Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F01G4_3
(3783 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17539644|ref|NP_502084.1| DEAD/DEAH box helicase and helicase... 2367 0.0
gi|39593718|emb|CAE62010.1| Hypothetical protein CBG06018 [Caeno... 1823 0.0
gi|34852185|ref|XP_215327.2| similar to superkiller viralicidic ... 745 0.0
gi|7671650|emb|CAB89307.1| dJ34F7.7 (superkiller viralicidic act... 744 0.0
gi|1362811|pir||S56752 helicase SKI2W - human >gnl|BL_ORD_ID|342... 744 0.0
gi|3123284|sp|Q15477|SKIW_HUMAN Helicase SKI2W (Helicase-like pr... 743 0.0
gi|2347134|gb|AAB67978.1| helicase [Homo sapiens] 743 0.0
gi|1403336|emb|CAA67024.1| SKI2W protein [Homo sapiens] 743 0.0
gi|47208140|emb|CAF92300.1| unnamed protein product [Tetraodon n... 743 0.0
gi|20631987|ref|NP_008860.3| superkiller viralicidic activity 2-... 743 0.0
gi|1754827|gb|AAB52523.1| helicase-like protein [Homo sapiens] 742 0.0
gi|3395783|gb|AAC78607.1| putative RNA helicase Ski2w [Homo sapi... 742 0.0
gi|42406362|gb|AAH65999.1| Skiv2l protein [Mus musculus] 740 0.0
gi|47087109|ref|NP_998724.1| superkiller viralicidic activity 2-... 738 0.0
gi|26325700|dbj|BAC26604.1| unnamed protein product [Mus musculus] 738 0.0
gi|10946650|ref|NP_067312.1| superkiller viralicidic activity 2-... 736 0.0
gi|17933658|ref|NP_524465.1| CG10210-PA [Drosophila melanogaster... 706 0.0
gi|13446608|emb|CAC35050.1| putative helicase Ski2 [Drosophila m... 706 0.0
gi|46111799|ref|XP_382957.1| hypothetical protein FG02781.1 [Gib... 667 0.0
gi|32417138|ref|XP_329047.1| hypothetical protein [Neurospora cr... 665 0.0
gi|15232685|ref|NP_190280.1| DEAD/DEAH box helicase, putative [A... 657 0.0
gi|50251266|dbj|BAD28046.1| putative Helicase SKI2W [Oryza sativ... 657 0.0
gi|49067436|ref|XP_398008.1| hypothetical protein UM00393.1 [Ust... 654 0.0
gi|31207827|ref|XP_312880.1| ENSANGP00000014710 [Anopheles gambi... 653 0.0
gi|19075595|ref|NP_588095.1| putative DEAD/DEAH box helicase [Sc... 640 0.0
gi|46437839|gb|EAK97179.1| hypothetical protein CaO19.13783 [Can... 632 e-179
gi|50408898|ref|XP_456821.1| unnamed protein product [Debaryomyc... 618 e-175
gi|28828578|gb|AAO51181.1| similar to putative DEAD/DEAH box hel... 616 e-174
gi|6323430|ref|NP_013502.1| blocks translation of non-poly(A) mR... 616 e-174
gi|50285719|ref|XP_445288.1| unnamed protein product [Candida gl... 607 e-172
gi|410320|gb|AAA35049.1| antiviral protein 607 e-172
gi|45190673|ref|NP_984927.1| AER067Cp [Eremothecium gossypii] >g... 595 e-168
gi|45190426|ref|NP_984680.1| AEL181Cp [Eremothecium gossypii] >g... 523 e-146
gi|50303465|ref|XP_451674.1| unnamed protein product [Kluyveromy... 520 e-146
gi|6322411|ref|NP_012485.1| Dead-box family helicase required fo... 514 e-144
gi|50290975|ref|XP_447920.1| unnamed protein product [Candida gl... 513 e-143
gi|50543746|ref|XP_500039.1| hypothetical protein [Yarrowia lipo... 512 e-143
gi|39585779|emb|CAE59981.1| Hypothetical protein CBG03473 [Caeno... 509 e-142
gi|46432976|gb|EAK92435.1| hypothetical protein CaO19.8915 [Cand... 506 e-141
gi|49094176|ref|XP_408549.1| hypothetical protein AN4412.2 [Aspe... 500 e-139
gi|17542826|ref|NP_501757.1| DEAD/DEAH box helicase and helicase... 500 e-139
gi|31231980|ref|XP_318627.1| ENSANGP00000020973 [Anopheles gambi... 496 e-138
gi|23478020|gb|EAA15221.1| antiviral protein ski2 [Plasmodium yo... 494 e-138
gi|28829653|gb|AAO52169.1| similar to Homo sapiens (Human). Hypo... 493 e-137
gi|19484182|gb|AAH23478.1| Skiv2l protein [Mus musculus] 493 e-137
gi|19114484|ref|NP_593572.1| putative helicase [Schizosaccharomy... 481 e-134
gi|49069620|ref|XP_399099.1| hypothetical protein UM01484.1 [Ust... 469 e-130
gi|19114214|ref|NP_593302.1| DEAD box helicase [Schizosaccharomy... 436 e-120
gi|46109548|ref|XP_381832.1| hypothetical protein FG01656.1 [Gib... 435 e-120
gi|50310243|ref|XP_455141.1| unnamed protein product [Kluyveromy... 435 e-120
gi|23488188|gb|EAA21253.1| Homo sapiens KIAA0052 protein-related... 434 e-119
gi|50419435|ref|XP_458244.1| unnamed protein product [Debaryomyc... 432 e-119
gi|50258745|gb|EAL21430.1| hypothetical protein CNBD1250 [Crypto... 429 e-118
gi|17864608|ref|NP_524929.1| CG4152-PA [Drosophila melanogaster]... 425 e-117
gi|50550521|ref|XP_502733.1| hypothetical protein [Yarrowia lipo... 424 e-117
gi|47550803|ref|NP_999933.1| zgc:63838 [Danio rerio] >gnl|BL_ORD... 424 e-116
gi|23612103|ref|NP_703683.1| ATP dependent RNA helicase, putativ... 423 e-116
gi|46228571|gb|EAK89441.1| Mtr4p like SKI family SFII helicase [... 422 e-116
gi|38103480|gb|EAA50172.1| hypothetical protein MG03931.4 [Magna... 422 e-116
gi|32404016|ref|XP_322621.1| hypothetical protein [Neurospora cr... 421 e-116
gi|19074207|ref|NP_584813.1| ATP-DEPENDENT RNA HELICASE (SKI2 FA... 419 e-115
gi|20141917|sp|P42285|K052_HUMAN Protein KIAA0052 >gnl|BL_ORD_ID... 419 e-115
gi|39930353|ref|NP_056175.2| KIAA0052 [Homo sapiens] >gnl|BL_ORD... 419 e-115
gi|34783228|gb|AAH28604.2| KIAA0052 protein [Homo sapiens] 419 e-115
gi|40850929|gb|AAH65258.1| KIAA0052 protein [Homo sapiens] 419 e-115
gi|26353436|dbj|BAC40348.1| unnamed protein product [Mus musculus] 418 e-115
gi|26346947|dbj|BAC37122.1| unnamed protein product [Mus musculus] 418 e-115
gi|21312352|ref|NP_082427.1| RIKEN cDNA 2610528A15 [Mus musculus... 418 e-115
gi|15218905|ref|NP_176185.1| ATP-dependent RNA helicase, putativ... 417 e-115
gi|23613618|ref|NP_704639.1| helicase with Zn-finger motif, puta... 411 e-113
gi|18396436|ref|NP_565338.1| HUA enhancer 2 (HEN2) / DExH-box RN... 407 e-111
gi|16024936|gb|AAL11446.1| HUA enhancer 2 [Arabidopsis thaliana] 407 e-111
gi|25307597|pir||B84481 hypothetical protein At2g06990 [imported... 403 e-110
gi|19074168|ref|NP_584774.1| putative ATP-DEPENDENT RNA HELICASE... 395 e-108
gi|49097368|ref|XP_410144.1| hypothetical protein AN6007.2 [Aspe... 393 e-107
gi|50256433|gb|EAL19158.1| hypothetical protein CNBH2570 [Crypto... 390 e-106
gi|38099821|gb|EAA47106.1| hypothetical protein MG10929.4 [Magna... 382 e-104
gi|5541663|emb|CAB51169.1| putative helicase, fragment [Arabidop... 373 e-101
gi|48140560|ref|XP_397131.1| similar to CG10210-PA [Apis mellifera] 358 7e-97
gi|29245089|gb|EAA36750.1| GLP_83_12455_16540 [Giardia lamblia A... 336 3e-90
gi|50543658|ref|XP_499995.1| hypothetical protein [Yarrowia lipo... 320 1e-85
gi|23335111|ref|ZP_00120349.1| COG4581: Superfamily II RNA helic... 307 1e-81
gi|23465319|ref|NP_695922.1| probable helicase [Bifidobacterium ... 307 1e-81
gi|9631809|ref|NP_048589.1| contains ATP-GTP binding motif; simi... 300 2e-79
gi|29833237|ref|NP_827871.1| putative ATP-dependent RNA helicase... 291 6e-77
gi|46363002|ref|ZP_00225798.1| COG4581: Superfamily II RNA helic... 289 4e-76
gi|19552703|ref|NP_600705.1| putative helicase [Corynebacterium ... 288 9e-76
gi|46129815|ref|ZP_00164418.2| COG4581: Superfamily II RNA helic... 287 1e-75
gi|21220127|ref|NP_625906.1| putative helicase [Streptomyces coe... 286 2e-75
gi|31793275|ref|NP_855768.1| PROBABLE ATP-DEPENDENT DNA HELICASE... 285 4e-75
gi|15609229|ref|NP_216608.1| helY [Mycobacterium tuberculosis H3... 285 4e-75
gi|33863754|ref|NP_895314.1| putative DNA helicase [Prochlorococ... 285 6e-75
gi|37522164|ref|NP_925541.1| probable helicase [Gloeobacter viol... 283 2e-74
gi|33865170|ref|NP_896729.1| putative DNA helicase [Synechococcu... 283 2e-74
gi|38233827|ref|NP_939594.1| Putative helicase [Corynebacterium ... 281 1e-73
gi|22297893|ref|NP_681140.1| ORF_ID:tlr0350~putative helicase [T... 281 1e-73
gi|48892215|ref|ZP_00325613.1| COG4581: Superfamily II RNA helic... 280 2e-73
