Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= D2089_6
         (1362 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25146814|ref|NP_741042.1| human PTB hnRNP homolog PTB-1, huma...   806   0.0
gi|7498238|pir||T20381 hypothetical protein D2089.4 - Caenorhabd...   751   0.0
gi|25146811|ref|NP_741041.1| human PTB hnRNP homolog PTB-1, huma...   751   0.0
gi|25395616|pir||A88299 protein D2089.4 [imported] - Caenorhabdi...   751   0.0
gi|39597395|emb|CAE59624.1| Hypothetical protein CBG03033 [Caeno...   709   0.0
gi|31230545|ref|XP_318405.1| ENSANGP00000002751 [Anopheles gambi...   424   e-117
gi|16589094|gb|AAL27010.1| hephaestus [Drosophila melanogaster]       418   e-115
gi|24651780|ref|NP_733460.1| CG31000-PB [Drosophila melanogaster...   418   e-115
gi|45552115|ref|NP_788776.2| CG31000-PG [Drosophila melanogaster...   418   e-115
gi|28571965|ref|NP_788780.1| CG31000-PH [Drosophila melanogaster...   418   e-115
gi|17864284|ref|NP_524703.1| CG31000-PC [Drosophila melanogaster...   418   e-115
gi|6002571|gb|AAF00041.1| hnRNP I-related RNA transport protein ...   390   e-107
gi|42490826|gb|AAH66210.1| Unknown (protein for MGC:76740) [Mus ...   389   e-107
gi|28278766|gb|AAH45068.1| Ptbp1-prov protein [Xenopus laevis]        389   e-107
gi|30583817|gb|AAP36157.1| Homo sapiens polypyrimidine tract bin...   389   e-106
gi|13938631|gb|AAH07472.1| Ptbp1 protein [Mus musculus] >gnl|BL_...   389   e-106
gi|4506243|ref|NP_002810.1| polypyrimidine tract-binding protein...   389   e-106
gi|50761061|ref|XP_418219.1| PREDICTED: similar to polypyrimidin...   387   e-106
gi|20809354|gb|AAH28848.1| Ptbp1 protein [Mus musculus]               386   e-106
gi|38197632|gb|AAH61858.1| Ptb protein [Rattus norvegicus]            385   e-105
gi|480289|pir||S36629 polypyrimidine tract-binding protein PTB-2...   384   e-105
gi|266862|sp|Q00438|PTB_RAT Polypyrimidine tract-binding protein...   384   e-105
gi|14165464|ref|NP_114367.1| polypyrimidine tract-binding protei...   382   e-105
gi|47523538|ref|NP_999396.1| polypyrimidine tract-binding protei...   382   e-105
gi|28849152|dbj|BAC65159.1| polypirimidine tract binding protein...   381   e-104
gi|26336949|dbj|BAC32158.1| unnamed protein product [Mus musculu...   379   e-103
gi|26331660|dbj|BAC29560.1| unnamed protein product [Mus musculus]    379   e-103
gi|50751272|ref|XP_422322.1| PREDICTED: similar to non-neuronal ...   377   e-103
gi|14165466|ref|NP_114368.1| polypyrimidine tract-binding protei...   377   e-103
gi|22218304|gb|AAM94624.1| non-neuronal splice variant nPTB3 [Ho...   375   e-102
gi|9507003|ref|NP_062423.1| polypyrimidine tract binding protein...   375   e-102
gi|16580749|dbj|BAB71742.1| PTB-like protein L [Homo sapiens] >g...   375   e-102
gi|25392158|pir||JC7526 polypyrimidine tract-binding protein-lik...   374   e-102
gi|57004|emb|CAA43203.1| pyrimidine binding protein 2 [Rattus no...   374   e-102
gi|13487910|ref|NP_071961.1| pyrimidine binding protein 1; pyrim...   374   e-102
gi|27806103|ref|NP_776867.1| polypyrimidine tract binding protei...   373   e-102
gi|22218306|gb|AAM94625.1| non-neuronal splice variant nPTB4 [Ho...   371   e-101
gi|110819|pir||A41718 polypyrimidine tract-binding protein PTB-1...   371   e-101
gi|13786186|ref|NP_112636.1| regulator of differentiation (in S....   370   e-101
gi|34859921|ref|XP_227635.2| similar to polypyrimidine tract bin...   370   e-101
gi|16307418|gb|AAH10255.1| Polypyrimidine tract binding protein ...   370   e-101
gi|10863997|ref|NP_067013.1| polypyrimidine tract binding protei...   370   e-101
gi|30039680|ref|NP_835458.1| ROD1 regulator of differentiation 1...   369   e-101
gi|21450285|ref|NP_659153.1| ROD1 regulator of differentiation 1...   369   e-101
gi|19911240|dbj|BAB86943.1| polypirimidine tract binding protein...   369   e-100
gi|17861972|gb|AAL39463.1| LD03185p [Drosophila melanogaster]         367   e-100
gi|38569466|ref|NP_005147.3| ROD1 regulator of differentiation 1...   367   e-100
gi|27882560|gb|AAH44585.1| ROD1 protein [Homo sapiens]                367   e-100
gi|50401356|sp|O95758|ROD1_HUMAN Regulator of differentiation 1 ...   367   e-100
gi|38095729|ref|XP_135596.2| similar to Ptbp1 protein [Mus muscu...   342   1e-92
gi|33414511|ref|NP_877970.1| polypyrimidine tract-binding protei...   340   6e-92
gi|6679515|ref|NP_032982.1| polypyrimidine tract binding protein...   332   1e-89
gi|20983091|ref|XP_141607.1| similar to polypyrimidine tract-bin...   327   5e-88
gi|38085915|ref|XP_358182.1| similar to polypyrimidine tract-bin...   327   5e-88
