles gambi... 274 2e-72
gi|50345881|ref|NP_055727.3| cytoplasmic polyadenylation element... 274 3e-72
gi|50749613|ref|XP_421688.1| PREDICTED: similar to KIAA0940 prot... 274 3e-72
gi|26006231|dbj|BAC41458.1| mKIAA0940 protein [Mus musculus] 274 3e-72
gi|40788991|dbj|BAA76784.2| KIAA0940 protein [Homo sapiens] 274 3e-72
gi|38142478|ref|NP_938042.1| cytoplasmic polyadenylation element... 274 3e-72
gi|12697891|dbj|BAB21764.1| KIAA1673 protein [Homo sapiens] 273 4e-72
gi|12853700|dbj|BAB29821.1| unnamed protein product [Mus musculus] 273 4e-72
gi|50511043|dbj|BAD32507.1| mKIAA1673 protein [Mus musculus] 273 4e-72
gi|22477915|gb|AAH36899.1| CPEB4 protein [Homo sapiens] 273 4e-72
gi|33518723|gb|AAQ20844.1| cytoplasmic polyadenylation element b... 273 4e-72
gi|32698755|ref|NP_085130.1| cytoplasmic polyadenylation element... 273 4e-72
gi|34870618|ref|XP_220269.2| similar to hypothetical protein [Ra... 273 4e-72
gi|12853731|dbj|BAB29832.1| unnamed protein product [Mus musculus] 273 5e-72
gi|41055809|ref|NP_957275.1| similar to cytoplasmic polyadenylat... 272 1e-71
gi|34878302|ref|XP_341228.1| similar to mKIAA0940 protein [Rattu... 271 2e-71
gi|33188439|ref|NP_872291.1| cytoplasmic polyadenylation element... 271 2e-71
gi|50747194|ref|XP_420779.1| PREDICTED: similar to cytoplasmic p... 271 2e-71
gi|33188441|ref|NP_872587.1| cytoplasmic polyadenylation element... 271 2e-71
gi|28565281|ref|NP_787951.1| cytoplasmic polyadenylation element... 271 2e-71
gi|47216826|emb|CAG10148.1| unnamed protein product [Tetraodon n... 271 3e-71
gi|47219371|emb|CAG11000.1| unnamed protein product [Tetraodon n... 270 6e-71
gi|22209060|gb|AAH36444.1| Cytoplasmic polyadenylation element b... 267 3e-70
gi|47210117|emb|CAF91683.1| unnamed protein product [Tetraodon n... 247 4e-64
gi|50755271|ref|XP_414678.1| PREDICTED: similar to cytoplasmic p... 233 8e-60
gi|47210116|emb|CAF91682.1| unnamed protein product [Tetraodon n... 221 2e-56
gi|47205780|emb|CAF91663.1| unnamed protein product [Tetraodon n... 215 2e-54
gi|50261680|gb|AAT72425.1| CPB-2 [Caenorhabditis sp. PS1010] >gn... 199 1e-49
gi|50261674|gb|AAT72421.1| CPB-2 [Caenorhabditis sp. CB5161] >gn... 186 6e-46
gi|50261672|gb|AAT72420.1| CPB-2 [Caenorhabditis remanei] >gnl|B... 182 9e-45
gi|17532629|ref|NP_495236.1| cytoplasmic Polyadenylation Element... 182 9e-45
gi|32699228|gb|AAK31467.2| Cpeb polya binding family protein 2 [... 182 9e-45
gi|50261670|gb|AAT72419.1| CPB-2 [Caenorhabditis briggsae] >gnl|... 181 3e-44
gi|50261678|gb|AAT72424.1| CPB-2C [Caenorhabditis japonica] >gnl... 181 3e-44
gi|39597033|emb|CAE59260.1| Hypothetical protein CBG02588 [Caeno... 181 3e-44
gi|50261676|gb|AAT72422.1| CPB-2A [Caenorhabditis japonica] >gnl... 181 3e-44
gi|50261677|gb|AAT72423.1| CPB-2B [Caenorhabditis japonica] >gnl... 181 3e-44
gi|11691924|dbj|BAB19051.1| cytoplasmic polyadenylation element ... 162 1e-38
gi|4519511|dbj|BAA75637.1| ZOR-1 [Danio rerio] >gnl|BL_ORD_ID|91... 162 2e-38
gi|19923836|ref|NP_085097.2| cytoplasmic polyadenylation element... 162 2e-38
gi|12659216|gb|AAK01240.1| cytoplasmic polyadenylation element-b... 162 2e-38
gi|29792282|gb|AAH50629.1| CPEB1 protein [Homo sapiens] 161 2e-38
gi|23273958|gb|AAH35348.1| CPEB1 protein [Homo sapiens] 161 2e-38
gi|48102516|ref|XP_395376.1| similar to Cell division cycle prot... 161 2e-38
gi|1079284|pir||A55377 CPE-binding protein - African clawed frog... 160 6e-38