gi|41407926|ref|NP_960762.1| HelY [Mycobacterium avium subsp. pa... 279 4e-73
gi|30017365|ref|NP_835163.1| superkiller viralicidic activity 2-... 277 1e-72
gi|46135421|ref|ZP_00162841.2| COG4581: Superfamily II RNA helic... 277 2e-72
gi|17227985|ref|NP_484533.1| putative helicase [Nostoc sp. PCC 7... 276 2e-72
gi|23126945|ref|ZP_00108825.1| COG4581: Superfamily II RNA helic... 276 3e-72
gi|50842859|ref|YP_056086.1| superfamily II RNA helicase [Propio... 276 3e-72
gi|25028174|ref|NP_738228.1| putative helicase [Corynebacterium ... 276 4e-72
gi|13812112|ref|NP_113239.1| putative helicase-like protein [Gui... 276 4e-72
gi|15827694|ref|NP_301957.1| probable helicase, Ski2 subfamily [... 275 6e-72
gi|33241070|ref|NP_876012.1| Superfamily II RNA helicase [Prochl... 274 1e-71
gi|14423540|gb|AAK62452.1| Similar to Synechocystis antiviral pr... 272 5e-71
gi|46390556|dbj|BAD16042.1| putative helicase [Oryza sativa (jap... 271 7e-71
gi|15223032|ref|NP_177164.1| DEAD/DEAH box helicase, putative [A... 271 7e-71
gi|33862023|ref|NP_893584.1| putative DNA helicase [Prochlorococ... 271 7e-71
gi|47199973|emb|CAF92389.1| unnamed protein product [Tetraodon n... 244 1e-62
gi|23112333|ref|ZP_00097831.1| COG4581: Superfamily II RNA helic... 233 2e-59
gi|39104516|dbj|BAC97855.2| mKIAA0052 protein [Mus musculus] 229 4e-58
gi|46226293|gb|EAK87306.1| mRNA translation inhibitor SKI2 SFII ... 229 4e-58
gi|16332264|ref|NP_442992.1| antiviral protein [Synechocystis sp... 227 2e-57
gi|25406029|pir||D96723 hypothetical protein F20P5.20 [imported]... 225 6e-57
gi|47219912|emb|CAF97182.1| unnamed protein product [Tetraodon n... 223 2e-56
gi|15928685|gb|AAH14810.1| 2610528A15Rik protein [Mus musculus] 193 2e-47
gi|50761476|ref|XP_424729.1| PREDICTED: similar to RIKEN cDNA 26... 193 2e-47
gi|34783197|gb|AAH14669.2| KIAA0052 protein [Homo sapiens] 193 2e-47
gi|48837292|ref|ZP_00294287.1| COG4581: Superfamily II RNA helic... 167 2e-39
gi|21619317|gb|AAH31779.1| KIAA0052 protein [Homo sapiens] 155 9e-36
gi|3043527|emb|CAA11251.1| helicase [Streptomyces avermitilis] >... 150 2e-34
gi|50303467|ref|XP_451675.1| unnamed protein product [Kluyveromy... 135 6e-30
gi|15920808|ref|NP_376477.1| 704aa long hypothetical helicase [S... 132 5e-29
gi|26346837|dbj|BAC37067.1| unnamed protein product [Mus musculus] 129 5e-28
gi|20092019|ref|NP_618094.1| helicase [Methanosarcina acetivoran... 128 1e-27
gi|21226527|ref|NP_632449.1| helicase [Methanosarcina mazei Go1]... 123 4e-26
gi|48838732|ref|ZP_00295672.1| COG1204: Superfamily II helicase ... 110 3e-22
gi|32474758|ref|NP_867752.1| putative helicase [Pirellula sp. 1]... 107 3e-21
gi|30387615|ref|NP_084253.1| DNA polymerase theta [Mus musculus]... 105 6e-21
gi|32306445|gb|AAN39838.1| DNA polymerase Q [Mus musculus] 105 6e-21
gi|50556536|ref|XP_505676.1| hypothetical protein [Yarrowia lipo... 105 8e-21
gi|15233883|ref|NP_194996.1| DNA-directed DNA polymerase family ... 102 7e-20
gi|21219665|ref|NP_625444.1| putative helicase [Streptomyces coe... 102 9e-20
gi|14600518|ref|NP_147034.1| helicase [Aeropyrum pernix K1] >gnl... 101 1e-19
gi|31198797|ref|XP_308346.1| ENSANGP00000019077 [Anopheles gambi... 101 2e-19
gi|34854226|ref|XP_345154.1| similar to RIKEN cDNA 2610528A15 [R... 101 2e-19
gi|48836633|ref|ZP_00293629.1| COG4581: Superfamily II RNA helic... 100 3e-19
gi|29828116|ref|NP_822750.1| putative ATP-dependent helicase [St... 100 3e-19
gi|45358453|ref|NP_988010.1| superfamily II helicase [Methanococ... 100 5e-19
gi|46364734|ref|ZP_00227318.1| COG4581: Superfamily II RNA helic... 99 8e-19
gi|25028372|ref|NP_738426.1| putative helicase [Corynebacterium ... 99 1e-18
gi|38234003|ref|NP_939770.1| Putative helicase [Corynebacterium ... 98 1e-18
gi|32416990|ref|XP_328973.1| hypothetical protein [Neurospora cr... 98 1e-18
gi|10435899|dbj|BAB14698.1| unnamed protein product [Homo sapiens] 98 1e-18
gi|19553128|ref|NP_601130.1| putative helicase [Corynebacterium ... 98 2e-18
gi|14521089|ref|NP_126564.1| dna helicase related protein [Pyroc... 98 2e-18
gi|23478915|gb|EAA15876.1| Drosophila melanogaster CG5931 gene p... 97 2e-18
gi|50843573|ref|YP_056800.1| DeaD/DeaH box helicase [Propionibac... 97 3e-18
gi|46190308|ref|ZP_00121668.2| COG4581: Superfamily II RNA helic... 97 3e-18
gi|23464656|ref|NP_695259.1| probable DEAD box-like helicase [Bi... 97 3e-18
gi|50427633|ref|XP_462429.1| unnamed protein product [Debaryomyc... 97 4e-18
gi|46205357|ref|ZP_00048646.2| COG4581: Superfamily II RNA helic... 97 4e-18
gi|40805845|ref|NP_006587.3| DNA polymerase theta isoform 1; pol... 96 5e-18
gi|40805847|ref|NP_955452.1| DNA polymerase theta isoform 2; pol... 96 5e-18
gi|38037038|gb|AAR08421.1| DNA polymerase theta [Homo sapiens] 96 5e-18
gi|14591093|ref|NP_143168.1| hypothetical protein PH1280 [Pyroco... 96 5e-18
gi|39586142|emb|CAE69218.1| Hypothetical protein CBG15258 [Caeno... 96 7e-18
gi|46443831|gb|EAL03110.1| hypothetical protein CaO19.3980 [Cand... 96 7e-18
gi|34858664|ref|XP_215831.2| similar to KIAA0788 protein [Rattus... 95 1e-17
gi|42406352|gb|AAH65924.1| U5-200KD protein [Homo sapiens] 95 1e-17
gi|40018610|ref|NP_796188.2| U5 snRNP-specific protein, 200 kDa;... 95 1e-17
gi|50510635|dbj|BAD32303.1| mKIAA0788 protein [Mus musculus] 95 1e-17
gi|47213176|emb|CAF92185.1| unnamed protein product [Tetraodon n... 94 2e-17
gi|49067214|ref|XP_397897.1| hypothetical protein UM00282.1 [Ust... 94 2e-17
gi|20521660|dbj|BAA34508.2| KIAA0788 protein [Homo sapiens] 94 2e-17
gi|40217847|ref|NP_054733.2| U5 snRNP-specific protein, 200-KD [... 94 2e-17
gi|45861372|gb|AAS78571.1| 200 kDa U5 snRNP-specific spliceosoma... 94 2e-17
gi|12643640|sp|O75643|U520_HUMAN U5 small nuclear ribonucleoprot... 94 2e-17
gi|19114258|ref|NP_593346.1| putative U5 snRNP-specific 200kd pr... 94 2e-17
gi|13892061|gb|AAK39635.1| DNA polymerase theta [Homo sapiens] 93 4e-17
gi|6321020|ref|NP_011099.1| RNA helicase-related protein require... 93 6e-17
gi|10436768|dbj|BAB14906.1| unnamed protein product [Homo sapiens] 92 7e-17
gi|45185372|ref|NP_983089.1| ABR142Wp [Eremothecium gossypii] >g... 92 9e-17
gi|34869354|ref|XP_221423.2| similar to DNA polymerase theta sho... 92 9e-17
gi|38106724|gb|EAA52996.1| hypothetical protein MG06124.4 [Magna... 90 4e-16
gi|31242349|ref|XP_321605.1| ENSANGP00000009625 [Anopheles gambi... 89 6e-16
gi|28574898|ref|NP_648818.3| CG5931-PA [Drosophila melanogaster]... 89 8e-16
gi|23478640|gb|EAA15672.1| RNA helicase-related [Plasmodium yoel... 88 1e-15
gi|50763964|ref|XP_422924.1| PREDICTED: similar to Putative U5 s... 88 2e-15
gi|50302989|ref|XP_451432.1| unnamed protein product [Kluyveromy... 87 2e-15
gi|18977049|ref|NP_578406.1| helicase [Pyrococcus furiosus DSM 3... 87 4e-15
gi|16081891|ref|NP_394295.1| DNA helicase related protein [Therm... 87 4e-15
gi|15791037|ref|NP_280861.1| pre-mRNA splicing helicase; Brr2 [H... 87 4e-15
gi|18202627|sp|Q97VY9|HELS_SULSO Putative ski2-type helicase 86 5e-15
gi|25395773|pir||A88470 protein C28H8.3 [imported] - Caenorhabdi... 86 5e-15
gi|15899206|ref|NP_343811.1| DNA helicase related protein [Sulfo... 86 5e-15
gi|17552356|ref|NP_498283.1| DEAD/DEAH box helicase and helicase... 86 5e-15
gi|39584934|emb|CAE64358.1| Hypothetical protein CBG09045 [Caeno... 86 7e-15
gi|11500032|ref|NP_071282.1| SKI2-family helicase [Archaeoglobus... 86 7e-15
gi|34878039|ref|XP_224795.2| similar to Hypothetical protein FLJ... 86 9e-15
gi|50729526|ref|XP_416549.1| PREDICTED: similar to DNA polymeras... 85 1e-14
