Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= C56C10_12
         (1854 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25149735|ref|NP_495342.2| protein vacuolar sorting 33 (71.6 k...  1246   0.0
gi|7498012|pir||T15853 hypothetical protein C56C10.1 - Caenorhab...   961   0.0
gi|39583121|emb|CAE60661.1| Hypothetical protein CBG04314 [Caeno...   486   e-136
gi|9651486|gb|AAF91174.1| vacuolar protein sorting 33B [Homo sap...   235   3e-60
gi|23396902|sp|P59016|VP3B_MOUSE Vacuolar protein sorting 33B >g...   234   5e-60
gi|18105058|ref|NP_061138.2| vacuolar protein sorting 33B (yeast...   233   2e-59
gi|30017383|ref|NP_835171.1| vacuolar protein sorting 33B [Mus m...   231   3e-59
gi|25742586|ref|NP_071622.1| vacuolar protein sorting homolog r-...   230   1e-58
gi|14042668|dbj|BAB55345.1| unnamed protein product [Homo sapiens]    229   1e-58
gi|8248765|emb|CAB93109.1| VPS33B [Homo sapiens]                      191   5e-47
gi|50756409|ref|XP_415153.1| PREDICTED: similar to vacuolar prot...   162   2e-38
gi|12621146|ref|NP_075250.1| vacuolar protein sorting protein 33...   162   3e-38
gi|18105056|ref|NP_075067.2| vacuolar protein sorting 33A [Homo ...   160   1e-37
gi|23396925|sp|Q9D2N9|VP3A_MOUSE Vacuolar protein sorting 33A >g...   155   3e-36
gi|17017231|gb|AAL33578.1| vacuolar sorting protein 33a [Mus mus...   155   3e-36
gi|31207881|ref|XP_312907.1| ENSANGP00000014711 [Anopheles gambi...   155   3e-36
gi|7498015|pir||T15852 hypothetical protein C56C10.2 - Caenorhab...   155   3e-36
gi|17647233|ref|NP_523410.1| CG12230-PA [Drosophila melanogaster...   155   4e-36
gi|31543950|ref|NP_084205.2| vacuolar sorting protein 33a; buff ...   154   9e-36
gi|46124997|ref|XP_387052.1| hypothetical protein FG06876.1 [Gib...   149   2e-34
gi|49089958|ref|XP_406555.1| hypothetical protein AN2418.2 [Aspe...   148   5e-34
gi|48102413|ref|XP_395353.1| similar to ENSANGP00000014711 [Apis...   145   4e-33
gi|38099336|gb|EAA46693.1| hypothetical protein MG09914.4 [Magna...   144   5e-33
gi|50258119|gb|EAL20813.1| hypothetical protein CNBE1750 [Crypto...   137   1e-30
gi|20380481|gb|AAH28783.1| Vps33b protein [Mus musculus]              134   6e-30
gi|32422139|ref|XP_331513.1| hypothetical protein [Neurospora cr...   132   3e-29
gi|7514114|pir||JC5720 vacuolar protein sorting protein 33a - rat     131   5e-29
gi|18410149|ref|NP_567009.1| vacuolar protein sorting protein, p...   127   9e-28
gi|10439792|dbj|BAB15570.1| unnamed protein product [Homo sapiens]    116   2e-24
gi|19113002|ref|NP_596210.1| putative vacuolar protein sorting p...   115   3e-24
gi|32488156|emb|CAE02908.1| OSJNBb0045P24.17 [Oryza sativa (japo...   101   7e-20
gi|50555143|ref|XP_504980.1| hypothetical protein [Yarrowia lipo...    96   4e-18
gi|42733818|gb|AAS38736.1| similar to Arabidopsis thaliana (Mous...    92   3e-17
gi|7488419|pir||T06734 vacuolar protein sorting protein 33 homol...    89   3e-16
gi|23613862|ref|NP_704883.1| vesicle transport protein, putative...    88   6e-16
gi|49071876|ref|XP_400227.1| hypothetical protein UM02612.1 [Ust...    86   4e-15
gi|2213907|gb|AAB61610.1| putative vacuolar protein sorting homo...    80   2e-13
gi|48111855|ref|XP_396312.1| similar to CG5127-PA [Apis mellifera]     78   6e-13
