BLASTX 2.2.4 [Aug-26-2002] Query= C52E2_4 (903 letters) Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq 1,967,186 sequences; 661,712,633 total letters Score E Sequences producing significant alignments: (bits) Value gi|17532545|ref|NP_494094.1| cyclin-like F-box family member (2C... 600 e-170 gi|17532533|ref|NP_494097.1| cyclin-like F-box family member (2C... 288 2e-76 gi|32565225|ref|NP_494093.2| putative cytoplasmic protein family... 263 5e-69 gi|49035188|gb|AAK67220.3| Hypothetical protein C52E2.6 [Caenorh... 253 4e-66 gi|7511050|pir||T32417 hypothetical protein ZK250.6 - Caenorhabd... 220 3e-56 gi|17537845|ref|NP_494136.1| predicted CDS, Meprin/TRAF-like MAT... 220 3e-56 gi|17531811|ref|NP_494100.1| predicted CDS, cyclin-like F-box fa... 213 4e-54 gi|17510373|ref|NP_493458.1| cyclin-like F-box family member (1O... 176 5e-43 gi|17510369|ref|NP_493456.1| cyclin-like F-box family member (1O... 176 8e-43 gi|17555104|ref|NP_497155.1| cyclin-like F-box family member (3A... 83 7e-15 gi|17510357|ref|NP_493459.1| predicted CDS, cyclin-like F-box fa... 76 9e-13 gi|17561462|ref|NP_507756.1| predicted CDS, cyclin-like F-box fa... 76 1e-12 gi|17555320|ref|NP_499788.1| cyclin-like F-box family member (3O... 72 1e-11 gi|17537759|ref|NP_494024.1| cyclin-like F-box family member (2B... 72 2e-11 gi|17555108|ref|NP_497157.1| very Early Transcript VET-3, cyclin... 68 3e-10 gi|17510355|ref|NP_493460.1| cyclin-like F-box family member (1O... 67 5e-10 gi|17536893|ref|NP_494653.1| predicted CDS, cyclin-like F-box fa... 67 7e-10 gi|17541840|ref|NP_500565.1| cyclin-like F-box family member (4F... 65 3e-09 gi|7506472|pir||T29660 hypothetical protein R08C7.9 - Caenorhabd... 64 6e-09 gi|17550770|ref|NP_510808.1| cyclin-like F-box family member (XR... 64 6e-09 gi|29570440|gb|AAO91704.1| Hypothetical protein R08C7.13 [Caenor... 63 8e-09 gi|17534271|ref|NP_494693.1| cyclin-like F-box family member (2E... 63 1e-08 gi|17555102|ref|NP_497154.1| cyclin-like F-box family member (3A... 63 1e-08 gi|17533147|ref|NP_494640.1| short-chain dehydrogenase family me... 62 2e-08 gi|17561952|ref|NP_503305.1| cyclin-like F-box family member (5B... 62 2e-08 gi|17554632|ref|NP_499389.1| cyclin-like F-box family member (3L... 61 3e-08 gi|17552604|ref|NP_499398.1| cyclin-like F-box family member (3L... 60 9e-08 gi|17532977|ref|NP_494357.1| cyclin-like F-box family member (2D... 55 2e-06 gi|17534511|ref|NP_494041.1| predicted CDS, cyclin-like F-box fa... 55 3e-06 gi|17556284|ref|NP_499547.1| predicted CDS, cyclin-like F-box fa... 55 3e-06 gi|7507908|pir||T33429 hypothetical protein T17A3.6 - Caenorhabd... 55 3e-06 gi|7496931|pir||T15749 hypothetical protein C33F10.8 - Caenorhab... 55 3e-06 gi|17555106|ref|NP_497156.1| putative cytoplasmic protein family... 55 3e-06 gi|25153988|ref|NP_740980.1| cyclin-like F-box family member (42... 