Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= D2089_2
(969 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|7498235|pir||T20382 hypothetical protein D2089.1 - Caenorhabd... 277 3e-73
gi|25153309|ref|NP_741039.1| serine/aRginine rich pre-mRNA SPlic... 277 3e-73
gi|39597397|emb|CAE59627.1| Hypothetical protein CBG03040 [Caeno... 261 2e-68
gi|48104503|ref|XP_392951.1| similar to CG9712-PA [Apis mellifera] 102 1e-20
gi|28703790|gb|AAH47322.1| Similar to expressed sequence AI45075... 102 2e-20
gi|21040255|ref|NP_631907.1| splicing factor, arginine/serine-ri... 102 2e-20
gi|9910564|ref|NP_064477.1| serine-arginine-rich splicing regula... 102 2e-20
gi|27369842|ref|NP_766180.1| expressed sequence AI450757 [Mus mu... 102 2e-20
gi|26333193|dbj|BAC30314.1| unnamed protein product [Mus musculus] 102 2e-20
gi|26331958|dbj|BAC29709.1| unnamed protein product [Mus musculus] 102 2e-20
gi|39645085|gb|AAH63761.1| Unknown (protein for IMAGE:30142365) ... 102 2e-20
gi|26336164|dbj|BAC31767.1| unnamed protein product [Mus musculus] 102 2e-20
gi|26342486|dbj|BAC34905.1| unnamed protein product [Mus musculus] 102 2e-20
gi|50417233|gb|AAH78219.1| Unknown (protein for MGC:100974) [Dan... 96 2e-18
gi|31197935|ref|XP_307915.1| ENSANGP00000021871 [Anopheles gambi... 95 3e-18
gi|17137528|ref|NP_477347.1| CG4602-PA [Drosophila melanogaster]... 94 6e-18
gi|7532408|gb|AAC32822.3| splicing factor SRp54 [Drosophila mela... 94 6e-18
gi|34877096|ref|XP_237223.2| similar to serine-arginine-rich spl... 86 1e-15
gi|50761541|ref|XP_424756.1| PREDICTED: similar to Splicing fact... 79 2e-13
gi|47228418|emb|CAG05238.1| unnamed protein product [Tetraodon n... 67 8e-10
gi|46228897|gb|EAK89746.1| Sgn1p-like RRM domain containing prot... 49 1e-04
gi|39583259|emb|CAE60051.1| Hypothetical protein CBG03563 [Caeno... 48 4e-04
gi|29126350|gb|AAO66542.1| unknown protein [Oryza sativa (japoni... 47 5e-04
gi|25150290|ref|NP_499649.2| serine/aRginine rich pre-mRNA SPlic... 47 6e-04
gi|11527011|gb|AAG36874.1| SF2 [Caenorhabditis elegans] 47 6e-04
gi|7484802|pir||T01307 alternative splicing factor ASF-2 homolog... 46 0.001
gi|30679138|ref|NP_849537.1| pre-mRNA splicing factor, putative ... 46 0.001
gi|30679143|ref|NP_567235.3| pre-mRNA splicing factor, putative ... 46 0.001
gi|1262277|gb|AAA96781.1| nucleolar phosphoprotein [Tetrahymena ... 46 0.001
gi|50726388|dbj|BAD33999.1| RNA-binding protein-like [Oryza sati... 45 0.002
gi|15235177|ref|NP_192799.1| RNA-binding protein, putative [Arab... 45 0.002
gi|17136764|ref|NP_476891.1| CG9998-PA [Drosophila melanogaster]... 45 0.002
gi|21592882|gb|AAM64832.1| unknown [Arabidopsis thaliana] 45 0.002
gi|47212399|emb|CAF96701.1| unnamed protein product [Tetraodon n... 45 0.002
gi|22331025|ref|NP_566430.2| RNA recognition motif (RRM)-contain... 45 0.002
gi|41351000|gb|AAH65686.1| Cugbp2 protein [Danio rerio] 45 0.002
gi|35903017|ref|NP_919382.1| CUG triplet repeat, RNA binding pro... 45 0.002
gi|14030309|gb|AAK52851.1| Napor [Danio rerio] 45 0.002
gi|3451291|emb|CAA09103.1| ETR-R3b protein [Rattus norvegicus] 45 0.003
gi|31747201|gb|AAP57762.1| ELAV-type RNA-binding protein 3 varia... 45 0.003
gi|4249672|gb|AAD13763.1| apoptosis-related RNA binding protein ... 45 0.003
gi|14701777|gb|AAK72223.1| neuroplastoma apoptosis-related RNA-b... 45 0.003
gi|8567352|ref|NP_058893.1| CUG triplet repeat,RNA-binding prote... 45 0.003
gi|4104559|gb|AAD02074.1| neuroblastoma apoptosis-related RNA bi... 45 0.003
gi|1568643|gb|AAB09040.1| RNA-binding protein BRUNOL3 [Homo sapi... 45 0.003
gi|27924438|gb|AAH45035.1| Cugbp2-A-prov protein [Xenopus laevis] 45 0.003
gi|5729816|ref|NP_006552.1| CUG triplet repeat, RNA binding prot... 45 0.003
gi|14701786|gb|AAK72224.1| neuroplastoma apoptosis-related RNA-b... 45 0.003
gi|16660677|gb|AAL27627.1| neuroblastoma apoptosis-related RNA-b... 45 0.003
gi|45383614|ref|NP_989591.1| CUG triplet repeat, RNA binding pro... 45 0.003
gi|22137759|gb|AAH36391.1| CUGBP2 protein [Homo sapiens] 45 0.003
gi|1568645|gb|AAB09041.1| Etr-3 [Xenopus laevis] 45 0.003
gi|19909958|dbj|BAB87830.1| elav-type ribonucleoprotein-3 [Gallu... 45 0.003
gi|6753780|ref|NP_034290.1| CUG triplet repeat,RNA binding prote... 45 0.003
gi|4249666|gb|AAD13760.1| apoptosis-related RNA binding protein ... 45 0.003
gi|1174153|gb|AAA86641.1| RNA-binding protein 44 0.004
