Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C55C3_4
(1557 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|25149377|ref|NP_500848.2| putative protein (58.3 kD) (4G462) ... 983 0.0
gi|39588313|emb|CAE72664.1| Hypothetical protein CBG19878 [Caeno... 893 0.0
gi|7497999|pir||T29188 hypothetical protein C55C3.5 - Caenorhabd... 727 0.0
gi|32566904|ref|NP_506424.2| putative protein (60.9 kD) (5O309) ... 45 0.004
gi|39590490|emb|CAE66230.1| Hypothetical protein CBG11473 [Caeno... 45 0.005
gi|50290605|ref|XP_447735.1| unnamed protein product [Candida gl... 39 0.45
gi|20093550|ref|NP_613397.1| Uncharacterized protein [Methanopyr... 38 0.76
gi|50304219|ref|XP_452059.1| unnamed protein product [Kluyveromy... 35 3.8
gi|7385125|gb|AAF61706.1| MAP kinase [Kluyveromyces lactis] 35 3.8
gi|42528018|ref|NP_973116.1| nucleotide-binding protein [Trepone... 35 4.9
gi|49067492|ref|XP_398036.1| hypothetical protein UM00421.1 [Ust... 35 6.4
gi|31127110|gb|AAH52900.1| Ptgs2 protein [Mus musculus] 35 6.4
gi|2780921|pdb|3PGH|A Chain A, Cyclooxygenase-2 (Prostaglandin S... 35 6.4
gi|31981525|ref|NP_035328.2| prostaglandin-endoperoxide synthase... 35 6.4
gi|200337|gb|AAA39924.1| prostaglandin synthase 35 6.4
gi|8569527|pdb|1DDX|A Chain A, Crystal Structure Of A Mixture Of... 35 6.4
gi|3914297|sp|O19183|PGH2_HORSE Prostaglandin G/H synthase 2 pre... 35 6.4
gi|8569524|pdb|1CVU|A Chain A, Crystal Structure Of Arachidonic ... 35 6.4
gi|477440|pir||A49010 prostaglandin-endoperoxide synthase (EC 1.... 35 6.4
gi|19072834|gb|AAK97783.1| prostaglandin G/H synthase-2 [Canis f... 35 6.4
gi|3914296|sp|O02768|PGH2_RABIT Prostaglandin G/H synthase 2 pre... 34 8.4
gi|4506265|ref|NP_000954.1| prostaglandin-endoperoxide synthase ... 34 8.4
gi|47523708|ref|NP_999486.1| prostaglandin G/H synthase-2 [Sus s... 34 8.4
gi|291988|gb|AAA35803.1| endoperoxide synthase type II 34 8.4
gi|476868|pir||A46150 prostaglandin-endoperoxide synthase (EC 1.... 34 8.4
>gi|25149377|ref|NP_500848.2| putative protein (58.3 kD) (4G462)
[Caenorhabditis elegans]
gi|16604128|gb|AAA96171.2| Hypothetical protein C55C3.5
[Caenorhabditis elegans]
Length = 518
Score = 983 bits (2541), Expect = 0.0
Identities = 496/506 (98%), Positives = 496/506 (98%)
Frame = -1
Query: 1557 MLKPFIIKCSIFLLLILCSVESSEFGVTLGDAAISQLIRHTASQFLEETRVADILLKSNE 1378
MLKPFIIKCSIFLLLILCSVESSEFGVTLGDAAISQLIRHTASQFLEETRVADILLKSNE
Sbjct: 1 MLKPFIIKCSIFLLLILCSVESSEFGVTLGDAAISQLIRHTASQFLEETRVADILLKSNE 60
Query: 1377 EPSFGSLAHLKLFNTVSYRNVSVQFRPKVVHVFFENLNVTSHANLSDVIWPIPFSDSLVD 1198
EPSFGSLAHLKLFNTVSYRNVSVQFRPKVVHVFFENLNVTSHANLSDVIWPIPFSDSLVD