gi|25058871|gb|AAH39896.1| Similar to ROD1 regulator of differen...   312   1e-83
gi|47218405|emb|CAG12676.1| unnamed protein product [Tetraodon n...   302   1e-80
gi|9955329|pdb|1QM9|A Chain A, Nmr, Representative Structure          251   2e-65
gi|28558998|ref|NP_787041.1| polypyrimidine tract-binding protei...   241   2e-62
gi|47209150|emb|CAF89890.1| unnamed protein product [Tetraodon n...   224   5e-57
gi|50762019|ref|XP_424912.1| PREDICTED: similar to regulator of ...   211   4e-53
gi|28949889|emb|CAD70621.1| polypyrimidine track-binding protein...   203   9e-51
gi|22329999|ref|NP_175010.2| polypyrimidine tract-binding protei...   201   3e-50
gi|13879378|gb|AAH06666.1| Ptbp1 protein [Mus musculus]               183   9e-45
gi|26353062|dbj|BAC40161.1| unnamed protein product [Mus musculus]    151   4e-35
gi|16580751|dbj|BAB71743.1| PTB-like protein S [Homo sapiens]         148   3e-34
gi|12851214|dbj|BAB28977.1| unnamed protein product [Mus musculus]    147   4e-34
gi|47198889|emb|CAF88128.1| unnamed protein product [Tetraodon n...   146   1e-33
gi|34862166|ref|XP_237488.2| similar to 25kDa nuclear protein [R...   142   1e-32
gi|34908612|ref|NP_915653.1| P0677H08.6 [Oryza sativa (japonica ...   137   5e-31
gi|47208707|emb|CAF90432.1| unnamed protein product [Tetraodon n...   127   5e-28
gi|40882465|gb|AAR96144.1| RE74969p [Drosophila melanogaster]         114   4e-24
gi|17136488|ref|NP_476731.1| CG9218-PA [Drosophila melanogaster]...   114   7e-24
gi|46981251|gb|AAT07569.1| putative polypyrimidine track-binding...   109   1e-22
gi|34853244|ref|XP_231055.2| similar to Neurexophilin 2 precurso...   104   4e-21
gi|15238677|ref|NP_200130.1| polypyrimidine tract-binding protei...   100   1e-19
gi|15232047|ref|NP_186764.1| polypyrimidine tract-binding protei...    96   3e-18
gi|11358627|pir||T51814 polypyrimidine tract-binding protein hom...    94   6e-18
gi|41176626|gb|AAR99600.1| polypyrimidine binding protein [Trypa...    94   1e-17
gi|41055393|ref|NP_957393.1| similar to heterogeneous nuclear ri...    92   3e-17
gi|42407521|dbj|BAD10638.1| putative polypyrimidine tract-bindin...    92   4e-17
gi|34912728|ref|NP_917711.1| putative polypyrimidine tract-bindi...    90   1e-16
gi|47087069|ref|NP_998548.1| zgc:66175 [Danio rerio] >gnl|BL_ORD...    90   1e-16
gi|34855641|ref|XP_214878.2| heterogeneous nuclear ribonucleopro...    89   2e-16
gi|26351857|dbj|BAC39565.1| unnamed protein product [Mus musculus]     89   2e-16
gi|33667042|ref|NP_796275.2| heterogeneous nuclear ribonucleopro...    89   2e-16
gi|46812638|gb|AAH69184.1| Heterogeneous nuclear ribonucleoprote...    89   2e-16
gi|11527777|dbj|BAB18649.1| heterogeneous nuclear ribonucleoprot...    89   2e-16
gi|4557645|ref|NP_001524.1| heterogeneous nuclear ribonucleoprot...    89   2e-16
gi|26346727|dbj|BAC37012.1| unnamed protein product [Mus musculus]     88   4e-16
gi|47224789|emb|CAG06359.1| unnamed protein product [Tetraodon n...    88   4e-16
gi|18921326|gb|AAL82531.1| putative polypyrimidine tract-binding...    87   9e-16
gi|50416457|gb|AAH77493.1| Unknown (protein for MGC:82601) [Xeno...    87   1e-15
gi|26330256|dbj|BAC28858.1| unnamed protein product [Mus musculus]     86   2e-15
gi|20149709|ref|NP_612403.2| hypothetical protein BC008217 [Homo...    86   2e-15
gi|50756063|ref|XP_414998.1| PREDICTED: similar to hypothetical ...    86   2e-15
gi|12849891|dbj|BAB28521.1| unnamed protein product [Mus musculus]     86   2e-15
gi|33667082|ref|NP_659051.2| RIKEN cDNA 2810036L13 [Mus musculus...    86   2e-15
gi|25988650|gb|AAN76190.1| BLOCK24 variant [Homo sapiens]              86   2e-15
gi|31416927|gb|AAH08217.2| LOC92906 protein [Homo sapiens]             86   2e-15
gi|25988649|gb|AAN76189.1| BLOCK24 variant [Homo sapiens]              86   2e-15
gi|4929470|gb|AAD34009.1| RNA-binding protein XlhnRNPL [Xenopus ...    86   3e-15
gi|33285207|gb|AAL16320.2| Hypothetical protein C44B7.2a [Caenor...    84   6e-15
gi|17532395|ref|NP_495412.1| heterogeneous nuclear ribonucleopro...    81   5e-14
gi|7497376|pir||T15805 hypothetical protein C44B7.2 - Caenorhabd...    81   5e-14
gi|17532397|ref|NP_495411.1| heterogeneous nuclear ribonucleopro...    81   5e-14
gi|23612147|ref|NP_703727.1| polypyrimidine tract binding protei...    81   7e-14
gi|23484718|gb|EAA19954.1| neural polypyrimidine tract binding p...    77   7e-13
gi|34861998|ref|XP_233805.2| similar to 2810036L13Rik protein [R...    76   2e-12
gi|13435822|gb|AAH04763.1| 2810036L13Rik protein [Mus musculus]        76   2e-12
gi|4099724|gb|AAD09652.1| PTBP2 [Homo sapiens]                         75   3e-12