gi|6681003|ref|NP_031781.1| cytoplasmic polyadenylation element-... 160 6e-38
gi|24371284|ref|NP_571502.1| Orb/CPEB-related RNA-binding protei... 159 8e-38
gi|18858237|ref|NP_571800.1| ZOR-2 [Danio rerio] >gnl|BL_ORD_ID|... 159 8e-38
gi|34857409|ref|XP_218858.2| similar to cytoplasmic polyadenylat... 159 8e-38
gi|10435122|dbj|BAB14496.1| unnamed protein product [Homo sapiens] 159 1e-37
gi|24649269|ref|NP_524460.2| CG10868-PA [Drosophila melanogaster... 158 2e-37
gi|24649275|ref|NP_732850.1| CG10868-PC [Drosophila melanogaster... 158 2e-37
gi|24649271|ref|NP_732848.1| CG10868-PB [Drosophila melanogaster... 158 2e-37
gi|25009748|gb|AAN71048.1| AT10134p [Drosophila melanogaster] 158 2e-37
gi|25009796|gb|AAN71070.1| AT14906p [Drosophila melanogaster] 158 2e-37
gi|103288|pir||S24577 ovarian protein - fruit fly (Drosophila me... 157 5e-37
gi|4218957|gb|AAD12246.1| cytoplasmic polyadenylation element-bi... 155 1e-36
gi|14029842|gb|AAK52835.1| cytoplasmic polyadenylation element-b... 155 2e-36
gi|14029840|gb|AAK52834.1| cytoplasmic polyadenylation element-b... 155 2e-36
gi|50261694|gb|AAT72432.1| FOG-1 [Caenorhabditis remanei] >gnl|B... 149 9e-35
gi|47219266|emb|CAG11728.1| unnamed protein product [Tetraodon n... 147 3e-34
gi|34862882|ref|XP_220043.2| similar to cytoplasmic polyadenylat... 147 4e-34
gi|34865570|ref|XP_347317.1| similar to cytoplasmic polyadenylat... 147 4e-34
gi|39598286|emb|CAE68978.1| Hypothetical protein CBG14960 [Caeno... 146 7e-34
gi|50261668|gb|AAT72418.1| CPB-3 [Caenorhabditis sp. PS1010] >gn... 146 1e-33
gi|50261696|gb|AAT72433.1| FOG-1 [Caenorhabditis sp. CB5161] >gn... 145 2e-33
gi|50261664|gb|AAT72416.1| CPB-3 [Caenorhabditis sp. CB5161] >gn... 143 8e-33
gi|50261662|gb|AAT72415.1| CPB-3 [Caenorhabditis remanei] >gnl|B... 142 1e-32
gi|17506299|ref|NP_491680.1| cytoplasmic Polyadenylation Element... 142 1e-32
gi|50752691|ref|XP_413713.1| PREDICTED: similar to CPEB1 protein... 142 2e-32
gi|39595421|emb|CAE60459.1| Hypothetical protein CBG04067 [Caeno... 140 5e-32
gi|50261666|gb|AAT72417.1| CPB-3 [Caenorhabditis japonica] >gnl|... 139 2e-31
gi|17507847|ref|NP_491123.1| feminization Of Germline FOG-1, Cyt... 138 2e-31
gi|50261698|gb|AAT72434.1| FOG-1L [Caenorhabditis japonica] >gnl... 137 6e-31
gi|47230709|emb|CAF99902.1| unnamed protein product [Tetraodon n... 136 1e-30
gi|50261702|gb|AAT72436.1| FOG-1 [Caenorhabditis sp. PS1010] >gn... 134 5e-30
gi|32563919|ref|NP_871826.1| feminization Of Germline FOG-1, Cyt... 129 2e-28
gi|50261700|gb|AAT72435.1| FOG-1S [Caenorhabditis japonica] >gnl... 124 4e-27
gi|31207597|ref|XP_312765.1| ENSANGP00000020374 [Anopheles gambi... 120 7e-26
gi|5230685|gb|AAD40961.1| CPEB-related RNA binding protein [Oryz... 114 3e-24
gi|39589477|emb|CAE74506.1| Hypothetical protein CBG22257 [Caeno... 108 2e-22
gi|13358952|dbj|BAB33089.1| hypothetical protein [Macaca fascicu... 106 9e-22
gi|26346737|dbj|BAC37017.1| unnamed protein product [Mus musculus] 92 3e-17
gi|34364855|emb|CAE45860.1| hypothetical protein [Homo sapiens] 88 4e-16
gi|31241405|ref|XP_321133.1| ENSANGP00000018356 [Anopheles gambi... 56 1e-06
gi|15292697|gb|AAK92717.1| putative RNA-binding protein [Arabido... 54 7e-06
gi|5650424|dbj|BAA82622.1| Musashi [Halocynthia roretzi] 53 1e-05
gi|6648193|gb|AAF21191.1| putative RNA-binding protein [Arabidop... 52 2e-05