Sbjct: 61 EPSFGSLAHLKLFNTVSYRNVSVQFRPKVVHVFFENLNVTSHANLSDVIWPIPFSDSLVD 120
Query: 1197 SHVKVPRGHLRFIVDDQKVTLSKCALFNPDIAFQLRDSWLINKGIXXXXXXXXXXFEGAL 1018
SHVKVPRGHLRFIVDDQKVTLSKCALFNPDIAFQLRDSWLINKGI FEGAL
Sbjct: 121 SHVKVPRGHLRFIVDDQKVTLSKCALFNPDIAFQLRDSWLINKGISAFSSMASSFFEGAL 180
Query: 1017 CSALSSSTNDLKHKAERKFPIYEFLPKKVQDHMAARNTTLFYRVNSINADDHQLTVRAQI 838
CSALSSSTNDLKHKAERKFPIYEFLPKKVQDHMAARNTTLFYRVNSINADDHQLTVRAQI
Sbjct: 181 CSALSSSTNDLKHKAERKFPIYEFLPKKVQDHMAARNTTLFYRVNSINADDHQLTVRAQI 240
Query: 837 EWQKLIPAANDEASNLLKGQEEHGNSTKLLDMEMKNGDLITVWLEDAILNEILDQIDWNF 658
EWQKLIPAANDEASNLLKGQEEHGNSTKLLDMEMKNGDLITVWLEDAILNEILDQIDWNF
Sbjct: 241 EWQKLIPAANDEASNLLKGQEEHGNSTKLLDMEMKNGDLITVWLEDAILNEILDQIDWNF 300
Query: 657 EWMDEQIPVTSPIIPPDSREFLSTLCSECYFQVNVNAKGRPTITATNSSLQLTKTDRIHL 478
EWMDEQIPVTSPIIPPDSREFLSTLCSECYFQVNVNAKGRPTITATNSSLQLTKTDRIHL
Sbjct: 301 EWMDEQIPVTSPIIPPDSREFLSTLCSECYFQVNVNAKGRPTITATNSSLQLTKTDRIHL 360
Query: 477 QVVNPQQQKTTVFVSLVLTITAALRPSFDNGTLRTGVDLLETNIVMENGAFPKAWGAFMT 298
QVVNPQQQKTTVFVSLVLTITAALRPSFDNGTLRTGVDLLETNIVMENGAFPKAWGAFMT
Sbjct: 361 QVVNPQQQKTTVFVSLVLTITAALRPSFDNGTLRTGVDLLETNIVMENGAFPKAWGAFMT 420
Query: 297 DLIRGMIMDMMWPEMQSAIEDLTYGKGLKLSKFCGIDPNNVAIEIAEGSFSLSTRLVLPM 118
DLIRGMIMDMMWPEMQSAIEDLTYGKGLKLSKFCGIDPNNVAIEIAEGSFSLSTRLVLPM
Sbjct: 421 DLIRGMIMDMMWPEMQSAIEDLTYGKGLKLSKFCGIDPNNVAIEIAEGSFSLSTRLVLPM 480
Query: 117 FQSEICLKDLKSSIPNTSKLLQKSQA 40
FQSEICLKDLKSSIPNTSKLLQKSQA
Sbjct: 481 FQSEICLKDLKSSIPNTSKLLQKSQA 506
>gi|39588313|emb|CAE72664.1| Hypothetical protein CBG19878
[Caenorhabditis briggsae]
Length = 517
Score = 893 bits (2307), Expect = 0.0
Identities = 447/505 (88%), Positives = 474/505 (93%), Gaps = 1/505 (0%)
Frame = -1
Query: 1557 MLKPFIIKCSIFLLLILCSVESSEFGVTLGDAAISQLIRHTASQFLEETRVADILLKSNE 1378
M + FIIKC+IFLLL + ++SEFGVTLGDAAISQLIRHTASQFLEETRVA+ILLKSNE
Sbjct: 1 MPETFIIKCTIFLLLF-GTTQTSEFGVTLGDAAISQLIRHTASQFLEETRVANILLKSNE 59
Query: 1377 EPSFGSLAHLKLFNTVSYRNVSVQFRPKVVHVFFENLNVTSHANLSDVIWPIPFSDSLVD 1198
EPSFGSLAHLKLFNTVSYRNVSVQFRPKVVHVFFENLN+TSHANLSDVIWPIPF+DSLVD
Sbjct: 60 EPSFGSLAHLKLFNTVSYRNVSVQFRPKVVHVFFENLNITSHANLSDVIWPIPFADSLVD 119
Query: 1197 SHVKVPRGHLRFIVDDQKVTLSKCALFNPDIAFQLRDSWLINKGIXXXXXXXXXXFEGAL 1018
SHVKVPRGHLRFIVDDQKVTLSKCALFNPDIAFQLRDSWL+NKGI FEGAL
Sbjct: 120 SHVKVPRGHLRFIVDDQKVTLSKCALFNPDIAFQLRDSWLVNKGISAFGSMVSSFFEGAL 179
Query: 1017 CSALSSSTNDLKHKAERKFPIYEFLPKKVQDHMAARNTTLFYRVNSINADDHQLTVRAQI 838
CSALSSSTNDLKHK ERKFPIYEFLPKKVQDHMAARNTTLFYRVNSI+ADDHQLTVRAQI
Sbjct: 180 CSALSSSTNDLKHKTERKFPIYEFLPKKVQDHMAARNTTLFYRVNSIDADDHQLTVRAQI 239
Query: 837 EWQKLIPAANDEASNLLKGQ-EEHGNSTKLLDMEMKNGDLITVWLEDAILNEILDQIDWN 661
