Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C48B4_14
(482 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17552666|ref|NP_499122.1| putative protein (3K687) [Caenorhab... 240 9e-63
gi|17552668|ref|NP_499121.1| putative protein (20.3 kD) (3K687) ... 234 4e-61
gi|39590783|emb|CAE65156.1| Hypothetical protein CBG10024 [Caeno... 124 6e-28
gi|39590784|emb|CAE65157.1| Hypothetical protein CBG10025 [Caeno... 53 2e-06
gi|630667|pir||S40973 hypothetical protein F58A4.1 - Caenorhabdi... 53 2e-06
gi|17553732|ref|NP_499123.1| putative secreted or extracellular ... 52 5e-06
gi|23613760|ref|NP_704781.1| hypothetical protein [Plasmodium fa... 36 0.27
gi|9626618|ref|NP_040907.1| putative E4 ORF~no ATG [Human papill... 35 0.46
gi|23510201|ref|NP_702867.1| erythrocyte membrane-associated ant... 35 0.78
gi|9626602|ref|NP_040893.1| putative E4 ORF [Human papillomaviru... 35 0.78
gi|23613415|ref|NP_703259.1| asparagine-rich antigen Pfa35-2 [Pl... 34 1.0
gi|49237340|ref|YP_031621.1| unknown [Frog virus 3] >gnl|BL_ORD_... 34 1.0
gi|1754949|gb|AAB39460.1| envelope glycoprotein, v1-v5 region 33 1.7
gi|323103|pir||C45600 asparagine-rich blood stage antigen (clone... 33 1.7
gi|23619456|ref|NP_705418.1| hypothetical protein [Plasmodium fa... 33 3.0
gi|42403585|ref|NP_001441.3| four and a half LIM domains 2 isofo... 32 3.9
gi|42403575|ref|NP_963849.1| four and a half LIM domains 2 isofo... 32 3.9
gi|2497681|sp|Q14192|SLI3_HUMAN Skeletal muscle LIM-protein 3 (S... 32 3.9
gi|30584155|gb|AAP36326.1| Homo sapiens four and a half LIM doma... 32 3.9
gi|42403570|ref|NP_963851.1| four and a half LIM domains 2 isofo... 32 3.9
gi|47214507|emb|CAG00931.1| unnamed protein product [Tetraodon n... 32 5.1
gi|47216011|emb|CAF96259.1| unnamed protein product [Tetraodon n... 32 5.1
gi|27379017|ref|NP_770546.1| biopolymer transport protein [Brady... 32 5.1
gi|21911443|ref|NP_665671.1| coat protein [Hollyhock leaf crumpl... 32 6.6
gi|4102698|gb|AAD01546.1| coat protein [Hollyhock leaf crumple v... 32 6.6
gi|26248804|ref|NP_754844.1| Putative PTS system IIBC component ... 32 6.6
gi|15802960|ref|NP_288990.1| putative PTS enzyme II [Escherichia... 32 6.6
gi|419402|pir||B46315 E4 protein - human papillomavirus type 4 >... 32 6.6
gi|23479614|gb|EAA16395.1| hypothetical protein [Plasmodium yoel... 31 8.7
gi|39584975|emb|CAE64399.1| Hypothetical protein CBG09090 [Caeno... 31 8.7
gi|24113771|ref|NP_708281.1| putative PTS enzyme II [Shigella fl... 31 8.7
gi|16130354|ref|NP_416924.1| putative PTS enzyme IIBC component;... 31 8.7
>gi|17552666|ref|NP_499122.1| putative protein (3K687)
[Caenorhabditis elegans]
gi|25395927|pir||C88560 protein C48B4.12a [imported] -
Caenorhabditis elegans
gi|3875027|emb|CAA82386.1| Hypothetical protein C48B4.12a
[Caenorhabditis elegans]
gi|3877832|emb|CAA80173.1| Hypothetical protein C48B4.12a
[Caenorhabditis elegans]
Length = 190
Score = 240 bits (612), Expect = 9e-63
Identities = 117/160 (73%), Positives = 117/160 (73%)
Frame = +1
Query: 1 MRHLILLLVTISMVSAMGYIGGNRGSPKKPTGDWPSRFPQHPAGFSYKCKNRQFETSGPS 180
MRHLILLLVTISMVSAMGYIGGNRGSPKKPTGDWPSRFPQHPAGFSYKCKNRQFETSGPS
Sbjct: 1 MRHLILLLVTISMVSAMGYIGGNRGSPKKPTGDWPSRFPQHPAGFSYKCKNRQFETSGPS 60
Query: 181 QNQPPIGNDGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFWIRS 360
QNQPPIGNDGEE FWIRS
Sbjct: 61 QNQPPIGNDGEETPKPTPKPTTTTTVKPTSPTTLKMTSPTTTTKKPAPAAPTATTFWIRS 120
Query: 361 PTPPNTPAPVVKGGAAYTLGHPQFATVKPVSVFAPDAALH 480
PTPPNTPAPVVKGGAAYTLGHPQFATVKPVSVFAPDAALH
Sbjct: 121 PTPPNTPAPVVKGGAAYTLGHPQFATVKPVSVFAPDAALH 160