gi|39590251|emb|CAE65989.1| Hypothetical protein CBG11180 [Caeno...    74   1e-11
gi|20260638|gb|AAM13217.1| putative polypyrimidine tract-binding...    74   1e-11
gi|38075526|ref|XP_354793.1| similar to pyrimidine binding prote...    71   7e-11
gi|34863411|ref|XP_236249.2| similar to KIAA0856 protein [Rattus...    66   2e-09
gi|31240113|ref|XP_320470.1| ENSANGP00000016737 [Anopheles gambi...    63   1e-08
gi|20987847|gb|AAH30461.1| Hnrpl protein [Mus musculus]                62   2e-08
gi|2760632|dbj|BAA24237.1| protein L [Mus musculus]                    62   4e-08
gi|24655872|ref|NP_725915.1| CG9218-PD [Drosophila melanogaster]...    59   3e-07
gi|24655867|ref|NP_725914.1| CG9218-PB [Drosophila melanogaster]...    59   3e-07
gi|25009665|gb|AAN71009.1| AT01055p [Drosophila melanogaster]          59   3e-07
gi|24655858|ref|NP_725913.1| CG9218-PC [Drosophila melanogaster]...    59   3e-07
gi|15217573|ref|NP_177322.1| polyadenylate-binding protein 5 (PA...    53   1e-05
gi|166786|gb|AAA32832.1| poly(A)-binding protein                       53   1e-05
gi|38100717|gb|EAA47810.1| hypothetical protein MG03053.4 [Magna...    50   1e-04
gi|27820087|gb|AAO25069.1| GH05823p [Drosophila melanogaster]          50   1e-04
gi|32408509|ref|XP_324736.1| hypothetical protein [Neurospora cr...    50   1e-04
gi|38089612|ref|XP_357917.1| similar to Heterogeneous nuclear ri...    50   1e-04
gi|49111771|ref|XP_411837.1| hypothetical protein AN7700.2 [Aspe...    50   1e-04
gi|48094353|ref|XP_394151.1| similar to ENSANGP00000016737 [Apis...    49   2e-04
gi|50756060|ref|XP_414997.1| PREDICTED: similar to hypothetical ...    48   6e-04
gi|47497548|dbj|BAD19620.1| porin-like protein [Oryza sativa (ja...    47   0.001
gi|47497054|dbj|BAD19106.1| unknown protein [Oryza sativa (japon...    47   0.001
gi|4103869|gb|AAD01869.1| PTBP2 [Gallus gallus]                        46   0.002
gi|31240911|ref|XP_320869.1| ENSANGP00000019197 [Anopheles gambi...    45   0.003
gi|34911438|ref|NP_917066.1| P0431H09.19 [Oryza sativa (japonica...    45   0.003
gi|37806432|dbj|BAC99625.1| hypothetical protein [Oryza sativa (...    45   0.004
gi|42415509|ref|NP_963873.1| non-POU domain containing, octamer-...    45   0.004
gi|19075417|ref|NP_587917.1| RNA binding protein [Schizosaccharo...    44   0.007
gi|50288343|ref|XP_446600.1| unnamed protein product [Candida gl...    44   0.007
gi|45185072|ref|NP_982789.1| ABL158Cp [Eremothecium gossypii] >g...    44   0.009
gi|23956110|ref|NP_067310.1| U2 small nuclear ribonucleoprotein ...    44   0.012
gi|34858820|ref|XP_342529.1| similar to U2 small nuclear ribonuc...    44   0.012
gi|50288333|ref|XP_446595.1| unnamed protein product [Candida gl...    44   0.012
gi|7439965|pir||T00768 polyadenylate-binding protein T22J18.7 - ...    44   0.012
gi|9930616|gb|AAG02117.1| poly(A) binding protein [Arabidopsis t...    44   0.012
gi|17737284|ref|NP_511045.1| CG4528-PA [Drosophila melanogaster]...    44   0.012
gi|15219945|ref|NP_173690.1| polyadenylate-binding protein 3 (PA...    44   0.012
gi|48139036|ref|XP_393440.1| similar to ENSANGP00000019197 [Apis...    44   0.012
gi|4507123|ref|NP_003083.1| small nuclear ribonucleoprotein poly...    43   0.015
gi|480602|pir||S37085 polyadenylate-binding protein - fern (Anem...    43   0.015
gi|38345560|emb|CAE03434.2| OSJNBa0032F06.17 [Oryza sativa (japo...    43   0.015
gi|17541324|ref|NP_500504.1| small nuclear ribonucleoprotein (rn...    43   0.020
gi|50311967|ref|XP_456015.1| unnamed protein product [Kluyveromy...    42   0.026
gi|15227815|ref|NP_179916.1| polyadenylate-binding protein, puta...    42   0.026
gi|13430610|gb|AAK25927.1| putative poly(A) binding protein [Ara...    42   0.026
gi|49257361|gb|AAH72799.1| Unknown (protein for MGC:80122) [Xeno...    42   0.026
gi|12850013|dbj|BAB28565.1| unnamed protein product [Mus musculus]     42   0.034
gi|12311843|emb|CAC22661.1| possible RNA-binding protein [Leishm...    42   0.034
gi|6324132|ref|NP_014202.1| RNA binding protein that binds to an...    42   0.044
gi|6319977|ref|NP_010057.1| Putative RNA binding protein and par...    42   0.044
gi|38637585|dbj|BAD03867.1| hypothetical protein [Oryza sativa (...    42   0.044
gi|7446360|pir||T09108 RNA binding protein, 24K, chloroplast - s...    42   0.044
gi|39585995|emb|CAE68286.1| Hypothetical protein CBG13971 [Caeno...    41   0.076
gi|38637093|dbj|BAD03349.1| hypothetical protein [Oryza sativa (...    40   0.099
gi|34898250|ref|NP_910471.1| hypothetical protien~similar to Ory...    40   0.099
