BLASTX 2.2.4 [Aug-26-2002]
Query= C44C10_10
         (645 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17551012|ref|NP_509961.1| COLlagen structural gene (24.5 kD) ...   382   e-105
gi|39588095|emb|CAE57327.1| Hypothetical protein CBG00253 [Caeno...   357   1e-97
gi|50257118|gb|EAL19833.1| hypothetical protein CNBG1260 [Crypto...    34   2.1
gi|32410535|ref|XP_325748.1| hypothetical protein [Neurospora cr...    34   2.1
gi|30696564|ref|NP_851194.1| SWAP (Suppressor-of-White-APricot)/...    34   2.8
gi|9758107|dbj|BAB08579.1| unnamed protein product [Arabidopsis ...    34   2.8
gi|18423709|ref|NP_568820.1| SWAP (Suppressor-of-White-APricot)/...    34   2.8
gi|50731399|ref|XP_417257.1| PREDICTED: similar to mKIAA0337 pro...    33   3.6
gi|42519566|ref|NP_965496.1| hypothetical protein LJ1689 [Lactob...    33   6.2
gi|34868017|ref|XP_221568.2| similar to CG14796-PA [Rattus norve...    33   6.2
gi|39937444|ref|NP_949720.1| hypothetical protein RPA4384 [Rhodo...    33   6.2
gi|24581877|ref|NP_723064.1| CG31916-PA [Drosophila melanogaster...    33   6.2
gi|50759319|ref|XP_417618.1| PREDICTED: similar to Msx-2 interac...    33   6.2


>gi|17551012|ref|NP_509961.1| COLlagen structural gene (24.5 kD)
           (col-180Co) [Caenorhabditis elegans]
 gi|7497400|pir||T19930 hypothetical protein C44C10.9 -
           Caenorhabditis elegans
 gi|3874985|emb|CAA93643.1| Hypothetical protein C44C10.9
           [Caenorhabditis elegans]
          Length = 214

 Score =  382 bits (981), Expect = e-105
 Identities = 187/214 (87%), Positives = 187/214 (87%)
 Frame = -1

Query: 645 MEIALQGDSKGILYEGYTKAFKQCIFEEGDVEGKNERYEFRCDYDLECCGRTCCIPQATT 466
           MEIALQGDSKGILYEGYTKAFKQCIFEEGDVEGKNERYEFRCDYDLECCGRTCCIPQATT
Sbjct: 1   MEIALQGDSKGILYEGYTKAFKQCIFEEGDVEGKNERYEFRCDYDLECCGRTCCIPQATT 60

Query: 465 IPFWXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSRPKKEKFIPSPMQETTLMMPKPVQIT 286
           IPFW                           LKSRPKKEKFIPSPMQETTLMMPKPVQIT
Sbjct: 61  IPFWLMLILIALAIFLIALLLACLAYYLAKYLKSRPKKEKFIPSPMQETTLMMPKPVQIT 120

Query: 285 QRNEDEISRASVAQHVEPAPLSPQRAHNAFYRPFVADDVDDRDMPAPLRGSISYHSVNEL 106
           QRNEDEISRASVAQHVEPAPLSPQRAHNAFYRPFVADDVDDRDMPAPLRGSISYHSVNEL
Sbjct: 121 QRNEDEISRASVAQHVEPAPLSPQRAHNAFYRPFVADDVDDRDMPAPLRGSISYHSVNEL 180

Query: 105 TNSQFGTIKTIEKPKDRSSERMYKRPGFDNVPSY 4
           TNSQFGTIKTIEKPKDRSSERMYKRPGFDNVPSY
Sbjct: 181 TNSQFGTIKTIEKPKDRSSERMYKRPGFDNVPSY 214

[DB home][top]