gi|30678391|ref|NP_850933.1| pre-mRNA splicing factor SF2 (SF2) ... 44 0.004
gi|2129717|pir||S71185 splicing factor SF-2 homolog - Arabidopsi... 44 0.004
gi|5815235|gb|AAD52609.1| splicing factor SR1 [Arabidopsis thali... 44 0.004
gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thal... 44 0.004
gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thal... 44 0.004
gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thal... 44 0.004
gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thal... 44 0.004
gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana] 44 0.004
gi|30678395|ref|NP_850934.1| pre-mRNA splicing factor SF2 (SF2) ... 44 0.004
gi|50261702|gb|AAT72436.1| FOG-1 [Caenorhabditis sp. PS1010] >gn... 44 0.005
gi|7440062|pir||T06458 nucleolin homolog - garden pea >gnl|BL_OR... 44 0.005
gi|19115119|ref|NP_594207.1| Protein with 3 RNA binding domains;... 44 0.007
gi|22299055|ref|NP_682302.1| RNA-binding protein [Thermosynechoc... 44 0.007
gi|31206085|ref|XP_311994.1| ENSANGP00000018558 [Anopheles gambi... 43 0.009
gi|3927998|emb|CAA77110.1| elav-type RNA-binding protein [Mus mu... 43 0.009
gi|50753987|ref|XP_414206.1| PREDICTED: similar to ETO/MTG8-rela... 43 0.009
gi|9994185|ref|NP_057174.1| RNA binding motif protein 7 [Homo sa... 43 0.012
gi|7023641|dbj|BAA92036.1| unnamed protein product [Homo sapiens] 43 0.012
gi|50308883|ref|XP_454447.1| unnamed protein product [Kluyveromy... 43 0.012
gi|15220902|ref|NP_175769.1| RNA-binding protein, putative [Arab... 42 0.016
gi|47682782|gb|AAH70262.1| RNA binding motif protein 7 [Homo sap... 42 0.016
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium ... 42 0.016
gi|15223304|ref|NP_174556.1| RNA-binding protein, putative [Arab... 42 0.016
gi|8671859|gb|AAF78422.1| Contains similarity to RNA-binding pro... 42 0.016
gi|14030687|gb|AAK53018.1| At1g32790 [Arabidopsis thaliana] >gnl... 42 0.016
gi|15238531|ref|NP_197832.1| RNA-binding protein, putative [Arab... 42 0.021
gi|50725622|dbj|BAD33089.1| putative RNA-binding protein RBP37 [... 42 0.021
gi|39598286|emb|CAE68978.1| Hypothetical protein CBG14960 [Caeno... 42 0.021
gi|47224440|emb|CAG08690.1| unnamed protein product [Tetraodon n... 42 0.021
gi|50725623|dbj|BAD33090.1| putative RNA-binding protein RBP37 [... 42 0.021
gi|40253662|dbj|BAD05605.1| putative nucleolin [Oryza sativa (ja... 42 0.021
gi|48095947|ref|XP_394565.1| similar to KIAA0117 protein [Apis m... 42 0.027
gi|50261696|gb|AAT72433.1| FOG-1 [Caenorhabditis sp. CB5161] >gn... 42 0.027
gi|41150310|ref|XP_372648.1| similar to embryonic poly(A) bindin... 41 0.036
gi|50252270|dbj|BAD28276.1| putative RNA-binding protein [Oryza ... 41 0.047
gi|18446992|gb|AAL68087.1| AT16577p [Drosophila melanogaster] 41 0.047
gi|24659166|ref|NP_611769.2| CG3162-PA [Drosophila melanogaster]... 41 0.047
gi|23619166|ref|NP_705128.1| splicing factor, putative [Plasmodi... 41 0.047
gi|33860573|ref|NP_892134.1| RNA-binding region RNP-1 (RNA recog... 40 0.061
gi|50553228|ref|XP_504024.1| hypothetical protein [Yarrowia lipo... 40 0.061
gi|38345560|emb|CAE03434.2| OSJNBa0032F06.17 [Oryza sativa (japo... 40 0.061
gi|46805690|dbj|BAD17091.1| putative poly(A) binding protein [Or... 40 0.061
gi|38344339|emb|CAD41755.2| OSJNBa0058K23.21 [Oryza sativa (japo... 40 0.079
gi|46805689|dbj|BAD17090.1| putative poly(A) binding protein [Or... 40 0.079
gi|23483169|gb|EAA18926.1| u1 small nuclear ribonucleoprotein 70... 40 0.079
gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF... 40 0.079
gi|32421473|ref|XP_331180.1| hypothetical protein [Neurospora cr... 40 0.079
gi|23484570|gb|EAA19861.1| KED [Plasmodium yoelii yoelii] 40 0.10
gi|4775271|emb|CAB42558.1| SF2/ASF-like splicing modulator Srp30... 39 0.14
gi|42561847|ref|NP_172386.3| SF2/ASF-like splicing modulator (SR... 39 0.14
gi|15229132|ref|NP_190508.1| RNA-binding protein, putative [Arab... 39 0.14
gi|34903832|ref|NP_913263.1| ATT4F9_7(AL049523|pid:g4539439) Ara... 39 0.14
gi|15238140|ref|NP_196597.1| polyadenylate-binding protein famil... 39 0.14
gi|30683122|ref|NP_850803.1| polyadenylate-binding protein famil... 39 0.14
gi|25386570|pir||E86223 hypothetical protein [imported] - Arabid... 39 0.14
gi|38641399|gb|AAR26263.1| embryonic poly(A) binding protein 2 [... 39 0.14
gi|19112586|ref|NP_595794.1| putative poly(a) binding protein [S... 39 0.18
