Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C41G7_3
(594 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|7497297|pir||T19892 hypothetical protein C41G7.1 - Caenorhabd... 372 e-102
gi|17505971|ref|NP_492525.1| human Survival Motor Neuron gene ho... 372 e-102
gi|39579756|emb|CAE56707.1| Hypothetical protein CBG24493 [Caeno... 219 3e-56
gi|13259531|ref|NP_075015.1| survival of motor neuron 2, centrom... 77 2e-13
gi|13259512|ref|NP_075012.1| survival of motor neuron 1, telomer... 77 3e-13
gi|11968084|ref|NP_071954.1| survival motor neuron [Rattus norve... 68 1e-10
gi|2832313|gb|AAC01747.1| survival motor neuron [Rattus norvegicus] 67 2e-10
gi|38383032|gb|AAH62404.1| Survival motor neuron [Rattus norvegi... 67 2e-10
gi|45383718|ref|NP_989530.1| survival motor neuron [Gallus gallu... 66 5e-10
gi|18859385|ref|NP_571266.1| survival motor neuron [Danio rerio]... 64 2e-09
gi|27447276|gb|AAM18209.1| survival of motor neuron [Felis catus] 63 5e-09
gi|38174294|gb|AAH60942.1| Survival motor neuron [Danio rerio] 60 4e-08
gi|31075799|gb|AAP42462.1| survival motor neuron [Canis familiaris] 56 4e-07
gi|3024614|sp|O02771|SMN_CANFA Survival motor neuron protein >gn... 56 4e-07
gi|1588319|prf||2208336A SMN gene 55 7e-07
gi|6755580|ref|NP_035550.1| survival motor neuron [Mus musculus]... 55 1e-06
gi|26023801|gb|AAN77614.1| survival of motor neuron protein [Mus... 55 1e-06
gi|13259527|ref|NP_075013.1| survival of motor neuron 2, centrom... 54 2e-06
gi|4507091|ref|NP_000335.1| survival of motor neuron 1, telomeri... 54 2e-06
gi|736411|gb|AAA64505.1| putative open reading frame; duplicate ... 54 2e-06
gi|27462896|gb|AAO15639.1| survival motor neuron protein [Bos ta... 50 2e-05
gi|27462898|gb|AAO15640.1| survival motor neuron protein [Bos ta... 50 2e-05
gi|28849927|ref|NP_783632.1| survival of motor neuron 1, telomer... 50 2e-05
gi|47215909|emb|CAG00384.1| unnamed protein product [Tetraodon n... 49 7e-05
gi|46249514|gb|AAH68721.1| LOC398438 protein [Xenopus laevis] 48 2e-04
gi|15809658|gb|AAL07278.1| survival motor neuron [Xenopus laevis] 48 2e-04
gi|27924238|gb|AAH45073.1| LOC398438 protein [Xenopus laevis] 48 2e-04
gi|3450887|gb|AAC32608.1| survival motor neuron protein [Danio r... 46 4e-04
gi|48101280|ref|XP_395091.1| hypothetical protein XP_395091 [Api... 44 0.002
gi|17647939|ref|NP_524112.1| CG16725-PA [Drosophila melanogaster... 44 0.002
gi|34864382|ref|XP_213506.2| similar to RIKEN cDNA 2410004J23 [R... 44 0.002
gi|16944474|emb|CAD11375.1| conserved hypothetical protein [Neur... 44 0.002
gi|6942162|gb|AAF32332.1| survival motor neuron protein [Oryzias... 44 0.002
gi|27369569|ref|NP_766017.1| RIKEN cDNA 2410004J23 [Mus musculus... 42 0.008
gi|5032113|ref|NP_005862.1| survival motor neuron domain contain... 41 0.014
gi|47086827|ref|NP_997766.1| survival motor neuron domain contai... 41 0.014
gi|48140540|ref|XP_393514.1| similar to LD28068p [Apis mellifera] 41 0.019
gi|15077040|gb|AAK83041.1| survival motor neuron protein [Bos ta... 39 0.055
gi|50749781|ref|XP_421753.1| PREDICTED: similar to Survival of m... 39 0.055
gi|32415319|ref|XP_328139.1| hypothetical protein [Neurospora cr... 38 0.12
gi|31231113|ref|XP_318468.1| ENSANGP00000014329 [Anopheles gambi... 38 0.16
gi|50369151|gb|AAH76962.1| Unknown (protein for MGC:89399) [Xeno... 38 0.16
gi|38102896|gb|EAA49677.1| hypothetical protein MG08592.4 [Magna... 37 0.21
gi|46431353|gb|EAK90932.1| hypothetical protein CaO19.9371 [Cand... 37 0.21
gi|46431346|gb|EAK90926.1| hypothetical protein CaO19.1805 [Cand... 37 0.27
