Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= E02H1_7
(1337 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|25153085|ref|NP_496066.2| nuclear Hormone Receptor (nhr-19) [... 802 0.0
gi|7498312|pir||T20416 hypothetical protein E02H1.7 - Caenorhabd... 765 0.0
gi|39579409|emb|CAE56399.1| Hypothetical protein CBG24087 [Caeno... 655 0.0
gi|39593498|emb|CAE61790.1| Hypothetical protein CBG05753 [Caeno... 150 7e-35
gi|28396060|gb|AAO39193.1| nuclear receptor NHR-105 [Caenorhabdi... 147 7e-34
gi|32563633|ref|NP_492615.2| nuclear Hormone Receptor (nhr-69) [... 127 8e-28
gi|39595232|emb|CAE60269.1| Hypothetical protein CBG03848 [Caeno... 122 1e-26
gi|7508351|pir||T25211 hypothetical protein T23H4.2 - Caenorhabd... 119 2e-25
gi|39594023|emb|CAE70133.1| Hypothetical protein CBG16594 [Caeno... 115 3e-24
gi|17554350|ref|NP_498554.1| nuclear Hormone Receptor (44.9 kD) ... 114 4e-24
gi|28396008|gb|AAO39167.1| nuclear receptor NHR-1 [Caenorhabditi... 114 4e-24
gi|39597915|emb|CAE68607.1| Hypothetical protein CBG14485 [Caeno... 114 5e-24
gi|28396018|gb|AAO39172.1| nuclear receptor NHR-10 [Caenorhabdit... 114 7e-24
gi|32454391|gb|AAP82997.1| hepatocyte nuclear factor 4alpha [Bos... 113 1e-23
gi|10197991|gb|AAG15130.1| nuclear receptor NHR-35 [Caenorhabdit... 112 2e-23
gi|45645185|sp|Q17771|NH35_CAEEL Nuclear hormone receptor family... 112 2e-23
gi|32566294|ref|NP_508779.3| nuclear Hormone Receptor (54.7 kD) ... 112 2e-23
gi|31077205|ref|NP_000448.3| hepatocyte nuclear factor 4 alpha i... 112 3e-23
gi|2135342|pir||JC4938 hepatocyte nuclear factor 4C - human >gnl... 112 3e-23
gi|6166208|sp|P41235|HN4A_HUMAN Hepatocyte nuclear factor 4-alph... 112 3e-23
gi|2135341|pir||JC4937 hepatocyte nuclear factor 4, splice form ... 112 3e-23
gi|575253|emb|CAA54248.1| hepatocyte nuclear factor 4 [Homo sapi... 112 3e-23
gi|1843522|gb|AAB48082.1| hepatocyte nuclear factor 4-alpha [Hom... 112 3e-23
gi|31077209|ref|NP_849181.1| hepatocyte nuclear factor 4 alpha i... 112 3e-23
gi|31077207|ref|NP_849180.1| hepatocyte nuclear factor 4 alpha i... 112 3e-23
gi|7446193|pir||JC6096 hepatocyte nuclear factor 4 alpha2 chain ... 112 3e-23
gi|1595752|emb|CAA61133.1| Hepatocyte nuclear factor 4A [Homo sa... 112 3e-23
gi|50758697|ref|XP_417376.1| PREDICTED: similar to hepatocyte nu... 111 3e-23
gi|47229086|emb|CAG03838.1| unnamed protein product [Tetraodon n... 111 3e-23
gi|17558526|ref|NP_503435.1| hepatocyte nuclear factor 4 family ... 111 4e-23
gi|35902797|ref|NP_919349.1| hepatocyte nuclear factor 4, alpha ... 111 4e-23
gi|34194038|gb|AAH56550.1| Hnf4a protein [Danio rerio] 111 4e-23
gi|27503338|gb|AAH42224.1| Hnf4-prov protein [Xenopus laevis] 111 4e-23
gi|6016233|sp|Q91766|HN4A_XENLA Hepatocyte nuclear factor 4-alph... 110 6e-23
gi|10198014|gb|AAG15141.1| nuclear receptor NHR-49 [Caenorhabdit... 110 8e-23
gi|10198018|gb|AAG15143.1| nuclear receptor NHR-49 [Caenorhabdit... 110 8e-23
gi|39595230|emb|CAE60267.1| Hypothetical protein CBG03844 [Caeno... 110 8e-23
gi|17508457|ref|NP_492612.1| nuclear Hormone Receptor (52.5 kD) ... 110 8e-23
gi|32563635|ref|NP_871798.1| nuclear Hormone Receptor (55.4 kD) ... 110 8e-23
gi|32563637|ref|NP_871799.1| nuclear Hormone Receptor (nhr-49) [... 110 8e-23
gi|17508459|ref|NP_492613.1| nuclear Hormone Receptor (52.4 kD) ... 110 8e-23
gi|46575916|ref|NP_032287.2| hepatic nuclear factor 4; HNF4 alph... 110 1e-22
gi|11559939|ref|NP_071516.1| hepatocyte nuclear factor 4 alpha; ... 110 1e-22
gi|112415|pir||A36471 transcription factor HNF-4 - rat >gnl|BL_O... 110 1e-22
gi|32699513|sp|Q21878|NHR1_CAEEL Nuclear hormone receptor family... 109 2e-22
gi|31249879|gb|AAP46278.1| Nuclear hormone receptor family prote... 109 2e-22
gi|28396014|gb|AAO39170.1| nuclear receptor NHR-1 [Caenorhabditi... 109 2e-22
gi|227511|prf||1705219A hepatocyte nuclear factor 4 108 2e-22
gi|9453875|dbj|BAB03286.1| hepatocyte nuclear factor 4 [Tamias s... 108 3e-22
gi|1346306|sp|P49698|HN4A_MOUSE Hepatocyte nuclear factor 4-alph... 107 5e-22
gi|7446194|pir||JC6095 hepatocyte nuclear factor 4 gamma chain -... 107 8e-22
gi|39584248|emb|CAE65412.1| Hypothetical protein CBG10365 [Caeno... 106 1e-21
gi|13274556|gb|AAK17977.1| nuclear receptor NHR-49 [Caenorhabdit... 105 2e-21
gi|45430043|ref|NP_991380.1| hepatocyte nuclear factor 4gamma [B... 105 2e-21
gi|40254475|ref|NP_004124.3| hepatocyte nuclear factor 4, gamma ... 104 5e-21
gi|5834598|emb|CAA89990.2| hepatocyte nuclear factor 4 gamma (HN... 103 7e-21
gi|39583438|emb|CAE66413.1| Hypothetical protein CBG11680 [Caeno... 103 7e-21
gi|12644415|sp|Q14541|HN4G_HUMAN Hepatocyte nuclear factor 4-gam... 103 9e-21
gi|47223458|emb|CAF97945.1| unnamed protein product [Tetraodon n... 103 9e-21
gi|7305147|ref|NP_038948.1| hepatocyte nuclear factor 4, gamma [... 102 2e-20
gi|49457135|emb|CAG46888.1| HNF4G [Homo sapiens] 101 4e-20
gi|10720045|sp|Q9WUU6|HN4G_MOUSE Hepatocyte nuclear factor 4-gam... 101 5e-20
gi|17559418|ref|NP_507272.1| hepatocyte nuclear factor 4 family ... 100 6e-20
gi|39596470|emb|CAE63089.1| Hypothetical protein CBG07379 [Caeno... 100 8e-20
gi|7495559|pir||T30101 hypothetical protein C06G3.1 - Caenorhabd... 100 8e-20
gi|17538504|ref|NP_501095.1| nuclear Hormone Receptor (nhr-105) ... 100 8e-20
gi|39595537|emb|CAE60575.1| Hypothetical protein CBG04204 [Caeno... 99 3e-19
gi|17560724|ref|NP_504139.1| nuclear factor 4 homolog family mem... 97 7e-19
gi|17562764|ref|NP_505936.1| nuclear Hormone Receptor (44.8 kD) ... 97 9e-19
