Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C54G4_2
(360 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17506219|ref|NP_492200.1| putative nuclear protein (13.7 kD) ... 242 1e-63
gi|25395317|pir||F87845 protein C54G4.5 [imported] - Caenorhabdi... 186 2e-61
gi|39582071|emb|CAE63714.1| Hypothetical protein CBG08235 [Caeno... 218 3e-56
gi|32417798|ref|XP_329377.1| predicted protein [Neurospora crass... 34 0.80
gi|48716486|dbj|BAD23092.1| putative DNA polymerase epsilon cata... 26 3.2
gi|45358296|ref|NP_987853.1| Putative membrane pump [Methanococc... 32 4.0
gi|26331846|dbj|BAC29653.1| unnamed protein product [Mus musculus] 32 4.0
gi|23510309|ref|NP_700469.1| RIKEN cDNA C130099A20 [Mus musculus... 32 4.0
gi|27721259|ref|XP_236554.1| similar to RIKEN cDNA C130099A20 [R... 32 4.0
gi|25407252|pir||E85049 probable transposon protein [imported] -... 32 4.0
gi|19074678|ref|NP_586184.1| ATP-DEPENDENT RNA HELICASE (DEAD bo... 31 5.2
gi|47497023|dbj|BAD19076.1| putative DEAD box-like RNA helicase ... 30 8.8
gi|33333921|gb|AAQ12059.1| NADH dehydrogenase subunit F [Eriocau... 30 8.8
>gi|17506219|ref|NP_492200.1| putative nuclear protein (13.7 kD)
(1I573) [Caenorhabditis elegans]
gi|7497950|pir||T20240 hypothetical protein C54G4.5 -
Caenorhabditis elegans
gi|5824414|emb|CAA99817.2| Hypothetical protein C54G4.5
[Caenorhabditis elegans]
Length = 119
Score = 242 bits (618), Expect = 1e-63
Identities = 119/119 (100%), Positives = 119/119 (100%)
Frame = +1
Query: 1 MHLQRPPSSFTTSTSAKPDVAWSSFLMVYSIPFILVLTVACIIKWRPMREFPNLRSFFSW 180
MHLQRPPSSFTTSTSAKPDVAWSSFLMVYSIPFILVLTVACIIKWRPMREFPNLRSFFSW
Sbjct: 1 MHLQRPPSSFTTSTSAKPDVAWSSFLMVYSIPFILVLTVACIIKWRPMREFPNLRSFFSW 60
Query: 181 YCSCSPKKVIQELEQPDRTHMIMSIDAQSLASMSSVIDSPLLVRRNEEESRKFESTAIP 357
YCSCSPKKVIQELEQPDRTHMIMSIDAQSLASMSSVIDSPLLVRRNEEESRKFESTAIP
Sbjct: 61 YCSCSPKKVIQELEQPDRTHMIMSIDAQSLASMSSVIDSPLLVRRNEEESRKFESTAIP 119