55 3e-06 gi|17536311|ref|NP_494178.1| predicted CDS, cyclin-like F-box fa... 54 6e-06 gi|17534091|ref|NP_493878.1| cyclin-like F-box family member (2B... 53 8e-06 gi|17561468|ref|NP_507759.1| predicted CDS, cyclin-like F-box fa... 53 1e-05 gi|17536783|ref|NP_493764.1| predicted CDS, cyclin-like F-box fa... 53 1e-05 gi|37859213|gb|AAF39821.2| Hypothetical protein F45D11.13 [Caeno... 52 1e-05 gi|17541590|ref|NP_501431.1| cyclin-like F-box family member (4J... 52 2e-05 gi|17568467|ref|NP_508301.1| predicted CDS, putative protein fam... 52 2e-05 gi|17531651|ref|NP_494079.1| cyclin-like F-box family member (2C... 52 2e-05 gi|17507459|ref|NP_493499.1| cyclin-like F-box family member (1O... 51 4e-05 gi|7503792|pir||T22401 hypothetical protein F49B2.1 - Caenorhabd... 51 4e-05 gi|17534923|ref|NP_493995.1| cyclin-like F-box family member (2B... 51 4e-05 gi|17534099|ref|NP_493881.1| putative protein family member (2B2... 50 7e-05 gi|17532265|ref|NP_494204.1| cyclin-like F-box family member (2C... 50 9e-05 gi|17532979|ref|NP_494358.1| predicted CDS, cyclin-like F-box fa... 49 1e-04 gi|17537289|ref|NP_494560.1| predicted CDS, cyclin-like F-box fa... 49 1e-04 gi|17509951|ref|NP_493362.1| cyclin-like F-box family member (1O... 49 1e-04 gi|17534513|ref|NP_494042.1| cyclin-like F-box family member (2B... 49 1e-04 gi|17561456|ref|NP_507753.1| cyclin-like F-box family member (5T... 49 2e-04 gi|17534505|ref|NP_494036.1| cyclin-like F-box family member (2B... 49 2e-04 gi|32564823|ref|NP_493891.2| Meprin/TRAF-like MATH family member... 49 2e-04 gi|25395396|pir||B88035 protein M01D1.2 [imported] - Caenorhabdi... 49 2e-04 gi|17533767|ref|NP_494067.1| cyclin-like F-box family member (2C... 49 2e-04 gi|38176033|gb|AAB70998.3| Hypothetical protein M01D1.2 [Caenorh... 49 2e-04 gi|7497305|pir||T32324 hypothetical protein C41H7.2 - Caenorhabd... 48 3e-04 gi|17532983|ref|NP_494360.1| cyclin-like F-box family member (2D... 48 3e-04 gi|32565853|ref|NP_872062.1| predicted CDS, putative cytoplasmic... 48 3e-04 gi|7498363|pir||T32607 hypothetical protein E04A4.1 - Caenorhabd... 48 3e-04 gi|17532913|ref|NP_494167.1| cyclin-like F-box family member (36... 47 6e-04 gi|32566327|ref|NP_500625.2| predicted CDS, cyclin-like F-box fa... 47 6e-04 gi|17537755|ref|NP_494026.1| cyclin-like F-box family member (2B... 47 8e-04 gi|7505154|pir||T32391 hypothetical protein K02E7.5 - Caenorhabd... 46 0.001 gi|17537761|ref|NP_494025.1| cyclin-like F-box family member (2B... 46 0.001 gi|7498624|pir||T25674 hypothetical protein F08D12.6 - Caenorhab... 46 0.001 gi|17564740|ref|NP_507740.1| cyclin-like F-box family member (5T... 46 0.001 gi|17532973|ref|NP_494355.1| predicted CDS, cyclin-like F-box fa... 46 0.001 gi|17536137|ref|NP_494083.1| predicted CDS, cyclin-like F-box fa... 45 0.002 gi|17564748|ref|NP_507736.1| acyltransferase 3 family (5T697) [C... 45 0.002 gi|17564736|ref|NP_507742.1| cyclin-like F-box family member (5T... 45 0.003 gi|17535155|ref|NP_493897.1| cyclin-like F-box family member (2B... 44 0.004 gi|17534501|ref|NP_494039.1| cyclin-like F-box family member (2B... 44 0.004 gi|17558582|ref|NP_507766.1| cyclin-like F-box family member (5T... 44 0.004 gi|17534919|ref|NP_493991.1| predicted CDS, serum paraoxonase ar... 44 0.004 gi|17533549|ref|NP_494354.1| cyclin-like F-box family member (2D... 44 0.005 gi|17507461|ref|NP_493498.1| cyclin-like F-box family member (1O... 44 0.006 gi|7497385|pir||T19919 hypothetical protein C44B9.5 - Caenorhabd... 