Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= E01G4_6
         (2235 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17532757|ref|NP_496836.1| putative protein, with 3 coiled coi...  1058   0.0
gi|39591291|emb|CAE73344.1| Hypothetical protein CBG20775 [Caeno...   907   0.0
gi|27695207|gb|AAH41722.1| Flj11021-prov protein [Xenopus laevis]      43   0.028
gi|46318109|ref|ZP_00218613.1| hypothetical protein Bucepa020068...    42   0.048
gi|34897098|ref|NP_909895.1| hypothetical protein [Oryza sativa ...    41   0.11
gi|50750469|ref|XP_422008.1| PREDICTED: similar to peptidyl-prol...    40   0.18
gi|50555896|ref|XP_505356.1| hypothetical protein [Yarrowia lipo...    40   0.31
gi|45361503|ref|NP_989328.1| hypothetical protein MGC75633 [Xeno...    39   0.41
gi|29165866|gb|AAH49177.1| Kiaa1518-prov protein [Xenopus laevis]      39   0.53
gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus]     39   0.53
gi|17543644|ref|NP_500025.1| RNA-binding region containing 2 lik...    39   0.53
gi|10181126|ref|NP_065612.1| splicing factor, arginine/serine-ri...    39   0.53
gi|30046580|gb|AAH50451.1| U2AF1L2 protein [Homo sapiens]              39   0.69
gi|50550277|ref|XP_502611.1| hypothetical protein [Yarrowia lipo...    39   0.69
gi|46126105|ref|XP_387606.1| hypothetical protein FG07430.1 [Gib...    38   0.90
gi|4742001|gb|AAD28798.1| serine-threonine kinase 9 [Takifugu ru...    38   1.2
gi|15673044|ref|NP_267218.1| ABC transporter ATP binding protein...    37   1.5
gi|6324769|ref|NP_014838.1| Kinetochore-associated protein requi...    37   1.5
gi|39596864|emb|CAE59091.1| Hypothetical protein CBG02383 [Caeno...    37   1.5
gi|32403078|ref|XP_322152.1| hypothetical protein [Neurospora cr...    37   1.5
gi|39592272|emb|CAE75493.1| Hypothetical protein CBG23497 [Caeno...    37   1.5
gi|17531779|ref|NP_495433.1| putative secreted or extracellular ...    37   1.5
gi|24650338|ref|NP_733157.1| CG31082-PA [Drosophila melanogaster...    37   2.0
gi|46108130|ref|XP_381123.1| hypothetical protein FG00947.1 [Gib...    37   2.6
gi|17535047|ref|NP_494702.1| putative nuclear protein, with 4 co...    37   2.6
gi|7505747|pir||T32009 hypothetical protein K10G6.4 - Caenorhabd...    37   2.6
gi|4826690|ref|NP_004932.1| DEAH (Asp-Glu-Ala-His) box polypepti...    36   3.4
gi|27882034|gb|AAH44586.1| DHX8 protein [Homo sapiens]                 36   3.4
gi|28704113|gb|AAH47327.1| DHX8 protein [Homo sapiens]                 36   3.4
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]         36   3.4
gi|6323226|ref|NP_013298.1| part of small (ribosomal) subunit (S...    36   3.4
gi|17537523|ref|NP_497064.1| putative nuclear protein, with 2 co...    36   3.4
gi|17506341|ref|NP_491200.1| son protein (89.7 kD) (1E257) [Caen...    36   4.5
gi|20806787|ref|NP_621958.1| ATPase involved in DNA repair [Ther...    36   4.5
gi|29248170|gb|EAA39711.1| GLP_741_55154_50292 [Giardia lamblia ...    36   4.5
gi|16119203|ref|NP_395539.1| hypothetical protein [Staphylococcu...    36   4.5
gi|46105414|ref|XP_380511.1| hypothetical protein FG00335.1 [Gib...    36   4.5
gi|39581937|emb|CAE72899.1| Hypothetical protein CBG20213 [Caeno...    35   5.9
gi|17532817|ref|NP_495013.1| serine/aRginine rich pre-mRNA SPlic...    35   5.9
gi|47497180|dbj|BAD19227.1| putative splicing factor RSZp22 (RSZ...    35   5.9
gi|17506453|ref|NP_491301.1| putative nuclear protein, with 2 co...    35   5.9
gi|31217812|ref|XP_316510.1| ENSANGP00000013532 [Anopheles gambi...    35   5.9
gi|13195258|gb|AAK15626.1| 235 kDa rhoptry protein [Plasmodium y...    35   5.9
gi|48140357|ref|XP_393502.1| similar to ENSANGP00000025213 [Apis...    35   5.9
gi|23491117|gb|EAA22730.1| 235 kDa rhoptry protein [Plasmodium y...    35   5.9
gi|7494465|pir||T28677 rhoptry protein - Plasmodium yoelii >gnl|...    35   5.9
gi|2133394|pir||S61535 nucleotide-binding head-stalk protein 183...    35   7.6
gi|23484285|gb|EAA19671.1| Ran-binding protein [Plasmodium yoeli...    35   7.6
gi|39590269|emb|CAE66007.1| Hypothetical protein CBG11198 [Caeno...    35   7.6
gi|23104375|ref|ZP_00090841.1| COG1131: ABC-type multidrug trans...    35   7.6
gi|39597397|emb|CAE59627.1| Hypothetical protein CBG03040 [Caeno...    35   7.6
gi|23482914|gb|EAA18756.1| DEAD-box RNA helicase [Plasmodium yoe...    35   10.0
gi|23003485|ref|ZP_00047147.1| COG0834: ABC-type amino acid tran...    35   10.0
gi|9945014|gb|AAG03078.1| variant surface glycoprotein [Trypanos...    35   10.0
gi|46438486|gb|EAK97816.1| hypothetical protein CaO19.964 [Candi...    35   10.0
gi|50345112|ref|NP_001002229.1| zgc:92458 [Danio rerio] >gnl|BL_...    35   10.0
gi|49900531|gb|AAH76555.1| Unknown (protein for IMAGE:7044154) [...    35   10.0
gi|28830036|gb|AAO52526.1| similar to Xenopus laevis (African cl...    35   10.0
gi|22268151|gb|AAH26944.1| Sfrs4 protein [Mus musculus]                35   10.0
gi|20978758|sp|Q8VE97|SFR4_MOUSE Splicing factor, arginine/serin...    35   10.0
gi|39582082|emb|CAE63725.1| Hypothetical protein CBG08250 [Caeno...    35   10.0
gi|23483514|gb|EAA19159.1| hypothetical protein [Plasmodium yoel...    35   10.0
gi|18976707|ref|NP_578064.1| flagella-related protein d, putativ...    35   10.0
gi|31242247|ref|XP_321554.1| ENSANGP00000018144 [Anopheles gambi...    35   10.0
gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginin...    35   10.0
gi|9049666|gb|AAF82413.1| nucleocapsid protein [porcine epidemic...    35   10.0
gi|32413379|ref|XP_327169.1| hypothetical protein [Neurospora cr...    35   10.0
gi|21361282|ref|NP_005617.2| splicing factor, arginine/serine-ri...    35   10.0