gi|23485601|gb|EAA20486.1| vacuolar protein sorting homolog r-vp...    78   8e-13
gi|50285723|ref|XP_445290.1| unnamed protein product [Candida gl...    75   7e-12
gi|24650070|ref|NP_651395.1| CG5127-PA [Drosophila melanogaster]...    74   1e-11
gi|47192318|emb|CAF87197.1| unnamed protein product [Tetraodon n...    74   2e-11
gi|17551812|ref|NP_498920.1| vacuolar protein sorting (3J791) [C...    69   5e-10
gi|41019531|sp|P34260|SLP1_CAEEL Protein slp-1 >gnl|BL_ORD_ID|12...    67   1e-09
gi|31242467|ref|XP_321664.1| ENSANGP00000011618 [Anopheles gambi...    64   9e-09
gi|50790385|ref|XP_423561.1| PREDICTED: similar to Prc1-prov pro...    64   1e-08
gi|10438766|dbj|BAB15336.1| unnamed protein product [Homo sapiens]     64   2e-08
gi|45190670|ref|NP_984924.1| AER064Cp [Eremothecium gossypii] >g...    61   8e-08
gi|50753340|ref|XP_425092.1| PREDICTED: similar to RIKEN cDNA 17...    60   2e-07
gi|39581388|emb|CAE69285.1| Hypothetical protein CBG15340 [Caeno...    60   2e-07
gi|6755690|ref|NP_035634.1| syntaxin binding protein 3 [Mus musc...    58   7e-07
gi|47214468|emb|CAG12473.1| unnamed protein product [Tetraodon n...    58   7e-07
gi|46195820|ref|NP_996859.1| syntaxin 1-binding protein [Gallus ...    58   9e-07
gi|16758990|ref|NP_446089.1| syntaxin binding protein 3 [Rattus ...    57   2e-06
gi|47211892|emb|CAF93794.1| unnamed protein product [Tetraodon n...    55   4e-06
gi|39594149|emb|CAE70259.1| Hypothetical protein CBG16760 [Caeno...    55   6e-06
gi|6005886|ref|NP_009200.1| syntaxin binding protein 3; syntaxin...    54   1e-05
gi|17225417|gb|AAL37391.1| syntaxin binding protein 1 [Mus muscu...    54   2e-05
gi|631583|pir||S39346 unc-18 protein homolog, 67K - bovine             53   2e-05
gi|631898|pir||S39345 unc-18 protein homolog, 67K - rat                53   2e-05
gi|50554277|ref|XP_504547.1| hypothetical protein [Yarrowia lipo...    53   2e-05
gi|27881593|gb|AAH38099.1| Syntaxin binding protein 3 [Homo sapi...    53   3e-05
gi|3820482|gb|AAC69606.1| syntaxin 4 binding protein UNC-18c [Ho...    53   3e-05
gi|27807117|ref|NP_777044.1| syntaxin binding protein 1 [Bos tau...    53   3e-05
gi|6981602|ref|NP_037170.1| syntaxin binding protein 1 [Rattus n...    52   4e-05
gi|4507297|ref|NP_003156.1| syntaxin binding protein 1; syntaxin...    52   6e-05
gi|6678179|ref|NP_033321.1| syntaxin binding protein 1; unc18 ho...    51   8e-05
gi|3810884|dbj|BAA32486.1| unnamed protein product [Mus musculus]      51   8e-05
gi|32398818|emb|CAD98528.1| Sec1-family protein, possible [Crypt...    48   7e-04
gi|46229038|gb|EAK89887.1| vacuolar protein sorting protein 33a;...    48   7e-04
gi|29245561|gb|EAA37193.1| GLP_243_20475_22292 [Giardia lamblia ...    48   7e-04
gi|23485721|gb|EAA20542.1| VPS45-like protein [Plasmodium yoelii...    47   0.001
gi|4539254|emb|CAB39843.1| SPBC2A9.01c [Schizosaccharomyces pombe]     47   0.002
gi|49671100|gb|AAH75276.1| Unknown (protein for MGC:88906) [Xeno...    46   0.003
gi|19113995|ref|NP_593083.1| vacuolar protein sorting homolog; S...    46   0.003
gi|17944237|gb|AAL48013.1| LD23683p [Drosophila melanogaster]          45   0.006
gi|18413751|ref|NP_567388.1| cytokinesis-related Sec1 protein, p...    44   0.010