43 0.008 gi|17567597|ref|NP_508559.1| cyclin-like F-box family member (XD... 43 0.011 gi|17540942|ref|NP_502146.1| predicted CDS, cyclin-like F-box fa... 43 0.011 gi|17566476|ref|NP_507899.1| cyclin-like F-box family member (5U... 42 0.014 gi|17532981|ref|NP_494359.1| cyclin-like F-box family member (2D... 42 0.014 gi|17543002|ref|NP_500634.1| cyclin-like F-box family member (4F... 42 0.014 gi|17539858|ref|NP_500533.1| putative protein family member (4F5... 42 0.019 gi|17561450|ref|NP_507750.1| cyclin-like F-box family member (5T... 42 0.019 gi|17556272|ref|NP_499540.1| cyclin-like F-box family member (3M... 42 0.019 gi|17534523|ref|NP_494048.1| cyclin-like F-box family member (2B... 41 0.032 gi|17537757|ref|NP_494023.1| predicted CDS, cyclin-like F-box fa... 41 0.042 gi|17556282|ref|NP_499546.1| cyclin-like F-box family member (3M... 41 0.042 gi|17565318|ref|NP_507398.1| predicted CDS, putative protein fam... 40 0.055 gi|29570442|gb|AAO91706.1| Hypothetical protein R08C7.9 [Caenorh... 40 0.055 gi|7505335|pir||T32848 hypothetical protein K05F6.7 - Caenorhabd... 40 0.071 gi|17533773|ref|NP_494069.1| cyclin-like F-box family member (2C... 39 0.12 gi|17539594|ref|NP_500624.1| predicted CDS, putative cytoplasmic... 39 0.16 gi|7498705|pir||T20640 hypothetical protein F09C3.3 - Caenorhabd... 39 0.16 gi|17506553|ref|NP_493495.1| predicted CDS, cyclin-like F-box fa... 39 0.16 gi|17534055|ref|NP_494058.1| cyclin-like F-box family member (2C... 39 0.21 gi|17511127|ref|NP_493609.1| putative mitochondrial protein fami... 39 0.21 gi|17534911|ref|NP_493998.1| predicted CDS, putative cytoplasmic... 38 0.27 gi|17540100|ref|NP_500515.1| predicted CDS, transposase (4E982) ... 38 0.27 gi|39581936|emb|CAE72898.1| Hypothetical protein CBG20212 [Caeno... 38 0.35 gi|17541606|ref|NP_502237.1| cyclin-like F-box family member (4M... 38 0.35 gi|17535231|ref|NP_494601.1| predicted CDS, putative protein fam... 38 0.35 gi|17561464|ref|NP_507757.1| predicted CDS, attractin like famil... 37 0.46 gi|17541818|ref|NP_502100.1| putative cytoplasmic protein family... 37 0.46 gi|17558588|ref|NP_507762.1| serpentine Receptor, class H (srh-2... 37 0.60 gi|17561470|ref|NP_507760.1| cyclin-like F-box family member (5T... 37 0.60 gi|38174876|emb|CAE53731.1| Hypothetical protein C43D7.9 [Caenor... 37 0.60 gi|28828088|gb|AAO50771.1| similar to Derepression of GCN4 expre... 37 0.79 gi|7510650|pir||T25956 hypothetical protein ZC204.7 - Caenorhabd... 37 0.79 gi|42733956|gb|AAS38858.1| similar to Derepression of GCN4 expre... 37 0.79 gi|50507808|emb|CAB04476.2| Hypothetical protein F55C9.11 [Caeno... 