>gi|17532757|ref|NP_496836.1| putative protein, with 3 coiled coil-4
            domains (99.6 kD) (2N775) [Caenorhabditis elegans]
 gi|7498285|pir||T20405 hypothetical protein E01G4.6 - Caenorhabditis
            elegans
 gi|3875418|emb|CAB05719.1| Hypothetical protein E01G4.6
            [Caenorhabditis elegans]
 gi|3877269|emb|CAB04387.1| Hypothetical protein E01G4.6
            [Caenorhabditis elegans]
          Length = 884

 Score = 1058 bits (2737), Expect = 0.0
 Identities = 563/745 (75%), Positives = 563/745 (75%)
 Frame = +1

Query: 1    MRXXXXXXXXXXXXPTVIGLKSNRTSCFHYVSCLEATEANLKQCAGGTAISLTLEAKDVN 180
            MR            PTVIGLKSNRTSCFHYVSCLEATEANLKQCAGGTAISLTLEAKDVN
Sbjct: 1    MRIIACSLLIASLIPTVIGLKSNRTSCFHYVSCLEATEANLKQCAGGTAISLTLEAKDVN 60

Query: 181  IRDLVKYRALEFVGCQDRLLKEVVDFESLQILVNEDARECFEKLPESSKRVEEFTDSCDY 360
            IRDLVKYRALEFVGCQDRLLKEVVDFESLQILVNEDARECFEKLPESSKRVEEFTDSCDY
Sbjct: 61   IRDLVKYRALEFVGCQDRLLKEVVDFESLQILVNEDARECFEKLPESSKRVEEFTDSCDY 120

Query: 361  VQPVSRNASKGDALQCLIEFKQDREYCESLLECCPDHTRCGERMNAVSLSYQNARVKAEQ 540
            VQPVSRNASKGDALQCLIEFKQDREYCESLLECCPDHTRCGERMNAVSLSYQNARVKAEQ
Sbjct: 121  VQPVSRNASKGDALQCLIEFKQDREYCESLLECCPDHTRCGERMNAVSLSYQNARVKAEQ 180

Query: 541  IVYSMISCIVVNDPRFLREGARLQSLRDPYRNAGVPFLRPDAYTEXXXXXXXXXXXXXXX 720
            IVYSMISCIVVNDPRFLREGARLQSLRDPYRNAGVPFLRPDAYTE
Sbjct: 181  IVYSMISCIVVNDPRFLREGARLQSLRDPYRNAGVPFLRPDAYTEARITRRLALTSTATL 240