gi|28396036|gb|AAO39181.1| nuclear receptor NHR-68 [Caenorhabdit... 97 1e-18
gi|39592867|emb|CAE62481.1| Hypothetical protein CBG06579 [Caeno... 97 1e-18
gi|39591244|emb|CAE73297.1| Hypothetical protein CBG20720 [Caeno... 94 7e-18
gi|32451843|gb|AAH54649.1| Rxrb protein [Danio rerio] 93 1e-17
gi|24308520|ref|NP_571350.1| retinoid x receptor, beta; retinoid... 93 1e-17
gi|39583834|emb|CAE74907.1| Hypothetical protein CBG22776 [Caeno... 92 2e-17
gi|30025114|gb|AAP13776.1| Nuclear hormone receptor family prote... 92 4e-17
gi|44888978|sp|O02151|NH14_CAEEL Nuclear hormone receptor family... 92 4e-17
gi|25513780|pir||H89591 protein T01B10.4 [imported] - Caenorhabd... 92 4e-17
gi|25150304|ref|NP_741860.1| nuclear Hormone Receptor (nhr-14) [... 92 4e-17
gi|18044456|gb|AAH19432.1| Rxrb protein [Mus musculus] 92 4e-17
gi|25150309|ref|NP_741861.1| nuclear Hormone Receptor (nhr-14) [... 92 4e-17
gi|1710720|sp|P49743|RXRB_RAT Retinoic acid receptor RXR-beta (N... 91 6e-17
gi|483195|pir||D41727 retinoid X receptor beta - mouse 91 6e-17
gi|13489062|ref|NP_035436.1| retinoid X receptor beta [Mus muscu... 91 6e-17
gi|109944|pir||A34418 H-2 region II binding protein - mouse (fra... 91 6e-17
gi|112259|pir||A41651 retinoic acid receptor coregulator - rat >... 91 6e-17
gi|285011|pir||S26669 retinoic acid receptor X-beta - mouse >gnl... 91 6e-17
gi|16118883|gb|AAL14642.1| retinoid X receptor beta [Mustela vison] 91 8e-17
gi|33386531|emb|CAD45002.1| retinoid X receptor beta [Takifugu r... 91 8e-17
gi|47225542|emb|CAG12025.1| unnamed protein product [Tetraodon n... 91 8e-17
gi|337720|gb|AAA60293.1| retinoid X receptor beta 91 8e-17
gi|11415052|ref|NP_068811.1| retinoid X receptor, beta; MHC clas... 91 8e-17
gi|542994|pir||S37781 retinoid X receptor beta - human 91 8e-17
gi|34852205|ref|XP_342096.1| similar to Retinoic acid receptor R... 90 1e-16
gi|7709422|gb|AAA40081.2| retinoid X receptor beta [Mus musculus] 90 1e-16
gi|46237552|emb|CAE83933.1| retinoid X receptor beta [Rattus nor... 90 1e-16
gi|17553874|ref|NP_497126.1| nuclear Hormone Receptor (55.1 kD) ... 90 1e-16
gi|21629462|gb|AAM69090.1| Nuclear hormone receptor family prote... 90 1e-16
gi|32564284|ref|NP_871630.1| nuclear Hormone Receptor (nhr-80) [... 90 1e-16
gi|1710719|sp|P51128|RXRA_XENLA Retinoic acid receptor RXR-alpha 89 2e-16
gi|7511656|pir||T34093 steroid/thyroid/retinoic nuclear hormone ... 89 3e-16
gi|18157523|dbj|BAB83838.1| partially supported by GENSCAN and G... 88 4e-16
gi|32566248|ref|NP_505935.2| nuclear Hormone Receptor (45.2 kD) ... 88 4e-16
gi|283824|pir||C41977 retinoid receptor alpha - African clawed frog 88 5e-16
gi|1685271|gb|AAB36777.1| RXR alpha 2 [Mus musculus] >gnl|BL_ORD... 87 1e-15
gi|6755384|ref|NP_035435.1| retinoid X receptor alpha; RXR alpha... 87 1e-15
gi|6981496|ref|NP_036937.1| retinoid X receptor alpha [Rattus no... 87 1e-15
gi|39645799|gb|AAH63827.1| RXRA protein [Homo sapiens] 86 2e-15
gi|28396052|gb|AAO39189.1| nuclear receptor NHR-101 [Caenorhabdi... 86 2e-15
gi|4003528|gb|AAC95154.1| retinoic acid receptor RXR [Cloning ve... 86 2e-15
gi|4506755|ref|NP_002948.1| retinoid X receptor, alpha [Homo sap... 86 2e-15
gi|9931482|gb|AAG02188.1| retinoid-X-receptor [Cloning vector pF... 86 2e-15
gi|39584244|emb|CAE65408.1| Hypothetical protein CBG10360 [Caeno... 86 2e-15
gi|39588802|emb|CAE58326.1| Hypothetical protein CBG01439 [Caeno... 86 3e-15
gi|25145216|ref|NP_497559.2| nuclear Hormone Receptor (53.0 kD) ... 86 3e-15
gi|7498325|pir||T33599 hypothetical protein E02H9.8 - Caenorhabd... 86 3e-15
gi|8478106|sp|Q90416|RXRA_BRARE RETINOIC ACID RECEPTOR RXR-ALPHA... 85 3e-15
gi|41282088|ref|NP_571292.2| retinoid x receptor, alpha; retinoi... 85 3e-15
gi|19386469|gb|AAL86461.1| RXR-like protein [Biomphalaria glabrata] 84 6e-15
gi|18859345|ref|NP_571228.1| retinoid x receptor, gamma; etID309... 84 1e-14
gi|1583309|prf||2120366D retinoid X receptor:ISOTYPE=gamma 84 1e-14
gi|39588163|emb|CAE68087.1| Hypothetical protein CBG13722 [Caeno... 83 1e-14
gi|34880904|ref|XP_341152.1| retinoid X receptor gamma [Rattus n... 83 1e-14
gi|39592119|emb|CAE75339.1| Hypothetical protein CBG23319 [Caeno... 83 2e-14
gi|1710810|sp|P51129|RXRG_XENLA RETINOIC ACID RECEPTOR RXR-GAMMA... 82 2e-14
gi|39588847|emb|CAE69477.1| Hypothetical protein CBG15675 [Caeno... 82 3e-14
gi|2895868|gb|AAC03056.1| ultraspiracle [Chironomus tentans] 80 1e-13
gi|39595242|emb|CAE60279.1| Hypothetical protein CBG03860 [Caeno... 79 2e-13
gi|49114890|gb|AAH73179.1| Rxrb-A-prov protein [Xenopus laevis] 79 2e-13
gi|39587327|emb|CAE74981.1| Hypothetical protein CBG22874 [Caeno... 78 4e-13
gi|13274563|gb|AAK17980.1| nuclear receptor NHR-80 [Caenorhabdit... 77 7e-13
gi|29351682|gb|AAH49301.1| Rara2b protein [Danio rerio] 77 1e-12
gi|49258498|pdb|1PZL|A Chain A, Crystal Structure Of Hnf4a Lbd I... 77 1e-12
gi|39584683|emb|CAE72436.1| Hypothetical protein CBG19603 [Caeno... 77 1e-12
gi|50539758|ref|NP_001002345.1| zgc:92183 [Danio rerio] >gnl|BL_... 76 2e-12
gi|215026|gb|AAA50050.1| retinoic acid receptor alpha-2.B 76 2e-12
gi|47213822|emb|CAF95413.1| unnamed protein product [Tetraodon n... 75 3e-12
gi|39585773|emb|CAE59975.1| Hypothetical protein CBG03466 [Caeno... 75 3e-12
gi|39588891|emb|CAE69521.1| Hypothetical protein CBG15730 [Caeno... 75 3e-12
gi|234371|gb|AAB19628.1| retinoic acid receptor-beta; RAR-beta [... 75 5e-12
gi|16797876|gb|AAL29196.1| nuclear receptor AmNR4 isoform A [Acr... 75 5e-12