gi|31239657|ref|XP_320242.1| ENSANGP00000016523 [Anopheles gambi... 85 1e-14
gi|20093551|ref|NP_613398.1| Predicted Superfamily II helicase [... 85 1e-14
gi|46227703|gb|EAK88623.1| DEXDc+HELICc, mus308/POLQ like SFII D... 85 1e-14
gi|46137087|ref|XP_390235.1| hypothetical protein FG10059.1 [Gib... 84 2e-14
gi|50751330|ref|XP_422348.1| PREDICTED: similar to hypothetical ... 84 3e-14
gi|14589999|ref|NP_142063.1| hypothetical protein PH0044 [Pyroco... 84 3e-14
gi|45527462|ref|ZP_00178662.1| COG4581: Superfamily II RNA helic... 83 4e-14
gi|32406424|ref|XP_323825.1| hypothetical protein [Neurospora cr... 83 6e-14
gi|49073524|ref|XP_400974.1| hypothetical protein UM03359.1 [Ust... 82 8e-14
gi|38104023|gb|EAA50649.1| hypothetical protein MG04408.4 [Magna... 82 8e-14
gi|19173634|ref|NP_597437.1| putative RNA HELICASE OF THE SKI2 S... 82 8e-14
gi|50257539|gb|EAL20244.1| hypothetical protein CNBF0560 [Crypto... 82 1e-13
gi|29725619|ref|NP_060101.2| hypothetical protein FLJ20035 [Homo... 82 1e-13
gi|49090830|ref|XP_406876.1| hypothetical protein AN2739.2 [Aspe... 81 2e-13
gi|50424241|ref|XP_460707.1| unnamed protein product [Debaryomyc... 81 2e-13
gi|40215561|gb|AAR82756.1| RE48845p [Drosophila melanogaster] 81 2e-13
gi|24660651|ref|NP_648178.1| CG7972-PA [Drosophila melanogaster]... 81 2e-13
gi|38111296|gb|EAA56895.1| hypothetical protein MG07250.4 [Magna... 80 3e-13
gi|34854163|ref|XP_342197.1| similar to RIKEN cDNA 2610528A15 [R... 80 4e-13
gi|15678683|ref|NP_275798.1| ATP-dependent RNA helicase related ... 80 4e-13
gi|18312257|ref|NP_558924.1| ATP-dependent, DNA binding helicase... 80 4e-13
gi|17933644|ref|NP_524333.1| CG6019-PA [Drosophila melanogaster]... 79 6e-13
gi|19115394|ref|NP_594482.1| putative helicase [Schizosaccharomy... 79 8e-13
gi|13541645|ref|NP_111333.1| Predicted helicase [Thermoplasma vo... 79 8e-13
gi|46437029|gb|EAK96382.1| hypothetical protein CaO19.3098 [Cand... 77 2e-12
gi|46227112|gb|EAK88062.1| SPAC694.02. SKI family SFII helicase ... 77 2e-12
gi|49074438|ref|XP_401353.1| hypothetical protein UM03738.1 [Ust... 77 2e-12
gi|30017579|gb|AAP13001.1| putative Sec63 domain containing prot... 77 3e-12
gi|47210458|emb|CAF94327.1| unnamed protein product [Tetraodon n... 77 4e-12
gi|17556224|ref|NP_497213.1| DEAD/DEAH box helicase and helicase... 77 4e-12
gi|15669311|ref|NP_248116.1| putative SKI2-family helicase [Meth... 77 4e-12
gi|26342655|dbj|BAC34984.1| unnamed protein product [Mus musculus] 76 5e-12
gi|46442828|gb|EAL02114.1| hypothetical protein CaO19.810 [Candi... 76 5e-12
gi|15791161|ref|NP_280985.1| DNA repair protein; Rad24b [Halobac... 76 5e-12
gi|20094271|ref|NP_614118.1| Archaea-specific Superfamily II hel... 76 5e-12
gi|32189764|ref|NP_859494.1| helicase 2 [Leishmania major] >gnl|... 76 7e-12
gi|19110784|gb|AAL85275.1| DNA helicase HEL308 [Mus musculus] 75 9e-12
gi|15218086|ref|NP_173520.1| U5 small nuclear ribonucleoprotein ... 75 9e-12
gi|48103723|ref|XP_395631.1| similar to CG7972-PA [Apis mellifera] 75 1e-11
gi|24647182|ref|NP_650472.2| CG5205-PA [Drosophila melanogaster]... 75 2e-11
gi|15291373|gb|AAK92955.1| GH18520p [Drosophila melanogaster] 75 2e-11
gi|15678832|ref|NP_275949.1| DNA helicase related protein [Metha... 74 2e-11
gi|46108656|ref|XP_381386.1| hypothetical protein FG01210.1 [Gib... 74 2e-11
gi|32454264|gb|AAP82931.1| FE1 [Schistosoma japonicum] 74 2e-11
gi|49096382|ref|XP_409651.1| hypothetical protein AN5514.2 [Aspe... 74 2e-11
gi|50794619|ref|XP_428025.1| PREDICTED: similar to U5 snRNP-spec... 74 2e-11
gi|50293751|ref|XP_449287.1| unnamed protein product [Candida gl... 74 3e-11
gi|47216119|emb|CAG11187.1| unnamed protein product [Tetraodon n... 74 3e-11
gi|50287917|ref|XP_446387.1| unnamed protein product [Candida gl... 74 3e-11
gi|46227805|gb|EAK88725.1| U5 small nuclear ribonucleoprotein 20... 73 5e-11
gi|24307917|ref|NP_006819.1| activating signal cointegrator 1 co... 73 5e-11
gi|50400552|sp|Q8N3C0|HEL1_HUMAN Activating signal cointegrator ... 73 5e-11
gi|39592373|emb|CAE63450.1| Hypothetical protein CBG07909 [Caeno... 73 5e-11
gi|17537127|ref|NP_496710.1| u5 small nuclear ribonucleoprotein ... 73 5e-11
gi|48478452|ref|YP_024158.1| helicase involved in UV-protection ... 73 6e-11
gi|32419999|ref|XP_330443.1| hypothetical protein [Neurospora cr... 73 6e-11
gi|48838250|ref|ZP_00295196.1| COG1202: Superfamily II helicase,... 72 8e-11
gi|49087332|ref|XP_405615.1| hypothetical protein AN1478.2 [Aspe... 72 1e-10
gi|14043179|gb|AAH07577.1| Unknown (protein for IMAGE:3139787) [... 72 1e-10
gi|50256675|gb|EAL19398.1| hypothetical protein CNBH0910 [Crypto... 72 1e-10
gi|37359681|emb|CAE47762.1| SI:bZ1P14.5 (novel protein similar t... 72 1e-10
gi|21228482|ref|NP_634404.1| ATP-dependent DNA helicase [Methano... 71 2e-10
gi|50306067|ref|XP_452995.1| unnamed protein product [Kluyveromy... 71 2e-10
gi|12061185|gb|AAG45474.1| ASC-1 complex subunit P200 [Homo sapi... 71 2e-10
gi|49065250|emb|CAG38619.1| putative helicase AshA [Haloferax vo... 71 2e-10
gi|47678999|dbj|BAD20688.1| mer3 [Coprinopsis cinerea] 71 2e-10
gi|50426987|ref|XP_462098.1| unnamed protein product [Debaryomyc... 71 2e-10
gi|48852109|ref|ZP_00306300.1| COG1204: Superfamily II helicase ... 70 3e-10
gi|38106470|gb|EAA52772.1| hypothetical protein MG05900.4 [Magna... 70 4e-10
gi|34875972|ref|XP_223148.2| similar to CG5205-PA [Rattus norveg... 70 4e-10
gi|32422881|ref|XP_331884.1| hypothetical protein [Neurospora cr... 70 5e-10
gi|2842424|emb|CAA11679.1| RNA helicase [Homo sapiens] 70 5e-10
gi|38567201|emb|CAE76494.1| related to ATP dependent RNA helicas... 70 5e-10
gi|50746585|ref|XP_420565.1| PREDICTED: similar to DNA helicase ... 69 7e-10
gi|37590539|gb|AAH59917.1| Helic1 protein [Mus musculus] 69 7e-10
gi|38090459|ref|XP_125617.2| RIKEN cDNA B630009I04 [Mus musculus] 69 7e-10
gi|1143249|gb|AAC49699.1| G9365 ORF 69 9e-10
gi|6321710|ref|NP_011787.1| SKI2-like helicase; Slh1p [Saccharom... 69 9e-10
gi|50744652|ref|XP_419816.1| PREDICTED: similar to helicase, ATP... 69 1e-09
gi|15227913|ref|NP_181756.1| U5 small nuclear ribonucleoprotein ... 69 1e-09
gi|34876045|ref|XP_341187.1| similar to DNA helicase HEL308 [Rat... 68 1e-09
gi|15791004|ref|NP_280828.1| DNA repair protein; Rad24a [Halobac... 68 2e-09
gi|45201209|ref|NP_986779.1| AGR113Wp [Eremothecium gossypii] >g... 68 2e-09
gi|18976425|ref|NP_577782.1| putative ATP dependent RNA helicase... 68 2e-09
gi|6066463|emb|CAB58415.1| possible MUS308 homolog [Leishmania m... 67 3e-09
gi|19525733|ref|NP_598375.1| DNA helicase HEL308 [Homo sapiens] ... 67 3e-09
gi|15920324|ref|NP_375993.1| 621aa long conserved hypothetical p... 67 3e-09
gi|9759460|dbj|BAB10376.1| RNA helicase [Arabidopsis thaliana] 67 3e-09
gi|30697481|ref|NP_200922.2| DEAD box RNA helicase, putative [Ar... 67 3e-09
gi|15669591|ref|NP_248404.1| putative ATP dependent RNA helicase... 67 4e-09
gi|46227057|gb|EAK88007.1| U5snrp Brr2 SFII RNA helicase (sec63 ... 67 4e-09
gi|29247580|gb|EAA39138.1| GLP_302_20634_23333 [Giardia lamblia ... 66 6e-09
gi|42779931|ref|NP_977178.1| DEAD/DEAH box helicase domain prote... 66 6e-09
gi|50307187|ref|XP_453572.1| unnamed protein product [Kluyveromy... 66 7e-09
gi|20090271|ref|NP_616346.1| hypothetical protein (multi-domain)... 65 1e-08
gi|48839782|ref|ZP_00296712.1| COG1204: Superfamily II helicase ... 65 1e-08
gi|45358847|ref|NP_988404.1| DEAD/DEAH box helicase:Helicase, C-... 65 1e-08
gi|47209207|emb|CAF93355.1| unnamed protein product [Tetraodon n... 65 1e-08
gi|7023033|dbj|BAA91809.1| unnamed protein product [Homo sapiens] 65 1e-08