EWQKL+PA +DE SNLL GQ EEH N+TKLLDMEMKNGDLIT+WLEDAILNEILDQIDWN
Sbjct: 240 EWQKLVPAVSDETSNLLSGQQEEHSNATKLLDMEMKNGDLITIWLEDAILNEILDQIDWN 299
Query: 660 FEWMDEQIPVTSPIIPPDSREFLSTLCSECYFQVNVNAKGRPTITATNSSLQLTKTDRIH 481
FEWMDEQIPV+SPIIPPDSREFLSTLC+ECYFQVNVNAKGRPTI+ATNSSLQLTKTDRIH
Sbjct: 300 FEWMDEQIPVSSPIIPPDSREFLSTLCTECYFQVNVNAKGRPTISATNSSLQLTKTDRIH 359
Query: 480 LQVVNPQQQKTTVFVSLVLTITAALRPSFDNGTLRTGVDLLETNIVMENGAFPKAWGAFM 301
LQVVNP+Q+KTTVFVSLVLTI A LRPSFDNGTLRT V+LL+T+I ME GAFPK WG FM
Sbjct: 360 LQVVNPEQKKTTVFVSLVLTIQAELRPSFDNGTLRTNVELLDTHIEMEKGAFPKTWGFFM 419
Query: 300 TDLIRGMIMDMMWPEMQSAIEDLTYGKGLKLSKFCGIDPNNVAIEIAEGSFSLSTRLVLP 121
+DLIRGMIMDMMWPE++SAIEDLTYGKGLKLSKFCGIDPNNV I+IAEGSFSLSTRLVLP
Sbjct: 420 SDLIRGMIMDMMWPEIKSAIEDLTYGKGLKLSKFCGIDPNNVVIDIAEGSFSLSTRLVLP 479
Query: 120 MFQSEICLKDLKSSIPNTSKLLQKS 46
MFQSE CLKDLKSSIPNTSKLLQK+
Sbjct: 480 MFQSEACLKDLKSSIPNTSKLLQKT 504
>gi|7497999|pir||T29188 hypothetical protein C55C3.5 - Caenorhabditis
elegans
Length = 431
Score = 727 bits (1876), Expect = 0.0
Identities = 376/425 (88%), Positives = 376/425 (88%), Gaps = 14/425 (3%)
Frame = -1
Query: 1272 NLNVTSHANLSDVIWPIPFSDSLVDSHVKVPRGHLRFIVDDQKVTLSKCALFNPDIAFQL 1093
NLNVTSHANLSDVIWPIPFSDSLVDSHVKVPRGHLRFIVDDQK
Sbjct: 20 NLNVTSHANLSDVIWPIPFSDSLVDSHVKVPRGHLRFIVDDQK----------------- 62
Query: 1092 RDSWLINKGIXXXXXXXXXXFEGALCSALSSSTNDLKHKAERKFPIYEFLPKKVQDHMAA 913
GI FEGALCSALSSSTNDLKHKAERKFPIYEFLPKKVQDHMAA
Sbjct: 63 --------GISAFSSMASSFFEGALCSALSSSTNDLKHKAERKFPIYEFLPKKVQDHMAA 114
Query: 912 RNTTLFYRVNSINADDHQLTVRAQIEWQKLIPAANDEASNLLKGQEEHGNSTKLLDMEMK 733
RNTTLFYRVNSINADDHQLTVRAQIEWQKLIPAANDEASNLLKGQEEHGNSTKLLDMEMK
Sbjct: 115 RNTTLFYRVNSINADDHQLTVRAQIEWQKLIPAANDEASNLLKGQEEHGNSTKLLDMEMK 174
Query: 732 NGDLITVWLEDAILNEILDQIDWNFEWMDEQIPVTSPIIPPDSREFLSTLCSECYFQVNV 553
NGDLITVWLEDAILNEILDQIDWNFEWMDEQIPVTSPIIPPDSREFLSTLCSECYFQVNV
Sbjct: 175 NGDLITVWLEDAILNEILDQIDWNFEWMDEQIPVTSPIIPPDSREFLSTLCSECYFQVNV 234
Query: 552 NAKGRPTITATNSSLQLTK--------------TDRIHLQVVNPQQQKTTVFVSLVLTIT 415
NAKGRPTITATNSSLQLTK TDRIHLQVVNPQQQKTTVFVSLVLTIT
Sbjct: 235 NAKGRPTITATNSSLQLTKKSEFYFKNFKKSEITDRIHLQVVNPQQQKTTVFVSLVLTIT 294
Query: 414 AALRPSFDNGTLRTGVDLLETNIVMENGAFPKAWGAFMTDLIRGMIMDMMWPEMQSAIED 235
AALRPSFDNGTLRTGVDLLETNIVMENGAFPKAWGAFMTDLIRGMIMDMMWPEMQSAIED
Sbjct: 295 AALRPSFDNGTLRTGVDLLETNIVMENGAFPKAWGAFMTDLIRGMIMDMMWPEMQSAIED 354
Query: 234 LTYGKGLKLSKFCGIDPNNVAIEIAEGSFSLSTRLVLPMFQSEICLKDLKSSIPNTSKLL 55
LTYGKGLKLSKFCGIDPNNVAIEIAEGSFSLSTRLVLPMFQSEICLKDLKSSIPNTSKLL
Sbjct: 355 LTYGKGLKLSKFCGIDPNNVAIEIAEGSFSLSTRLVLPMFQSEICLKDLKSSIPNTSKLL 414
Query: 54 QKSQA 40
QKSQA
Sbjct: 415 QKSQA 419