gi|23487306|gb|EAA21016.1| splicing factor, arginine/serine-rich... 39 0.18
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Crypto... 39 0.18
gi|49078454|ref|XP_402978.1| hypothetical protein UM05363.1 [Ust... 39 0.18
gi|28273596|gb|AAO33927.1| putative polyA-binding protein PABPN2... 39 0.18
gi|45387787|ref|NP_991252.1| hypothetical protein zgc:77804 [Dan... 39 0.18
gi|23508020|ref|NP_700690.1| pre-mRNA splicing factor, putative ... 39 0.18
gi|50261700|gb|AAT72435.1| FOG-1S [Caenorhabditis japonica] >gnl... 39 0.23
gi|50261698|gb|AAT72434.1| FOG-1L [Caenorhabditis japonica] >gnl... 39 0.23
gi|47221657|emb|CAF97922.1| unnamed protein product [Tetraodon n... 39 0.23
gi|46136649|ref|XP_390016.1| hypothetical protein FG09840.1 [Gib... 39 0.23
gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus] 39 0.23
gi|18875338|ref|NP_573459.1| cleavage stimulation factor, 3' pre... 39 0.23
gi|41053933|ref|NP_956250.1| Ras-GTPase-activating protein SH3-d... 39 0.23
gi|40807189|gb|AAH65323.1| Ras-GTPase-activating protein SH3-dom... 39 0.23
gi|50308683|ref|XP_454345.1| unnamed protein product [Kluyveromy... 39 0.23
gi|15231858|ref|NP_188063.1| RNA-binding protein, putative [Arab... 39 0.23
gi|22478042|gb|AAH36719.1| Unknown (protein for MGC:36412) [Mus ... 39 0.23
gi|14250571|gb|AAH08740.1| U2AF2 protein [Homo sapiens] >gnl|BL_... 38 0.30
gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit 38 0.30
gi|47575746|ref|NP_001001217.1| hypothetical protein MGC69406 [X... 38 0.30
gi|26351239|dbj|BAC39256.1| unnamed protein product [Mus musculus] 38 0.30
gi|19909956|dbj|BAB87829.1| bruno-like RNA binding protein [Gall... 38 0.30
gi|46436241|gb|EAK95607.1| hypothetical protein CaO19.8967 [Cand... 38 0.30
gi|46436140|gb|EAK95508.1| hypothetical protein CaO19.1389 [Cand... 38 0.30
gi|34854490|ref|XP_218195.2| similar to splicing factor U2AF hom... 38 0.30
gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-R... 38 0.30
gi|14149675|ref|NP_056050.1| cleavage stimulation factor, 3' pre... 38 0.30
gi|47229663|emb|CAG06859.1| unnamed protein product [Tetraodon n... 38 0.30
gi|41053419|ref|NP_956615.1| hypothetical protein MGC56258 [Dani... 38 0.30
gi|34863338|ref|XP_236212.2| similar to RIKEN cDNA 1500011D06 [R... 38 0.30
gi|27753952|ref|NP_659197.2| RNA binding motif protein 7 [Mus mu... 38 0.30
gi|32493337|gb|AAH54774.1| RNA binding motif protein 7 [Mus musc... 38 0.30
gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation facto... 38 0.30
gi|110998|pir||S22646 splicing factor U2AF homolog - mouse >gnl|... 38 0.30
gi|27735464|gb|AAH41291.1| Cstf-64-prov protein [Xenopus laevis] 38 0.30
gi|50510589|dbj|BAD32280.1| mKIAA0689 protein [Mus musculus] 38 0.30
gi|13752575|ref|NP_112539.1| cleavage stimulation factor, 3' pre... 38 0.30
gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit ... 38 0.30
gi|50748103|ref|XP_421106.1| PREDICTED: similar to CUG triplet r... 38 0.30
gi|39582979|emb|CAE73044.1| Hypothetical protein CBG20414 [Caeno... 38 0.30
gi|34862808|ref|XP_219809.2| similar to Cstf2t-pending protein [... 38 0.30
gi|6005926|ref|NP_009210.1| U2 small nuclear ribonucleoprotein a... 38 0.30
gi|136628|sp|P26369|U2AF_MOUSE Splicing factor U2AF 65 kDa subun... 38 0.30
gi|107723|pir||S20250 splicing factor U2AF large chain - human >... 38 0.30
gi|20072518|gb|AAH26995.1| Cstf2t-pending protein [Mus musculus] 38 0.30
gi|34810648|pdb|1P1T|A Chain A, Nmr Structure Of The N-Terminal ... 38 0.30
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculu... 38 0.30
gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus] 38 0.30
gi|27807239|ref|NP_777110.1| cleavage stimulation factor, 3' pre... 38 0.30
gi|27882060|gb|AAH44032.1| U2af2-prov protein [Xenopus laevis] 38 0.30
gi|50745788|ref|XP_420243.1| PREDICTED: similar to CstF-64 [Gall... 38 0.30
gi|42566726|ref|NP_193001.2| RNA recognition motif (RRM)-contain... 38 0.30
gi|31210063|ref|XP_313998.1| ENSANGP00000022901 [Anopheles gambi... 38 0.39
gi|50414059|ref|XP_457358.1| unnamed protein product [Debaryomyc... 38 0.39
gi|34851983|ref|XP_226547.2| similar to putative polyA-binding p... 38 0.39
gi|5729794|ref|NP_006551.1| CUG triplet repeat, RNA-binding prot... 38 0.39
gi|29371361|gb|AAO72701.1| putative RNA-binding protein [Oryza s... 38 0.39
