Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C56A3_4
(1137 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17559012|ref|NP_506355.1| putative cytoplasmic protein (5O31)... 749 0.0
gi|39592953|emb|CAE62567.1| Hypothetical protein CBG06678 [Caeno... 619 e-176
gi|27469167|ref|NP_765804.1| streptococcal hemagglutinin protein... 40 0.077
gi|50291531|ref|XP_448198.1| unnamed protein product [Candida gl... 39 0.22
gi|28210262|ref|NP_781206.1| cwp66 homolog/N-acetylmuramoyl-L-al... 39 0.29
gi|50121407|ref|YP_050574.1| lipid A biosynthesis (KDO)2-(lauroy... 38 0.50
gi|34904018|ref|NP_913356.1| P0665D10.7 [Oryza sativa (japonica ... 37 0.65
gi|47566217|ref|ZP_00237245.1| Rab family protein [Bacillus cere... 37 1.1
gi|27364246|ref|NP_759774.1| Lipid A biosynthesis (kdo)2-(lauroy... 36 1.9
gi|15231371|ref|NP_187360.1| disease resistance protein RPM1 (CC... 36 1.9
gi|47217481|emb|CAG10250.1| unnamed protein product [Tetraodon n... 35 2.5
gi|24582255|ref|NP_609050.1| CG13766-PA [Drosophila melanogaster... 35 2.5
gi|16122302|ref|NP_405615.1| lipid A biosynthesis acyltransferas... 35 3.2
gi|6324801|ref|NP_014870.1| Hypothetical ORF; Yor227wp [Saccharo... 35 3.2
gi|31616489|gb|AAP58961.1| PdpD [Francisella tularensis subsp. n... 35 4.2
gi|50289947|ref|XP_447405.1| unnamed protein product [Candida gl... 35 4.2
gi|37526033|ref|NP_929377.1| Lipid A biosynthesis (KDO)2-(lauroy... 35 4.2
gi|42408795|dbj|BAD10056.1| putative PSR9 [Oryza sativa (japonic... 35 4.2
gi|49480077|ref|YP_035555.1| internalin [Bacillus thuringiensis ... 35 4.2
gi|19113482|ref|NP_596690.1| hypothetical serine-rich secreted p... 35 4.2
gi|41023391|emb|CAE52645.1| hypothetical protein [Fowlpox virus ... 34 5.5
gi|48870355|ref|ZP_00323079.1| hypothetical protein PpenA0100100... 34 5.5
gi|9634774|ref|NP_039067.1| ORF FPV104 hypothetical protein [Fow... 34 5.5
gi|26248121|ref|NP_754161.1| Lipid A biosynthesis (KDO)2-(lauroy... 34 5.5
gi|16129808|ref|NP_416369.1| suppressor of htrB, heat shock prot... 34 5.5
gi|15802268|ref|NP_288292.1| suppressor of htrB, heat shock prot... 34 5.5
gi|24113205|ref|NP_707715.1| suppressor of htrB, heat shock prot... 34 5.5
gi|28574432|ref|NP_609740.3| CG4168-PA [Drosophila melanogaster]... 34 7.2
gi|28378856|ref|NP_785748.1| mechanosensitive transport protein ... 34 7.2
gi|7287886|gb|AAF44924.1| hypothetical protein [Drosophila melan... 34 7.2
gi|16760839|ref|NP_456456.1| lipid A acyltransferase [Salmonella... 34 7.2
gi|2133459|pir||S41763 histidine-tRNA ligase (EC 6.1.1.21) - Cae... 33 9.4
gi|15641768|ref|NP_231400.1| type I restriction enzyme HsdR, put... 33 9.4
gi|50308363|ref|XP_454183.1| unnamed protein product [Kluyveromy... 33 9.4
>gi|17559012|ref|NP_506355.1| putative cytoplasmic protein (5O31)
[Caenorhabditis elegans]
gi|7498008|pir||T20266 hypothetical protein C56A3.5 - Caenorhabditis
elegans
gi|3875267|emb|CAB01135.1| Hypothetical protein C56A3.5
[Caenorhabditis elegans]
Length = 378
Score = 749 bits (1933), Expect = 0.0
Identities = 378/378 (100%), Positives = 378/378 (100%)
Frame = +1
Query: 1 MASTRPDNVLVWMASRGSYVESMPGTILRIKNASKFGENLYGFKDQPGELVEVTWDAMFK 180
MASTRPDNVLVWMASRGSYVESMPGTILRIKNASKFGENLYGFKDQPGELVEVTWDAMFK
Sbjct: 1 MASTRPDNVLVWMASRGSYVESMPGTILRIKNASKFGENLYGFKDQPGELVEVTWDAMFK 60
Query: 181 LRPTLVEVDFGRNPCDELVKVIEKNYNNEQISHFFEKVKALSLHMTDITSESLLKLMDKF 360
LRPTLVEVDFGRNPCDELVKVIEKNYNNEQISHFFEKVKALSLHMTDITSESLLKLMDKF
Sbjct: 61 LRPTLVEVDFGRNPCDELVKVIEKNYNNEQISHFFEKVKALSLHMTDITSESLLKLMDKF 120
Query: 361 TLLAAFSFSETKFSTPEWATILKRLSELNLRGIDLSDNILSEVQQHIDVSLMKLSGNPGV 540
TLLAAFSFSETKFSTPEWATILKRLSELNLRGIDLSDNILSEVQQHIDVSLMKLSGNPGV
Sbjct: 121 TLLAAFSFSETKFSTPEWATILKRLSELNLRGIDLSDNILSEVQQHIDVSLMKLSGNPGV 180
Query: 541 DVNEFKKGIEFVTVKVLAVQELKFLGETDAEQLLEVLPQSFPRLETLIWDWNVVDPELNF 720
DVNEFKKGIEFVTVKVLAVQELKFLGETDAEQLLEVLPQSFPRLETLIWDWNVVDPELNF
Sbjct: 181 DVNEFKKGIEFVTVKVLAVQELKFLGETDAEQLLEVLPQSFPRLETLIWDWNVVDPELNF 240
Query: 721 DERTKKVLDQLLFVNKQLNLGSLAVVAYTPNPETKTAIESVARTLKGSIKDVQLHQFATK 900
DERTKKVLDQLLFVNKQLNLGSLAVVAYTPNPETKTAIESVARTLKGSIKDVQLHQFATK
Sbjct: 241 DERTKKVLDQLLFVNKQLNLGSLAVVAYTPNPETKTAIESVARTLKGSIKDVQLHQFATK 300
Query: 901 GLSDGMANFSLIVAGNNEKAMKELMDMYMVDRSTMPPMGKLLRLCEEDIVPIYPAITMDF 1080
GLSDGMANFSLIVAGNNEKAMKELMDMYMVDRSTMPPMGKLLRLCEEDIVPIYPAITMDF
Sbjct: 301 GLSDGMANFSLIVAGNNEKAMKELMDMYMVDRSTMPPMGKLLRLCEEDIVPIYPAITMDF 360
Query: 1081 GGFNKNRIRQLYTESPTD 1134
GGFNKNRIRQLYTESPTD
Sbjct: 361 GGFNKNRIRQLYTESPTD 378