37 0.79 gi|17533763|ref|NP_494071.1| predicted CDS, cyclin-like F-box fa... 36 1.0 gi|17535149|ref|NP_493895.1| cyclin-like F-box family member (2B... 36 1.0 gi|39587416|emb|CAE75070.1| Hypothetical protein CBG22986 [Caeno... 36 1.0 gi|23618975|ref|NP_704937.1| hypothetical protein [Plasmodium fa... 36 1.3 gi|17537295|ref|NP_494557.1| putative protein family member (2D7... 36 1.3 gi|17564738|ref|NP_507741.1| cyclin-like F-box family member (5T... 36 1.3 gi|49035103|gb|AAB66212.2| Hypothetical protein F45C12.14 [Caeno... 35 1.8 gi|17538558|ref|NP_502092.1| cyclin-like F-box family member (4L... 35 1.8 gi|17534073|ref|NP_494056.1| predicted CDS, cyclin-like F-box fa... 35 1.8 gi|17535153|ref|NP_493899.1| cyclin-like F-box family member (2B... 35 2.3 gi|17534915|ref|NP_493994.1| predicted CDS, putative cytoplasmic... 35 2.3 gi|39581934|emb|CAE72896.1| Hypothetical protein CBG20210 [Caeno... 35 3.0 gi|23479270|gb|EAA16145.1| hypothetical protein [Plasmodium yoel... 34 3.9 gi|17534097|ref|NP_493880.1| predicted CDS, cyclin-like F-box fa... 34 3.9 gi|39585523|emb|CAE65283.1| Hypothetical protein CBG10183 [Caeno... 34 3.9 gi|23003457|ref|ZP_00047119.1| COG1230: Co/Zn/Cd efflux system c... 34 5.1 gi|14193306|gb|AAK55890.1| ATP synthase gamma subunit [Candidatu... 34 5.1 gi|46227471|gb|EAK88406.1| large protein with a SPRY domain and ... 33 6.7 gi|25573212|gb|AAN75180.1| STE11 [Cryptococcus neoformans var. g... 33 6.7 gi|15792159|ref|NP_281982.1| UDP-N-acetylglucosamine pyrophospho... 33 6.7 gi|17558592|ref|NP_507761.1| cyclin-like F-box family member (5T... 33 8.7 >gi|17532545|ref|NP_494094.1| cyclin-like F-box family member (2C124) [Caenorhabditis elegans] gi|14550359|gb|AAK67221.1| Hypothetical protein C52E2.7 [Caenorhabditis elegans] Length = 300 Score = 600 bits (1548), Expect = e-170 Identities = 300/300 (100%), Positives = 300/300 (100%) Frame = -1 Query: 903 MSAPSFPILRLPSKALHATLQTFDFVDLMSFSLISPTSVRPLNTGAASVYVILDNVITIV 724 MSAPSFPILRLPSKALHATLQTFDFVDLMSFSLISPTSVRPLNTGAASVYVILDNVITIV Sbjct: 1 MSAPSFPILRLPSKALHATLQTFDFVDLMSFSLISPTSVRPLNTGAASVYVILDNVITIV 60 Query: 723 AGFVIFYLNPPSDQIDRIKVFPQCRWLNESFSVKKCVENLLVALDLQEVEKLVISKEHVD 544 AGFVIFYLNPPSDQIDRIKVFPQCRWLNESFSVKKCVENLLVALDLQEVEKLVISKEHVD Sbjct: 61 AGFVIFYLNPPSDQIDRIKVFPQCRWLNESFSVKKCVENLLVALDLQEVEKLVISKEHVD 120 Query: 543 CDELKGFKFKMITMNVKNLKMFDLYYRDAKEISIADRAIFGEQSRALFSENLDCLEFLAE 364 CDELKGFKFKMITMNVKNLKMFDLYYRDAKEISIADRAIFGEQSRALFSENLDCLEFLAE Sbjct: 121 CDELKGFKFKMITMNVKNLKMFDLYYRDAKEISIADRAIFGEQSRALFSENLDCLEFLAE 180 Query: 363 CVIGLDDIIASNAIKTNIARPFSFSNLNLFLRHFINGSNPSLKEMNIAMEEGTFENYEKV 184 CVIGLDDIIASNAIKTNIARPFSFSNLNLFLRHFINGSNPSLKEMNIAMEEGTFENYEKV Sbjct: 181 CVIGLDDIIASNAIKTNIARPFSFSNLNLFLRHFINGSNPSLKEMNIAMEEGTFENYEKV 240 Query: 183 LLNGINYRTSNFSRIYADGSSSNGLEFQQNDRTNVIVFVDPIRRWFYLTTYSFSHHCSCT 4 LLNGINYRTSNFSRIYADGSSSNGLEFQQNDRTNVIVFVDPIRRWFYLTTYSFSHHCSCT Sbjct: 241 LLNGINYRTSNFSRIYADGSSSNGLEFQQNDRTNVIVFVDPIRRWFYLTTYSFSHHCSCT 300