gi|18398061|ref|NP_566321.1| heterogeneous nuclear ribonucleopro... 52 2e-05
gi|30680456|ref|NP_850539.1| heterogeneous nuclear ribonucleopro... 52 2e-05
gi|50059467|gb|AAT02209.2| AUF1 similar protein [Paracentrotus l... 52 2e-05
gi|48139295|ref|XP_393451.1| similar to ENSANGP00000018356 [Apis... 51 4e-05
gi|27694771|gb|AAH43814.1| Hnrpab-prov protein [Xenopus laevis] 50 1e-04
gi|12803583|gb|AAH02625.1| HNRPAB protein [Homo sapiens] >gnl|BL... 49 2e-04
gi|21757498|dbj|BAC05134.1| unnamed protein product [Homo sapien... 49 2e-04
gi|42542905|gb|AAH66454.1| Heterogeneous nuclear ribonucleoprote... 49 2e-04
gi|47086857|ref|NP_997752.1| heterogeneous nuclear ribonucleopro... 49 2e-04
gi|49257602|gb|AAH74212.1| Unknown (protein for MGC:83385) [Xeno... 48 4e-04
gi|13786156|ref|NP_112620.1| heterogeneous nuclear ribonucleopro... 48 5e-04
gi|6562847|emb|CAB62554.1| heterogeneous nuclear ribonucleoprote... 48 5e-04
gi|6754222|ref|NP_034578.1| heterogeneous nuclear ribonucleoprot... 48 5e-04
gi|26345118|dbj|BAC36208.1| unnamed protein product [Mus musculus] 48 5e-04
gi|27695334|gb|AAH43069.1| Hnrpab protein [Mus musculus] 48 5e-04
gi|4378711|gb|AAD19638.1| nucleic acid binding factor pRM10 [Rat... 48 5e-04
gi|6562845|emb|CAB62553.1| heterogeneous nuclear ribonucleoprote... 48 5e-04
gi|12851175|dbj|BAB28963.1| unnamed protein product [Mus musculus] 48 5e-04
gi|38175737|dbj|BAC55617.2| putative heterogeneous nuclear ribon... 47 6e-04
gi|14110404|ref|NP_112556.1| heterogeneous nuclear ribonucleopro... 47 6e-04
gi|7705365|ref|NP_057280.1| RNA binding motif protein 19 [Homo s... 47 6e-04
gi|4758542|ref|NP_004490.1| heterogeneous nuclear ribonucleoprot... 47 6e-04
gi|40788328|dbj|BAA31657.2| KIAA0682 protein [Homo sapiens] 47 8e-04
gi|18423760|ref|NP_568826.1| RNA recognition motif (RRM)-contain... 47 8e-04
gi|30696616|ref|NP_851195.1| RNA recognition motif (RRM)-contain... 47 8e-04
gi|22531168|gb|AAM97088.1| RNA-binding protein-like [Arabidopsis... 47 8e-04
gi|13279134|gb|AAH04289.1| RBM19 protein [Homo sapiens] >gnl|BL_... 47 8e-04
gi|13124658|sp|Q9Y4C8|K682_HUMAN Probable RNA-binding protein KI... 47 8e-04
gi|45384514|ref|NP_990659.1| single stranded D box binding facto... 47 8e-04
gi|9758187|dbj|BAB08572.1| RNA-binding protein-like [Arabidopsis... 47 8e-04
gi|1362732|pir||S56750 single stranded D box binding factor 2 - ... 47 8e-04
gi|34909850|ref|NP_916272.1| OSJNBb0053G03.6 [Oryza sativa (japo... 47 0.001
gi|1346955|sp|P48809|RB27_DROME Heterogeneous nuclear ribonucleo... 47 0.001
gi|17136728|ref|NP_476869.1| CG10377-PA [Drosophila melanogaster... 47 0.001
gi|50746575|ref|XP_420560.1| PREDICTED: similar to heterogeneous... 46 0.001
gi|4885423|ref|NP_005454.1| heterogeneous nuclear ribonucleoprot... 46 0.001
gi|34876235|ref|XP_223190.2| similar to heterogeneous nuclear ri... 46 0.001
gi|39644771|gb|AAH07392.2| HNRPDL protein [Homo sapiens] 46 0.001
gi|38327502|gb|AAR17782.1| CArG binding factor [Homo sapiens] 46 0.001
gi|17544098|ref|NP_500963.1| ribonucleoprotein (33.5 kD) (4H89) ... 46 0.001
gi|15010818|dbj|BAB62188.1| JKTBP1delta6 [Homo sapiens] 46 0.001
gi|7710036|ref|NP_057899.1| heterogeneous nuclear ribonucleoprot... 46 0.001
gi|7446333|pir||JW0079 heterogeneous nuclear ribonucleoprotein h... 46 0.001
gi|2547076|dbj|BAA22860.1| A+U-rich element RNA binding factor [... 46 0.001
gi|47221330|emb|CAF97248.1| unnamed protein product [Tetraodon n... 46 0.002