gi|28201893|sp|Q9SZ77|SC1B_ARATH Protein transport Sec1b (AtSec1...    44   0.010
gi|19075874|ref|NP_588374.1| stxbp-unc-18-sec1 family protien tr...    44   0.010
gi|7485573|pir||T06619 hypothetical protein F16J13.190 - Arabido...    44   0.010
gi|16805049|ref|NP_473078.1| vacuolar protein-sorting protein VP...    44   0.013
gi|29248400|gb|EAA39935.1| GLP_479_51730_53655 [Giardia lamblia ...    43   0.029
gi|7447775|pir||JC5722 vacuolar protein sorting protein 45 - hum...    42   0.066
gi|25742604|ref|NP_742069.1| vesicular transport protein rvps45 ...    41   0.086
gi|7305631|ref|NP_038869.1| vacuolar protein sorting 45; vacuola...    41   0.086
gi|15215175|gb|AAH12691.1| Vacuolar protein sorting 45 [Mus musc...    41   0.086
gi|1835260|emb|CAA99990.1| mitotic cyclin [Sesbania rostrata]          39   0.33
gi|38345173|emb|CAE03077.2| OSJNBa0089E12.15 [Oryza sativa (japo...    39   0.33
gi|50750918|ref|XP_422184.1| PREDICTED: similar to Syntaxin bind...    39   0.33
gi|23508134|ref|NP_700804.1| hypothetical protein, conserved [Pl...    39   0.43
gi|46805491|dbj|BAD16956.1| putative vacuolar protein sorting ho...    39   0.43
gi|49071150|ref|XP_399864.1| hypothetical protein UM02249.1 [Ust...    39   0.56
gi|49098470|ref|XP_410668.1| hypothetical protein AN6531.2 [Aspe...    39   0.56
gi|4583679|emb|CAB40417.1| vacuolar protein sorting [Homo sapiens]     39   0.56
gi|18105063|ref|NP_009190.2| vacuolar protein sorting 45A; leuco...    38   0.72
gi|24645413|ref|NP_649909.1| CG8228-PA [Drosophila melanogaster]...    38   0.95
gi|34902382|ref|NP_912537.1| Putative kinesin-related protein [O...    37   1.2
gi|8954367|ref|NP_059356.1| ribosomal protein L6 [Cyanidioschyzo...    37   1.6
gi|31230805|ref|XP_318430.1| ENSANGP00000014333 [Anopheles gambi...    37   1.6
gi|50259897|gb|EAL22565.1| hypothetical protein CNBB4420 [Crypto...    37   2.1
gi|23619474|ref|NP_705436.1| hypothetical protein [Plasmodium fa...    37   2.1
gi|38346693|emb|CAE02178.2| OSJNBa0080E14.9 [Oryza sativa (japon...    37   2.1
gi|50551195|ref|XP_503071.1| hypothetical protein [Yarrowia lipo...    36   2.8
gi|19173295|ref|NP_597098.1| INVOLVED IN UBIQUITIN-DEPENDENT PRO...    36   2.8
gi|3769432|gb|AAC78468.1| RNA polymerase sigma factor 2 [Zea mays]     36   2.8
gi|46137659|ref|XP_390521.1| hypothetical protein FG10345.1 [Gib...    36   3.6
gi|46440984|gb|EAL00285.1| hypothetical protein CaO19.5618 [Cand...    36   3.6
gi|16799744|ref|NP_470012.1| similar to acetyl transferase [List...    36   3.6
gi|45198466|ref|NP_985495.1| AFL053Wp [Eremothecium gossypii] >g...    35   4.7
gi|23509503|ref|NP_702170.1| aspartyl protease, putative [Plasmo...    35   4.7
gi|50309581|ref|XP_454802.1| unnamed protein product [Kluyveromy...    35   4.7
gi|23577914|ref|NP_703018.1| late expression factor - 6 [Rachipl...    35   4.7
gi|46102702|ref|XP_380231.1| hypothetical protein FG00055.1 [Gib...    35   6.1
gi|47187486|emb|CAG14355.1| unnamed protein product [Tetraodon n...    35   6.1
gi|50085032|ref|YP_046542.1| putative UDP-galactose 4-epimerase ...    35   6.1
gi|27881908|gb|AAH44453.1| Max protein [Danio rerio]                   35   8.0
gi|477752|pir||B48059 oncoprotein zMax, splice form 1 - zebra fi...    35   8.0