gi|33871887|gb|AAH07820.1| FLJ20035 protein [Homo sapiens] 65 1e-08
gi|50256319|gb|EAL19044.1| hypothetical protein CNBH1460 [Crypto... 65 1e-08
gi|15606531|ref|NP_213911.1| hypothetical protein aq_1328 [Aquif... 64 2e-08
gi|22091415|gb|AAL69489.2| putative RNA helicase [Arabidopsis th... 64 2e-08
gi|23613555|ref|NP_704576.1| DEAD/DEAH box helicase, putative [P... 64 2e-08
gi|34853214|ref|XP_228345.2| similar to RNA helicase family [Rat... 64 2e-08
gi|49090296|ref|XP_406619.1| hypothetical protein AN2482.2 [Aspe... 64 3e-08
gi|31242979|ref|XP_321922.1| ENSANGP00000013875 [Anopheles gambi... 64 3e-08
gi|9755332|ref|NP_011263.2| Meoisis specific DNA helicase involv... 64 4e-08
gi|2131277|pir||S61610 HFM1 protein - yeast (Saccharomyces cerev... 64 4e-08
gi|780546|gb|AAA93159.1| Hfm1p 64 4e-08
gi|17377416|sp|P51979|HFM1_YEAST ATP-dependent DNA helicase MER3... 64 4e-08
gi|23510204|ref|NP_702870.1| u5 small nuclear ribonucleoprotein-... 64 4e-08
gi|14520271|ref|NP_125746.1| ATP-dependent RNA helicase, putativ... 63 5e-08
gi|15485409|emb|CAC67631.1| probable DEAD/DEAH box helicase [Lei... 63 5e-08
gi|39583072|emb|CAE60612.1| Hypothetical protein CBG04253 [Caeno... 63 5e-08
gi|46124035|ref|XP_386571.1| hypothetical protein FG06395.1 [Gib... 63 6e-08
gi|37927528|gb|AAP70293.1| helicase-like protein [Escherichia coli] 63 6e-08
gi|32414435|ref|XP_327697.1| hypothetical protein [Neurospora cr... 62 8e-08
gi|17537519|ref|NP_497062.1| DEAD/DEAH box helicase and Sec63 do... 62 8e-08
gi|23485279|gb|EAA20330.1| DEAD/DEAH box helicase, putative [Pla... 62 8e-08
gi|50546779|ref|XP_500859.1| hypothetical protein [Yarrowia lipo... 62 8e-08
gi|19113352|ref|NP_596560.1| DEAD box helicase; with strong simi... 61 2e-07
gi|31322740|gb|AAP22927.1| RhrA [Rhodospirillum centenum] 60 3e-07
gi|15232253|ref|NP_189410.1| ATP-dependent DNA helicase, putativ... 60 4e-07
gi|16753094|ref|NP_445672.1| putative helicase [Sulfolobus islan... 60 4e-07
gi|47571734|ref|ZP_00241783.1| COG1204: Superfamily II helicase ... 60 4e-07
gi|46124913|ref|XP_387010.1| hypothetical protein FG06834.1 [Gib... 60 5e-07
gi|5114047|gb|AAD40191.1| putative RNA helicase [Homo sapiens] 59 7e-07
gi|41718942|ref|ZP_00147887.1| COG1202: Superfamily II helicase,... 59 7e-07
gi|46120966|ref|ZP_00201875.1| COG1204: Superfamily II helicase ... 59 7e-07
gi|29247934|gb|EAA39482.1| GLP_26_39935_43720 [Giardia lamblia A... 59 9e-07
gi|5103037|dbj|BAA78770.1| probable ATP-dependent RNA helicase [... 59 9e-07
gi|18311084|ref|NP_563018.1| probable ATP-dependent RNA helicase... 59 9e-07
gi|28211047|ref|NP_781991.1| mitochondrial ATP-dependent RNA hel... 57 3e-06
gi|42657015|ref|XP_376353.1| similar to hypothetical protein FLJ... 57 3e-06
gi|23509592|ref|NP_702259.1| RNA helicase, putative [Plasmodium ... 57 3e-06
gi|29247933|gb|EAA39481.1| GLP_26_36454_39915 [Giardia lamblia A... 57 3e-06
gi|50761272|ref|XP_419251.1| PREDICTED: similar to kelch-like 12... 57 3e-06
gi|9294478|dbj|BAB02697.1| helicase-like protein [Arabidopsis th... 57 3e-06
gi|16124910|ref|NP_419474.1| photosynthesis protein modulator [C... 57 4e-06
gi|37678453|ref|NP_933062.1| hypothetical protein VV0269 [Vibrio... 57 4e-06
gi|50746188|ref|XP_420395.1| PREDICTED: similar to hypothetical ... 57 4e-06
gi|16550364|dbj|BAB70966.1| unnamed protein product [Homo sapiens] 56 8e-06
gi|22957891|ref|ZP_00005576.1| COG0513: Superfamily II DNA and R... 56 8e-06
gi|38106659|gb|EAA52939.1| hypothetical protein MG06067.4 [Magna... 56 8e-06
gi|47572683|ref|ZP_00242725.1| COG1201: Lhr-like helicases [Rubr... 56 8e-06
gi|17555442|ref|NP_498252.1| DEAD/DEAH box helicase and helicase... 56 8e-06
gi|15890002|ref|NP_355683.1| AGR_C_4993p [Agrobacterium tumefaci... 56 8e-06
gi|19074342|ref|NP_585848.1| PRE-mRNA SPLICING HELICASE [Encepha... 56 8e-06
gi|15967013|ref|NP_387366.1| CONSERVED HYPOTHETICAL PROTEIN [Sin... 55 1e-05
gi|39933568|ref|NP_945844.1| possible MgpS, ATP-dependent helica... 55 1e-05
gi|29246818|gb|EAA38401.1| GLP_0_26994_31778 [Giardia lamblia AT... 55 1e-05
gi|41146747|ref|XP_037817.7| similar to hypothetical protein FLJ... 55 1e-05
gi|27375270|ref|NP_766799.1| ATP-dependent helicase [Bradyrhizob... 55 2e-05
gi|48850309|ref|ZP_00304551.1| COG0513: Superfamily II DNA and R... 55 2e-05
gi|47095885|ref|ZP_00233489.1| DEAD/DEAH box helicase domain pro... 54 2e-05
gi|17986559|ref|NP_539193.1| ATP-DEPENDENT DNA HELICASE [Brucell... 54 3e-05
gi|15894065|ref|NP_347414.1| ATP-dependent RNA helicase, superfa... 54 4e-05
gi|23014814|ref|ZP_00054612.1| COG0513: Superfamily II DNA and R... 54 4e-05
gi|38104038|gb|EAA50661.1| hypothetical protein MG04420.4 [Magna... 53 5e-05
gi|50798185|ref|XP_428333.1| PREDICTED: similar to U5 snRNP-spec... 53 5e-05
gi|1103724|emb|CAA90562.1| MgpS [Rhodobacter sphaeroides] 53 5e-05
gi|32411479|ref|XP_326220.1| hypothetical protein [Neurospora cr... 53 6e-05
gi|49077526|ref|XP_402612.1| hypothetical protein UM04997.1 [Ust... 53 6e-05
gi|48766439|ref|ZP_00270989.1| COG0513: Superfamily II DNA and R... 53 6e-05
gi|17861876|gb|AAL39415.1| GM09620p [Drosophila melanogaster] 53 6e-05
gi|46446583|ref|YP_007948.1| conserved hypothetical protein [Par... 52 8e-05
gi|19074505|ref|NP_586011.1| HFM1-LIKE ATP-DEPENDENT RNA HELICAS... 52 8e-05
gi|23128170|ref|ZP_00110024.1| COG1201: Lhr-like helicases [Nost... 51 2e-04
gi|34878035|ref|XP_341427.1| similar to DEAD/DEAH box helicase a... 51 2e-04
gi|46203070|ref|ZP_00052136.2| COG0513: Superfamily II DNA and R... 51 2e-04
gi|15964294|ref|NP_384647.1| PUTATIVE ATP-DEPENDENT HELICASE PRO... 51 2e-04
gi|17230823|ref|NP_487371.1| ATP-dependent helicase [Nostoc sp. ... 51 2e-04
gi|7469100|pir||T17399 probable DEAH ATP-dependent helicase vrlS... 51 2e-04
gi|21224937|ref|NP_630716.1| putative ATP-dependent helicase [St... 50 3e-04
gi|48478266|ref|YP_023972.1| ATP-dependent RNA helicase [Picroph... 50 3e-04
gi|11499982|ref|NP_071228.1| ATP-dependent RNA helicase, putativ... 50 4e-04
gi|34497544|ref|NP_901759.1| probable ATP-dependent RNA helicase... 50 4e-04
gi|14521327|ref|NP_126802.1| large helicase-related protein [Pyr... 50 5e-04
gi|46135621|ref|ZP_00163140.2| COG1201: Lhr-like helicases [Anab... 50 5e-04
gi|38110290|gb|EAA56031.1| hypothetical protein MG01682.4 [Magna... 49 7e-04
gi|48832969|ref|ZP_00289994.1| COG0513: Superfamily II DNA and R... 49 7e-04
gi|15802067|ref|NP_288089.1| member of ATP-dependent helicase su... 49 7e-04
gi|13473300|ref|NP_104867.1| MgpS, ATP-dependent helicase [Mesor... 49 7e-04
gi|45916795|ref|ZP_00195820.2| COG0513: Superfamily II DNA and R... 49 0.001
gi|28900445|ref|NP_800100.1| putative ATP-dependent RNA helicase... 49 0.001
gi|37575519|gb|AAQ93515.1| putative helicase [Streptomyces clavu... 49 0.001
gi|46255199|ref|YP_006111.1| hypothetical protein TTP0128 [Therm... 49 0.001
gi|39585946|emb|CAE68235.1| Hypothetical protein CBG13909 [Caeno... 49 0.001
gi|13474670|ref|NP_106239.1| probable ATP dependent DNA helicase... 49 0.001
gi|15678340|ref|NP_275455.1| ATP-dependent helicase [Methanother... 49 0.001
gi|42519636|ref|NP_965566.1| hypothetical protein LJ1760 [Lactob... 49 0.001
gi|46110126|ref|XP_382121.1| hypothetical protein FG01945.1 [Gib... 48 0.002
gi|23612314|ref|NP_703894.1| ATP-dependent DEAD box helicase, pu... 48 0.002
gi|23479098|gb|EAA16021.1| Helicase conserved C-terminal domain,... 48 0.002
gi|45200857|ref|NP_986427.1| AGL240Wp [Eremothecium gossypii] >g... 48 0.002
gi|15897072|ref|NP_341677.1| ATP-dependent helicase [Sulfolobus ... 48 0.002
gi|41103597|ref|XP_371267.1| similar to CG5205-PA [Homo sapiens] 48 0.002