gi|30794154|ref|NP_083038.1| RIKEN cDNA 1200009A02 [Mus musculus... 46 0.002
gi|26343509|dbj|BAC35411.1| unnamed protein product [Mus musculus] 46 0.002
gi|1079438|pir||S53710 ribonucleoprotein - chicken >gnl|BL_ORD_I... 45 0.002
gi|50756781|ref|XP_415318.1| PREDICTED: similar to RNA binding m... 45 0.002
gi|5052976|gb|AAD38787.1| hnRNP A/B related protein [Felis catus] 45 0.003
gi|31241273|ref|XP_321067.1| ENSANGP00000011319 [Anopheles gambi... 45 0.003
gi|18416794|ref|NP_567753.1| RNA recognition motif (RRM)-contain... 45 0.004
gi|7487039|pir||T08931 hypothetical protein T15N24.100 - Arabido... 45 0.004
gi|14388456|dbj|BAB60767.1| hypothetical protein [Macaca fascicu... 45 0.004
gi|39583312|emb|CAE60104.1| Hypothetical protein CBG03639 [Caeno... 44 0.005
gi|50305631|ref|XP_452776.1| unnamed protein product [Kluyveromy... 44 0.007
gi|15226106|ref|NP_180899.1| heterogeneous nuclear ribonucleopro... 44 0.007
gi|17738267|ref|NP_524543.1| CG9983-PB [Drosophila melanogaster]... 44 0.009
gi|24650833|ref|NP_733250.1| CG9983-PE [Drosophila melanogaster]... 44 0.009
gi|24650831|ref|NP_733249.1| CG9983-PA [Drosophila melanogaster]... 44 0.009
gi|24650838|ref|NP_733252.1| CG9983-PD [Drosophila melanogaster]... 44 0.009
gi|18422817|ref|NP_568685.1| heterogeneous nuclear ribonucleopro... 44 0.009
gi|21553963|gb|AAM63044.1| RNA-binding protein-like [Arabidopsis... 44 0.009
gi|9758790|dbj|BAB09088.1| RNA-binding protein-like [Arabidopsis... 44 0.009
gi|15237960|ref|NP_199496.1| RNA recognition motif (RRM)-contain... 43 0.012
gi|21554835|gb|AAM63703.1| unknown [Arabidopsis thaliana] 43 0.012
gi|31203505|ref|XP_310701.1| ENSANGP00000010117 [Anopheles gambi... 43 0.012
gi|39584187|emb|CAE61562.1| Hypothetical protein CBG05471 [Caeno... 43 0.012
gi|25456498|pir||T52461 RNA binding protein [imported] - Arabido... 43 0.015
gi|15217975|ref|NP_176143.1| RNA-binding protein (XF41) [Arabido... 43 0.015
gi|46249880|gb|AAH68788.1| MGC81335 protein [Xenopus laevis] 43 0.015
gi|35215091|dbj|BAC92448.1| RNA recognition motif (RRM)-containi... 43 0.015
gi|47087353|ref|NP_998557.1| zgc:66169 [Danio rerio] >gnl|BL_ORD... 42 0.020
gi|17554332|ref|NP_497799.1| MaSashi, fly neural family, RNA-bin... 42 0.020
gi|50754902|ref|XP_414536.1| PREDICTED: similar to KIAA1673 prot... 42 0.020
gi|7506587|pir||T24148 hypothetical protein R10E9.1 - Caenorhabd... 42 0.020
gi|47086935|ref|NP_998467.1| zgc:77052 [Danio rerio] >gnl|BL_ORD... 42 0.020
gi|37531112|ref|NP_919858.1| putative RNA-binding protein [Oryza... 42 0.034
gi|28374304|gb|AAH45260.1| Hnrpa1-prov protein [Xenopus laevis] 41 0.044
gi|48094845|ref|XP_394284.1| similar to Ubiquitin ligase SIAH1 (... 41 0.044
gi|41150277|ref|XP_370982.1| similar to Heterogeneous nuclear ri... 41 0.057
gi|12847801|dbj|BAB27715.1| unnamed protein product [Mus musculus] 41 0.057
gi|6324449|ref|NP_014518.1| Subunit of cleavage factor I, a five... 41 0.057
gi|6681425|dbj|BAA88672.1| CiMsi [Ciona intestinalis] 40 0.075
gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster] 40 0.075
gi|47938744|gb|AAH72090.1| LOC397751 protein [Xenopus laevis] 40 0.075
gi|47218115|emb|CAG09987.1| unnamed protein product [Tetraodon n... 40 0.075
gi|41151081|ref|XP_208200.3| similar to Heterogeneous nuclear ri... 40 0.098
gi|28175291|gb|AAH45124.1| MGC53310 protein [Xenopus laevis] 40 0.098