gi|7439967|pir||T06979 polyadenylate-binding protein - wheat >gn...    40   0.099
gi|45433582|ref|NP_991398.1| hypothetical protein MGC75848 [Xeno...    40   0.13
gi|15233980|ref|NP_194208.1| 31 kDa ribonucleoprotein, chloropla...    40   0.13
gi|15294254|gb|AAK95304.1| AT4g24770/F22K18_30 [Arabidopsis thal...    40   0.13
gi|681908|dbj|BAA06521.1| cp31 [Arabidopsis thaliana]                  40   0.13
gi|1076305|pir||S53492 RNA-binding protein cp31 precursor - Arab...    40   0.13
gi|629557|pir||S49030 RNA-binding protein RNP-D precursor - Arab...    40   0.13
gi|99684|pir||S20940 DNA-binding protein - Arabidopsis thaliana        40   0.13
gi|47834699|gb|AAT39003.1| AML15 [Triticum aestivum]                   40   0.13
gi|475719|gb|AAA18379.1| RNA-binding protein 2                         40   0.13
gi|50555840|ref|XP_505328.1| hypothetical protein [Yarrowia lipo...    40   0.17
gi|49077092|ref|XP_402450.1| hypothetical protein UM04835.1 [Ust...    40   0.17
gi|27709474|ref|XP_229071.1| similar to poly(A) binding protein,...    40   0.17
gi|47834693|gb|AAT39000.1| AML1 [Aegilops speltoides]                  39   0.22
gi|45735834|dbj|BAD12869.1| putative meiosis protein mei2 [Oryza...    39   0.22
gi|47834691|gb|AAT38999.1| AML5 [Medicago truncatula]                  39   0.22
gi|39588915|emb|CAE69545.1| Hypothetical protein CBG15757 [Caeno...    39   0.29
gi|49355765|ref|NP_115657.2| ELAV-like protein 3 isoform 2; Hu a...    39   0.29
gi|33356910|pdb|1FNX|H Chain H, Solution Structure Of The Huc Rb...    39   0.29
gi|542846|pir||JC2116 hippocampal 38K autoantigen protein - huma...    39   0.29
gi|49355761|ref|NP_001411.2| ELAV-like protein 3 isoform 1; Hu a...    39   0.29
gi|27229298|ref|NP_758827.1| ELAV-like protein 3 [Rattus norvegi...    39   0.29
gi|1350820|sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloro...    39   0.38
gi|38107608|gb|EAA53755.1| hypothetical protein MG09505.4 [Magna...    39   0.38
gi|12230584|sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chl...    39   0.38
gi|23123859|ref|ZP_00105894.1| COG0724: RNA-binding proteins (RR...    38   0.49
gi|50293545|ref|XP_449184.1| unnamed protein product [Candida gl...    38   0.49
gi|47834705|gb|AAT39006.1| AML1 [Solanum tuberosum]                    38   0.49
gi|7505522|pir||T29387 hypothetical protein K08D10.4 - Caenorhab...    38   0.49
gi|24645384|ref|NP_649899.1| CG9373-PA [Drosophila melanogaster]...    38   0.49
gi|21429908|gb|AAM50632.1| GH11495p [Drosophila melanogaster]          38   0.49
gi|998355|gb|AAA76605.1| colony 1                                      38   0.64
gi|32411147|ref|XP_326054.1| hypothetical protein [Neurospora cr...    38   0.64
gi|28557621|gb|AAO45216.1| RE27227p [Drosophila melanogaster]          38   0.64
gi|50553034|ref|XP_503927.1| hypothetical protein [Yarrowia lipo...    38   0.64
gi|42566920|ref|NP_193546.2| RNA recognition motif (RRM)-contain...    38   0.64
gi|17137710|ref|NP_477453.1| CG7697-PA [Drosophila melanogaster]...    38   0.64
gi|23197794|gb|AAN15424.1| Strong similarity to poly(A)-binding ...    37   0.84
gi|50304193|ref|XP_452046.1| unnamed protein product [Kluyveromy...    37   0.84
gi|19115119|ref|NP_594207.1| Protein with 3 RNA binding domains;...    37   0.84
gi|42571201|ref|NP_973674.1| RNA recognition motif (RRM)-contain...    37   1.1
gi|25408819|pir||E84859 probable RNA-binding protein [imported] ...    37   1.1
gi|18406092|ref|NP_565990.1| RNA recognition motif (RRM)-contain...    37   1.1
gi|47834685|gb|AAT38996.1| Mei2-like protein [Pinus taeda]             37   1.1
gi|23491371|gb|EAA22920.1| Gbp1p protein-related [Plasmodium yoe...    37   1.1
gi|37748043|gb|AAH59527.1| LOC402896 protein [Danio rerio]             37   1.1
gi|50252721|dbj|BAD28947.1| putative AML1 [Oryza sativa (japonic...    37   1.1
gi|50738734|ref|XP_419331.1| PREDICTED: similar to U2 small nucl...    37   1.4
gi|47834701|gb|AAT39004.1| AML1 [Citrus unshiu]                        37   1.4
gi|13560783|gb|AAK30205.1| poly(A)-binding protein [Daucus carota]     37   1.4
gi|47225618|emb|CAG07961.1| unnamed protein product [Tetraodon n...    37   1.4
gi|13548328|emb|CAC35875.1| putative protein [Arabidopsis thaliana]    37   1.4
gi|41107668|gb|AAH65442.1| Zgc:77730 protein [Danio rerio]             37   1.4
gi|47225344|emb|CAG09844.1| unnamed protein product [Tetraodon n...    37   1.4
gi|31206605|ref|XP_312269.1| ENSANGP00000021087 [Anopheles gambi...    36   1.9
gi|31201653|ref|XP_309774.1| ENSANGP00000012477 [Anopheles gambi...    36   1.9