gi|27366822|ref|NP_762349.1| Superfamily II DNA and RNA helicase... 48 0.002
gi|38080354|ref|XP_355631.1| similar to hypothetical protein [Mu... 48 0.002
gi|50756707|ref|XP_415285.1| PREDICTED: similar to DEAD-box prot... 48 0.002
gi|15920604|ref|NP_376273.1| 911aa long hypothetical ATP-depende... 48 0.002
gi|14590941|ref|NP_143015.1| ATP-dependent helicase LHR [Pyrococ... 48 0.002
gi|37676599|ref|NP_936995.1| DNA and RNA helicase [Vibrio vulnif... 48 0.002
gi|17934407|ref|NP_531197.1| large atp-dependant helicase-relate... 48 0.002
gi|15887841|ref|NP_353522.1| AGR_C_874p [Agrobacterium tumefacie... 48 0.002
gi|23002684|ref|ZP_00046358.1| COG1201: Lhr-like helicases [Lact... 47 0.003
gi|23619253|ref|NP_705215.1| helicase, putative [Plasmodium falc... 47 0.003
gi|19923595|ref|NP_076977.2| ATP-dependent RNA helicase MGC2835;... 47 0.004
gi|16129611|ref|NP_416170.1| member of ATP-dependent helicase su... 47 0.004
gi|38014855|gb|AAH05848.2| DDX54 protein [Homo sapiens] 47 0.004
gi|28301751|gb|AAN59978.1| DEAD box RNA helicase DP97 [Homo sapi... 47 0.004
gi|46576615|sp|Q8TDD1|DX54_HUMAN DEAD-box protein 54 (ATP-depend... 47 0.004
gi|46437842|gb|EAK97182.1| hypothetical protein CaO19.13786 [Can... 47 0.005
gi|50556074|ref|XP_505445.1| hypothetical protein [Yarrowia lipo... 47 0.005
gi|41614798|ref|NP_963296.1| NEQ003 [Nanoarchaeum equitans Kin4-... 46 0.006
gi|21673860|ref|NP_661925.1| ATP-dependent RNA helicase DeaD [Ch... 46 0.006
gi|30682998|ref|NP_193215.2| ATP-dependent RNA helicase, mitocho... 46 0.006
gi|7488179|pir||H71410 probable RNA helicase - Arabidopsis thali... 46 0.006
gi|16930459|gb|AAL31915.1| At1g20960/F9H16_5 [Arabidopsis thalia... 46 0.006
gi|48836470|ref|ZP_00293466.1| COG1201: Lhr-like helicases [Ther... 46 0.006
gi|18977423|ref|NP_578780.1| large helicase-related protein [Pyr... 46 0.006
gi|50120523|ref|YP_049690.1| probable ATP-dependent helicase [Er... 46 0.008
gi|39584972|emb|CAE64396.1| Hypothetical protein CBG09086 [Caeno... 46 0.008
gi|46205011|ref|ZP_00049170.2| COG1201: Lhr-like helicases [Magn... 46 0.008
gi|50258871|gb|EAL21554.1| hypothetical protein CNBD0220 [Crypto... 46 0.008
gi|7715993|gb|AAF68240.1| seroreactive antigen BMN1-5B [Babesia ... 45 0.010
gi|16079280|ref|NP_390104.1| yprA [Bacillus subtilis subsp. subt... 44 0.023
gi|27364385|ref|NP_759913.1| ATP-dependent DNA helicase RecQ [Vi... 44 0.023
gi|1536826|dbj|BAA11901.1| UORF6 [Shewanella violacea] 44 0.023
gi|37681371|ref|NP_935980.1| ATP-dependent DNA helicase RecQ [Vi... 44 0.023
gi|172798|gb|AAA35135.1| SUV3 44 0.030
gi|6325228|ref|NP_015296.1| ATP-dependent RNA helicase, componen... 44 0.030
gi|34582378|sp|O74727|SUV3_SACDO ATP-dependent RNA helicase SUV3... 44 0.030
gi|48835152|ref|ZP_00292153.1| COG1201: Lhr-like helicases [Ther... 44 0.030
gi|21955293|gb|AAL24152.2| putative ATP-dependent RNA helicase [... 44 0.030
gi|46142674|ref|ZP_00204383.1| COG1201: Lhr-like helicases [Meth... 44 0.039
gi|26327531|dbj|BAC27509.1| unnamed protein product [Mus musculus] 44 0.039
gi|14626299|gb|AAK71567.1| putative mitochondrial RNA helicase [... 44 0.039
gi|46192538|ref|ZP_00207326.1| COG0513: Superfamily II DNA and R... 44 0.039
gi|25148614|ref|NP_741348.1| ATP-dependent RNA helicase (4D454) ... 44 0.039
gi|11360512|pir||T31323 ATP-dependent RNA helicase, eIF-4A famil... 44 0.039
gi|25148619|ref|NP_741347.1| ATP-dependent RNA helicase (4D454) ... 44 0.039
gi|28076989|ref|NP_082317.1| DEAD (Asp-Glu-Ala-Asp) box polypept... 44 0.039
gi|26327389|dbj|BAC27438.1| unnamed protein product [Mus musculus] 44 0.039
gi|49095536|ref|XP_409229.1| hypothetical protein AN5092.2 [Aspe... 44 0.039
gi|27545287|ref|NP_775375.1| ATP-dependent RNA helicase homolog;... 43 0.051
gi|15242497|ref|NP_198800.1| ATP-dependent RNA helicase, mitocho... 43 0.066
gi|29349332|ref|NP_812835.1| ATP-dependent DNA helicase recG [Ba... 43 0.066
gi|18313289|ref|NP_559956.1| ATP-dependent helicase [Pyrobaculum... 43 0.066
gi|32492143|emb|CAE03376.1| OSJNBa0036B21.27 [Oryza sativa (japo... 43 0.066
gi|15614327|ref|NP_242630.1| ATP-dependent RNA helicase [Bacillu... 43 0.066
gi|48893276|ref|ZP_00326545.1| COG1205: Distinct helicase family... 43 0.066
gi|17988807|ref|NP_541440.1| ATP-DEPENDENT HELICASE [Brucella me... 43 0.066
gi|38344959|emb|CAD40979.2| OSJNBa0072F16.4 [Oryza sativa (japon... 43 0.066
gi|50424301|ref|XP_460737.1| unnamed protein product [Debaryomyc... 43 0.066
gi|50553154|ref|XP_503987.1| hypothetical protein [Yarrowia lipo... 43 0.066
gi|46132986|ref|XP_389198.1| hypothetical protein FG09022.1 [Gib... 43 0.066
gi|21224107|ref|NP_629886.1| putative ATP-dependent DNA helicase... 42 0.11
gi|46445068|gb|EAL04339.1| hypothetical protein CaO19.13412 [Can... 42 0.11
gi|15790306|ref|NP_280130.1| ATP-dependent helicase; HelA [Halob... 42 0.11
gi|46116372|ref|XP_384204.1| hypothetical protein FG04028.1 [Gib... 42 0.11
gi|46434331|gb|EAK93744.1| hypothetical protein CaO19.11994 [Can... 42 0.11
gi|32411491|ref|XP_326226.1| hypothetical protein [Neurospora cr... 42 0.11
gi|15921693|ref|NP_377362.1| 873aa long conserved hypothetical p... 42 0.15
gi|48850456|ref|ZP_00304698.1| COG1201: Lhr-like helicases [Novo... 42 0.15
gi|29349346|ref|NP_812849.1| ATP-dependent DNA helicase recQ [Ba... 42 0.15
gi|3599385|gb|AAC62691.1| ATP-dependent RNA helicase [Cenarchaeu... 41 0.19
gi|46363707|ref|ZP_00226419.1| COG1201: Lhr-like helicases [Kine... 41 0.19
gi|16762176|ref|NP_457793.1| ATP-dependent DNA helicase [Salmone... 41 0.19
gi|15897328|ref|NP_341933.1| ATP-dependent helicase [Sulfolobus ... 41 0.19
gi|50547433|ref|XP_501186.1| hypothetical protein [Yarrowia lipo... 41 0.19
gi|31981163|ref|NP_080136.2| DEAD (Asp-Glu-Ala-Asp) box polypept... 41 0.19
gi|12860207|dbj|BAB31877.1| unnamed protein product [Mus musculus] 41 0.19
gi|26344732|dbj|BAC36015.1| unnamed protein product [Mus musculus] 41 0.19
gi|50293791|ref|XP_449307.1| unnamed protein product [Candida gl... 41 0.19
gi|28575014|ref|NP_612028.4| CG32344-PA [Drosophila melanogaster... 41 0.19
gi|34541449|ref|NP_905928.1| ATP-dependent DNA helicase RecQ [Po... 41 0.19
gi|23500556|ref|NP_699996.1| ATP-dependent RNA helicase, DEAD/DE... 41 0.19
gi|47827092|dbj|BAD21122.1| ATP-dependent RNA helicase [Hordeum ... 41 0.19
gi|50307239|ref|XP_453598.1| unnamed protein product [Kluyveromy... 41 0.19
gi|6320173|ref|NP_010253.1| Dead box protein 10; Dbp10p [Sacchar... 41 0.19
gi|50312293|ref|XP_456179.1| unnamed protein product [Kluyveromy... 41 0.25
gi|50424991|ref|XP_461087.1| unnamed protein product [Debaryomyc... 41 0.25
gi|19859341|sp|P40724|RECQ_SALTY ATP-dependent DNA helicase recQ 41 0.25
gi|16767228|ref|NP_462843.1| ATP-dependent DNA helicase [Salmone... 41 0.25
gi|28899781|ref|NP_799386.1| ATP-dependent DNA helicase RecQ [Vi... 41 0.25
gi|29829042|ref|NP_823676.1| putative ATP-dependent DNA helicase... 41 0.25
gi|50305437|ref|XP_452678.1| unnamed protein product [Kluyveromy... 41 0.25
gi|30692489|ref|NP_174421.2| DNA helicase, putative (RECQl2) [Ar... 41 0.25
gi|46913221|emb|CAG20009.1| hypothetical ATP-dependent helicase ... 41 0.25
gi|49097204|ref|XP_410062.1| hypothetical protein AN5925.2 [Aspe... 40 0.33
gi|28872183|ref|NP_794802.1| ATP-dependent RNA helicase rhlE, pu... 40 0.33
gi|23469789|ref|ZP_00125123.1| COG0513: Superfamily II DNA and R... 40 0.33
gi|25169065|emb|CAD47901.1| DNA helicase-like protein [Arthrobac... 40 0.33
gi|48854053|ref|ZP_00308217.1| COG1201: Lhr-like helicases [Cyto... 40 0.33