Query: 721  XQRRERFLKKYSQIRQVVAQNLFGQQQRLTRPVEDLVTETSSKLAVXXXXXXXXXXXXXX 900
             QRRERFLKKYSQIRQVVAQNLFGQQQRLTRPVEDLVTETSSKLAV
Sbjct: 241  SQRRERFLKKYSQIRQVVAQNLFGQQQRLTRPVEDLVTETSSKLAVEEAPEETTTQEETT 300

Query: 901  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEMHVNTIRNMIRSASEKDLSKY 1080
                                                SSEMHVNTIRNMIRSASEKDLSKY
Sbjct: 301  TDASEVTTTKAVEEATEEVTEEATEATEAPVATTKESSEMHVNTIRNMIRSASEKDLSKY 360

Query: 1081 VTLISEGKFSELFELAEQKKLTLTSKFDEKLSSKMAKLKDLINEALSEKEKSGEIEQAME 1260
            VTLISEGKFSELFELAEQKKLTLTSKFDEKLSSKMAKLKDLINEALSEKEKSGEIEQAME
Sbjct: 361  VTLISEGKFSELFELAEQKKLTLTSKFDEKLSSKMAKLKDLINEALSEKEKSGEIEQAME 420

Query: 1261 KFEKPEKSELVAMEDKDTPAVFTISDSXXXXXXXXXXXXTIVSRNVVEAENAIXXXXXXX 1440
            KFEKPEKSELVAMEDKDTPAVFTISDS            TIVSRNVVEAENAI
Sbjct: 421  KFEKPEKSELVAMEDKDTPAVFTISDSLKHKKAEAKLAHTIVSRNVVEAENAIEKEVVEP 480

Query: 1441 XXXXXXXXXXXXXXXXXXXXXXXXPGKLPMKIEKLEKPVDTKSENHELKKVLDDKERALL 1620
                                    PGKLPMKIEKLEKPVDTKSENHELKKVLDDKERALL
Sbjct: 481  KAEEKKVKEEDVKAVAEEKKEEKKPGKLPMKIEKLEKPVDTKSENHELKKVLDDKERALL 540

Query: 1621 VESEIKNTAEETKPKVESFKSEETTVAIDDMPALXXXXXXXXXXXXXXXXXXXXXXXXXX 1800
            VESEIKNTAEETKPKVESFKSEETTVAIDDMPAL
Sbjct: 541  VESEIKNTAEETKPKVESFKSEETTVAIDDMPALEKEESAEKKETTGEPTTTEAAVETTE 600

Query: 1801 XXXXPKPEAKPELLSNXXXXXXXXXXXXXXIEGSGERXXXXXXXXXXXXXXXXXLLKSSS 1980
                PKPEAKPELLSN              IEGSGER                 LLKSSS
Sbjct: 601  ASETPKPEAKPELLSNLEDVLTLTTPETETIEGSGEREEPTTSAPAAEATSEITLLKSSS 660

Query: 1981 DVAVIENVKRIRPRTEQTHCQQYASCWQTVLDYEQQCDRKYSTEVLSHGIDDSEILNILH 2160
            DVAVIENVKRIRPRTEQTHCQQYASCWQTVLDYEQQCDRKYSTEVLSHGIDDSEILNILH
Sbjct: 661  DVAVIENVKRIRPRTEQTHCQQYASCWQTVLDYEQQCDRKYSTEVLSHGIDDSEILNILH 720

Query: 2161 NSSISHHEIVLKACLRPLDRSVHST 2235
            NSSISHHEIVLKACLRPLDRSVHST
Sbjct: 721  NSSISHHEIVLKACLRPLDRSVHST 745


>gi|39591291|emb|CAE73344.1| Hypothetical protein CBG20775
            [Caenorhabditis briggsae]
          Length = 899

 Score =  907 bits (2343), Expect = 0.0
 Identities = 499/768 (64%), Positives = 532/768 (68%), Gaps = 23/768 (2%)
 Frame = +1

Query: 1    MRXXXXXXXXXXXXPTVIGLKSNRTSCFHYVSCLEATEANLKQCAGGTAISLTLEAKDVN 180
            MR               IG K+NRTSCFHYVSCLEATEANLKQCAGGTAISLTLEAKDVN
Sbjct: 1    MRILAQSLLIASLLTVAIGFKTNRTSCFHYVSCLEATEANLKQCAGGTAISLTLEAKDVN 60