gi|15077042|gb|AAK83042.1| survival motor neuron protein [Bos ta... 36 0.46
gi|31216850|ref|XP_316313.1| ENSANGP00000020645 [Anopheles gambi... 35 0.79
gi|29376400|ref|NP_815554.1| permease, putative [Enterococcus fa... 35 0.79
gi|12584630|emb|CAC27400.1| survival motor neuron protein [Plati... 35 0.79
gi|48826661|ref|ZP_00287849.1| COG0577: ABC-type antimicrobial p... 35 1.0
gi|49094046|ref|XP_408484.1| hypothetical protein AN4347.2 [Aspe... 35 1.3
gi|47834228|gb|AAT38836.1| PrtF2 [Streptococcus pyogenes] 35 1.3
gi|34305617|gb|AAQ63615.1| anthocyanidin 3-O-glucoside-6''-O-mal... 34 1.8
gi|14278178|pdb|1G5V|A Chain A, Solution Structure Of The Tudor ... 34 1.8
gi|48839220|ref|ZP_00296154.1| COG0065: 3-isopropylmalate dehydr... 34 2.3
gi|50287045|ref|XP_445952.1| unnamed protein product [Candida gl... 33 3.9
gi|45509282|ref|ZP_00161617.1| COG0642: Signal transduction hist... 33 5.1
gi|29726468|pdb|1MHN|A Chain A, High Resolution Crystal Structur... 33 5.1
gi|50551979|ref|XP_503464.1| hypothetical protein [Yarrowia lipo... 32 6.7
gi|28868414|ref|NP_791033.1| lipoprotein, putative [Pseudomonas ... 32 6.7
gi|17228069|ref|NP_484617.1| cyanophycin synthetase [Nostoc sp. ... 32 8.7
gi|25027856|ref|NP_737910.1| putative molybdopterin biosynthesis... 32 8.7
gi|28829080|gb|AAO51644.1| similar to Dictyostelium discoideum (... 32 8.7
>gi|7497297|pir||T19892 hypothetical protein C41G7.1 -
Caenorhabditis elegans
gi|3874905|emb|CAB02838.1| Hypothetical protein C41G7.1a
[Caenorhabditis elegans]
gi|4753664|emb|CAB41945.1| SMN protein [Caenorhabditis elegans]
Length = 197
Score = 372 bits (956), Expect = e-102
Identities = 187/197 (94%), Positives = 187/197 (94%)
Frame = -1
Query: 594 MEVDDVWDDTELIKMYDESLQEISKNETSAKITSRKFKGEDGKMYTWKVGGKCMAPYEEN 415
MEVDDVWDDTELIKMYDESLQEISKNETSAKITSRKFKGEDGKMYTWKVGGKCMAPYEEN
Sbjct: 1 MEVDDVWDDTELIKMYDESLQEISKNETSAKITSRKFKGEDGKMYTWKVGGKCMAPYEEN 60
Query: 414 GEVTDYPATIDTIGGADNLEVGVTFIYYGGQAVVQMKDLWLNEEAIADAVKAENDLQKTK 235
GEVTDYPATIDTIGGADNLEVGVTFIYYGGQAVVQMKDLWLNEEAIADAVKAENDLQKTK
Sbjct: 61 GEVTDYPATIDTIGGADNLEVGVTFIYYGGQAVVQMKDLWLNEEAIADAVKAENDLQKTK 120
Query: 234 KTSTVNSVAHSNSKSTSSAPNTSMXXXXXXXXXXPNIIAMAPVNQKEAMNSMLMSWYMSG 55
KTSTVNSVAHSNSKSTSSAPNTSM PNIIAMAPVNQKEAMNSMLMSWYMSG
Sbjct: 121 KTSTVNSVAHSNSKSTSSAPNTSMPFPSFAPPVPPNIIAMAPVNQKEAMNSMLMSWYMSG 180
Query: 54 YHTGYYQALADQKNVQN 4
YHTGYYQALADQKNVQN
Sbjct: 181 YHTGYYQALADQKNVQN 197
>gi|17505971|ref|NP_492525.1| human Survival Motor Neuron gene
homolog (22.9 kD) (smn-1) [Caenorhabditis elegans]
gi|6002908|gb|AAF00192.1| survival motor neuron protein
[Caenorhabditis elegans]
gi|14530375|emb|CAC42273.1| Hypothetical protein C41G7.1b
[Caenorhabditis elegans]
Length = 207
Score = 372 bits (956), Expect = e-102
Identities = 187/197 (94%), Positives = 187/197 (94%)
Frame = -1
Query: 594 MEVDDVWDDTELIKMYDESLQEISKNETSAKITSRKFKGEDGKMYTWKVGGKCMAPYEEN 415
MEVDDVWDDTELIKMYDESLQEISKNETSAKITSRKFKGEDGKMYTWKVGGKCMAPYEEN
Sbjct: 11 MEVDDVWDDTELIKMYDESLQEISKNETSAKITSRKFKGEDGKMYTWKVGGKCMAPYEEN 70
Query: 414 GEVTDYPATIDTIGGADNLEVGVTFIYYGGQAVVQMKDLWLNEEAIADAVKAENDLQKTK 235
GEVTDYPATIDTIGGADNLEVGVTFIYYGGQAVVQMKDLWLNEEAIADAVKAENDLQKTK
Sbjct: 71 GEVTDYPATIDTIGGADNLEVGVTFIYYGGQAVVQMKDLWLNEEAIADAVKAENDLQKTK 130
Query: 234 KTSTVNSVAHSNSKSTSSAPNTSMXXXXXXXXXXPNIIAMAPVNQKEAMNSMLMSWYMSG 55
KTSTVNSVAHSNSKSTSSAPNTSM PNIIAMAPVNQKEAMNSMLMSWYMSG
Sbjct: 131 KTSTVNSVAHSNSKSTSSAPNTSMPFPSFAPPVPPNIIAMAPVNQKEAMNSMLMSWYMSG 190
Query: 54 YHTGYYQALADQKNVQN 4
YHTGYYQALADQKNVQN
Sbjct: 191 YHTGYYQALADQKNVQN 207