gi|38570081|ref|NP_941989.1| CUG triplet repeat, RNA-binding pro... 38 0.39
gi|47225344|emb|CAG09844.1| unnamed protein product [Tetraodon n... 38 0.39
gi|46442253|gb|EAL01544.1| hypothetical protein CaO19.7097 [Cand... 38 0.39
gi|49097426|ref|XP_410173.1| hypothetical protein AN6036.2 [Aspe... 38 0.39
gi|19114339|ref|NP_593427.1| putative RNA-binding protein [Schiz... 38 0.39
gi|17374605|sp|Q92879|CUG1_HUMAN CUG triplet repeat RNA-binding ... 38 0.39
gi|34784678|gb|AAH57743.1| MGC69034 protein [Xenopus laevis] 37 0.51
gi|27803030|emb|CAD60733.1| unnamed protein product [Podospora a... 37 0.51
gi|6322982|ref|NP_013054.1| Ribonucleoprotein that contains two ... 37 0.51
gi|15238390|ref|NP_201329.1| polyadenylate-binding protein famil... 37 0.51
gi|31201653|ref|XP_309774.1| ENSANGP00000012477 [Anopheles gambi... 37 0.51
gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subu... 37 0.51
gi|41107668|gb|AAH65442.1| Zgc:77730 protein [Danio rerio] 37 0.51
gi|32129324|gb|AAP73851.1| putative RNA binding protein [Oryza s... 37 0.51
gi|20564190|ref|NP_620767.1| glycoprotein precursor [Watermelon ... 37 0.67
gi|6321599|ref|NP_011675.1| Nucleolar protein that binds nuclear... 37 0.67
gi|39595148|emb|CAE60185.1| Hypothetical protein CBG03741 [Caeno... 37 0.67
gi|253181|gb|AAB22809.1| NSR1=nucleolin homolog [Saccharomyces c... 37 0.67
gi|422617|pir||S32644 nucleolin - African clawed frog >gnl|BL_OR... 37 0.67
gi|47575772|ref|NP_001001230.1| hypothetical protein MGC69525 [X... 37 0.67
gi|26328001|dbj|BAC27741.1| unnamed protein product [Mus musculus] 37 0.88
gi|7498869|pir||T20735 hypothetical protein F11A10.2 - Caenorhab... 37 0.88
gi|34874133|ref|XP_214172.2| poly(A) binding protein, nuclear 1 ... 37 0.88
gi|38089481|ref|XP_356111.1| similar to putative polyA-binding p... 37 0.88
gi|2781419|gb|AAC41243.1| embryo deadenylation element binding p... 37 0.88
gi|4758876|ref|NP_004634.1| poly(A) binding protein, nuclear 1; ... 37 0.88
gi|27807029|ref|NP_776994.1| poly(A) binding protein, nuclear 1 ... 37 0.88
gi|9506945|ref|NP_062275.1| poly(A) binding protein, nuclear 1; ... 37 0.88
gi|32415505|ref|XP_328232.1| predicted protein [Neurospora crass... 37 0.88
gi|24371807|ref|NP_715849.1| RNA-binding protein [Shewanella one... 37 0.88
gi|28828671|gb|AAO51274.1| hypothetical protein [Dictyostelium d... 37 0.88
gi|27924235|gb|AAH45063.1| Pabpn1-prov protein [Xenopus laevis] 37 0.88
gi|17539754|ref|NP_502291.1| RNA-binding protein like (43.9 kD) ... 37 0.88
gi|38087244|ref|XP_141947.2| similar to U2AF65 protein [Mus musc... 37 0.88
gi|46580620|ref|YP_011428.1| RNA-binding protein [Desulfovibrio ... 37 0.88
gi|32265818|ref|NP_859850.1| hypothetical protein [Helicobacter ... 37 0.88
gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens] 37 0.88
gi|780291|gb|AAA65224.1| polyadenylate-binding protein 36 1.1
gi|17510879|ref|NP_492727.1| polyadenylate-binding protein, Poly... 36 1.1
gi|15240057|ref|NP_199209.1| nuclear transport factor 2 (NTF2) f... 36 1.1
gi|42573565|ref|NP_974879.1| nuclear transport factor 2 (NTF2) f... 36 1.1
gi|34856526|ref|XP_342462.1| similar to CUG triplet repeat RNA-b... 36 1.1
gi|38570086|ref|NP_059064.2| CUG triplet repeat, RNA-binding pro... 36 1.1
gi|47213059|emb|CAF93812.1| unnamed protein product [Tetraodon n... 36 1.1
gi|49071454|ref|XP_400016.1| hypothetical protein UM02401.1 [Ust... 36 1.1
gi|47086087|ref|NP_998424.1| zgc:85979 [Danio rerio] >gnl|BL_ORD... 36 1.1
gi|12852385|dbj|BAB29392.1| unnamed protein product [Mus musculus] 36 1.1
gi|50286801|ref|XP_445830.1| unnamed protein product [Candida gl... 36 1.1
gi|23508396|ref|NP_701065.1| hypothetical protein [Plasmodium fa... 36 1.1
gi|31197867|ref|XP_307881.1| ENSANGP00000021766 [Anopheles gambi... 36 1.1
gi|42407676|dbj|BAD08825.1| RNA recognition motif (RRM)-containi... 36 1.1
gi|38570084|ref|NP_941955.1| CUG triplet repeat, RNA-binding pro... 36 1.1
gi|25407526|pir||F85135 hypothetical protein AT4g12630 [imported... 36 1.1
gi|19111982|ref|NP_595190.1| putative RNA binding protein [Schiz... 36 1.1
gi|8745539|gb|AAF78957.1| CUG-binding protein LYLQ isoform; CUG-... 36 1.1
gi|48310520|gb|AAT41832.1| At4g12630 [Arabidopsis thaliana] 36 1.1
gi|12642586|gb|AAK00297.1| BRUNOL2 [Mus musculus] 36 1.1
gi|38422742|emb|CAE54916.1| Hypothetical protein Y106G6H.2b [Cae... 36 1.1