gi|33357317|pdb|1M7W|A Chain A, Hnf4a Ligand Binding Domain With... 75 5e-12
gi|16797878|gb|AAL29197.1| nuclear receptor AmNR4 isoform B [Acr... 75 5e-12
gi|17541660|ref|NP_502856.1| nuclear Hormone Receptor (nhr-5) [C... 74 6e-12
gi|32563886|ref|NP_494413.2| nuclear Hormone Receptor (64.1 kD) ... 74 6e-12
gi|18031835|gb|AAL02361.1| retinoic acid receptor beta-2 [Mesocr... 74 6e-12
gi|10198089|gb|AAG15179.1| nuclear receptor NHR-88 [Caenorhabdit... 74 6e-12
gi|27669076|gb|AAO21381.1| Nuclear hormone receptor family prote... 74 6e-12
gi|39752847|gb|AAR30203.1| Nuclear hormone receptor family prote... 74 6e-12
gi|47940249|gb|AAH72132.1| RXR<beta> protein [Xenopus laevis] 74 8e-12
gi|16797872|gb|AAL29194.1| nuclear receptor AmNR2 [Acropora mill... 74 8e-12
gi|280730|pir||A43786 retinoic acid receptor beta-4 - chicken >g... 74 8e-12
gi|39593153|emb|CAE64622.1| Hypothetical protein CBG09380 [Caeno... 74 8e-12
gi|17367843|sp|Q9W6B3|RRB_COTJA Retinoic acid receptor beta (RAR... 74 8e-12
gi|45384512|ref|NP_990657.1| retinoic acid receptor beta [Gallus... 74 1e-11
gi|104852|pir||S13512 retinoic acid receptor beta-1 - chicken >g... 74 1e-11
gi|6016234|sp|P79926|HN4B_XENLA Hepatocyte nuclear factor 4-beta... 74 1e-11
gi|62979|emb|CAA40615.1| retinoic acid receptor beta,isoform 4 [... 73 1e-11
gi|226278|prf||1504304A retinoic acid receptor 73 1e-11
gi|62977|emb|CAA40616.1| retinoic acid receptor beta [Gallus gal... 73 1e-11
gi|35883|emb|CAA30262.1| unnamed protein product [Homo sapiens] 73 1e-11
gi|2148007|pir||I51256 retinoic acid receptor alpha - zebra fish... 73 2e-11
gi|24638448|ref|NP_571481.1| retinoic acid receptor alpha-2.A; z... 73 2e-11
gi|32026|emb|CAA68398.1| unnamed protein product [Homo sapiens] 73 2e-11
gi|16797886|gb|AAL29201.1| nuclear receptor AmNR8 [Acropora mill... 73 2e-11
gi|133494|sp|P22605|RRB_MOUSE Retinoic acid receptor beta (RAR-b... 73 2e-11
gi|840922|emb|CAA60792.1| retinoid X receptor beta [Xenopus laevis] 72 2e-11
gi|17380507|sp|P10826|RRB_HUMAN Retinoic acid receptor beta (RAR... 72 3e-11
gi|7500322|pir||T21645 hypothetical protein F32B6.1 - Caenorhabd... 72 3e-11
gi|14916494|ref|NP_000956.2| retinoic acid receptor, beta isofor... 72 3e-11
gi|17541658|ref|NP_501775.1| nuclear Hormone Receptor (55.5 kD) ... 72 3e-11
gi|39586596|emb|CAE73723.1| Hypothetical protein CBG21242 [Caeno... 72 4e-11
gi|34855527|ref|XP_345189.1| similar to hepatocyte nuclear facto... 71 5e-11
gi|45593124|ref|NP_035373.1| retinoic acid receptor, beta; RAR b... 71 5e-11
gi|31241051|ref|XP_320944.1| ENSANGP00000017626 [Anopheles gambi... 71 7e-11
gi|28396028|gb|AAO39177.1| nuclear receptor NHR-64 [Caenorhabdit... 71 7e-11
gi|17508463|ref|NP_491103.1| nuclear Hormone Receptor (nhr-64) [... 71 7e-11
gi|28396030|gb|AAO39178.1| nuclear receptor NHR-64 [Caenorhabdit... 71 7e-11
gi|28396026|gb|AAO39176.1| nuclear receptor NHR-64 [Caenorhabdit... 71 7e-11
gi|226050|prf||1408258A retinoic acid receptor 71 7e-11
gi|47270772|gb|AAT27251.1| Nuclear hormone receptor family prote... 71 7e-11
gi|2661449|emb|CAA05769.1| retinoic acid receptor beta2 [Rattus ... 70 9e-11
gi|10198012|gb|AAG15140.1| nuclear receptor NHR-49 [Caenorhabdit... 70 9e-11
gi|7496412|pir||T33174 hypothetical protein C24G6.4 - Caenorhabd... 70 9e-11
gi|17562738|ref|NP_504455.1| nuclear Hormone Receptor (64.6 kD) ... 70 9e-11
gi|1173170|sp|P18516|RRG_NOTVI Retinoic acid receptor gamma (RAR... 70 9e-11
gi|1085220|pir||S47633 RXR protein - African clawed frog >gnl|BL... 70 9e-11
gi|1843450|emb|CAA49562.1| largest of the predicted retinoic aci... 70 9e-11
gi|85682|pir||S06124 retinoic acid receptor delta - eastern newt... 70 9e-11
gi|45387535|ref|NP_991109.1| Unknown (protein for MGC:77387); wu... 70 9e-11
gi|4972008|emb|CAB43871.1| retinoic acid receptor alpha-2 [Takif... 70 1e-10
gi|17367840|sp|Q9W5Z3|RRA_FUGRU Retinoic acid receptor alpha (RA... 70 1e-10
gi|47216868|emb|CAG11675.1| unnamed protein product [Tetraodon n... 70 1e-10
gi|47226025|emb|CAG04399.1| unnamed protein product [Tetraodon n... 70 1e-10
gi|47228660|emb|CAG07392.1| unnamed protein product [Tetraodon n... 70 1e-10
gi|8895462|gb|AAF80975.1| retonoic acid receptor gamma 2 [Ambyst... 70 1e-10
gi|27573799|pdb|1LV2|A Chain A, Hepatocyte Nuclear Factor 4 Is A... 69 2e-10
gi|8895460|gb|AAF80974.1| retinoic acid receptor gamma 1 [Ambyst... 69 3e-10
gi|225858|prf||1401244A thyroid/steroid receptor related gene 69 3e-10
gi|50753926|ref|XP_414182.1| PREDICTED: similar to hepatocyte nu... 69 3e-10
gi|23504267|emb|CAA52153.2| retinoic acid receptor gamma 2 isofo... 69 3e-10
gi|32566288|ref|NP_741920.2| nuclear Hormone Receptor (66.7 kD) ... 68 4e-10
gi|10198079|gb|AAG15174.1| nuclear receptor NHR-71 [Caenorhabdit... 68 4e-10
gi|7505785|pir||T22740 hypothetical protein K11E4.5 - Caenorhabd... 68 4e-10
gi|25513479|pir||B89694 protein K11E4.5 [imported] - Caenorhabdi... 68 4e-10
gi|14530474|emb|CAB04481.3| Hypothetical protein K11E4.5 [Caenor... 68 4e-10
gi|24308525|ref|NP_571414.1| retinoic acid receptor gamma; etID3... 68 6e-10
gi|15489203|gb|AAH13709.1| Rarg protein [Mus musculus] 68 6e-10
gi|215028|gb|AAB59953.1| retinoic acid receptor gamma-2 68 6e-10
gi|40353037|gb|AAH64524.1| Unknown (protein for IMAGE:5738222) [... 67 7e-10
gi|33879052|gb|AAH19098.2| RARG protein [Homo sapiens] 67 7e-10
gi|4506423|ref|NP_000957.1| retinoic acid receptor, gamma; retin... 67 7e-10
gi|31560805|ref|NP_035374.2| retinoic acid receptor, gamma; RAR ... 67 7e-10