gi|48102436|ref|XP_395357.1| similar to TIA-1 homologue [Apis me...    36   1.9
gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-R...    36   2.4
gi|14149675|ref|NP_056050.1| cleavage stimulation factor, 3' pre...    36   2.4
gi|47834689|gb|AAT38998.1| AML1 [Medicago truncatula]                  36   2.4
gi|34855379|ref|XP_214845.2| similar to U1 small nuclear ribonuc...    36   2.4
gi|38093624|ref|XP_358084.1| similar to small nuclear RNA [Mus m...    36   2.4
gi|2554638|pdb|2U1A|  Rna Binding Domain 2 Of Human U1a Protein,...    36   2.4
gi|47210138|emb|CAF91282.1| unnamed protein product [Tetraodon n...    36   2.4
gi|24661759|ref|NP_648337.1| CG3335-PA [Drosophila melanogaster]...    36   2.4
gi|21064855|gb|AAM29657.1| SD14970p [Drosophila melanogaster]          36   2.4
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculu...    36   2.4
gi|34862808|ref|XP_219809.2| similar to Cstf2t-pending protein [...    36   2.4
gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus]     36   2.4
gi|29336045|ref|NP_444344.1| poly A binding protein, cytoplasmic...    36   2.4
gi|50510589|dbj|BAD32280.1| mKIAA0689 protein [Mus musculus]           36   2.4
gi|38073944|ref|XP_354725.1| similar to U2 small nuclear ribonuc...    36   2.4
gi|26351239|dbj|BAC39256.1| unnamed protein product [Mus musculus]     36   2.4
gi|38093673|ref|XP_111314.2| similar to GLE1-like, RNA export me...    36   2.4
gi|4759156|ref|NP_004587.1| small nuclear ribonucleoprotein poly...    36   2.4
gi|20072518|gb|AAH26995.1| Cstf2t-pending protein [Mus musculus]       36   2.4
gi|13752575|ref|NP_112539.1| cleavage stimulation factor, 3' pre...    36   2.4
gi|41017904|sp|Q62189|RU1A_MOUSE U1 small nuclear ribonucleoprot...    36   2.4
gi|31980689|ref|NP_056597.2| small nuclear ribonucleoprotein pol...    36   2.4
gi|640423|pdb|1SXL|  Sex-Lethal Protein (C-Terminus, Or Second R...    35   3.2
gi|45552119|ref|NP_788881.2| CG33070-PG [Drosophila melanogaster...    35   3.2
gi|28571398|ref|NP_788878.1| CG33070-PH [Drosophila melanogaster...    35   3.2
gi|1403308|emb|CAA67016.1| sex-lethal [Drosophila subobscura]          35   3.2
gi|4929888|pdb|1B7F|A Chain A, Sxl-Lethal ProteinRNA COMPLEX >gn...    35   3.2
gi|28571394|ref|NP_788879.1| CG33070-PA [Drosophila melanogaster...    35   3.2
gi|12643503|sp|Q24668|SXL_DROSU Sex-lethal protein                     35   3.2
gi|6319835|ref|NP_009916.1| Poly(A+) RNA-binding protein, involv...    35   3.2
gi|45552120|ref|NP_788882.2| CG33070-PK [Drosophila melanogaster...    35   3.2
gi|4930239|pdb|3SXL|A Chain A, Sex-Lethal Rna Recognition Domain...    35   3.2
gi|50728210|ref|XP_416034.1| PREDICTED: similar to MADP-1 protei...    35   3.2
gi|28317144|gb|AAO39587.1| LD15933p [Drosophila melanogaster]          35   3.2
gi|45552118|ref|NP_788880.2| CG33070-PF [Drosophila melanogaster...    35   3.2
gi|15901908|ref|NP_346512.1| hypothetical protein SP2093 [Strept...    35   3.2
gi|103381|pir||B39725 sex-lethal sex determination protein MS11 ...    35   3.2
gi|28571396|ref|NP_788875.1| CG33070-PC [Drosophila melanogaster...    35   3.2
gi|28571408|ref|NP_788876.1| CG33070-PD [Drosophila melanogaster...    35   3.2
gi|38541222|gb|AAH62832.1| Unknown (protein for IMAGE:6997127) [...    35   3.2
gi|475720|gb|AAA18380.1| RNA-binding protein 3                         35   4.2
gi|34810648|pdb|1P1T|A Chain A, Nmr Structure Of The N-Terminal ...    35   4.2
gi|24648522|ref|NP_732556.1| CG17838-PD [Drosophila melanogaster...    35   4.2
gi|27807239|ref|NP_777110.1| cleavage stimulation factor, 3' pre...    35   4.2
gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit         35   4.2
gi|49067158|ref|XP_397869.1| predicted protein [Ustilago maydis ...    35   4.2
gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Ara...    35   4.2
gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation facto...    35   4.2
gi|30686138|ref|NP_683582.2| RNA-binding protein, putative [Arab...    35   4.2
gi|24648520|ref|NP_732555.1| CG17838-PE [Drosophila melanogaster...    35   4.2
gi|28317322|gb|AAO39657.1| AT01548p [Drosophila melanogaster]          35   4.2
gi|30689921|ref|NP_195137.2| polyadenylate-binding protein 2 (PA...    35   4.2
gi|1171978|sp|P42731|PAB2_ARATH Polyadenylate-binding protein 2 ...    35   4.2
gi|42408160|dbj|BAD09298.1| putative RNA-binding protein cp33 [O...    35   4.2
gi|27735464|gb|AAH41291.1| Cstf-64-prov protein [Xenopus laevis]       35   4.2
gi|50745788|ref|XP_420243.1| PREDICTED: similar to CstF-64 [Gall...    35   4.2
gi|46439857|gb|EAK99170.1| hypothetical protein CaO19.5767 [Cand...    35   4.2