>gi|25149735|ref|NP_495342.2| protein vacuolar sorting 33 (71.6 kD)
            (2G893) [Caenorhabditis elegans]
 gi|20451215|gb|AAA68769.3| Hypothetical protein C56C10.1
            [Caenorhabditis elegans]
          Length = 617

 Score = 1246 bits (3224), Expect = 0.0
 Identities = 617/617 (100%), Positives = 617/617 (100%)
 Frame = +1

Query: 1    MAPGTAELEIDETLHLLRMVMQREFIHYLETLPGTKELFIDKCLLRPLDMIATSSDMKRH 180
            MAPGTAELEIDETLHLLRMVMQREFIHYLETLPGTKELFIDKCLLRPLDMIATSSDMKRH
Sbjct: 1    MAPGTAELEIDETLHLLRMVMQREFIHYLETLPGTKELFIDKCLLRPLDMIATSSDMKRH 60

Query: 181  GVKRIMHFDLQKSPQVWNIEIDQRVFFLRPNVENARKIVEYVEESSENRSICVIWCNRQL 360
            GVKRIMHFDLQKSPQVWNIEIDQRVFFLRPNVENARKIVEYVEESSENRSICVIWCNRQL
Sbjct: 61   GVKRIMHFDLQKSPQVWNIEIDQRVFFLRPNVENARKIVEYVEESSENRSICVIWCNRQL 120

Query: 361  EECDLAFESSGVIGHITQLSLNMCLLPLESDLFSLQHVESAQPDLFSVANMFVALQNLYG 540
            EECDLAFESSGVIGHITQLSLNMCLLPLESDLFSLQHVESAQPDLFSVANMFVALQNLYG
Sbjct: 121  EECDLAFESSGVIGHITQLSLNMCLLPLESDLFSLQHVESAQPDLFSVANMFVALQNLYG 180

Query: 541  VIPTVYGLGSESKNLWNLVHALCSSNELRARPDQPISHLFLFDRQLDPVPVLLTGASYEG 720
            VIPTVYGLGSESKNLWNLVHALCSSNELRARPDQPISHLFLFDRQLDPVPVLLTGASYEG
Sbjct: 181  VIPTVYGLGSESKNLWNLVHALCSSNELRARPDQPISHLFLFDRQLDPVPVLLTGASYEG 240

Query: 721  LLHEFFTIDCGKLAFPVDLRKQVQTGPLDFDWIEINPEEDKEAHQQNRGDTVKLDNCEDI 900
            LLHEFFTIDCGKLAFPVDLRKQVQTGPLDFDWIEINPEEDKEAHQQNRGDTVKLDNCEDI
Sbjct: 241  LLHEFFTIDCGKLAFPVDLRKQVQTGPLDFDWIEINPEEDKEAHQQNRGDTVKLDNCEDI 300

Query: 901  FASIRNKHVTAALEFLHSKAKSIQKSIEKSSMIDDVADYRNFVEKDLRALKKDHKHCELH 1080
            FASIRNKHVTAALEFLHSKAKSIQKSIEKSSMIDDVADYRNFVEKDLRALKKDHKHCELH
Sbjct: 301  FASIRNKHVTAALEFLHSKAKSIQKSIEKSSMIDDVADYRNFVEKDLRALKKDHKHCELH 360

Query: 1081 INACEMMMNKVKMEDYRTMFKLEHEMLLGTVTHEEYFDFVFERVPMRSCRDVVLSMMSLA 1260
            INACEMMMNKVKMEDYRTMFKLEHEMLLGTVTHEEYFDFVFERVPMRSCRDVVLSMMSLA
Sbjct: 361  INACEMMMNKVKMEDYRTMFKLEHEMLLGTVTHEEYFDFVFERVPMRSCRDVVLSMMSLA 420

Query: 1261 SLKLDGVPDDTYNEFVEMYLQKYGYEHMFELQNLRNSRVIYARRHIAHDRTISERARTWE 1440
            SLKLDGVPDDTYNEFVEMYLQKYGYEHMFELQNLRNSRVIYARRHIAHDRTISERARTWE
Sbjct: 421  SLKLDGVPDDTYNEFVEMYLQKYGYEHMFELQNLRNSRVIYARRHIAHDRTISERARTWE 480

Query: 1441 TLARKFRIVKGNEPMDMSNPSDMSYVFGARISPLLCKIVEDTIDHGWNQAEYERIIGKDK 1620
            TLARKFRIVKGNEPMDMSNPSDMSYVFGARISPLLCKIVEDTIDHGWNQAEYERIIGKDK
Sbjct: 481  TLARKFRIVKGNEPMDMSNPSDMSYVFGARISPLLCKIVEDTIDHGWNQAEYERIIGKDK 540