gi|47214361|emb|CAG01206.1| unnamed protein product [Tetraodon n... 40 0.098
gi|18875324|ref|NP_573451.1| DAZ associated protein 1 [Mus muscu... 40 0.098
gi|4504445|ref|NP_002127.1| heterogeneous nuclear ribonucleoprot... 40 0.13
gi|2500575|sp|Q28521|ROA1_MACMU Heterogeneous nuclear ribonucleo... 40 0.13
gi|8393547|ref|NP_058944.1| heterogeneous nuclear ribonucleoprot... 40 0.13
gi|20877266|ref|XP_123260.1| similar to Heterogeneous nuclear ri... 40 0.13
gi|34862313|ref|XP_343165.1| similar to DAZ associated protein 1... 40 0.13
gi|133252|sp|P09867|ROA1_BOVIN Heterogeneous nuclear ribonucleop... 40 0.13
gi|133254|sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleop... 40 0.13
gi|14043070|ref|NP_112420.1| heterogeneous nuclear ribonucleopro... 40 0.13
gi|20664272|pdb|1L3K|A Chain A, Up1, The Two Rna-Recognition Mot... 40 0.13
gi|542646|pir||S40774 ribonucleoprotein - African clawed frog >g... 40 0.13
gi|38328245|gb|AAH62235.1| Hnrpa1 protein [Rattus norvegicus] 40 0.13
gi|29126350|gb|AAO66542.1| unknown protein [Oryza sativa (japoni... 40 0.13
gi|34872583|ref|XP_222200.2| similar to RIKEN cDNA 1200009A02 [R... 40 0.13
gi|5542530|pdb|2UP1|A Chain A, Structure Of Up1-Telomeric Dna Co... 40 0.13
gi|1711240|dbj|BAA13161.1| TIS [Mus musculus] 40 0.13
gi|477707|pir||B47369 RNA-binding protein (alternatively spliced... 39 0.17
gi|87650|pir||S02061 heterogeneous ribonuclear particle protein ... 39 0.17
gi|34864430|ref|XP_236024.2| similar to Heterogeneous nuclear ri... 39 0.17
gi|476947|pir||A47369 RNA-binding protein (alternatively spliced... 39 0.17
gi|25121993|ref|NP_733839.1| musashi 2 isoform b [Homo sapiens] ... 39 0.17
gi|46806499|dbj|BAD17623.1| putative heterogeneous nuclearribonu... 39 0.17
gi|46806500|dbj|BAD17624.1| putative heterogeneous nuclearribonu... 39 0.17
gi|1351109|sp|Q08473|SQD_DROME RNA-binding protein squid (Hetero... 39 0.17
gi|2554653|pdb|1UP1| Up1, The Two Rna-Recognition Motif Domain ... 39 0.22
gi|7440062|pir||T06458 nucleolin homolog - garden pea >gnl|BL_OR... 39 0.22
gi|47228465|emb|CAG05285.1| unnamed protein product [Tetraodon n... 39 0.22
gi|42408771|dbj|BAD10006.1| putative ribonucleoprotein [Oryza sa... 39 0.22
gi|49114983|gb|AAH72838.1| Unknown (protein for IMAGE:4970895) [... 39 0.22
gi|2194069|pdb|1HA1| Hnrnp A1 (Rbd1,2) From Homo Sapiens 39 0.22
gi|24646609|ref|NP_731826.1| CG16901-PA [Drosophila melanogaster... 39 0.28
gi|24646605|ref|NP_652209.1| CG16901-PC [Drosophila melanogaster... 39 0.28
gi|24646607|ref|NP_731825.1| CG16901-PB [Drosophila melanogaster... 39 0.28
gi|15242719|ref|NP_198865.1| RNA recognition motif (RRM)-contain... 39 0.28
gi|283666|pir||B41732 heterogeneous nuclear RNP protein clone pH... 39 0.28
gi|26341844|dbj|BAC34584.1| unnamed protein product [Mus musculus] 38 0.37
gi|8671754|gb|AAF78364.1| DAZ associated protein 1 [Homo sapiens] 38 0.37
gi|47216059|emb|CAG11390.1| unnamed protein product [Tetraodon n... 38 0.37
gi|32307763|gb|AAP79278.1| musashi nrp-1 [Saccoglossus kowalevskii] 38 0.37
gi|47939618|gb|AAH71945.1| Heterogeneous nuclear ribonucleoprote... 38 0.37
gi|133256|sp|P21522|ROA1_SCHAM Heterogeneous nuclear ribonucleop... 38 0.37
gi|17157989|ref|NP_473384.1| Musashi homolog 2 [Mus musculus] >g... 38 0.37
gi|49522454|gb|AAH75497.1| Unknown (protein for MGC:89358) [Xeno... 38 0.37
gi|15982560|dbj|BAB69484.1| RNA-binding protein Musashi2-S [Mus ... 38 0.37