gi|46439782|gb|EAK99096.1| hypothetical protein CaO19.13190 [Can...    35   4.2
gi|21356139|ref|NP_650913.1| CG17838-PB [Drosophila melanogaster...    35   4.2
gi|24648526|ref|NP_732558.1| CG17838-PC [Drosophila melanogaster...    35   4.2
gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit ...    35   4.2
gi|6650523|gb|AAF21885.1| MEI2 [Arabidopsis thaliana]                  35   4.2
gi|50425207|ref|XP_461195.1| unnamed protein product [Debaryomyc...    35   4.2
gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon n...    35   4.2
gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus]     35   4.2
gi|22478042|gb|AAH36719.1| Unknown (protein for MGC:36412) [Mus ...    35   4.2
gi|18875338|ref|NP_573459.1| cleavage stimulation factor, 3' pre...    35   4.2
gi|46438281|gb|EAK97614.1| hypothetical protein CaO19.7368 [Cand...    35   4.2
gi|45551939|ref|NP_732557.2| CG17838-PA [Drosophila melanogaster...    35   4.2
gi|1083555|pir||S54857 small nuclear ribonucleoprotein U2B'' - m...    35   5.4
gi|7767194|pdb|1D8Z|A Chain A, Solution Structure Of The First R...    35   5.4
gi|21314767|ref|NP_149105.2| MADP-1 protein; U11/U12 snRNP 31K [...    35   5.4
gi|14211667|dbj|BAB56132.1| MADP-1 protein [Homo sapiens] >gnl|B...    35   5.4
gi|9280223|dbj|BAB01713.1| unnamed protein product [Arabidopsis ...    35   5.4
gi|50254444|gb|EAL17193.1| hypothetical protein CNBN0220 [Crypto...    35   5.4
gi|47225009|emb|CAF97424.1| unnamed protein product [Tetraodon n...    35   5.4
gi|33873902|gb|AAH10177.1| MADP-1 protein [Homo sapiens]               35   5.4
gi|38641409|gb|AAR26269.1| nuclear ribonucleoprotein A [Oryctola...    35   5.4
gi|13365525|dbj|BAB39136.1| poly(A)-binding protein [Carassius a...    35   5.4
gi|18423684|ref|NP_568815.1| RNA-binding protein 45 (RBP45), put...    35   5.4
gi|23489676|gb|EAA21642.1| protein gar2 [Plasmodium yoelii yoelii]     35   5.4
gi|7673359|gb|AAF66825.1| poly(A)-binding protein [Nicotiana tab...    35   5.4
gi|31216942|ref|XP_316330.1| ENSANGP00000005992 [Anopheles gambi...    35   5.4
gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis ...    35   5.4
gi|24645403|ref|NP_649903.1| CG16788-PA [Drosophila melanogaster...    34   7.1
gi|7023641|dbj|BAA92036.1| unnamed protein product [Homo sapiens]      34   7.1
gi|14318545|ref|NP_116678.1| Suppressor of DNA polymerase epsilo...    34   7.1
gi|47834703|gb|AAT39005.1| AML1 [Lycopersicon esculentum]              34   7.1
gi|50419345|ref|XP_458197.1| unnamed protein product [Debaryomyc...    34   7.1
gi|29841314|gb|AAP06346.1| similar to myelin gene expression fac...    34   7.1
gi|48429205|sp|Q01617|CPO_DROME Couch potato protein                   34   7.1
gi|45551916|ref|NP_732282.3| CG31243-PE [Drosophila melanogaster...    34   7.1
gi|1173326|sp|P45429|RU1A_XENLA U1 small nuclear ribonucleoprote...    34   7.1
gi|27924189|gb|AAH44979.1| Snf-prov protein [Xenopus laevis]           34   7.1
gi|21615411|emb|CAD33925.1| proline rich protein 3 [Cicer arieti...    34   7.1
gi|19112627|ref|NP_595835.1| putative splicing factor; RNA-bindi...    34   7.1
gi|452239|dbj|BAA05461.1| PES4 PAB-like protein [Saccharomyces c...    34   7.1
gi|9994185|ref|NP_057174.1| RNA binding motif protein 7 [Homo sa...    34   7.1
gi|50424189|ref|XP_460681.1| unnamed protein product [Debaryomyc...    34   9.3
gi|31209491|ref|XP_313712.1| ENSANGP00000017004 [Anopheles gambi...    34   9.3
gi|41054443|ref|NP_955965.1| Unknown (protein for MGC:77810); wu...    34   9.3
gi|25989682|gb|AAN74878.1| putative RNA binding protein [Entamoe...    34   9.3
gi|46121911|ref|XP_385509.1| hypothetical protein FG05333.1 [Gib...    34   9.3
gi|50548145|ref|XP_501542.1| hypothetical protein [Yarrowia lipo...    34   9.3
gi|17532167|ref|NP_495237.1| RNA-binding protein like (2G486) [C...    34   9.3
gi|39597034|emb|CAE59261.1| Hypothetical protein CBG02589 [Caeno...    34   9.3
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding prote...    34   9.3
gi|17555678|ref|NP_499686.1| RNA binding motif protein like (3O1...    34   9.3
gi|9885344|gb|AAG01405.1| heterogeneous nuclear ribonucleoprotei...    34   9.3
gi|21313308|ref|NP_084080.1| heterogeneous nuclear ribonucleopro...    34   9.3
gi|14029147|gb|AAK51123.1| polyadenylated mRNA-binding protein 2...    34   9.3
gi|40796184|gb|AAH65172.1| Hnrpm protein [Mus musculus]                34   9.3
gi|31209465|ref|XP_313699.1| ENSANGP00000003770 [Anopheles gambi...    34   9.3
gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Ory...    34   9.3