gi|7441781|pir||A34714 retinoic acid receptor gamma-1 - mouse >g... 67 7e-10
gi|39592118|emb|CAE75338.1| Hypothetical protein CBG23318 [Caeno... 67 7e-10
gi|47938910|gb|AAH72462.1| RARG protein [Homo sapiens] 67 7e-10
gi|133501|sp|P20787|RRG2_MOUSE Retinoic acid receptor gamma-B (R... 67 7e-10
gi|34868575|ref|XP_217064.2| similar to retinoic acid receptor g... 67 7e-10
gi|28558767|sp|P28699|RRG_XENLA Retinoic acid receptor gamma (RA... 67 7e-10
gi|104175|pir||A38592 retinoic acid receptor gamma-2 - African c... 67 7e-10
gi|1839486|gb|AAB47115.1| retinoic acid receptor gamma isoform 2... 67 7e-10
gi|1839488|gb|AAB47116.1| retinoic acid receptor gamma isoform 2... 67 7e-10
gi|18031837|gb|AAL02362.1| retinoic acid receptor gamma-2 [Mesoc... 67 7e-10
gi|133500|sp|P22932|RRG2_HUMAN Retinoic acid receptor gamma-2 (R... 67 7e-10
gi|6433866|emb|CAB60726.1| retinoic acid receptor [Homo sapiens] 67 1e-09
gi|8895467|gb|AAF80976.1| retonoic acid receptor gamma 2I [Ambys... 67 1e-09
gi|50731740|ref|XP_425924.1| PREDICTED: similar to hepatocyte nu... 67 1e-09
gi|7638251|gb|AAF65452.1| ECFP-retinoic acid receptor alpha fusi... 67 1e-09
gi|28396079|gb|AAO39201.1| nuclear receptor NHR-114 [Caenorhabdi... 67 1e-09
gi|17565736|ref|NP_504164.1| nuclear Hormone Receptor (nhr-114) ... 67 1e-09
gi|17568425|ref|NP_510423.1| nuclear Hormone Receptor (51.3 kD) ... 67 1e-09
gi|4506419|ref|NP_000955.1| retinoic acid receptor, alpha; Retin... 67 1e-09
gi|4160009|gb|AAD05222.1| retinoic acid receptor alpha [Homo sap... 67 1e-09
gi|35874|emb|CAA29787.1| unnamed protein product [Homo sapiens] 67 1e-09
gi|28396083|gb|AAO39203.1| nuclear receptor NHR-114 [Caenorhabdi... 67 1e-09
gi|7441783|pir||S78481 retinoic acid receptor alpha-2 - eastern ... 67 1e-09
gi|27960450|gb|AAO27833.1| nuclear receptor protein [Caenorhabdi... 67 1e-09
gi|133488|sp|P18514|RRA_NOTVI Retinoic acid receptor alpha (RAR-... 67 1e-09
gi|1498066|gb|AAB06335.1| nuclear orphan receptor 67 1e-09
gi|1743345|emb|CAA71177.1| retinoic acid receptor-alpha [Mus spr... 66 2e-09
gi|13928712|ref|NP_113716.1| retinoic acid receptor, alpha [Ratt... 66 2e-09
gi|1314308|gb|AAB00112.1| nucleophosmin-retinoic acid receptor a... 66 2e-09
gi|12643728|sp|Q15406|NR61_HUMAN Orphan nuclear receptor NR6A1 (... 66 2e-09
gi|47939545|gb|AAH71733.1| Unknown (protein for MGC:88071) [Homo... 66 2e-09
gi|545176|gb|AAB29813.1| retinoic acid receptor alpha, RAR alpha... 66 2e-09
gi|45383107|ref|NP_989867.1| retinoic acid receptor alpha 1 isof... 66 2e-09
gi|133495|sp|P18515|RRB_NOTVI RETINOIC ACID RECEPTOR BETA (RAR-B... 66 2e-09
gi|2661445|emb|CAA05767.1| retinoic acid receptor alpha1 [Rattus... 66 2e-09
gi|2119682|pir||I50674 retinoic acid receptor alpha isoform 2-1 ... 66 2e-09
gi|18031833|gb|AAL02360.1| retinoic acid receptor alpha [Mesocri... 66 2e-09
gi|3098334|gb|AAC15588.1| retinoid X receptor [Amblyomma america... 66 2e-09
gi|22859106|emb|CAA55132.1| retinoic acid receptor alpha isoform... 66 2e-09
gi|3510458|gb|AAC33511.1| nuclear mitotic apparatus protein-reti... 66 2e-09
gi|2119680|pir||B56558 retinoic acid receptor isoform alpha 2.2 ... 66 2e-09
gi|1314310|gb|AAB00113.1| nucleophosmin-retinoic acid receptor a... 66 2e-09
gi|8815561|gb|AAB19602.2| retinoic acid receptor alpha; RAR alph... 66 2e-09
gi|2661447|emb|CAA05768.1| retinoic acid receptor alpha2 [Rattus... 66 2e-09
gi|190125|gb|AAA60126.1| PML-RAR protein 66 2e-09
gi|14090242|dbj|BAB55582.1| seven-up alpha [Bombyx mori] 66 2e-09
gi|2119679|pir||A56558 retinoic acid receptor isoform alpha 2.1 ... 66 2e-09
gi|3046863|dbj|BAA25569.1| retinoic acid receptor homologue [Pol... 66 2e-09
gi|2780196|emb|CAA11109.1| retinoic acid X receptor gamma-1 [Rat... 66 2e-09
gi|25396452|pir||G89050 protein T05C3.1 [imported] - Caenorhabdi... 66 2e-09
gi|19919404|gb|AAM08268.1| nuclear receptor RXR [Dirofilaria imm... 66 2e-09
gi|28396081|gb|AAO39202.1| nuclear receptor NHR-114 [Caenorhabdi... 66 2e-09
gi|21310107|gb|AAM46149.1| retinoic acid receptor [Branchiostoma... 66 2e-09
gi|40807137|gb|AAH65330.1| Zgc:77259 protein [Danio rerio] 66 2e-09
gi|3608382|gb|AAC72725.1| nuclear transcription factor 4 homolog... 65 3e-09
gi|39587949|emb|CAE67968.1| Hypothetical protein CBG13574 [Caeno... 65 3e-09
gi|39579854|emb|CAE56733.1| Hypothetical protein CBG24522 [Caeno... 65 3e-09
gi|3608380|gb|AAC72724.1| nuclear transcription factor 4 homolog... 65 3e-09
gi|3608378|gb|AAC72723.1| nuclear transcription factor 4 homolog... 65 3e-09
gi|7506532|pir||T28881 hypothetical protein R09G11.2 - Caenorhab... 65 3e-09
gi|28396058|gb|AAO39192.1| nuclear receptor NHR-104 [Caenorhabdi... 65 4e-09
gi|25012937|gb|AAN71555.1| RH29074p [Drosophila melanogaster] 65 4e-09
gi|18858747|ref|NP_571331.1| nuclear receptor subfamily 6, group... 65 4e-09
gi|7506639|pir||T33747 hypothetical protein R11E3.5 - Caenorhabd... 65 4e-09
gi|133484|sp|P11416|RRA_MOUSE Retinoic acid receptor alpha (RAR-... 65 4e-09
gi|25149143|ref|NP_741385.1| nuclear Hormone Receptor (28.2 kD) ... 65 4e-09
gi|283822|pir||A41977 retinoic acid receptor alpha - African cla... 65 4e-09
gi|24582909|ref|NP_723413.1| CG9310-PB [Drosophila melanogaster]... 65 4e-09
gi|24582911|ref|NP_723414.1| CG9310-PC [Drosophila melanogaster]... 65 4e-09
gi|480042|pir||S36218 hepatocyte nuclear factor 4 - fruit fly (D... 65 4e-09
gi|25149140|ref|NP_741384.1| nuclear Hormone Receptor (45.8 kD) ... 65 4e-09