gi|20373175|ref|NP_620412.1| musashi 2 isoform a [Homo sapiens] ... 38 0.37
gi|47223956|emb|CAG06133.1| unnamed protein product [Tetraodon n... 38 0.37
gi|50746577|ref|XP_420561.1| PREDICTED: similar to Heterogeneous... 38 0.37
gi|6671602|ref|NP_031542.1| heterogeneous nuclear ribonucleoprot... 38 0.49
gi|44887872|sp|Q9JII5|DZP1_MOUSE DAZ-associated protein 1 (Delet... 38 0.49
gi|25470886|ref|NP_061832.2| DAZ associated protein 1 isoform b;... 37 0.63
gi|50548677|ref|XP_501808.1| hypothetical protein [Yarrowia lipo... 37 0.63
gi|44887870|sp|Q98SJ2|DZP1_XENLA DAZ-associated protein 1 (Delet... 37 0.63
gi|1209409|emb|CAA90716.1| hnRNP protein [Chironomus tentans] 37 0.63
gi|25470890|ref|NP_733829.1| DAZ associated protein 1 isoform a;... 37 0.63
gi|41056104|ref|NP_957403.1| ribonucleoprotein [Danio rerio] >gn... 37 0.63
gi|28571891|ref|NP_733108.2| CG5099-PB [Drosophila melanogaster]... 37 0.63
gi|21430706|gb|AAM51031.1| RH49436p [Drosophila melanogaster] 37 0.63
gi|31218718|ref|XP_316702.1| ENSANGP00000002641 [Anopheles gambi... 37 0.63
gi|17864096|ref|NP_524577.1| CG5099-PA [Drosophila melanogaster]... 37 0.63
gi|46137515|ref|XP_390449.1| hypothetical protein FG10273.1 [Gib... 37 0.63
gi|50604140|gb|AAH77252.1| Unknown (protein for MGC:79866) [Xeno... 37 0.63
gi|49523226|gb|AAH75294.1| Unknown (protein for MGC:88935) [Xeno... 37 0.83
gi|21430048|gb|AAM50702.1| GM13065p [Drosophila melanogaster] 37 0.83
gi|46227298|gb|EAK88248.1| nucleolar protein NOP4; rrm domain co... 37 0.83
gi|41126933|ref|XP_372975.1| similar to TAR DNA-binding protein-... 37 0.83
gi|870743|dbj|BAA09522.1| heterogeneous nuclear ribonucleoprotei... 37 1.1
gi|41202654|ref|XP_018399.3| similar to Heterogeneous nuclear ri... 37 1.1
gi|870747|dbj|BAA09524.1| heterogeneous nuclear ribonucleoprotei... 37 1.1
gi|47217429|emb|CAG00789.1| unnamed protein product [Tetraodon n... 37 1.1
gi|9588098|dbj|BAB03466.1| RNA binding protein p42 AUF1 [Rattus ... 37 1.1
gi|9588100|dbj|BAB03467.1| RNA binding protein p40 AUF1 [Rattus ... 37 1.1
gi|133262|sp|P17132|ROC_RAT Heterogeneous nuclear ribonucleoprot... 37 1.1
gi|433344|gb|AAC50056.1| p37 AUF1 37 1.1
gi|24584762|ref|NP_609822.1| CG12288-PA [Drosophila melanogaster... 37 1.1
gi|9588102|dbj|BAB03468.1| RNA binding protein p37 AUF1 [Rattus ... 37 1.1
gi|14110417|ref|NP_112737.1| heterogeneous nuclear ribonucleopro... 37 1.1
gi|14110414|ref|NP_002129.2| heterogeneous nuclear ribonucleopro... 37 1.1
gi|29145079|gb|AAH49098.1| Hnrpd protein [Mus musculus] 37 1.1
gi|1082775|pir||A54601 RNA-binding protein AUF1 - human 37 1.1
gi|2773158|gb|AAB96683.1| heterogeneous nuclear ribonucleoprotei... 37 1.1
gi|15029896|gb|AAH11172.1| Hnrpd protein [Mus musculus] 37 1.1
gi|13242324|ref|NP_077380.1| RNA binding protein p45AUF1 [Rattus... 37 1.1
gi|14110420|ref|NP_112738.1| heterogeneous nuclear ribonucleopro... 37 1.1
gi|33516945|sp|Q60668|ROD_MOUSE Heterogeneous nuclear ribonucleo... 37 1.1
gi|38014499|gb|AAH60442.1| MGC68807 protein [Xenopus laevis] 36 1.4
gi|22328624|ref|NP_193166.2| heterogeneous nuclear ribonucleopro... 36 1.4
gi|47086453|ref|NP_997961.1| musashi homolog 2 [Danio rerio] >gn... 36 1.4
gi|18406831|ref|NP_564759.1| glycine-rich RNA-binding protein, p... 36 1.4
gi|133258|sp|P17130|ROA1_XENLA Heterogeneous nuclear ribonucleop... 36 1.8
gi|16552365|dbj|BAB71295.1| unnamed protein product [Homo sapiens] 36 1.8