>gi|25146814|ref|NP_741042.1| human PTB hnRNP homolog PTB-1, human PTB
            hnRNP homolog (49.6 kD) (ptb-1) [Caenorhabditis elegans]
 gi|20338919|emb|CAD30435.1| Hypothetical protein D2089.4b
            [Caenorhabditis elegans]
          Length = 453

 Score =  806 bits (2083), Expect = 0.0
 Identities = 406/453 (89%), Positives = 406/453 (89%)
 Frame = +1

Query: 1    MAAPQVLTSDHPYHQHDVVFRTXXXXXXXXXXXXXXXXXXSTGRAAGKSVANGSVSNFEV 180
            MAAPQVLTSDHPYHQHDVVFRT                  STGRAAGKSVANGSVSNFEV
Sbjct: 1    MAAPQVLTSDHPYHQHDVVFRTAVVPAAPVNNNDVVVGAASTGRAAGKSVANGSVSNFEV 60

Query: 181  GTQQQPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSA 360
            GTQQQPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSA
Sbjct: 61   GTQQQPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSA 120

Query: 361  QLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLPAGEMTLEQTIAMS 540
            QLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLPAGEMTLEQTIAMS
Sbjct: 121  QLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLPAGEMTLEQTIAMS 180

Query: 541  IPGLQNLIPANPYNFAFGANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYLNPLGLTS 720
            IPGLQNLIPANPYNFAFGANP                             PYLNPLGLTS
Sbjct: 181  IPGLQNLIPANPYNFAFGANPATTFLTTQLAASTAAAAAVNDSANAAALAPYLNPLGLTS 240

Query: 721  ANLAPSISSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNKKDNAL 900
            ANLAPSISSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNKKDNAL
Sbjct: 241  ANLAPSISSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNKKDNAL 300

Query: 901  IQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDAGLTRDYAHSTLHRF 1080
            IQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDAGLTRDYAHSTLHRF
Sbjct: 301  IQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDAGLTRDYAHSTLHRF 360

Query: 1081 KKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFKFFPKDHKMALCQL 1260
            KKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFKFFPKDHKMALCQL
Sbjct: 361  KKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFKFFPKDHKMALCQL 420

Query: 1261 EDIETAIDALIAMHNHKLAENAHLRVSFSKSGI 1359
            EDIETAIDALIAMHNHKLAENAHLRVSFSKSGI
Sbjct: 421  EDIETAIDALIAMHNHKLAENAHLRVSFSKSGI 453


>gi|7498238|pir||T20381 hypothetical protein D2089.4 - Caenorhabditis
            elegans
          Length = 592

 Score =  751 bits (1939), Expect = 0.0
 Identities = 376/406 (92%), Positives = 377/406 (92%)
 Frame = +1

Query: 142  KSVANGSVSNFEVGTQQQPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNT 321
            +SVANGSVSNFEVGTQQQPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNT
Sbjct: 187  QSVANGSVSNFEVGTQQQPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNT 246

Query: 322  FQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 501
            FQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP
Sbjct: 247  FQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 306

Query: 502  AGEMTLEQTIAMSIPGLQNLIPANPYNFAFGANPXXXXXXXXXXXXXXXXXXXXXXXXXX 681
            AGEMTLEQTIAMSIPGLQNLIPANPYNFAFGANP
Sbjct: 307  AGEMTLEQTIAMSIPGLQNLIPANPYNFAFGANPATTFLTTQLAASTAAAAAVNDSANAA 366

Query: 682  XXXPYLNPLGLTSANLAPSISSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDVM 861
               PYLNPLGLTSANLAPSISSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDVM
Sbjct: 367  ALAPYLNPLGLTSANLAPSISSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDVM 426

Query: 862  RVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDAG 1041
            RVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDAG
Sbjct: 427  RVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDAG 486

Query: 1042 LTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFK 1221
            LTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFK
Sbjct: 487  LTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFK 546