gi|25147899|ref|NP_510834.2| nuclear Hormone Receptor (nhr-1) [C... 65 4e-09
gi|24582907|ref|NP_476887.2| CG9310-PA [Drosophila melanogaster]... 65 4e-09
gi|1710711|sp|P51126|RRA_XENLA Retinoic acid receptor alpha (RAR... 65 4e-09
gi|53891|emb|CAA40749.1| retinoic acid receptor-alpha [Mus muscu... 65 4e-09
gi|47214969|emb|CAG01303.1| unnamed protein product [Tetraodon n... 65 5e-09
gi|15451848|ref|NP_201591.1| nuclear receptor subfamily 6, group... 65 5e-09
gi|6677671|ref|NP_033050.1| retinoic acid receptor, alpha; RAR a... 65 5e-09
gi|39587954|emb|CAE67973.1| Hypothetical protein CBG13579 [Caeno... 65 5e-09
gi|8118613|gb|AAF73057.1| ultraspiracle protein; RXR [Apis melli... 65 5e-09
gi|48102185|ref|XP_392751.1| similar to ultraspiracle protein; R... 65 5e-09
gi|31249880|gb|AAP46279.1| Nuclear hormone receptor family prote... 64 6e-09
gi|7503364|pir||T31790 hypothetical protein F44C8.5 - Caenorhabd... 64 6e-09
gi|39596578|emb|CAE63197.1| Hypothetical protein CBG07552 [Caeno... 64 8e-09
gi|20806167|ref|NP_620813.1| nuclear receptor subfamily 2, group... 64 8e-09
gi|226404|prf||1510302C retinoic acid receptor gamma 64 8e-09
gi|10946385|gb|AAG24887.1| ultraspiracle isoform-B [Aedes aegypti] 64 1e-08
gi|31746686|gb|AAC02558.2| Hypothetical protein C05G6.1 [Caenorh... 64 1e-08
gi|25148057|ref|NP_741464.1| nuclear Hormone Receptor (nhr-66) [... 64 1e-08
gi|10198067|gb|AAG15168.1| nuclear receptor NHR-66 [Caenorhabdit... 64 1e-08
gi|10946383|gb|AAG24886.1| ultraspiracle isoform-A [Aedes aegypti] 64 1e-08
gi|6753956|ref|NP_034394.1| nuclear receptor subfamily 6, group ... 64 1e-08
gi|39583189|emb|CAE61407.1| Hypothetical protein CBG05270 [Caeno... 64 1e-08
gi|25148054|ref|NP_741463.1| nuclear Hormone Receptor (nhr-66) [... 64 1e-08
gi|39590909|emb|CAE58689.1| Hypothetical protein CBG01866 [Caeno... 64 1e-08
gi|20126654|dbj|BAB88907.1| seven-up beta [Bombyx mori] 63 1e-08
gi|47217403|emb|CAG00763.1| unnamed protein product [Tetraodon n... 63 1e-08
gi|10198045|gb|AAG15157.1| nuclear receptor NHR-60 [Caenorhabdit... 63 2e-08
gi|10198069|gb|AAG15169.1| nuclear receptor NHR-66 [Caenorhabdit... 63 2e-08
gi|8096|emb|CAA36827.1| unnamed protein product [Drosophila mela... 63 2e-08
gi|33943632|gb|AAQ55495.1| NHR-41B [Caenorhabditis elegans] 63 2e-08
gi|25148061|ref|NP_741462.1| nuclear Hormone Receptor (nhr-66) [... 63 2e-08
gi|7507499|pir||T33028 hypothetical protein T09A12.4 - Caenorhab... 63 2e-08
gi|17136580|ref|NP_476781.1| CG4380-PA [Drosophila melanogaster]... 63 2e-08
gi|6601567|gb|AAF19033.1| ultraspiracle [Aedes albopictus] 63 2e-08
gi|15451850|ref|NP_201592.1| nuclear receptor subfamily 6, group... 63 2e-08
gi|34853889|ref|XP_342428.1| similar to germ cell nuclear factor... 63 2e-08
gi|15451846|ref|NP_001480.2| nuclear receptor subfamily 6, group... 63 2e-08
gi|33943630|gb|AAQ55494.1| NHR-41A [Caenorhabditis elegans] 63 2e-08
gi|21040480|gb|AAH30600.1| Nuclear receptor subfamily 6, group A... 63 2e-08
gi|45477170|sp|Q9N4B8|NH41_CAEEL Nuclear hormone receptor family... 63 2e-08
gi|103409|pir||A35872 steroid hormone receptor-like related prot... 63 2e-08
gi|5902068|ref|NP_008848.1| retinoid X receptor, gamma [Homo sap... 63 2e-08
gi|6677829|ref|NP_033133.1| retinoid X receptor gamma [Mus muscu... 63 2e-08
gi|285012|pir||S26670 retinoic acid receptor X-gamma - mouse >gn... 63 2e-08
gi|48139397|ref|XP_396999.1| similar to photoreceptor-specific n... 63 2e-08
gi|1515433|gb|AAC60126.1| xGCNF 62 2e-08
gi|47086055|ref|NP_998404.1| zgc:77260 [Danio rerio] >gnl|BL_ORD... 62 2e-08
gi|25150534|ref|NP_509713.2| nuclear Hormone Receptor, X-chromos... 62 2e-08
gi|10198107|gb|AAG15187.1| sex-1 [Caenorhabditis elegans] 62 2e-08
gi|2133483|pir||I45066 steroid hormone receptor CNR14 - Caenorha... 62 2e-08
gi|33468584|emb|CAE30390.1| SI:zC167P9.1 (novel protein similar ... 62 2e-08
gi|25152449|ref|NP_510201.2| nuclear Hormone Receptor (nhr-32) [... 62 2e-08
gi|20086768|gb|AAM10633.1| pregnane X receptor [Macaca mulatta] 62 2e-08
gi|28396020|gb|AAO39173.1| nuclear receptor NHR-32 [Caenorhabdit... 62 2e-08
gi|6434284|emb|CAB61000.1| Hypothetical protein F44A6.2b [Caenor... 62 2e-08
gi|39587500|emb|CAE58438.1| Hypothetical protein CBG01574 [Caeno... 62 2e-08
gi|7505608|pir||T23520 hypothetical protein K08H2.8 - Caenorhabd... 62 2e-08
gi|3098336|gb|AAC15589.1| retinoid X receptor [Amblyomma america... 62 2e-08
gi|39590178|emb|CAE61176.1| Hypothetical protein CBG04944 [Caeno... 62 2e-08
gi|21464746|gb|AAM54498.1| hormone receptor 4 [Trichoplusia ni] 62 3e-08
gi|11863132|ref|NP_071285.1| pregnane X receptor isoform 2; ster... 62 3e-08
gi|34398348|ref|NP_003880.3| pregnane X receptor isoform 1l; ste... 62 3e-08
gi|47216397|emb|CAG01948.1| unnamed protein product [Tetraodon n... 62 3e-08
gi|14702164|ref|NP_148934.1| pregnane X receptor isoform 3; ster... 62 3e-08
gi|14198162|gb|AAH08138.1| Nr2f6 protein [Mus musculus] 62 3e-08
gi|17562874|ref|NP_505588.1| nuclear receptor NHR-10 family memb... 62 3e-08
gi|40886675|gb|AAR96256.1| retinoid X receptor gamma [Sus scrofa] 62 3e-08
gi|17562760|ref|NP_506930.1| nuclear Hormone Receptor (nhr-60) [... 62 4e-08
gi|6753768|ref|NP_034280.1| nuclear receptor subfamily 2, group ... 62 4e-08
gi|1169455|sp|P43136|EAR2_MOUSE Orphan nuclear receptor EAR-2 (V... 62 4e-08
gi|2734850|gb|AAB93762.1| hepatocyte nuclear factor 4 isoform a 62 4e-08
gi|33943178|gb|AAQ55293.1| nuclear receptor RXR-l [Locusta migra... 62 4e-08