gi|104063|pir||B34840 heterogeneous ribonuclear particle protein... 36 1.8
gi|30689808|ref|NP_850422.1| RNA recognition motif (RRM)-contain... 36 1.8
gi|7485542|pir||T01598 hypothetical protein At2g44710 [imported]... 36 1.8
gi|17508587|ref|NP_493023.1| small nucleic-acid-binding protein;... 36 1.8
gi|38099110|gb|EAA46497.1| hypothetical protein MG08840.4 [Magna... 36 1.8
gi|3747052|gb|AAC77437.1| estrogen response element binding prot... 36 1.8
gi|45187713|ref|NP_983936.1| ADL160Wp [Eremothecium gossypii] >g... 35 2.4
gi|30682550|ref|NP_851001.1| RNA recognition motif (RRM)-contain... 35 2.4
gi|34854812|ref|XP_212982.2| similar to Heterogeneous nuclear ri... 35 2.4
gi|1710624|sp|P51990|RO22_XENLA Heterogeneous nuclear ribonucleo... 35 2.4
gi|30682553|ref|NP_683559.2| RNA recognition motif (RRM)-contain... 35 2.4
gi|19074992|ref|NP_586498.1| ENDOPLASMIC RETICULUM MEMBRANE PROT... 35 2.4
gi|38085423|ref|XP_123387.2| similar to Heterogeneous nuclear ri... 35 3.1
gi|49617279|gb|AAT67404.1| heterogeneous nuclear ribonucleoprote... 35 3.1
gi|50555934|ref|XP_505375.1| hypothetical protein [Yarrowia lipo... 35 3.1
gi|48096470|ref|XP_392465.1| similar to Bmsqd-2 [Apis mellifera] 35 3.1
gi|32482381|gb|AAP84380.1| FCA protein [Triticum aestivum] 35 3.1
gi|42658041|ref|XP_208373.4| similar to Heterogeneous nuclear ri... 35 3.1
gi|420052|pir||A44192 heterogeneous nuclear ribonucleoprotein C-... 35 3.1
gi|181914|gb|AAA35781.1| DNA-binding protein 35 3.1
gi|13436308|gb|AAH04945.1| Unknown (protein for IMAGE:3615335) [... 35 3.1
gi|38086779|ref|XP_284747.2| similar to Heterogeneous nuclear ri... 35 3.1
gi|34897348|ref|NP_910020.1| putative small nuclear ribonucleopr... 35 4.1
gi|6322982|ref|NP_013054.1| Ribonucleoprotein that contains two ... 35 4.1
gi|47086749|ref|NP_997810.1| zgc:77366; wu:fc01g05 [Danio rerio]... 35 4.1
gi|30682379|ref|NP_180012.2| RNA recognition motif (RRM)-contain... 35 4.1
gi|41148740|ref|XP_372050.1| similar to Heterogeneous nuclear ri... 35 4.1
gi|34897382|ref|NP_910037.1| putative RNA-binding protein [Oryza... 35 4.1
gi|12856118|dbj|BAB30571.1| unnamed protein product [Mus musculus] 34 5.4
gi|28704033|gb|AAH47508.1| BRD1 protein [Homo sapiens] >gnl|BL_O... 34 5.4
gi|46445066|gb|EAL04337.1| hypothetical protein CaO19.13410 [Can... 34 5.4
gi|18399701|ref|NP_565513.1| RNA recognition motif (RRM)-contain... 34 5.4
gi|39590552|emb|CAE66292.1| Hypothetical protein CBG11539 [Caeno... 34 5.4
gi|39580200|emb|CAE71707.1| Hypothetical protein CBG18684 [Caeno... 34 5.4
gi|17558740|ref|NP_506360.1| heterogeneous nuclear ribonucleopro... 34 5.4
gi|7439958|pir||G71404 probable ribonucleoprotein - Arabidopsis ... 34 5.4
gi|11321642|ref|NP_055392.1| bromodomain containing protein 1; B... 34 5.4
gi|29150367|gb|AAO72376.1| putative RNA binding ribonucleoprotei... 34 7.0
gi|28201305|dbj|BAC56813.1| putative Heterogeneous nuclear ribon... 34 7.0
gi|34854840|ref|XP_229963.2| similar to Heterogeneous nuclear ri... 34 7.0
gi|22218793|pdb|1IQT|A Chain A, Solution Structure Of The C-Term... 34 7.0
gi|32482067|gb|AAP84390.1| FCA protein [Triticum aestivum] 34 7.0
gi|133248|sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chlorop... 34 7.0
gi|27709546|ref|XP_229073.1| similar to heterogeneous nuclear ri... 33 9.2
gi|6118522|gb|AAF04132.1| poly-U binding splicing factor [Drosop... 33 9.2