gi|15921557|ref|NP_377226.1| 929aa long conserved hypothetical p... 40 0.33
gi|23102964|ref|ZP_00089459.1| COG0513: Superfamily II DNA and R... 40 0.33
gi|47223591|emb|CAF99200.1| unnamed protein product [Tetraodon n... 40 0.43
gi|30064881|ref|NP_839052.1| ATP-dependent DNA helicase [Shigell... 40 0.43
gi|46202850|ref|ZP_00052498.2| COG0513: Superfamily II DNA and R... 40 0.43
gi|21231754|ref|NP_637671.1| ATP-dependent DNA helicase [Xanthom... 40 0.43
gi|26987797|ref|NP_743222.1| ATP-dependent DNA helicase lhr, put... 40 0.43
gi|48097430|ref|XP_393782.1| similar to ENSANGP00000004546 [Apis... 40 0.43
gi|24115118|ref|NP_709628.1| ATP-dependent DNA helicase [Shigell... 40 0.43
gi|33865856|ref|NP_897415.1| putative ATP-dependent helicase [Sy... 40 0.43
>gi|17539644|ref|NP_502084.1| DEAD/DEAH box helicase and helicase,
C-terminal (4L900) [Caenorhabditis elegans]
gi|7498453|pir||T20487 hypothetical protein F01G4.3 - Caenorhabditis
elegans
gi|3875462|emb|CAA92767.1| Hypothetical protein F01G4.3
[Caenorhabditis elegans]
Length = 1260
Score = 2367 bits (6135), Expect = 0.0
Identities = 1210/1260 (96%), Positives = 1210/1260 (96%)
Frame = -1
Query: 3783 MCSYTISYYKVRVIIFLCNSAKIIFRQNPSAEFYNVADNLDSLLQPIDAPANIIAQVDSN 3604
MCSYTISYYKVRVIIFLCNSAKIIFRQNPSAEFYNVADNLDSLLQPIDAPANIIAQVDSN
Sbjct: 1 MCSYTISYYKVRVIIFLCNSAKIIFRQNPSAEFYNVADNLDSLLQPIDAPANIIAQVDSN 60
Query: 3603 GKIIGFVENERIIVGSANTSMSINRAPYKQRSLHTTAGNSIKGSPGNVPFLPGFLEELDD 3424
GKIIGFVENERIIVGSANTSMSINRAPYKQRSLHTTAGNSIKGSPGNVPFLPGFLEELDD
Sbjct: 61 GKIIGFVENERIIVGSANTSMSINRAPYKQRSLHTTAGNSIKGSPGNVPFLPGFLEELDD 120
Query: 3423 LLAGETTAKSTSGEESKFLSFKDDATLLNTIPTIGQIVLPNHSSVKKPAETPKSINIEEM 3244
LLAGETTAKSTSGEESKFLSFKDDATLLNTIPTIGQIVLPNHSSVKKPAETPKSINIEEM
Sbjct: 121 LLAGETTAKSTSGEESKFLSFKDDATLLNTIPTIGQIVLPNHSSVKKPAETPKSINIEEM 180
Query: 3243 DMFDLLDMVTSNEYIIHTVAAPVKKSESIESEETPEDDKKVSXXXXXXXXXXXXPGNTEK 3064
DMFDLLDMVTSNEYIIHTVAAPVKKSESIESEETPEDDKKVS PGNTEK
Sbjct: 181 DMFDLLDMVTSNEYIIHTVAAPVKKSESIESEETPEDDKKVSENEIDEIEIPIIPGNTEK 240
Query: 3063 VIEIFGAATEPTKEKFEFAQRLVLSADEEDEYKRLVPTMARKYPFSLDPFQQSSVLCMER 2884
VIEIFGAATEPTKEKFEFAQRLVLSADEEDEYKRLVPTMARKYPFSLDPFQQSSVLCMER
Sbjct: 241 VIEIFGAATEPTKEKFEFAQRLVLSADEEDEYKRLVPTMARKYPFSLDPFQQSSVLCMER 300
Query: 2883 GESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGLVT 2704
GESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGLVT
Sbjct: 301 GESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGLVT 360
Query: 2703 GDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVLIML 2524
GDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVLIML
Sbjct: 361 GDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVLIML 420
Query: 2523 PAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDRRPVPLEHFLYTGQDGKTQKDLF 2344
PAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDRRPVPLEHFLYTGQDGKTQKDLF
Sbjct: 421 PAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDRRPVPLEHFLYTGQDGKTQKDLF 480
Query: 2343 KIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXXXXXXXXXXXXXXXXXXXXXRNWPGKND 2164
KIIDRSGQFILKGYNDAKDSKAKIYEKEKA RNWPGKND
Sbjct: 481 KIIDRSGQFILKGYNDAKDSKAKIYEKEKAGGAGGRGTQRGGGRGGGGNGGGRNWPGKND 540
Query: 2163 KNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFFSQCVQR 1984
KNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFFSQCVQR
Sbjct: 541 KNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFFSQCVQR 600
Query: 1983 LKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAMGVN 1804
LKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAMGVN
Sbjct: 601 LKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAMGVN 660
Query: 1803 MPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDSTVPQPDVL 1624
MPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDSTVPQPDVL
Sbjct: 661 MPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDSTVPQPDVL 720
Query: 1623 KNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEKRKSLVDT 1444
KNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEKRKSLVDT
Sbjct: 721 KNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEKRKSLVDT 780
Query: 1443 KNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPKLNDENVINKLLCSGRFLIV 1264
KNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPKLNDENVINKLLCSGRFLIV
Sbjct: 781 KNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPKLNDENVINKLLCSGRFLIV 840
Query: 1263 NSAQQQLQNECVLLIKELNNKTLQILVASADADETTNKNAAAIGFSKLPKSELSWLTEEN 1084
NSAQQQLQNECVLLIKELNNKTLQILVASADADETTNKNAAAIGFSKLPKSELSWLTEEN
Sbjct: 841 NSAQQQLQNECVLLIKELNNKTLQILVASADADETTNKNAAAIGFSKLPKSELSWLTEEN 900
Query: 1083 SLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKGVQSGEILQEYNMTQIPR 904
SLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKGVQSGEILQEYNMTQIPR
Sbjct: 901 SLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKGVQSGEILQEYNMTQIPR 960
Query: 903 FRDRELSENVKKLLQQITTAVPGLKSGEIETYTWKELGSFCQNLDTSFDTDLLEKLEYNL 724
FRDRELSENVKKLLQQITTAVPGLKSGEIETYTWKELGSFCQNLDTSFDTDLLEKLEYNL
Sbjct: 961 FRDRELSENVKKLLQQITTAVPGLKSGEIETYTWKELGSFCQNLDTSFDTDLLEKLEYNL 1020
Query: 723 NLPQSFPARHCTRFDEHFSVLRDRIRIERKIXXXXXXXXXXXXXXXXEYHNRLKVLEALN 544
NLPQSFPARHCTRFDEHFSVLRDRIRIERKI EYHNRLKVLEALN
Sbjct: 1021 NLPQSFPARHCTRFDEHFSVLRDRIRIERKIESLEYELSSDALLLSEEYHNRLKVLEALN 1080
Query: 543 FVEQKMVSLKGRIGCEIHHQELLITELILDYKFHQRSPAELAALLSTLTCQYNSGREMQF 364
FVEQKMVSLKGRIGCEIHHQELLITELILDYKFHQRSPAELAALLSTLTCQYNSGREMQF
Sbjct: 1081 FVEQKMVSLKGRIGCEIHHQELLITELILDYKFHQRSPAELAALLSTLTCQYNSGREMQF 1140
Query: 363 GGDTVFGEISESVKSVLTRLESVASKHKSQISDLGCEIRFDLMEVVYEWANGTPFYQIME 184
GGDTVFGEISESVKSVLTRLESVASKHKSQISDLGCEIRFDLMEVVYEWANGTPFYQIME
Sbjct: 1141 GGDTVFGEISESVKSVLTRLESVASKHKSQISDLGCEIRFDLMEVVYEWANGTPFYQIME 1200
Query: 183 MTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSASIRRDIVFAASLYTTV 4
MTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSASIRRDIVFAASLYTTV
Sbjct: 1201 MTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSASIRRDIVFAASLYTTV 1260
>gi|39593718|emb|CAE62010.1| Hypothetical protein CBG06018
[Caenorhabditis briggsae]
Length = 1266
Score = 1823 bits (4723), Expect(2) = 0.0
Identities = 928/1252 (74%), Positives = 1048/1252 (83%), Gaps = 15/1252 (1%)
Frame = -1
Query: 3714 IFRQNPSAEFYNVADNLDSLLQPIDAPANIIAQVDSNGKIIGFVENERIIVGSANTSMSI 3535
I +Q+PS EF+NVA+NLDSLLQ IDAPANI+ +VDSNGKI GF E ER++VGSANTSMSI
Sbjct: 30 ISKQDPSLEFHNVANNLDSLLQSIDAPANIVPKVDSNGKIAGFEEYERVVVGSANTSMSI 89
Query: 3534 NRAPYKQRSLHTTAGNSIKGSPGNVPFLPGFLEELDDLLAGETTAKSTSGEESKFLSFKD 3355
NRAP+KQ+SLHT+A NSIKGSPGNVPF+PGFLEE+++++ G S G E K+L+F D
Sbjct: 90 NRAPFKQKSLHTSALNSIKGSPGNVPFIPGFLEEIEEMM-GNKEKSSNGGGELKYLNFSD 148
Query: 3354 DATLLNTIPTIGQIVLPNHSSVKKPAE----TPKSINIEEMDMFDLLDMVTSNEYIIHTV 3187
+A LLN++PT+G+I +P +KK + T + ++ D+FD L+M+ S+EY +
Sbjct: 149 EADLLNSVPTLGRIKIPEIVPLKKEEKEVVHTEVAKPVDTSDVFDFLNMLNSDEYTVVEK 208
Query: 3186 AAPVKKSESIESEETPE----DDKKVSXXXXXXXXXXXXPGNTEKVIE---IFGAA-TEP 3031
KK E I ++ E DD ++S N +++ IFG +
Sbjct: 209 PKTSKKVEDIPIDKPIEIAEQDDNEIS--------------NLPEIVTKPYIFGEVISNK 254
Query: 3030 TKEKFEFAQRLVLSADEEDEYKRLVPTMARKYPFSLDPFQQSSVLCMERGESLFVAAHTS 2851
EKFE+A++L S EE+EY+RL+PTMARKYPF+LD FQQSSVLCMERGESLFVAAHTS
Sbjct: 255 PGEKFEYARKLEKSPGEEEEYQRLMPTMARKYPFTLDYFQQSSVLCMERGESLFVAAHTS 314
Query: 2850 AGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAAC 2671
AGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAAC
Sbjct: 315 AGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAAC 374
Query: 2670 LIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSA 2491
LIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSA
Sbjct: 375 LIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSA 434