gi|39584265|emb|CAE65429.1| Hypothetical protein CBG10390 [Caeno... 62 4e-08
gi|4322668|gb|AAD16119.1| retinoic acid receptor RXR [Schistosom... 62 4e-08
gi|2734852|gb|AAB93763.1| hepatocyte nuclear factor 4 isoform b 62 4e-08
gi|6983809|emb|CAB75361.1| USP protein [Tenebrio molitor] 62 4e-08
gi|6007621|gb|AAF00981.1| RXR [Locusta migratoria] 62 4e-08
gi|17543294|ref|NP_500109.1| nuclear Hormone Receptor (nhr-122) ... 62 4e-08
gi|38197463|gb|AAH02669.2| NR2F6 protein [Homo sapiens] 61 5e-08
gi|20070199|ref|NP_005225.2| nuclear receptor subfamily 2, group... 61 5e-08
gi|5852068|emb|CAB55493.1| nuclear hormone receptor PRR2-C [Homo... 61 5e-08
gi|5852063|emb|CAB55489.1| nuclear hormone receptor PRR1-A [Homo... 61 5e-08
gi|38614465|gb|AAH63018.1| NR2F6 protein [Homo sapiens] 61 5e-08
gi|2135648|pir||I38104 MHC class I promoter binding protein - hu... 61 5e-08
gi|5852067|emb|CAB55492.1| nuclear hormone receptor PRR2-A [Homo... 61 5e-08
gi|5852064|emb|CAB55490.1| nuclear hormone receptor PRR1-C [Homo... 61 5e-08
gi|49259353|pdb|1UHL|A Chain A, Crystal Structure Of The Lxralfa... 61 5e-08
gi|49250456|gb|AAH74651.1| Unknown (protein for MGC:69386) [Xeno... 61 5e-08
gi|33416678|gb|AAH56043.1| Nr2f6-prov protein [Xenopus laevis] 61 5e-08
gi|87346|pir||S02709 ear-2 protein - human >gnl|BL_ORD_ID|871512... 61 7e-08
gi|17979668|gb|AAL50350.1| hormone receptor 4 [Manduca sexta] 61 7e-08
gi|5059065|gb|AAD38900.1| nuclear receptor GRF [Bombyx mori] 60 9e-08
gi|45708743|gb|AAH51670.1| NR2C2 protein [Homo sapiens] 60 9e-08
gi|17559592|ref|NP_504213.1| nuclear Hormone Receptor (nhr-118) ... 60 9e-08
gi|17136822|ref|NP_476933.1| CG8676-PC [Drosophila melanogaster]... 60 9e-08
gi|17535329|ref|NP_497074.1| nuclear Hormone Receptor (46.5 kD) ... 60 9e-08
gi|4165446|emb|CAA22836.1| EG:133E12.2 [Drosophila melanogaster] 60 9e-08
gi|45553962|ref|NP_996331.1| CG16902-PB [Drosophila melanogaster... 60 9e-08
gi|39579221|emb|CAE56632.1| Hypothetical protein CBG24390 [Caeno... 60 9e-08
gi|24639230|ref|NP_569967.2| CG16902-PA [Drosophila melanogaster... 60 9e-08
gi|10198051|gb|AAG15160.1| nuclear receptor NHR-61 [Caenorhabdit... 60 9e-08
gi|17136820|ref|NP_476932.1| CG8676-PA [Drosophila melanogaster]... 60 9e-08
gi|12644385|sp|Q05192|FTFB_DROME Nuclear hormone receptor FTZ-F1... 60 9e-08
gi|290226|gb|AAA28543.1| steroid receptor 60 9e-08
gi|28974300|gb|AAO61416.1| COUP-TF [Branchiostoma floridae] 60 9e-08
gi|47199347|emb|CAF88861.1| unnamed protein product [Tetraodon n... 60 1e-07
gi|22475175|gb|AAM95452.1| germ cell nuclear factor [Xenopus lae... 60 1e-07
gi|14624971|gb|AAG01569.1| ultraspiracle protein [Lucilia cuprina] 60 1e-07
gi|44885904|dbj|BAD12053.1| ultraspiracle protein [Lucilia seric... 60 1e-07
gi|39585457|emb|CAE70540.1| Hypothetical protein CBG17178 [Caeno... 60 1e-07
gi|18202151|sp|O76202|USP_CHOFU Ultraspiracle protein homolog >g... 60 1e-07
gi|48475404|gb|AAT44330.1| USP [Plodia interpunctella] 60 1e-07
gi|21464744|gb|AAM54497.1| ultraspiracle protein [Trichoplusia ni] 60 1e-07
gi|13699898|gb|AAC32789.2| retinoid X receptor homolog [Celuca p... 60 1e-07
gi|18859343|ref|NP_571313.1| retinoid x receptor, delta; retinoi... 60 1e-07
gi|386369|gb|AAB27245.1| retinoid-X receptor-gamma isoform 2; mR... 60 1e-07
gi|9955273|pdb|1DSZ|A Chain A, Structure Of The RxrRAR DNA-Bindi... 60 2e-07
gi|1345734|sp|P49700|USP_BOMMO Ultraspiracle protein homolog (RX... 60 2e-07
gi|2136283|pir||I59309 TR4 orphan receptor - human >gnl|BL_ORD_I... 60 2e-07
gi|36950991|ref|NP_003289.2| nuclear receptor subfamily 2, group... 60 2e-07
gi|2500906|sp|Q24142|HR78_DROME NUCLEAR HORMONE RECEPTOR HR78 (D... 60 2e-07
gi|24668103|ref|NP_730636.1| CG7199-PB [Drosophila melanogaster]... 60 2e-07
gi|951325|gb|AAC46924.1| nuclear receptor XR78E/F 60 2e-07
gi|27372315|dbj|BAC53670.1| ultraspiracle [Chilo suppressalis] 60 2e-07
gi|50754654|ref|XP_414462.1| PREDICTED: similar to type II zinc ... 60 2e-07
gi|21464740|gb|AAM54495.1| ultraspiracle protein [Spodoptera fru... 60 2e-07
gi|2143463|pir||I54075 gene mTR2R1 protein - mouse >gnl|BL_ORD_I... 60 2e-07
gi|1351190|sp|P49116|TR4_HUMAN Orphan nuclear receptor TR4 (Orph... 60 2e-07
gi|1351191|sp|P49117|TR4_MOUSE Orphan nuclear receptor TR4 (Orph... 60 2e-07
gi|39597700|emb|CAE68391.1| Hypothetical protein CBG14155 [Caeno... 60 2e-07
gi|8394483|ref|NP_059019.1| TR4 orphan receptor; orphan receptor... 60 2e-07
gi|6318676|gb|AAF06997.1| nuclear hormone receptor [Onchocerca v... 60 2e-07
gi|48102347|ref|XP_392769.1| similar to nuclear receptor [Apis m... 60 2e-07
gi|39598310|emb|CAE69003.1| Hypothetical protein CBG14996 [Caeno... 60 2e-07
gi|5353742|gb|AAD42224.1| COUP transcription factor 1 [Xenopus l... 60 2e-07
gi|25154168|ref|NP_503561.2| nuclear Hormone Receptor (nhr-86) [... 59 2e-07
gi|3891396|pdb|1RXR| High Resolution Solution Structure Of The ... 59 2e-07
gi|3127936|emb|CAA06690.1| nuclear receptor [Tenebrio molitor] 59 2e-07
gi|7504432|pir||T29238 hypothetical protein F56E3.4 - Caenorhabd... 59 2e-07
gi|1049076|gb|AAC29502.1| TR2 [Mus musculus] >gnl|BL_ORD_ID|1608... 59 2e-07
gi|31982760|ref|NP_035759.2| nuclear receptor subfamily 2, group... 59 2e-07
gi|14133772|gb|AAK54127.1| nuclear receptor nhr-7A [Dirofilaria ... 59 2e-07
gi|2133484|pir||I45067 steroid hormone receptor family member CN... 59 2e-07
gi|25151487|ref|NP_740888.1| nuclear Hormone Receptor, regulates... 59 2e-07
gi|34555893|emb|CAC70072.3| Hypothetical protein C28D4.9 [Caenor... 59 2e-07