gi|19224321|gb|AAL86452.1| half pint [Drosophila melanogaster] 33 9.2
gi|24655228|ref|NP_525123.2| CG12085-PA [Drosophila melanogaster... 33 9.2
gi|32411183|ref|XP_326072.1| hypothetical protein [Neurospora cr... 33 9.2
gi|50554951|ref|XP_504884.1| hypothetical protein [Yarrowia lipo... 33 9.2
gi|49071742|ref|XP_400160.1| hypothetical protein UM02545.1 [Ust... 33 9.2
gi|47204070|emb|CAF87349.1| unnamed protein product [Tetraodon n... 33 9.2
gi|24655233|ref|NP_728610.1| CG12085-PB [Drosophila melanogaster... 33 9.2
gi|49080620|ref|XP_403808.1| hypothetical protein UM06193.1 [Ust... 33 9.2
gi|47550699|ref|NP_999861.1| synaptotagmin binding, cytoplasmic ... 33 9.2
gi|784909|dbj|BAA07210.1| Bmsqd-1 [Bombyx mori] 33 9.2
gi|49072414|ref|XP_400496.1| hypothetical protein UM02881.1 [Ust... 33 9.2
gi|133276|sp|P07029|ROU2_HUMAN Heterogeneous nuclear ribonucleop... 33 9.2
gi|21553602|gb|AAM62695.1| glycine-rich RNA-binding protein-like... 33 9.2
gi|18420085|ref|NP_568388.1| RNA recognition motif (RRM)-contain... 33 9.2
gi|34557754|ref|NP_907569.1| TRANSCRIPTIONAL REGULATOR (NIFA FAM... 33 9.2
gi|1465873|dbj|BAA07211.1| Bmsqd-2 [Bombyx mori] 33 9.2
gi|22328805|ref|NP_193696.2| RNA recognition motif (RRM)-contain... 33 9.2
gi|47226530|emb|CAG08546.1| unnamed protein product [Tetraodon n... 33 9.2
gi|25402887|pir||E86327 protein F18O14.19 [imported] - Arabidops... 33 9.2
gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex... 33 9.2
gi|38087359|ref|XP_142143.2| similar to heterogeneous nuclear ri... 33 9.2
>gi|17552764|ref|NP_499051.1| cytoplasmic Polyadenylation
Element-Binding protein (42.3 kD) (cpb-1) [Caenorhabditis
elegans]
gi|465815|sp|Q03571|YLF1_CAEEL Hypothetical RNA-binding protein
C40H1.1 in chromosome III
gi|280531|pir||S28296 hypothetical protein C40H1.1 - Caenorhabditis
elegans
gi|3874814|emb|CAA79552.1| Hypothetical protein C40H1.1
[Caenorhabditis elegans]
Length = 372
Score = 776 bits (2003), Expect = 0.0
Identities = 372/372 (100%), Positives = 372/372 (100%)
Frame = +1
Query: 1 MVEIKKINGHRYMEVTDPQAVSAPPEYKRLDGSLMGVSKSCLEASKKRPISAEPLYSRKV 180
MVEIKKINGHRYMEVTDPQAVSAPPEYKRLDGSLMGVSKSCLEASKKRPISAEPLYSRKV
Sbjct: 1 MVEIKKINGHRYMEVTDPQAVSAPPEYKRLDGSLMGVSKSCLEASKKRPISAEPLYSRKV 60
Query: 181 FIGGLPIDVSEEQVWATFGAFGKVLIDWPRRPEHNAERAEQELKKGSGSRAVTGYVFLVF 360
FIGGLPIDVSEEQVWATFGAFGKVLIDWPRRPEHNAERAEQELKKGSGSRAVTGYVFLVF
Sbjct: 61 FIGGLPIDVSEEQVWATFGAFGKVLIDWPRRPEHNAERAEQELKKGSGSRAVTGYVFLVF 120
Query: 361 THERSVQELVNACEFYEDKYYLQLSSPTMTDKAVQVRPWRLSDIDYFCNDNSSVDHRRTV 540
THERSVQELVNACEFYEDKYYLQLSSPTMTDKAVQVRPWRLSDIDYFCNDNSSVDHRRTV
Sbjct: 121 THERSVQELVNACEFYEDKYYLQLSSPTMTDKAVQVRPWRLSDIDYFCNDNSSVDHRRTV 180
Query: 541 FIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISGR 720
FIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISGR
Sbjct: 181 FIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISGR 240
Query: 721 FVQVNHAENNKRVEIKPYVMEEQYCDECEGRLCKHNYAPYFCGHASCLQYYCEGCWDRMH 900
FVQVNHAENNKRVEIKPYVMEEQYCDECEGRLCKHNYAPYFCGHASCLQYYCEGCWDRMH
Sbjct: 241 FVQVNHAENNKRVEIKPYVMEEQYCDECEGRLCKHNYAPYFCGHASCLQYYCEGCWDRMH 300
Query: 901 IGKNEDNKLEDQHYPMVRTGDQTRLLKHLPHRSSGFKPAPVFHPSSQSTTAKILAYGDQS 1080
IGKNEDNKLEDQHYPMVRTGDQTRLLKHLPHRSSGFKPAPVFHPSSQSTTAKILAYGDQS
Sbjct: 301 IGKNEDNKLEDQHYPMVRTGDQTRLLKHLPHRSSGFKPAPVFHPSSQSTTAKILAYGDQS 360
Query: 1081 QRQFSATPSYSF 1116
QRQFSATPSYSF
Sbjct: 361 QRQFSATPSYSF 372