gi|21358097|ref|NP_652611.1| CG6987-PA [Drosophila melanogaster]... 36 1.5
gi|19909960|dbj|BAB87831.1| bruno-like RNA-binding protein [Mus ... 36 1.5
gi|50261694|gb|AAT72432.1| FOG-1 [Caenorhabditis remanei] >gnl|B... 36 1.5
gi|39596949|emb|CAE59176.1| Hypothetical protein CBG02484 [Caeno... 36 1.5
gi|24661225|ref|NP_729429.1| CG5735-PA [Drosophila melanogaster]... 36 1.5
gi|17505625|ref|NP_492504.1| poly binding protein II like (22.6 ... 36 1.5
gi|23479056|gb|EAA15988.1| RNA recognition motif, putative [Plas... 36 1.5
gi|15640189|ref|NP_229816.1| RNA-binding protein [Vibrio cholera... 36 1.5
gi|34867444|ref|XP_221731.2| similar to RNA binding motif protei... 36 1.5
gi|39587561|emb|CAE58499.1| Hypothetical protein CBG01647 [Caeno... 36 1.5
gi|39930581|ref|NP_938044.1| RNA binding motif protein 11 [Mus m... 36 1.5
gi|26333183|dbj|BAC30309.1| unnamed protein product [Mus musculus] 36 1.5
gi|42407940|dbj|BAD09079.1| nucleic acid-binding protein-like [O... 36 1.5
gi|31211005|ref|XP_314469.1| ENSANGP00000020592 [Anopheles gambi... 36 1.5
gi|34894608|ref|NP_908629.1| putative pre-mRNA splicing factor S... 36 1.5
gi|39586050|emb|CAE69126.1| Hypothetical protein CBG15152 [Caeno... 36 1.5
gi|4033483|sp|P90727|U2AF_CAEBR Splicing factor U2AF 65 kDa subu... 36 1.5
gi|42407939|dbj|BAD09078.1| putative nucleic acid-binding protei... 36 1.5
gi|24661213|ref|NP_648266.1| CG5735-PB [Drosophila melanogaster]... 36 1.5
gi|16805279|ref|NP_473307.1| RNA-binding protein, putative [Plas... 35 2.0
gi|21245140|gb|AAM44400.1| U2af splicing factor protein 1, isofo... 35 2.0
gi|25404298|pir||E96634 probable U2 snRNP auxiliary factor T7P1.... 35 2.0
gi|49257722|gb|AAH74531.1| Unknown (protein for MGC:69355) [Xeno... 35 2.0
gi|50260084|gb|EAL22747.1| hypothetical protein CNBB1950 [Crypto... 35 2.0
gi|50255981|gb|EAL18710.1| hypothetical protein CNBI2970 [Crypto... 35 2.0
gi|50760097|ref|XP_417899.1| PREDICTED: similar to Putative RNA-... 35 2.0
gi|15487635|gb|AAL00879.1| U2af splicing factor protein 1, isofo... 35 2.0
gi|11346384|pir||T46221 PRE-MRNA SPLICING FACTOR SF2-like protei... 35 2.0
gi|17556654|ref|NP_497326.1| U2AF splicing factor (55.4 kD) (uaf... 35 2.0
gi|12324445|gb|AAG52185.1| putative splicing factor; 53460-55514... 35 2.0
gi|23613195|ref|NP_703517.1| splicing factor, putative [Plasmodi... 35 2.0
gi|50305507|ref|XP_452713.1| unnamed protein product [Kluyveromy... 35 2.0
gi|32420169|ref|XP_330528.1| hypothetical protein [Neurospora cr... 35 2.0
gi|42565781|ref|NP_190512.3| pre-mRNA splicing factor, putative ... 35 2.0
gi|46580835|ref|YP_011643.1| RNA-binding protein [Desulfovibrio ... 35 2.0
gi|47222698|emb|CAG00132.1| unnamed protein product [Tetraodon n... 35 2.0
gi|30696485|ref|NP_176287.3| U2 snRNP auxiliary factor large sub... 35 2.0
gi|50553814|ref|XP_504318.1| hypothetical protein [Yarrowia lipo... 35 2.0
gi|15217573|ref|NP_177322.1| polyadenylate-binding protein 5 (PA... 35 2.0
gi|166786|gb|AAA32832.1| poly(A)-binding protein 35 2.0
gi|47215074|emb|CAG04528.1| unnamed protein product [Tetraodon n... 35 2.0
gi|6322195|ref|NP_012270.1| U2 snRNP associated protein; Ist3p [... 35 2.0
gi|1710636|sp|P52272|ROM_HUMAN Heterogeneous nuclear ribonucleop... 35 2.6
gi|479852|pir||S35532 hnRNA-binding protein M4 - human >gnl|BL_O... 35 2.6
gi|24584762|ref|NP_609822.1| CG12288-PA [Drosophila melanogaster... 35 2.6
gi|21430048|gb|AAM50702.1| GM13065p [Drosophila melanogaster] 35 2.6
gi|10178023|dbj|BAB11475.1| unnamed protein product [Arabidopsis... 35 2.6
gi|8843848|dbj|BAA97374.1| unnamed protein product [Arabidopsis ... 35 2.6
gi|606751|gb|AAA73522.1| RNA binding protein 35 2.6
gi|17136784|ref|NP_476902.1| CG2163-PA [Drosophila melanogaster]... 35 2.6
gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa (japon... 35 2.6
gi|18423239|ref|NP_568751.1| polyadenylate-binding protein, puta... 35 2.6
gi|21536704|gb|AAM61036.1| contains similarity to poly(A)-bindin... 35 2.6
gi|22327498|ref|NP_568594.2| polyadenylate-binding protein, puta... 35 2.6
gi|37521895|ref|NP_925272.1| RNA-binding protein [Gloeobacter vi... 35 2.6
gi|46579668|ref|YP_010476.1| RNA-binding protein [Desulfovibrio ... 35 2.6
gi|24651491|ref|NP_651820.1| CG1340-PA [Drosophila melanogaster]... 35 2.6
gi|31209491|ref|XP_313712.1| ENSANGP00000017004 [Anopheles gambi... 35 2.6
