Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C54C8_5
(1200 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17506201|ref|NP_493159.1| putative membrane protein family me... 830 0.0
gi|37859216|gb|AAC78192.2| Hypothetical protein F46F5.14 [Caenor... 304 3e-81
gi|17534167|ref|NP_493813.1| putative protein family member (2B9... 299 8e-80
gi|17566984|ref|NP_504676.1| putative protein family member (5H7... 294 3e-78
gi|17507301|ref|NP_493100.1| predicted CDS, putative protein fam... 289 8e-77
gi|17560400|ref|NP_503294.1| putative Golgi protein family membe... 284 3e-75
gi|39594333|emb|CAE71911.1| Hypothetical protein CBG18973 [Caeno... 280 6e-74
gi|17534147|ref|NP_493815.1| putative protein family member (2B9... 277 3e-73
gi|17566988|ref|NP_504674.1| predicted CDS, putative protein fam... 274 3e-72
gi|39594334|emb|CAE71912.1| Hypothetical protein CBG18974 [Caeno... 267 4e-70
gi|17564714|ref|NP_506937.1| predicted CDS, putative cytoplasmic... 253 8e-66
gi|39593604|emb|CAE61896.1| Hypothetical protein CBG05887 [Caeno... 251 2e-65
gi|39589766|emb|CAE67001.1| Hypothetical protein CBG12400 [Caeno... 233 7e-60
gi|39592614|emb|CAE62228.1| Hypothetical protein CBG06280 [Caeno... 190 7e-47
gi|39580807|emb|CAE58976.1| Hypothetical protein CBG02249 [Caeno... 155 1e-36
gi|39589774|emb|CAE67009.1| Hypothetical protein CBG12410 [Caeno... 147 5e-34
gi|17506811|ref|NP_492763.1| predicted CDS, putative protein fam... 145 1e-33
gi|34850012|gb|AAB52492.2| Hypothetical protein T08G2.2 [Caenorh... 145 2e-33
gi|17569723|ref|NP_510787.1| putative endoplasmic reticulum prot... 140 6e-32
gi|39596056|emb|CAE69692.1| Hypothetical protein CBG15947 [Caeno... 139 1e-31
gi|17507099|ref|NP_492418.1| predicted CDS, putative cytoplasmic... 137 7e-31
gi|30696017|ref|NP_199933.2| expressed protein [Arabidopsis thal... 36 1.6
gi|8843857|dbj|BAA97383.1| unnamed protein product [Arabidopsis ... 36 1.6
gi|15605499|ref|NP_220285.1| tRNA isopentenylpyrophosphate trans... 35 4.6
gi|11467958|sp|O84771|MIAA_CHLTR tRNA delta(2)-isopentenylpyroph... 35 4.6
gi|40556247|ref|NP_955332.1| CNPV309 ankyrin repeat protein [Can... 34 7.8
>gi|17506201|ref|NP_493159.1| putative membrane protein family member
(46.2 kD) (1N43) [Caenorhabditis elegans]
gi|7497898|pir||T20204 hypothetical protein C54C8.4 - Caenorhabditis
elegans
gi|3875215|emb|CAB05466.1| Hypothetical protein C54C8.4
[Caenorhabditis elegans]
Length = 399
Score = 830 bits (2144), Expect = 0.0
Identities = 399/399 (100%), Positives = 399/399 (100%)
Frame = +1
Query: 1 MSNPHCKLTIKLLLSCFVIYSTFSILNYLLFTGSNIKNLLNERRPQKYQPYPIIEAGGGL 180
MSNPHCKLTIKLLLSCFVIYSTFSILNYLLFTGSNIKNLLNERRPQKYQPYPIIEAGGGL
Sbjct: 1 MSNPHCKLTIKLLLSCFVIYSTFSILNYLLFTGSNIKNLLNERRPQKYQPYPIIEAGGGL 60
Query: 181 NISSENIAIVIILSKSHDRSYYQIAIDSVECYAKAHGYEFVLTNDSNFGCDHIKINIFRR 360
NISSENIAIVIILSKSHDRSYYQIAIDSVECYAKAHGYEFVLTNDSNFGCDHIKINIFRR
Sbjct: 61 NISSENIAIVIILSKSHDRSYYQIAIDSVECYAKAHGYEFVLTNDSNFGCDHIKINIFRR 120
Query: 361 HCVLAKILVDYEAVVHIDGDMGIVNPKRRIQEYMTESSDIVFYDRHFAPEVAMCYIVKNT 540
HCVLAKILVDYEAVVHIDGDMGIVNPKRRIQEYMTESSDIVFYDRHFAPEVAMCYIVKNT
Sbjct: 121 HCVLAKILVDYEAVVHIDGDMGIVNPKRRIQEYMTESSDIVFYDRHFAPEVAMCYIVKNT 180
Query: 541 EYAITLLNEFAEYERKLPNSSHGSENGALHIFLAEKLFPHNQIDIDVCRIAWENSWNIVD 720
EYAITLLNEFAEYERKLPNSSHGSENGALHIFLAEKLFPHNQIDIDVCRIAWENSWNIVD
Sbjct: 181 EYAITLLNEFAEYERKLPNSSHGSENGALHIFLAEKLFPHNQIDIDVCRIAWENSWNIVD 240
Query: 721 QFAYTHCIRAIFGASIDFDKIRILRKGTGFARDDWITGGVWSPERDFMLHGWKMRQLAPT 900
QFAYTHCIRAIFGASIDFDKIRILRKGTGFARDDWITGGVWSPERDFMLHGWKMRQLAPT
Sbjct: 241 QFAYTHCIRAIFGASIDFDKIRILRKGTGFARDDWITGGVWSPERDFMLHGWKMRQLAPT 300
Query: 901 PAGVVKAGAMSELIWYSPFLGSFDMEKCSMGNTTWYYNPSLIASRETVEVVLQQEDVISA 1080
PAGVVKAGAMSELIWYSPFLGSFDMEKCSMGNTTWYYNPSLIASRETVEVVLQQEDVISA
Sbjct: 301 PAGVVKAGAMSELIWYSPFLGSFDMEKCSMGNTTWYYNPSLIASRETVEVVLQQEDVISA 360
Query: 1081 ARKVNYFYRLYKVITNSFWWYIYQSHVWKSDYPLYFLNE 1197
ARKVNYFYRLYKVITNSFWWYIYQSHVWKSDYPLYFLNE
Sbjct: 361 ARKVNYFYRLYKVITNSFWWYIYQSHVWKSDYPLYFLNE 399