gi|10198083|gb|AAG15176.1| nuclear receptor NHR-86 [Caenorhabdit... 59 2e-07
gi|17568335|ref|NP_508547.1| defective FAsciculation of aXons FA... 59 2e-07
gi|10198081|gb|AAG15175.1| nuclear receptor NHR-86 [Caenorhabdit... 59 2e-07
gi|4583413|gb|AAD25074.1| androgen receptor [Astatotilapia burtoni] 59 2e-07
gi|39582781|emb|CAE74244.1| Hypothetical protein CBG21929 [Caeno... 59 2e-07
gi|13274548|gb|AAK17973.1| nuclear receptor NHR-23 [Caenorhabdit... 59 2e-07
gi|10198085|gb|AAG15177.1| nuclear receptor NHR-86 [Caenorhabdit... 59 2e-07
gi|25151485|ref|NP_740887.1| nuclear Hormone Receptor, regulates... 59 2e-07
gi|14133778|gb|AAK54129.1| nuclear receptor nhr-7C [Dirofilaria ... 59 2e-07
gi|7495161|pir||T18848 hypothetical protein C01H6.5 - Caenorhabd... 59 2e-07
gi|25150325|ref|NP_741729.1| nuclear Hormone Receptor (50.6 kD) ... 59 2e-07
gi|16797884|gb|AAL29200.1| nuclear receptor AmNR7 [Acropora mill... 59 2e-07
gi|27808670|sp|Q22127|NH40_CAEEL Nuclear hormone receptor family... 59 2e-07
gi|494192|pdb|1HRA| Retinoic Acid Receptor (Human) (Beta Dna-Bi... 59 3e-07
gi|12847018|dbj|BAB27404.1| unnamed protein product [Mus musculus] 59 3e-07
gi|17566968|ref|NP_506798.1| hepatocyte nuclear factor 4 family ... 59 3e-07
gi|1173533|gb|AAC53253.1| orphan receptor >gnl|BL_ORD_ID|1946016... 59 3e-07
gi|21955144|ref|NP_665723.1| pregnancy specific beta-1-glycoprot... 59 3e-07
gi|2078499|gb|AAB54059.1| hormone receptor 3C [Choristoneura fum... 59 3e-07
gi|28573924|ref|NP_788303.1| CG33183-PA [Drosophila melanogaster... 59 3e-07
gi|39584628|emb|CAE72381.1| Hypothetical protein CBG19535 [Caeno... 59 3e-07
gi|225832|prf||1314259A retinoic acid receptor 59 3e-07
gi|33468913|ref|NP_035066.1| nuclear receptor subfamily 1, group... 59 3e-07
gi|5804932|emb|CAB53540.1| Rev-ErbAalpha protein [Homo sapiens] 59 3e-07
gi|45384256|ref|NP_990625.1| retinoic acid receptor [Gallus gall... 59 3e-07
gi|27924187|gb|AAH44975.1| Nr2f2-prov protein [Xenopus laevis] 59 3e-07
gi|34785135|gb|AAH56748.1| Zgc:65854 protein [Danio rerio] 59 3e-07
gi|9955274|pdb|1DSZ|B Chain B, Structure Of The RxrRAR DNA-Bindi... 59 3e-07
gi|6980611|pdb|1BY4|A Chain A, Structure And Mechanism Of The Ho... 59 3e-07
gi|4506577|ref|NP_002934.1| RAR-related orphan receptor A isofor... 59 3e-07
gi|48097465|ref|XP_393790.1| similar to Ecdysone-induced protein... 59 3e-07
gi|538262|gb|AAA21479.1| ovalbumin upstream promoter transcripti... 59 3e-07
gi|10198047|gb|AAG15158.1| nuclear receptor NHR-61 [Caenorhabdit... 59 3e-07
gi|1718061|sp|P54779|USP_MANSE Ultraspiracle protein homolog >gn... 59 3e-07
gi|39594566|emb|CAE72144.1| Hypothetical protein CBG19242 [Caeno... 59 3e-07
gi|112859|sp|P16376|7UP2_DROME Steroid receptor seven-up type 2 ... 59 3e-07
gi|24646228|ref|NP_731681.1| CG11502-PA [Drosophila melanogaster... 59 3e-07
gi|14484879|gb|AAK62804.1| nuclear receptor HR3 isoform A [Bomby... 59 3e-07
gi|17535327|ref|NP_497073.1| nuclear Hormone Receptor (46.9 kD) ... 59 3e-07
gi|27806025|ref|NP_776827.1| nuclear receptor subfamily 2, group... 59 3e-07
gi|482928|emb|CAA54096.1| ARP-1 [Mus musculus] 59 3e-07
gi|14149746|ref|NP_066285.1| nuclear receptor subfamily 2, group... 59 3e-07
gi|18158445|ref|NP_542956.1| nuclear receptor subfamily 2, group... 59 3e-07
gi|6753770|ref|NP_034281.1| nuclear receptor subfamily 2, group ... 59 3e-07
gi|31206855|ref|XP_312394.1| ENSANGP00000002992 [Anopheles gambi... 59 3e-07
gi|32454395|gb|AAP82999.1| ovalbumin upstream promoter transcrip... 59 3e-07
gi|17737921|ref|NP_524325.1| CG11502-PB [Drosophila melanogaster... 59 3e-07
gi|1703646|gb|AAB37686.1| xCOUP-TF-B=proposed retinoid receptor-... 59 3e-07
gi|45383323|ref|NP_989752.1| nuclear receptor subfamily 2, group... 59 3e-07
gi|12484038|gb|AAG53940.1| nuclear hormone receptor [Aedes aegypti] 59 3e-07
gi|28573922|ref|NP_788302.1| CG33183-PB [Drosophila melanogaster... 58 4e-07
gi|17563882|ref|NP_504453.1| nuclear receptor NHR-68 family memb... 58 4e-07
gi|39591243|emb|CAE73296.1| Hypothetical protein CBG20719 [Caeno... 58 4e-07
gi|47207654|emb|CAF91378.1| unnamed protein product [Tetraodon n... 58 4e-07
gi|20663783|pdb|1H9U|A Chain A, The Structure Of The Human Retin... 58 4e-07
gi|31238331|ref|XP_319750.1| ENSANGP00000017216 [Anopheles gambi... 58 4e-07
gi|31221639|ref|XP_317069.1| ENSANGP00000019535 [Anopheles gambi... 58 4e-07
gi|7110506|gb|AAF36970.1| nuclear receptor 3 [Aedes aegypti] 58 4e-07
gi|16418481|ref|NP_443212.1| nuclear receptor subfamily 1, group... 58 4e-07
gi|34852970|ref|XP_346612.1| hypothetical protein XP_346611 [Rat... 58 4e-07
gi|28573920|ref|NP_788301.1| CG33183-PC [Drosophila melanogaster... 58 4e-07
gi|1144348|gb|AAC18408.1| TR4 [Mus musculus] 58 4e-07
gi|31202257|ref|XP_310077.1| ENSANGP00000003575 [Anopheles gambi... 58 4e-07
gi|28461227|ref|NP_786998.1| nuclear receptor subfamily 2, group... 58 4e-07
gi|24111246|ref|NP_571258.1| nuclear receptor subfamily 2, group... 58 4e-07
gi|5032173|ref|NP_005645.1| nuclear receptor subfamily 2, group ... 58 4e-07
gi|39582376|emb|CAE74760.1| Hypothetical protein CBG22587 [Caeno... 58 4e-07
gi|20589472|ref|NP_571255.1| nuclear receptor subfamily 2, group... 58 4e-07
gi|20589475|ref|NP_571261.1| nuclear receptor subfamily 2, group... 58 4e-07
gi|466468|gb|AAA19853.1| COUP-TFI 58 4e-07
gi|13592107|ref|NP_112392.1| nuclear receptor subfamily 2, group... 58 4e-07
>gi|25153085|ref|NP_496066.2| nuclear Hormone Receptor (nhr-19)