gi|33864553|ref|NP_896112.1| RNA-binding region RNP-1 (RNA recog... 35 2.6
gi|22477915|gb|AAH36899.1| CPEB4 protein [Homo sapiens] 35 3.3
gi|681904|dbj|BAA06519.1| cp29 [Arabidopsis thaliana] 35 3.3
gi|25148117|ref|NP_741283.1| one twenty two protein (58.9 kD) (4... 35 3.3
gi|49094654|ref|XP_408788.1| hypothetical protein AN4651.2 [Aspe... 35 3.3
gi|33518723|gb|AAQ20844.1| cytoplasmic polyadenylation element b... 35 3.3
gi|47216826|emb|CAG10148.1| unnamed protein product [Tetraodon n... 35 3.3
gi|32698755|ref|NP_085130.1| cytoplasmic polyadenylation element... 35 3.3
gi|21356157|ref|NP_651968.1| CG1101-PA [Drosophila melanogaster]... 35 3.3
gi|12697891|dbj|BAB21764.1| KIAA1673 protein [Homo sapiens] 35 3.3
gi|34870618|ref|XP_220269.2| similar to hypothetical protein [Ra... 35 3.3
gi|22329932|ref|NP_174676.2| polyadenylate-binding protein, puta... 35 3.3
gi|4218957|gb|AAD12246.1| cytoplasmic polyadenylation element-bi... 35 3.3
gi|41055809|ref|NP_957275.1| similar to cytoplasmic polyadenylat... 35 3.3
gi|50755271|ref|XP_414678.1| PREDICTED: similar to cytoplasmic p... 35 3.3
gi|25148120|ref|NP_741284.1| one twenty two protein (4A876) [Cae... 35 3.3
gi|32563919|ref|NP_871826.1| feminization Of Germline FOG-1, Cyt... 35 3.3
gi|46138631|ref|XP_391006.1| hypothetical protein FG10830.1 [Gib... 35 3.3
gi|15231817|ref|NP_190914.1| 29 kDa ribonucleoprotein, chloropla... 35 3.3
gi|133248|sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chlorop... 35 3.3
gi|47123025|gb|AAH70706.1| Unknown (protein for MGC:83450) [Xeno... 35 3.3
gi|17532813|ref|NP_495022.1| protein -binding like family member... 35 3.3
gi|46249522|gb|AAH68729.1| MGC81187 protein [Xenopus laevis] 35 3.3
gi|12853700|dbj|BAB29821.1| unnamed protein product [Mus musculus] 35 3.3
gi|25518601|pir||E86465 hypothetical protein F12G12.4 - Arabidop... 35 3.3
gi|33239465|ref|NP_874407.1| RNA-binding protein, RRM domain [Pr... 35 3.3
gi|37531112|ref|NP_919858.1| putative RNA-binding protein [Oryza... 35 3.3
gi|47210117|emb|CAF91683.1| unnamed protein product [Tetraodon n... 35 3.3
gi|17507847|ref|NP_491123.1| feminization Of Germline FOG-1, Cyt... 35 3.3
gi|34907248|ref|NP_914971.1| putative ribonucleoprotein [Oryza s... 35 3.3
gi|50310969|ref|XP_455507.1| unnamed protein product [Kluyveromy... 35 3.3
gi|30693824|ref|NP_850692.1| 29 kDa ribonucleoprotein, chloropla... 35 3.3
gi|50260008|gb|EAL22671.1| hypothetical protein CNBB1200 [Crypto... 35 3.3
gi|50511043|dbj|BAD32507.1| mKIAA1673 protein [Mus musculus] 35 3.3
gi|11527140|gb|AAG36902.1| poly(A) binding protein II [Xenopus l... 35 3.3
gi|49257848|gb|AAH74235.1| Unknown (protein for MGC:83967) [Xeno... 34 4.4
gi|38142478|ref|NP_938042.1| cytoplasmic polyadenylation element... 34 4.4
gi|31234840|ref|XP_319127.1| ENSANGP00000011813 [Anopheles gambi... 34 4.4
gi|22209060|gb|AAH36444.1| Cytoplasmic polyadenylation element b... 34 4.4
gi|39592264|emb|CAE75485.1| Hypothetical protein CBG23489 [Caeno... 34 4.4
gi|31207793|ref|XP_312863.1| ENSANGP00000016667 [Anopheles gambi... 34 4.4
gi|50345881|ref|NP_055727.3| cytoplasmic polyadenylation element... 34 4.4
gi|50255982|gb|EAL18711.1| hypothetical protein CNBI2970 [Crypto... 34 4.4
gi|47222777|emb|CAG01744.1| unnamed protein product [Tetraodon n... 34 4.4
gi|23613757|ref|NP_704778.1| RNA-binding protein, putative [Plas... 34 4.4
gi|46227298|gb|EAK88248.1| nucleolar protein NOP4; rrm domain co... 34 4.4
gi|31207795|ref|XP_312864.1| ENSANGP00000016551 [Anopheles gambi... 34 4.4
gi|11358102|pir||T48477 hypothetical protein T1E3.170 - Arabidop... 34 4.4
gi|15983487|gb|AAL11611.1| AT5g04810/MUK11_13 [Arabidopsis thali... 34 4.4
gi|12853731|dbj|BAB29832.1| unnamed protein product [Mus musculus] 34 4.4
gi|21700195|dbj|BAC02896.1| tobacco nucleolin [Nicotiana tabacum] 34 4.4
gi|19074720|ref|NP_586226.1| POLYADENYLATE-BINDING PROTEIN 2 [En... 34 4.4
gi|50749613|ref|XP_421688.1| PREDICTED: similar to KIAA0940 prot... 34 4.4
gi|26006231|dbj|BAC41458.1| mKIAA0940 protein [Mus musculus] 34 4.4
gi|40788991|dbj|BAA76784.2| KIAA0940 protein [Homo sapiens] 34 4.4
gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-cont... 34 4.4
gi|48096487|ref|XP_392469.1| similar to CG5735-PB [Apis mellifera] 34 4.4
gi|15239901|ref|NP_196780.1| RNA recognition motif (RRM)-contain... 34 4.4