Query: 2490 TVPNCVEFADWVGRIKNRKINVISTDRRPVPLEHFLYTGQDGKTQKDLFKIIDRSGQFIL 2311
TVPNCVEFADWVGRIKNRKINVISTD+RPVPLEHFLYTGQDGKTQ+DLFKIIDR GQFIL
Sbjct: 435 TVPNCVEFADWVGRIKNRKINVISTDKRPVPLEHFLYTGQDGKTQRDLFKIIDRDGQFIL 494
Query: 2310 KGYNDAKDSKAKIYEKEKAXXXXXXXXXXXXXXXXXXXXXXR---NWPGKNDKNIYLNLI 2140
KGYNDAKDSK K EKEKA NWPGKNDKNIYLNLI
Sbjct: 495 KGYNDAKDSKTKSNEKEKAGGSGGRGGSRGGGGMKRGGGNSGGGKNWPGKNDKNIYLNLI 554
Query: 2139 NYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFFSQCVQRLKGSDKEL 1960
N+MKC+DQLPMV+FVFSRKRCD+NAQML+SMNLTTEVEKQHVR FFSQC+QRLKGSDKEL
Sbjct: 555 NFMKCADQLPMVIFVFSRKRCDDNAQMLSSMNLTTEVEKQHVRTFFSQCIQRLKGSDKEL 614
Query: 1959 PQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAMGVNMPARCVVF 1780
PQVLTMR+LCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAMGVNMPARCVVF
Sbjct: 615 PQVLTMRELCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAMGVNMPARCVVF 674
Query: 1779 DSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDSTVPQPDVLKNLISGQA 1600
DSI KHDGTERR+LNPGEYTQMAGRAGRRGLD TGTV+IICKDS++P PDVLKN+ISGQA
Sbjct: 675 DSITKHDGTERRLLNPGEYTQMAGRAGRRGLDSTGTVVIICKDSSIPLPDVLKNVISGQA 734
Query: 1599 LRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEKRKSLVDTKNAIQTMS 1420
LRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEK+K+L + + A++ +
Sbjct: 735 LRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEKKKALCEMRRALEEVE 794
Query: 1419 TIECSTCSPNSQLRDYHDALAVFLRKSEHIWPKLNDENVINKLLCSGRFLIVNSAQQQLQ 1240
IEC TC+PNSQLRDYHDA+ F++K +IWPKLNDENVINKLL SGRFLIV SA QLQ
Sbjct: 795 PIECETCTPNSQLRDYHDAVIAFVQKRANIWPKLNDENVINKLLGSGRFLIVTSAHNQLQ 854
Query: 1239 NECVLLIKELNNKTLQILVASADADETTNKNAAAIGFSKLPKSELSWLTEENSLLSTSKF 1060
NEC LLIKELNNK++Q+L S D++ETT KN A+ FSKLPK++++WLTEEN +L T+K+
Sbjct: 855 NECALLIKELNNKSIQVLSVSKDSEETTQKNLKAVKFSKLPKTDINWLTEENQILGTTKY 914
Query: 1059 GTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKGVQSGEILQEYNMTQIPRFRDRELSE 880
GTRG A C +SFRL EIPLSGIVAV KK K VQS EILQEYNM QIPRFRDRE+SE
Sbjct: 915 GTRGVAQCPQTAQSFRLSEIPLSGIVAVTKKSIKNVQSAEILQEYNMLQIPRFRDREISE 974
Query: 879 NVKKLLQQITTAVPGLKSGEIETYTWKELGSFCQNLDTSFDTDLLEKLEYNLNLPQSFPA 700
+++KL+QQITT L S E+ETY+WKEL + CQNL+ SF+TD +E +E LNLP++FPA
Sbjct: 975 SIRKLMQQITTVSQQLASKELETYSWKELRAMCQNLELSFETDWMESIESELNLPKAFPA 1034
Query: 699 RHCTRFDEHFSVLRDRIRIERKIXXXXXXXXXXXXXXXXEYHNRLKVLEALNFVEQKMVS 520
RHCTRF +HF +LR+ +RIERK+ EY NRLKVLE+L FVE+KMVS
Sbjct: 1035 RHCTRFADHFDLLRNSVRIERKVKSLEYDLSSDALRLSDEYQNRLKVLESLGFVEKKMVS 1094
Query: 519 LKGRIGCEIHHQELLITELILDYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGE 340
LKGRIGCEIHHQELLITELILDYKFH+R+PAELAALLSTLTCQYN G+E+ F ++VF E
Sbjct: 1095 LKGRIGCEIHHQELLITELILDYKFHKRTPAELAALLSTLTCQYNCGKEVTFEPNSVFAE 1154
Query: 339 ISESVKSVLTRLESVASKHKSQISDLGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGL 160
I ESVKSVLTRLES ASKH++ ISD+GCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGL
Sbjct: 1155 ICESVKSVLTRLESEASKHRAHISDVGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGL 1214
Query: 159 IVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSASIRRDIVFAASLYTTV 4
IVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSASIRRDIVFAASLYTTV
Sbjct: 1215 IVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSASIRRDIVFAASLYTTV 1266
Score = 22.7 bits (47), Expect(2) = 0.0
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2
Query: 3782 CAPIPFHITK 3753
CAPIP HI+K
Sbjct: 23 CAPIPSHISK 32
>gi|34852185|ref|XP_215327.2| similar to superkiller viralicidic
activity 2-like [Rattus norvegicus]
Length = 1202
Score = 745 bits (1924), Expect = 0.0
Identities = 490/1269 (38%), Positives = 687/1269 (53%), Gaps = 25/1269 (1%)
Frame = -1
Query: 3741 IFLCNSAKIIFRQNP----------SAEFYNVADNLDSLLQPIDAPANIIAQVD---SNG 3601
++LC A+ +F +P SA + + SLL + P Q + G
Sbjct: 10 LYLCQEAEQLFLSSPAWLPLHGVEHSARKWQRKTDPWSLLAALGTPVPSDLQAQRHPTTG 69
Query: 3600 KIIGF----VENERIIVGSANTSMSINRAPYKQRSLHTTAGNSIKGSPGNVPFLPGFLEE 3433
I+G+ +EN + SA TS+S+ R P A S+ G+P PF PG ++E
Sbjct: 70 HILGYKEVLLENTNL---SATTSLSLRRPP-------GPASQSLWGNPTQYPFWPGGMDE 119
Query: 3432 LDDLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTIGQIVLPNHSSVKKPAETPKSINI 3253
T ST E + + F+ D L T+P G ++ S PA P +++
Sbjct: 120 ------PSITDLSTREEAEEEIDFEKD---LLTVPP-GFKKGGDYCSSDHPAPVPGLLSL 169
Query: 3252 EEMDMFDLLDMVTSNEYIIHTVAAPVKKSESIESEETPEDDKKVSXXXXXXXXXXXXPGN 3073
+ + LD+ +E P + S TP
Sbjct: 170 SRL--LEPLDLSGGDEGEGEAAGGPRGDAASASPSSTP--------LIRASSLEDLVLKE 219
Query: 3072 TEKVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYKRLVPTMARKYPFSLDPFQQSSVLC 2893
V+ P +E ++A + +++ D Y RL+P A ++ F D FQ+ ++L
Sbjct: 220 ASTVVSTLEPLKPPPQE--QWAVPVDVTSPVGDFY-RLIPQPAFQWAFEPDVFQKQAILH 276
Query: 2892 MERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVG 2713
+E+ +S+FVAAHTSAGKTVVAEYAIAL Q H TR +YTSPIKALSNQKFRDF+ FGDVG
Sbjct: 277 LEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVG 336
Query: 2712 LVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVL 2533
L+TGD+QLHPEA+CLIMTTEILRSMLY+GS+VIRDLEWV+FDEVHYIN+ ERG VWEEVL
Sbjct: 337 LLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVL 396
Query: 2532 IMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDRRPVPLEHFLYTGQDGKTQK 2353
IMLP HV I++LSATVPN +EFADW+GR+K R+I VIST RPVPLEH+L+TG KTQ
Sbjct: 397 IMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHYLFTGNSPKTQG 456
Query: 2352 DLFKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXXXXXXXXXXXXXXXXXXXXXRNWPG 2173
+LF ++D G F KGY A ++K + K
Sbjct: 457 ELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQPTHQGGPA------------- 503
Query: 2172 KNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFFSQC 1993
D+ +YL L+ ++ QLP+VVF FSR RCDE A L S++LTT EK + LF +C
Sbjct: 504 -QDRGVYLALLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRC 562
Query: 1992 VQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAM 1813
+ RL+GSD++LPQVL M +L RG VHHSGILPILKE+VE+LF +G VK+LFATETFAM
Sbjct: 563 LARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAM 622
Query: 1812 GVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDSTVPQP 1633
GVNMPAR VVFDS+ KHDG+ R L PGEY QMAGRAGRRGLD TGTVI++CK VP+
Sbjct: 623 GVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK-GRVPEM 681
Query: 1632 DVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEKRKSL 1453
L ++ G+ +L+S+FR+TY+MILNLLRV+ L++EDM++RS+ E S ++SK ++L
Sbjct: 682 ADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQAL 741
Query: 1452 VDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPKLNDENVINKLLCSGRF 1273
D + + E + L +Y+ I ++ + K L GR
Sbjct: 742 ADLTKRLGALE--EPDVTGQLADLPEYYSWAEELTETRNMIQRRIMESVNGLKSLSVGRV 799
Query: 1272 LIVNSAQQQLQNECVLLIKELNNKTLQILVASADADETTNKNAAAIGFSKLPKSE---LS 1102
++V + ++ N ++++ +N T ++ D+ S+ P+ +
Sbjct: 800 VVVKN--EEHHNALGVILQVSSNSTSRVFTTLVLCDKP--------AVSENPRDKGPATP 849
Query: 1101 WLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKGVQSGEILQEYN 922
+ + L+ F G C + + G VA + V +I ++++
Sbjct: 850 DVPHPDDLVGFKLFLPEGP--CEHTVAKLQ------PGDVAAISTKVLRVNGEKISEDFS 901
Query: 921 MTQIPRFRDRELSENVKKLLQQITTAVPGLKSGEIETYTWKELGSFCQNLDTSFDTDLL- 745
Q P+FR V +Q++ +G +L Q D + L
Sbjct: 902 KRQQPKFRKDPPLAAVTTAVQELLRLAQAYPAGPPTLDPINDL----QLKDVAVVEGGLR 957
Query: 744 -EKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERKIXXXXXXXXXXXXXXXXEYHNR 568
KLE L + H RF + L++R++I++++ EYH R
Sbjct: 958 ARKLE---ELIRGAQCVHSPRFPAQYVKLQERMQIQKEMERLRFLLSDQSLLLLPEYHQR 1014
Query: 567 LKVLEALNFVEQK-MVSLKGRIGCEIHHQELLITELILDYKFHQRSPAELAALLSTLTCQ 391
++VL L +V++ V L GR+ C + ELL+TEL+ D P E+AALLS L CQ
Sbjct: 1015 VEVLRTLGYVDEAGTVKLAGRVACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQ 1074
