Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C48B4_13
(491 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17552668|ref|NP_499121.1| putative protein (20.3 kD) (3K687) ... 245 3e-64
gi|17552666|ref|NP_499122.1| putative protein (3K687) [Caenorhab... 234 4e-61
gi|39590783|emb|CAE65156.1| Hypothetical protein CBG10024 [Caeno... 124 6e-28
gi|630667|pir||S40973 hypothetical protein F58A4.1 - Caenorhabdi... 53 2e-06
gi|39590784|emb|CAE65157.1| Hypothetical protein CBG10025 [Caeno... 51 1e-05
gi|17553732|ref|NP_499123.1| putative secreted or extracellular ... 48 7e-05
gi|23613760|ref|NP_704781.1| hypothetical protein [Plasmodium fa... 36 0.29
gi|23510201|ref|NP_702867.1| erythrocyte membrane-associated ant... 35 0.84
gi|49237340|ref|YP_031621.1| unknown [Frog virus 3] >gnl|BL_ORD_... 34 1.1
gi|23613415|ref|NP_703259.1| asparagine-rich antigen Pfa35-2 [Pl... 34 1.1
gi|323103|pir||C45600 asparagine-rich blood stage antigen (clone... 33 1.9
gi|9626618|ref|NP_040907.1| putative E4 ORF~no ATG [Human papill... 33 2.4
gi|23619456|ref|NP_705418.1| hypothetical protein [Plasmodium fa... 33 3.2
gi|42403575|ref|NP_963849.1| four and a half LIM domains 2 isofo... 32 4.2
gi|42403585|ref|NP_001441.3| four and a half LIM domains 2 isofo... 32 4.2
gi|2497681|sp|Q14192|SLI3_HUMAN Skeletal muscle LIM-protein 3 (S... 32 4.2
gi|30584155|gb|AAP36326.1| Homo sapiens four and a half LIM doma... 32 4.2
gi|42403570|ref|NP_963851.1| four and a half LIM domains 2 isofo... 32 4.2
gi|9626602|ref|NP_040893.1| putative E4 ORF [Human papillomaviru... 32 4.2
gi|47214507|emb|CAG00931.1| unnamed protein product [Tetraodon n... 32 5.4
gi|47216011|emb|CAF96259.1| unnamed protein product [Tetraodon n... 32 5.4
gi|27379017|ref|NP_770546.1| biopolymer transport protein [Brady... 32 5.4
gi|642524|gb|AAA61907.1| glutamyl tRNA synthetase 32 5.4
gi|21911443|ref|NP_665671.1| coat protein [Hollyhock leaf crumpl... 32 7.1
gi|4102698|gb|AAD01546.1| coat protein [Hollyhock leaf crumple v... 32 7.1
gi|26248804|ref|NP_754844.1| Putative PTS system IIBC component ... 32 7.1
gi|15802960|ref|NP_288990.1| putative PTS enzyme II [Escherichia... 32 7.1
gi|24113771|ref|NP_708281.1| putative PTS enzyme II [Shigella fl... 31 9.3
gi|16130354|ref|NP_416924.1| putative PTS enzyme IIBC component;... 31 9.3
gi|23479614|gb|EAA16395.1| hypothetical protein [Plasmodium yoel... 31 9.3
>gi|17552668|ref|NP_499121.1| putative protein (20.3 kD) (3K687)
[Caenorhabditis elegans]
gi|3875026|emb|CAA82385.1| Hypothetical protein C48B4.12b
[Caenorhabditis elegans]
gi|3877831|emb|CAA80172.1| Hypothetical protein C48B4.12b
[Caenorhabditis elegans]
Length = 193
Score = 245 bits (625), Expect = 3e-64
Identities = 120/163 (73%), Positives = 120/163 (73%)
Frame = +1
Query: 1 MRHLILLLVTISMVSAMGYIGVLKGNRGSPKKPTGDWPSRFPQHPAGFSYKCKNRQFETS 180
MRHLILLLVTISMVSAMGYIGVLKGNRGSPKKPTGDWPSRFPQHPAGFSYKCKNRQFETS
Sbjct: 1 MRHLILLLVTISMVSAMGYIGVLKGNRGSPKKPTGDWPSRFPQHPAGFSYKCKNRQFETS 60
Query: 181 GPSQNQPPIGNDGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFW 360
GPSQNQPPIGNDGEE FW
Sbjct: 61 GPSQNQPPIGNDGEETPKPTPKPTTTTTVKPTSPTTLKMTSPTTTTKKPAPAAPTATTFW 120
Query: 361 IRSPTPPNTPAPVVKGGAAYTLGHPQFATVKPVSVFAPDAALH 489
IRSPTPPNTPAPVVKGGAAYTLGHPQFATVKPVSVFAPDAALH
Sbjct: 121 IRSPTPPNTPAPVVKGGAAYTLGHPQFATVKPVSVFAPDAALH 163