gi|45524744|ref|ZP_00176010.1| COG0724: RNA-binding proteins (RR... 34 4.4
gi|49328140|gb|AAT58838.1| 'unknown protein, contains RNA recogn... 34 4.4
gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible pr... 34 4.4
gi|21742151|emb|CAD40577.1| OSJNBa0069D17.2 [Oryza sativa (japon... 34 4.4
gi|8918490|dbj|BAA97656.1| RNA-binding protein [Candida boidinii] 34 5.7
gi|17555678|ref|NP_499686.1| RNA binding motif protein like (3O1... 34 5.7
gi|31209465|ref|XP_313699.1| ENSANGP00000003770 [Anopheles gambi... 34 5.7
gi|47086241|ref|NP_998064.1| hypothetical protein zgc:77449 [Dan... 34 5.7
gi|21617920|gb|AAM66970.1| putative RNA-binding protein [Arabido... 34 5.7
gi|47205780|emb|CAF91663.1| unnamed protein product [Tetraodon n... 34 5.7
gi|15228102|ref|NP_181259.1| 29 kDa ribonucleoprotein, chloropla... 34 5.7
gi|50747194|ref|XP_420779.1| PREDICTED: similar to cytoplasmic p... 34 5.7
gi|23612532|ref|NP_704093.1| hypothetical protein [Plasmodium fa... 34 5.7
gi|34526726|dbj|BAC85272.1| unnamed protein product [Homo sapiens] 34 5.7
gi|45201105|ref|NP_986675.1| AGR010Cp [Eremothecium gossypii] >g... 34 5.7
gi|47219371|emb|CAG11000.1| unnamed protein product [Tetraodon n... 34 5.7
gi|18921322|gb|AAL82527.1| putative ribonucleoprotein [Oryza sat... 34 5.7
gi|24642533|ref|NP_524959.1| CG4429-PA [Drosophila melanogaster]... 34 5.7
gi|39590869|emb|CAE65243.1| Hypothetical protein CBG10126 [Caeno... 34 5.7
gi|33188441|ref|NP_872587.1| cytoplasmic polyadenylation element... 34 5.7
gi|39580770|emb|CAE58939.1| Hypothetical protein CBG02207 [Caeno... 34 5.7
gi|34876568|ref|XP_223243.2| similar to RNA-binding protein isof... 34 5.7
gi|9978670|sp|P57052|RBMB_HUMAN Putative RNA-binding protein 11 ... 34 5.7
gi|50428185|ref|XP_459242.1| unnamed protein product [Debaryomyc... 34 5.7
gi|39594035|emb|CAE70145.1| Hypothetical protein CBG16607 [Caeno... 34 5.7
gi|5031703|ref|NP_005745.1| Ras-GTPase-activating protein SH3-do... 34 5.7
gi|49168554|emb|CAG38772.1| G3BP [Homo sapiens] 34 5.7
gi|50261652|gb|AAT72410.1| CPB-1 [Caenorhabditis remanei] >gnl|B... 34 5.7
gi|24642535|ref|NP_727982.1| CG4429-PB [Drosophila melanogaster]... 34 5.7
gi|28557621|gb|AAO45216.1| RE27227p [Drosophila melanogaster] 34 5.7
gi|50261650|gb|AAT72409.1| CPB-1 [Caenorhabditis briggsae] >gnl|... 34 5.7
gi|45555736|ref|NP_996487.1| CG4429-PC [Drosophila melanogaster]... 34 5.7
gi|17137710|ref|NP_477453.1| CG7697-PA [Drosophila melanogaster]... 34 5.7
gi|41052569|dbj|BAD07751.1| putative Ras-GTPase activating prote... 34 5.7
gi|42521960|ref|NP_967340.1| RNA-binding protein [Bdellovibrio b... 34 5.7
gi|38048103|gb|AAR09954.1| similar to Drosophila melanogaster al... 34 5.7
gi|39580202|emb|CAE71709.1| Hypothetical protein CBG18686 [Caeno... 34 5.7
gi|33188439|ref|NP_872291.1| cytoplasmic polyadenylation element... 34 5.7
gi|49092830|ref|XP_407876.1| hypothetical protein AN3739.2 [Aspe... 34 5.7
gi|28565281|ref|NP_787951.1| cytoplasmic polyadenylation element... 34 5.7
gi|23509317|ref|NP_701984.1| hypothetical protein [Plasmodium fa... 34 5.7
gi|29367529|gb|AAO72620.1| putative U2 snRNP auxiliary factor [O... 34 5.7
gi|17531965|ref|NP_495121.1| tia-1 family member (45.2 kD) (2G2)... 34 5.7
gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subu... 34 5.7
gi|34878302|ref|XP_341228.1| similar to mKIAA0940 protein [Rattu... 34 5.7
gi|47230709|emb|CAF99902.1| unnamed protein product [Tetraodon n... 33 7.4
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa (japo... 33 7.4
gi|165650|gb|AAA31448.1| phosphorylase kinase beta-subunit 33 7.4
gi|14141152|ref|NP_005959.2| heterogeneous nuclear ribonucleopro... 33 7.4
gi|3098601|gb|AAC15705.1| Ras-GAP SH3 binding protein [Homo sapi... 33 7.4
gi|42794007|ref|NP_766350.2| DNA segment, Chr 8, ERATO Doi 233, ... 33 7.4
gi|47210116|emb|CAF91682.1| unnamed protein product [Tetraodon n... 33 7.4
gi|21313308|ref|NP_084080.1| heterogeneous nuclear ribonucleopro... 33 7.4
gi|7446356|pir||T06232 Ps16 protein - wheat >gnl|BL_ORD_ID|15835... 33 7.4
gi|50725435|dbj|BAD32907.1| putative polyadenylate-binding prote... 33 7.4
gi|125532|sp|P12798|KPBB_RABIT Phosphorylase B kinase beta regul... 33 7.4
gi|109359|pir||B40793 phosphorylase kinase (EC 2.7.1.38) beta ch... 33 7.4
gi|464252|sp|P20397|NUCL_XENLA Nucleolin (Protein C23) >gnl|BL_O... 33 7.4