[Caenorhabditis elegans]
gi|21542424|sp|Q09528|NH19_CAEEL Nuclear hormone receptor family
member nhr-19
gi|18958135|emb|CAA87381.2| Hypothetical protein E02H1.7
[Caenorhabditis elegans]
gi|19171242|emb|CAD27185.1| Hypothetical protein E02H1.7
[Caenorhabditis elegans]
Length = 477
Score = 802 bits (2071), Expect = 0.0
Identities = 413/444 (93%), Positives = 413/444 (93%)
Frame = -3
Query: 1335 ITAPRQSMSTAFQKMPTFTSVISVPSIAAIAPQMPSVKPEKGVIGQCLICGEPSTGKHYG 1156
ITAPRQSMSTAFQKMPTFTSVISVPSIAAIAPQMPSVKPEKGVIGQCLICGEPSTGKHYG
Sbjct: 34 ITAPRQSMSTAFQKMPTFTSVISVPSIAAIAPQMPSVKPEKGVIGQCLICGEPSTGKHYG 93
Query: 1155 IVACLGCKTFFRRAVVQRQDTECKREKPCDVTTMXXXXXXXXXXXXCLESGMSKEALQPR 976
IVACLGCKTFFRRAVVQRQDTECKREKPCDVTTM CLESGMSKEALQPR
Sbjct: 94 IVACLGCKTFFRRAVVQRQDTECKREKPCDVTTMARKACRACRYRKCLESGMSKEALQPR 153
Query: 975 RDLIGXXXXXXXXXXXXXXXXXXXPQVEDKSQYLTLLENLTTIDDRLRKKKLEVVASRQA 796
RDLIG PQVEDKSQYLTLLENLTTIDDRLRKKKLEVVASRQA
Sbjct: 154 RDLIGCRRIRSRPSCSTSTPTPPRPQVEDKSQYLTLLENLTTIDDRLRKKKLEVVASRQA 213
Query: 795 AVDLAVLAKQGCMSITDTSGPSTSRYVPGGTSPNGGDHKMMVMLGTDISVSTQSELLMML 616
AVDLAVLAKQGCMSITDTSGPSTSRYVPGGTSPNGGDHKMMVMLGTDISVSTQSELLMML
Sbjct: 214 AVDLAVLAKQGCMSITDTSGPSTSRYVPGGTSPNGGDHKMMVMLGTDISVSTQSELLMML 273
Query: 615 EWTRTLPVFASLPVQDRSVILKRFAVHCLILEHGYYTAQANIDDVWLITNGTCMPRNVEK 436
EWTRTLPVFASLPVQDRSVILKRFAVHCLILEHGYYTAQANIDDVWLITNGTCMPRNVEK
Sbjct: 274 EWTRTLPVFASLPVQDRSVILKRFAVHCLILEHGYYTAQANIDDVWLITNGTCMPRNVEK 333
Query: 435 LEEGCKISVSADRRWRQEKLYKQMTDCCIDEVATPLRNLKLSPQEIVVIKIIVLFNCGCS 256
LEEGCKISVSADRRWRQEKLYKQMTDCCIDEVATPLRNLKLSPQEIVVIKIIVLFNCGCS
Sbjct: 334 LEEGCKISVSADRRWRQEKLYKQMTDCCIDEVATPLRNLKLSPQEIVVIKIIVLFNCGCS 393
Query: 255 SDYSEITEASRRIVLTFRNKVVSALFAYYESVGLQNYAERFGNLVLMLSGVSSAASSMLE 76
SDYSEITEASRRIVLTFRNKVVSALFAYYESVGLQNYAERFGNLVLMLSGVSSAASSMLE
Sbjct: 394 SDYSEITEASRRIVLTFRNKVVSALFAYYESVGLQNYAERFGNLVLMLSGVSSAASSMLE 453
Query: 75 AYQVMRLFKITPFDPLSQELLFNI 4
AYQVMRLFKITPFDPLSQELLFNI
Sbjct: 454 AYQVMRLFKITPFDPLSQELLFNI 477
>gi|7498312|pir||T20416 hypothetical protein E02H1.7 - Caenorhabditis
elegans
Length = 446
Score = 765 bits (1976), Expect = 0.0
Identities = 399/446 (89%), Positives = 399/446 (89%), Gaps = 16/446 (3%)
Frame = -3
Query: 1293 MPTFTSVISVPSIAAIAPQMPSVKPEKGVIGQCLICGEPSTGKHYGIVACLGCKTFFRRA 1114
MPTFTSVISVPSIAAIAPQMPSVKPEKGVIGQCLICGEPSTGKHYGIVACLGCKTFFRRA
Sbjct: 1 MPTFTSVISVPSIAAIAPQMPSVKPEKGVIGQCLICGEPSTGKHYGIVACLGCKTFFRRA 60
Query: 1113 VVQRQDTECKREKPCDVTTMXXXXXXXXXXXXCLESGMSKEALQPRRDLIGXXXXXXXXX 934
VVQRQDTECKREKPCDVTTM CLESGMSKEALQPRRDLIG
Sbjct: 61 VVQRQDTECKREKPCDVTTMARKACRACRYRKCLESGMSKEALQPRRDLIGCRRIRSRPS 120
Query: 933 XXXXXXXXXXPQVEDKSQYLTLLENLTTIDDRLRKKKLEVVASRQAAVDLAVLAKQGCMS 754
PQVEDKSQYLTLLENLTTIDDRLRKKKLEVVASRQAAVDLAVLAKQGCMS
Sbjct: 121 CSTSTPTPPRPQVEDKSQYLTLLENLTTIDDRLRKKKLEVVASRQAAVDLAVLAKQGCMS 180
Query: 753 ITDTSGPSTSRYVPGGTSPNGGDHKMMVMLGTDISVSTQSELLMMLEWTRTLPVFASLPV 574
ITDTSGPSTSRYVPGGTSPNGGDHKMMVMLGTDISVSTQSELLMMLEWTRTLPVFASLPV
Sbjct: 181 ITDTSGPSTSRYVPGGTSPNGGDHKMMVMLGTDISVSTQSELLMMLEWTRTLPVFASLPV 240
Query: 573 QDRSVILKRFAVHCLILEHGYYTAQANIDDVWLITNGTCMPRNVEKLEEGCKISVSADRR 394
QDRSVILKRFAVHCLILEHGYYTAQANIDDVWLITNGTCMPRNVEKLEEGCKISVSADRR
Sbjct: 241 QDRSVILKRFAVHCLILEHGYYTAQANIDDVWLITNGTCMPRNVEKLEEGCKISVSADRR 300
Query: 393 WRQEKLYKQMTDCCIDEVATPLRNLKLSPQEIVVIKIIVLFNCGCSS------------- 253
WRQEKLYKQMTDCCIDEVATPLRNLKLSPQEIVVIKIIVLFNCGCSS
Sbjct: 301 WRQEKLYKQMTDCCIDEVATPLRNLKLSPQEIVVIKIIVLFNCGCSSGEISKTFSRKLKI 360
Query: 252 ---DYSEITEASRRIVLTFRNKVVSALFAYYESVGLQNYAERFGNLVLMLSGVSSAASSM 82
DYSEITEASRRIVLTFRNKVVSALFAYYESVGLQNYAERFGNLVLMLSGVSSAASSM
Sbjct: 361 ILPDYSEITEASRRIVLTFRNKVVSALFAYYESVGLQNYAERFGNLVLMLSGVSSAASSM 420
Query: 81 LEAYQVMRLFKITPFDPLSQELLFNI 4
LEAYQVMRLFKITPFDPLSQELLFNI
Sbjct: 421 LEAYQVMRLFKITPFDPLSQELLFNI 446
>gi|39579409|emb|CAE56399.1| Hypothetical protein CBG24087
[Caenorhabditis briggsae]
Length = 415
Score = 655 bits (1689), Expect = 0.0
Identities = 337/431 (78%), Positives = 361/431 (83%), Gaps = 1/431 (0%)
Frame = -3
Query: 1293 MPTFTSVISV-PSIAAIAPQMPSVKPEKGVIGQCLICGEPSTGKHYGIVACLGCKTFFRR 1117
MPTFTSVISV P +A++APQ+ + +IGQCLICGEPSTGKHYGIVACLGCKTFFRR
Sbjct: 1 MPTFTSVISVVPGLASMAPQLAT-----SIIGQCLICGEPSTGKHYGIVACLGCKTFFRR 55
Query: 1116 AVVQRQDTECKREKPCDVTTMXXXXXXXXXXXXCLESGMSKEALQPRRDLIGXXXXXXXX 937
AVVQRQDTECKREK CD TTM CLESGMSKEALQPRRDLIG
Sbjct: 56 AVVQRQDTECKREKACDTTTMARKACRACRYRKCLESGMSKEALQPRRDLIGCRRIRSRP 115
Query: 936 XXXXXXXXXXXPQVEDKSQYLTLLENLTTIDDRLRKKKLEVVASRQAAVDLAVLAKQGCM 757
+EDKSQYLTLL+NLT ID+RLRKKKLEVV SRQ A+DLA L KQGCM
Sbjct: 116 SCSHSTPTPPRAHIEDKSQYLTLLDNLTIIDERLRKKKLEVVTSRQTAIDLAKLTKQGCM 175
Query: 756 SITDTSGPSTSRYVPGGTSPNGGDHKMMVMLGTDISVSTQSELLMMLEWTRTLPVFASLP 577
S D +GPSTSRY+PGGTSPNG DHKMMVMLGTDISV+TQ+ELLMMLEWTRTLPVFA+LP
Sbjct: 176 SAADVAGPSTSRYIPGGTSPNGSDHKMMVMLGTDISVATQTELLMMLEWTRTLPVFAALP 235
Query: 576 VQDRSVILKRFAVHCLILEHGYYTAQANIDDVWLITNGTCMPRNVEKLEEGCKISVSADR 397
V DR+VILKRFAVHCLILEHGYYTA ANIDDVWLITNGTCMPRNVEKLEEG +
Sbjct: 236 VSDRNVILKRFAVHCLILEHGYYTALANIDDVWLITNGTCMPRNVEKLEEGSR------- 288
Query: 396 RWRQEKLYKQMTDCCIDEVATPLRNLKLSPQEIVVIKIIVLFNCGCSSDYSEITEASRRI 217
EKLYKQMTDCCIDEVATPLRNLKLSPQE+VVIKIIVLFNCGCSSDYSEI+E SRR+
Sbjct: 289 ----EKLYKQMTDCCIDEVATPLRNLKLSPQEMVVIKIIVLFNCGCSSDYSEISEQSRRV 344
Query: 216 VLTFRNKVVSALFAYYESVGLQNYAERFGNLVLMLSGVSSAASSMLEAYQVMRLFKITPF 37
VLTFRNKV+SALFAYYESVG QNYAERFGNLVLMLSGVSSAA++MLEAYQVMRLFKITPF
Sbjct: 345 VLTFRNKVISALFAYYESVGQQNYAERFGNLVLMLSGVSSAAATMLEAYQVMRLFKITPF 404
Query: 36 DPLSQELLFNI 4
D L+QELLFNI
Sbjct: 405 DTLTQELLFNI 415