Query: 181  IRDLVKYRALEFVGCQDRLLKEVVDFESLQILVNEDARECFEKLPESSKRVEEFTDSCDY 360
            IRDLVKYRALEFVGCQDRLLKE+VDFE+LQILVNEDARECFEKLPESSKRVE+FTDSCDY
Sbjct: 61   IRDLVKYRALEFVGCQDRLLKEIVDFEALQILVNEDARECFEKLPESSKRVEQFTDSCDY 120

Query: 361  VQPVSRNASKGDALQCLIEFKQDREYCESLLECCPDHTRCGERMNAVSLSYQNARVKAEQ 540
            VQPVSRN+SKGDALQCLIEFKQDREYCESLLECCPDHTRCGERMNAVSLSYQNARVKAEQ
Sbjct: 121  VQPVSRNSSKGDALQCLIEFKQDREYCESLLECCPDHTRCGERMNAVSLSYQNARVKAEQ 180

Query: 541  IVYSMISCIVVNDPRFLREGARLQSLRDPYRNAGVPFLRPDAYTEXXXXXXXXXXXXXXX 720
            IVYSMISCIVVNDPRFLREGARLQSLRDPYRNAGVPFLRPDAYTE
Sbjct: 181  IVYSMISCIVVNDPRFLREGARLQSLRDPYRNAGVPFLRPDAYTEARITRRLALTSTSTL 240

Query: 721  XQRRERFLKKYSQIRQVVAQNLFGQQQ-RLTRPVEDLVTETSSKLA-VXXXXXXXXXXXX 894
             QRRERFLKKYSQIRQVV QNLFGQQQ +L +PVEDLVTETSSKL
Sbjct: 241  SQRRERFLKKYSQIRQVVTQNLFGQQQSKLNQPVEDLVTETSSKLVETPEDVTTTTAPEE 300

Query: 895  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEMHVNTIRNMIRSASEKDLS 1074
                                                  SSEMHVNTIRN+IRSAS+KDLS
Sbjct: 301  VTTPAEMSTTPEETKESETTVVAAEVTEAPEAPEAVKESSEMHVNTIRNLIRSASDKDLS 360

Query: 1075 KYVTLISEGKFSELFELAEQKKLTLTSKFDEKLSSKMAKLKDLINEALSEKEKSGEIEQA 1254
            KYV+LISEGKFSELFELAE+KK+ L +KFDEKLS+KM+KLKDLINEALSEK+KS EIE++
Sbjct: 361  KYVSLISEGKFSELFELAEKKKVNLATKFDEKLSAKMSKLKDLINEALSEKDKSSEIEKS 420

Query: 1255 MEKFEKPEKSELVAMEDKDTPAVFTISD--SXXXXXXXXXXXXTIVSRNVVEAENAIXXX 1428
             EK EK EK ELVAMEDKD+ AVFTISD               TIVSRNV EAENA+
Sbjct: 421  FEKVEKAEKPELVAMEDKDSAAVFTISDELEQKTTLTEAKLAHTIVSRNVAEAENAVAAD 480

Query: 1429 ---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKLPMKIEKLEKPVDTKSENHE 1581
                                                 PGKLP+KIEKLEKP+DTKSEN E
Sbjct: 481  KEEKESEEPKVESKKESEKLAKLEKTEDVKAIADEKKPGKLPLKIEKLEKPIDTKSENQE 540

Query: 1582 LKKVLDDKERALLVESEIKNTAEETKPKVESFKSEETTVAIDDMPALXXXXXXXXXXXXX 1761
            L KVLDDKERALLVESEIKNTA+ETK  +E+ KSEE+ V  +D+PAL
Sbjct: 541  LTKVLDDKERALLVESEIKNTADETKHILETLKSEESAVVGEDLPALEKEESGEAKKEEA 600

Query: 1762 XXXXXXXXXXXXXXXX--------XPKPEAKPELLSNXXXXXXXXXXXXXXIEGSGERXX 1917
                                      KPE+KPEL++N              +EGSGE
Sbjct: 601  TTTTTAPESTTVVAEAVVAETDKPEAKPESKPELVAN-TDDVLTVTKPDTEVEGSGE--- 656

Query: 1918 XXXXXXXXXXXXXXXLLKSS--SDVAVIENVKRIRPRTEQTHCQQYASCWQTVLDYEQQC 2091
                           LL+SS  S   VIENVKRIRPRTEQTHCQQYASCWQTVLDYEQQC
Sbjct: 657  ----GEEDVTTTAPSLLQSSKVSPDGVIENVKRIRPRTEQTHCQQYASCWQTVLDYEQQC 712

Query: 2092 DRKYSTEVLSHGIDDSEILNILHNSSISHHEIVLKACLRPLDRSVHST 2235
            DRKYSTEVLSHGIDDSEILNILHNSSISHHEIVLKACLRPLDRSVHST
Sbjct: 713  DRKYSTEVLSHGIDDSEILNILHNSSISHHEIVLKACLRPLDRSVHST 760




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