Query: 1222 FFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSGI 1359
            FFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSGI
Sbjct: 547  FFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSGI 592


>gi|25146811|ref|NP_741041.1| human PTB hnRNP homolog PTB-1, human PTB
            hnRNP homolog (67.1 kD) (ptb-1) [Caenorhabditis elegans]
 gi|20338920|emb|CAA85411.3| Hypothetical protein D2089.4a
            [Caenorhabditis elegans]
          Length = 615

 Score =  751 bits (1939), Expect = 0.0
 Identities = 376/406 (92%), Positives = 377/406 (92%)
 Frame = +1

Query: 142  KSVANGSVSNFEVGTQQQPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNT 321
            +SVANGSVSNFEVGTQQQPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNT
Sbjct: 210  ESVANGSVSNFEVGTQQQPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNT 269

Query: 322  FQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 501
            FQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP
Sbjct: 270  FQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 329

Query: 502  AGEMTLEQTIAMSIPGLQNLIPANPYNFAFGANPXXXXXXXXXXXXXXXXXXXXXXXXXX 681
            AGEMTLEQTIAMSIPGLQNLIPANPYNFAFGANP
Sbjct: 330  AGEMTLEQTIAMSIPGLQNLIPANPYNFAFGANPATTFLTTQLAASTAAAAAVNDSANAA 389

Query: 682  XXXPYLNPLGLTSANLAPSISSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDVM 861
               PYLNPLGLTSANLAPSISSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDVM
Sbjct: 390  ALAPYLNPLGLTSANLAPSISSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDVM 449

Query: 862  RVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDAG 1041
            RVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDAG
Sbjct: 450  RVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDAG 509

Query: 1042 LTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFK 1221
            LTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFK
Sbjct: 510  LTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFK 569

Query: 1222 FFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSGI 1359
            FFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSGI
Sbjct: 570  FFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSGI 615


>gi|25395616|pir||A88299 protein D2089.4 [imported] - Caenorhabditis
            elegans
          Length = 584

 Score =  751 bits (1939), Expect = 0.0
 Identities = 376/406 (92%), Positives = 377/406 (92%)
 Frame = +1

Query: 142  KSVANGSVSNFEVGTQQQPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNT 321
            +SVANGSVSNFEVGTQQQPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNT
Sbjct: 179  QSVANGSVSNFEVGTQQQPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNT 238

Query: 322  FQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 501
            FQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP
Sbjct: 239  FQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 298

Query: 502  AGEMTLEQTIAMSIPGLQNLIPANPYNFAFGANPXXXXXXXXXXXXXXXXXXXXXXXXXX 681
            AGEMTLEQTIAMSIPGLQNLIPANPYNFAFGANP
Sbjct: 299  AGEMTLEQTIAMSIPGLQNLIPANPYNFAFGANPATTFLTTQLAASTAAAAAVNDSANAA 358

Query: 682  XXXPYLNPLGLTSANLAPSISSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDVM 861
               PYLNPLGLTSANLAPSISSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDVM
Sbjct: 359  ALAPYLNPLGLTSANLAPSISSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDVM 418

Query: 862  RVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDAG 1041
            RVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDAG
Sbjct: 419  RVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDAG 478

Query: 1042 LTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFK 1221
            LTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFK
Sbjct: 479  LTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFK 538

Query: 1222 FFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSGI 1359
            FFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSGI
Sbjct: 539  FFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSGI 584


>gi|39597395|emb|CAE59624.1| Hypothetical protein CBG03033
            [Caenorhabditis briggsae]
          Length = 610

 Score =  709 bits (1831), Expect = 0.0
 Identities = 357/407 (87%), Positives = 367/407 (89%), Gaps = 1/407 (0%)
 Frame = +1

Query: 142  KSVANGSVSNFEVGTQQQPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNT 321
            +SVANGSVSNFEVGTQQQPNSVLRTIIENMMFPVSL+VL+QLF RYGKVLRIITFNKNNT
Sbjct: 207  ESVANGSVSNFEVGTQQQPNSVLRTIIENMMFPVSLEVLHQLFARYGKVLRIITFNKNNT 266

Query: 322  FQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 501
            FQAL+QMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP
Sbjct: 267  FQALIQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 326

Query: 502  AGEMTLEQTIAMS-IPGLQNLIPANPYNFAFGANPXXXXXXXXXXXXXXXXXXXXXXXXX 678
             GEMTLEQ IA+S IPGLQNLIP NPYNFAFGANP
Sbjct: 327  PGEMTLEQQIAISTIPGLQNLIPTNPYNFAFGANPATTFLTNQLATATAAASDSANAAAL 386

Query: 679  XXXXPYLNPLGLTSANLAPSISSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDV 858
                PYLNPLGL SANLA SI +MRFPM+NLTPVILVSNLHEMKVTTDALFTLFGVYGDV
Sbjct: 387  A---PYLNPLGLGSANLATSIPAMRFPMLNLTPVILVSNLHEMKVTTDALFTLFGVYGDV 443

Query: 859  MRVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDA 1038
            MRVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDA
Sbjct: 444  MRVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDA 503

Query: 1039 GLTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAF 1218
            GLTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIP +VSE+KLKEMF EAG+AVKAF
Sbjct: 504  GLTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPATVSEDKLKEMFLEAGYAVKAF 563

Query: 1219 KFFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSGI 1359
            KFFPKDHKMALCQLEDIETAIDALI MHNHKLAENAHLRVSFSKSGI
Sbjct: 564  KFFPKDHKMALCQLEDIETAIDALIKMHNHKLAENAHLRVSFSKSGI 610




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