Query: 1621 VLVEENTYIAADRRPDNRTRKAIMVFVNGGITYWEVAALRLLAIQKNFRILICTTHVIKK 1800
            VLVEENTYIAADRRPDNRTRKAIMVFVNGGITYWEVAALRLLAIQKNFRILICTTHVIKK
Sbjct: 541  VLVEENTYIAADRRPDNRTRKAIMVFVNGGITYWEVAALRLLAIQKNFRILICTTHVIKK 600

Query: 1801 REYLEVRAKDASSVFGS 1851
            REYLEVRAKDASSVFGS
Sbjct: 601  REYLEVRAKDASSVFGS 617


>gi|7498012|pir||T15853 hypothetical protein C56C10.1 - Caenorhabditis
            elegans
          Length = 475

 Score =  961 bits (2484), Expect = 0.0
 Identities = 475/475 (100%), Positives = 475/475 (100%)
 Frame = +1

Query: 427  MCLLPLESDLFSLQHVESAQPDLFSVANMFVALQNLYGVIPTVYGLGSESKNLWNLVHAL 606
            MCLLPLESDLFSLQHVESAQPDLFSVANMFVALQNLYGVIPTVYGLGSESKNLWNLVHAL
Sbjct: 1    MCLLPLESDLFSLQHVESAQPDLFSVANMFVALQNLYGVIPTVYGLGSESKNLWNLVHAL 60

Query: 607  CSSNELRARPDQPISHLFLFDRQLDPVPVLLTGASYEGLLHEFFTIDCGKLAFPVDLRKQ 786
            CSSNELRARPDQPISHLFLFDRQLDPVPVLLTGASYEGLLHEFFTIDCGKLAFPVDLRKQ
Sbjct: 61   CSSNELRARPDQPISHLFLFDRQLDPVPVLLTGASYEGLLHEFFTIDCGKLAFPVDLRKQ 120

Query: 787  VQTGPLDFDWIEINPEEDKEAHQQNRGDTVKLDNCEDIFASIRNKHVTAALEFLHSKAKS 966
            VQTGPLDFDWIEINPEEDKEAHQQNRGDTVKLDNCEDIFASIRNKHVTAALEFLHSKAKS
Sbjct: 121  VQTGPLDFDWIEINPEEDKEAHQQNRGDTVKLDNCEDIFASIRNKHVTAALEFLHSKAKS 180

Query: 967  IQKSIEKSSMIDDVADYRNFVEKDLRALKKDHKHCELHINACEMMMNKVKMEDYRTMFKL 1146
            IQKSIEKSSMIDDVADYRNFVEKDLRALKKDHKHCELHINACEMMMNKVKMEDYRTMFKL
Sbjct: 181  IQKSIEKSSMIDDVADYRNFVEKDLRALKKDHKHCELHINACEMMMNKVKMEDYRTMFKL 240

Query: 1147 EHEMLLGTVTHEEYFDFVFERVPMRSCRDVVLSMMSLASLKLDGVPDDTYNEFVEMYLQK 1326
            EHEMLLGTVTHEEYFDFVFERVPMRSCRDVVLSMMSLASLKLDGVPDDTYNEFVEMYLQK
Sbjct: 241  EHEMLLGTVTHEEYFDFVFERVPMRSCRDVVLSMMSLASLKLDGVPDDTYNEFVEMYLQK 300

Query: 1327 YGYEHMFELQNLRNSRVIYARRHIAHDRTISERARTWETLARKFRIVKGNEPMDMSNPSD 1506
            YGYEHMFELQNLRNSRVIYARRHIAHDRTISERARTWETLARKFRIVKGNEPMDMSNPSD
Sbjct: 301  YGYEHMFELQNLRNSRVIYARRHIAHDRTISERARTWETLARKFRIVKGNEPMDMSNPSD 360

Query: 1507 MSYVFGARISPLLCKIVEDTIDHGWNQAEYERIIGKDKVLVEENTYIAADRRPDNRTRKA 1686
            MSYVFGARISPLLCKIVEDTIDHGWNQAEYERIIGKDKVLVEENTYIAADRRPDNRTRKA
Sbjct: 361  MSYVFGARISPLLCKIVEDTIDHGWNQAEYERIIGKDKVLVEENTYIAADRRPDNRTRKA 420

Query: 1687 IMVFVNGGITYWEVAALRLLAIQKNFRILICTTHVIKKREYLEVRAKDASSVFGS 1851
            IMVFVNGGITYWEVAALRLLAIQKNFRILICTTHVIKKREYLEVRAKDASSVFGS
Sbjct: 421  IMVFVNGGITYWEVAALRLLAIQKNFRILICTTHVIKKREYLEVRAKDASSVFGS 475




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