gi|33862287|ref|NP_893847.1| RNA-binding region RNP-1 (RNA recog... 33 7.4
gi|38344812|emb|CAE02868.2| OSJNBb0022F23.5 [Oryza sativa (japon... 33 7.4
gi|49086952|ref|XP_405477.1| hypothetical protein AN1340.2 [Aspe... 33 7.4
gi|17532829|ref|NP_495021.1| protein -binding like family member... 33 7.4
gi|7489112|pir||T03934 DNA binding protein ACBF - common tobacco... 33 7.4
gi|15226983|ref|NP_181084.1| 33 kDa ribonucleoprotein, chloropla... 33 7.4
gi|15228016|ref|NP_181204.1| polyadenylate-binding protein, puta... 33 7.4
gi|38099305|gb|EAA46664.1| hypothetical protein MG09885.4 [Magna... 33 7.4
gi|26346951|dbj|BAC37124.1| unnamed protein product [Mus musculus] 33 7.4
gi|18858527|ref|NP_571599.1| daz-like gene [Danio rerio] >gnl|BL... 33 7.4
gi|34535279|dbj|BAC87264.1| unnamed protein product [Homo sapiens] 33 9.7
gi|45359846|ref|NP_987100.1| Ras-GTPase activating protein SH3 d... 33 9.7
gi|26345096|dbj|BAC36197.1| unnamed protein product [Mus musculus] 33 9.7
gi|45198625|ref|NP_985654.1| AFR107Wp [Eremothecium gossypii] >g... 33 9.7
gi|40789096|ref|NP_955517.1| expressed sequence AI463271 [Mus mu... 33 9.7
gi|40788318|dbj|BAA31635.2| KIAA0660 protein [Homo sapiens] 33 9.7
gi|19923399|ref|NP_036429.2| Ras-GTPase activating protein SH3 d... 33 9.7
gi|14916573|sp|Q9UN86|G3B2_HUMAN Ras-GTPase-activating protein b... 33 9.7
gi|31982757|ref|NP_035946.2| Ras-GTPase-activating protein (GAP1... 33 9.7
gi|12230584|sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chl... 33 9.7
gi|1698657|gb|AAC53553.1| ras-GTPase-activating protein SH3-doma... 33 9.7
gi|1350820|sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloro... 33 9.7
gi|32411667|ref|XP_326314.1| hypothetical protein [Neurospora cr... 33 9.7
gi|32398751|emb|CAD98711.1| splicing factor, possible [Cryptospo... 33 9.7
gi|480602|pir||S37085 polyadenylate-binding protein - fern (Anem... 33 9.7
gi|45187874|ref|NP_984097.1| ADR001Cp [Eremothecium gossypii] >g... 33 9.7
gi|37520960|ref|NP_924337.1| RNA-binding protein [Gloeobacter vi... 33 9.7
gi|39580200|emb|CAE71707.1| Hypothetical protein CBG18684 [Caeno... 33 9.7
gi|42526143|ref|NP_971241.1| co-chaperone protein GrpE [Treponem... 33 9.7
gi|34851383|ref|XP_341657.1| phosphorylase kinase, beta [Rattus ... 33 9.7
>gi|7498235|pir||T20382 hypothetical protein D2089.1 -
Caenorhabditis elegans
Length = 480
Score = 277 bits (708), Expect = 3e-73
Identities = 137/137 (100%), Positives = 137/137 (100%)
Frame = +1
Query: 1 LITVDPTLEQLGLPAYPPLPADTDSAKVEEIRRTVYVGNLPKGVDGNEVLELFNMYFGEV 180
LITVDPTLEQLGLPAYPPLPADTDSAKVEEIRRTVYVGNLPKGVDGNEVLELFNMYFGEV
Sbjct: 159 LITVDPTLEQLGLPAYPPLPADTDSAKVEEIRRTVYVGNLPKGVDGNEVLELFNMYFGEV 218
Query: 181 MYARMASGPDALPCAYAYVEFSQQASVCNALQNDGFEFKERPLKIQHSRVAIIKPQAKTD 360
MYARMASGPDALPCAYAYVEFSQQASVCNALQNDGFEFKERPLKIQHSRVAIIKPQAKTD
Sbjct: 219 MYARMASGPDALPCAYAYVEFSQQASVCNALQNDGFEFKERPLKIQHSRVAIIKPQAKTD 278
Query: 361 EQALGEIEEAIRMGRNG 411
EQALGEIEEAIRMGRNG
Sbjct: 279 EQALGEIEEAIRMGRNG 295
Score = 72.8 bits (177), Expect = 1e-11
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +1
Query: 868 DSSDDEWEEKPTPTNGEVKNEEIGNGDVVMASE 966
DSSDDEWEEKPTPTNGEVKNEEIGNGDVVMASE
Sbjct: 448 DSSDDEWEEKPTPTNGEVKNEEIGNGDVVMASE 480
>gi|25153309|ref|NP_741039.1| serine/aRginine rich pre-mRNA SPlicing
factor (52.7 kD) (rsp-7) [Caenorhabditis elegans]
gi|20338917|emb|CAA90135.2| Hypothetical protein D2089.1a
[Caenorhabditis elegans]
gi|20338921|emb|CAA85414.2| Hypothetical protein D2089.1a
[Caenorhabditis elegans]
Length = 452
Score = 277 bits (708), Expect = 3e-73
Identities = 137/137 (100%), Positives = 137/137 (100%)
Frame = +1
Query: 1 LITVDPTLEQLGLPAYPPLPADTDSAKVEEIRRTVYVGNLPKGVDGNEVLELFNMYFGEV 180
LITVDPTLEQLGLPAYPPLPADTDSAKVEEIRRTVYVGNLPKGVDGNEVLELFNMYFGEV
Sbjct: 131 LITVDPTLEQLGLPAYPPLPADTDSAKVEEIRRTVYVGNLPKGVDGNEVLELFNMYFGEV 190
Query: 181 MYARMASGPDALPCAYAYVEFSQQASVCNALQNDGFEFKERPLKIQHSRVAIIKPQAKTD 360
MYARMASGPDALPCAYAYVEFSQQASVCNALQNDGFEFKERPLKIQHSRVAIIKPQAKTD
Sbjct: 191 MYARMASGPDALPCAYAYVEFSQQASVCNALQNDGFEFKERPLKIQHSRVAIIKPQAKTD 250
Query: 361 EQALGEIEEAIRMGRNG 411
EQALGEIEEAIRMGRNG
Sbjct: 251 EQALGEIEEAIRMGRNG 267
Score = 72.8 bits (177), Expect = 1e-11
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +1
Query: 868 DSSDDEWEEKPTPTNGEVKNEEIGNGDVVMASE 966
DSSDDEWEEKPTPTNGEVKNEEIGNGDVVMASE
Sbjct: 420 DSSDDEWEEKPTPTNGEVKNEEIGNGDVVMASE 452