Query: 390 YNSGREMQFGGDTVFGEISESVKSVLTRL--ESVASKHKSQISDLGCEIRFDLMEVVYEW 217
Q G E VK+V R+ VA + + E+ F L+EVVYEW
Sbjct: 1075 SPGDPGDQLPSTLKQG--VERVKAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEW 1132
Query: 216 ANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSASIRRD 37
A G PF ++ ++ EGL+V+CIQRL E+C+ +R A R+VG+P L KME + +RRD
Sbjct: 1133 ARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRD 1192
Query: 36 IVFAASLYT 10
IVFAASLYT
Sbjct: 1193 IVFAASLYT 1201
>gi|7671650|emb|CAB89307.1| dJ34F7.7 (superkiller viralicidic activity
2 (S. cerevisiae homolog)-like (SKI2W)) [Homo sapiens]
Length = 1245
Score = 744 bits (1922), Expect = 0.0
Identities = 485/1231 (39%), Positives = 683/1231 (55%), Gaps = 14/1231 (1%)
Frame = -1
Query: 3660 SLLQPIDAPANIIAQVD---SNGKIIGF----VENERIIVGSANTSMSINRAPYKQRSLH 3502
SLL + AP Q + G+I+G+ +EN + SA TS+S+ R P
Sbjct: 88 SLLAVLGAPVPSDLQAQRHPTTGQILGYKEVLLENTNL---SATTSLSLRRPP------- 137
Query: 3501 TTAGNSIKGSPGNVPFLPGFLEELDDLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTI 3322
A S+ G+P PF PG ++E T +T E + + F+ D L TIP
Sbjct: 138 GPASQSLWGNPTQYPFWPGGMDE------PTITDLNTREEAEEEIDFEKD---LLTIPPG 188
Query: 3321 GQIVLPNHSSVKKPAETPKSINIEEMDMFDLLDMVTSNEYIIHTVAAPV-KKSESIESEE 3145
+ K TP + M + LD+ +E V P + +++ +
Sbjct: 189 FK---KGMDFAPKDCPTPAPGLLSLSCMLEPLDLGGGDEDENEAVGQPGGPRGDTVSASP 245
Query: 3144 TPEDDKKVSXXXXXXXXXXXXPGNTEKVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYK 2965
+ S +T + E P++E++ V + ++
Sbjct: 246 CSAPLARASSLEDLVLKEASTAVSTPEAPE------PPSQEQWAIP---VDATSPVGDFY 296
Query: 2964 RLVPTMARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAV 2785
RL+P A ++ F D FQ+ ++L +ER +S+FVAAHTSAGKTVVAEYAIAL Q H TR +
Sbjct: 297 RLIPQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTI 356
Query: 2784 YTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDL 2605
YTSPIKALSNQKFRDF+ FGDVGL+TGD+QLHPEA+CLIMTTEILRSMLY+GS+VIRDL
Sbjct: 357 YTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDL 416
Query: 2604 EWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINV 2425
EWV+FDEVHYIN+ ERG VWEEVLIMLP HV I++LSATVPN +EFADW+GR+K R+I V
Sbjct: 417 EWVIFDEVHYINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYV 476
Query: 2424 ISTDRRPVPLEHFLYTGQDGKTQKDLFKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXX 2245
IST RPVPLEH+L+TG KTQ +LF ++D G F KGY A ++K + K
Sbjct: 477 ISTVTRPVPLEHYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFG 536
Query: 2244 XXXXXXXXXXXXXXXXXXXRNWPGKNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENA 2065
D+ +YL+L+ ++ QLP+VVF FSR RCDE A
Sbjct: 537 AKQPTHQGGPA--------------QDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQA 582
Query: 2064 QMLASMNLTTEVEKQHVRLFFSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPIL 1885
L S++LTT EK + LF +C+ RL+GSD++LPQVL M +L RG VHHSGILPIL
Sbjct: 583 SGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPIL 642
Query: 1884 KEVVELLFQKGYVKILFATETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGR 1705
KE+VE+LF +G VK+LFATETFAMGVNMPAR VVFDS+ KHDG+ R L PGEY QMAGR
Sbjct: 643 KEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGR 702
Query: 1704 AGRRGLDLTGTVIIICKDSTVPQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKI 1525
AGRRGLD TGTVI++CK VP+ L ++ G+ +L+S+FR+TY+MILNLLRV+ L++
Sbjct: 703 AGRRGLDPTGTVILLCK-GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRV 761
Query: 1524 EDMLQRSYVESDSLRESKEKRKSLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLR 1345
EDM++RS+ E S ++SK ++L + + + E L +Y+ + L
Sbjct: 762 EDMMKRSFSEFPSRKDSKAHEQALAELTKRLGALE--EPDMTGQLVDLPEYY-SWGEELT 818
Query: 1344 KSEHIWPKLNDENVIN-KLLCSGRFLIVNSAQQQLQNECVLLIKELNNKTLQILVASADA 1168
+++H+ + E+V K L +GR ++V + Q+ N ++++ +N T ++
Sbjct: 819 ETQHMIQRRIMESVNGLKSLSAGRVVVVKN--QEHHNALGVILQVSSNSTSRVFTTLVLC 876
Query: 1167 DETTNKNAAAIGFSKLPKSELSWLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSG 988
D+ +++ G + + + L+ F G C + + G
Sbjct: 877 DKPLSQDPQDRG------PATAEVPYPDDLVGFKLFLPEGP--CDHTVVKLQ------PG 922
Query: 987 IVAVMKKCAKGVQSGEILQEYNMTQIPRFRDRELSENVKKLLQQITTAVPGLKSGEIETY 808
+A + V +IL++++ Q P+F+ V +Q++ +G
Sbjct: 923 DMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLD 982
Query: 807 TWKELGSFCQNLDTSFDTDLL--EKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERK 634
+L Q D S L KLE L Q H RF + LR+R++I+++
Sbjct: 983 PVNDL----QLKDMSVVEGGLRARKLE---ELIQGAQCVHSPRFPAQYLKLRERMQIQKE 1035
Query: 633 IXXXXXXXXXXXXXXXXEYHNRLKVLEALNFVEQK-MVSLKGRIGCEIHHQELLITELIL 457
+ EYH R++VL L +V++ V L GR+ C + ELL+TEL+
Sbjct: 1036 MERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHELLLTELMF 1095
Query: 456 DYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRL--ESVASKH 283
D P E+AALLS L CQ Q G E V++V R+ VA
Sbjct: 1096 DNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQG--IERVRAVAKRIGEVQVACGL 1153
Query: 282 KSQISDLGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAG 103
+ + E+ F L+EVVYEWA G PF ++ ++ EGL+V+CIQRL E+C+ +R A
Sbjct: 1154 NQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAA 1213
Query: 102 RIVGDPALVEKMEEVSASIRRDIVFAASLYT 10
R+VG+P L KME + +RRDIVFAASLYT
Sbjct: 1214 RLVGEPVLGAKMETAATLLRRDIVFAASLYT 1244
>gi|1362811|pir||S56752 helicase SKI2W - human
gi|4379045|emb|CAA88733.1| helicase [Homo sapiens]
Length = 1246
Score = 744 bits (1920), Expect = 0.0
Identities = 484/1231 (39%), Positives = 683/1231 (55%), Gaps = 14/1231 (1%)
Frame = -1
Query: 3660 SLLQPIDAPANIIAQVD---SNGKIIGF----VENERIIVGSANTSMSINRAPYKQRSLH 3502
SLL + AP Q + G+I+G+ +EN + SA TS+S+ R P
Sbjct: 89 SLLAVLGAPVPSDLQAQRHPTTGQILGYKEVLLENTNL---SATTSLSLRRPP------- 138
Query: 3501 TTAGNSIKGSPGNVPFLPGFLEELDDLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTI 3322
A S+ G+P PF PG ++E T +T E + + F+ D L TIP
Sbjct: 139 GPASQSLWGNPTRYPFWPGGMDE------PTITDLNTREEAEEEIDFEKD---LLTIPPG 189
Query: 3321 GQIVLPNHSSVKKPAETPKSINIEEMDMFDLLDMVTSNEYIIHTVAAPV-KKSESIESEE 3145
+ K TP + + + LD+ +E V P + +++ +
Sbjct: 190 FK---KGMDFAPKDCPTPAPGLLSLSCLLEPLDLGGGDEDENEAVGQPGGPRGDTVSASP 246
Query: 3144 TPEDDKKVSXXXXXXXXXXXXPGNTEKVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYK 2965
+ S +T + E P++E++ V + ++
Sbjct: 247 CSAPLARASSLEDLVLKEASTAVSTPEAPE------PPSQEQWAIP---VDATSPVGDFY 297
Query: 2964 RLVPTMARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAV 2785
RL+P A ++ F D FQ+ ++L +ER +S+FVAAHTSAGKTVVAEYAIAL Q H TR +
Sbjct: 298 RLIPQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTI 357
Query: 2784 YTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDL 2605
YTSPIKALSNQKFRDF+ FGDVGL+TGD+QLHPEA+CLIMTTEILRSMLY+GS+VIRDL
Sbjct: 358 YTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDL 417
Query: 2604 EWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINV 2425
EWV+FDEVHYIN+ ERG VWEEVLIMLP HV I++LSATVPN +EFADW+GR+K R+I V
Sbjct: 418 EWVIFDEVHYINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYV 477
Query: 2424 ISTDRRPVPLEHFLYTGQDGKTQKDLFKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXX 2245
IST RPVPLEH+L+TG KTQ +LF ++D G F KGY A ++K + K
Sbjct: 478 ISTVTRPVPLEHYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFG 537
Query: 2244 XXXXXXXXXXXXXXXXXXXRNWPGKNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENA 2065
D+ +YL+L+ ++ QLP+VVF FSR RCDE A
Sbjct: 538 AKQPTHQGGPA--------------QDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQA 583
Query: 2064 QMLASMNLTTEVEKQHVRLFFSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPIL 1885
L S++LTT EK + LF +C+ RL+GSD++LPQVL M +L RG VHHSGILPIL
Sbjct: 584 SGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLQMSELLNRGLGVHHSGILPIL 643
Query: 1884 KEVVELLFQKGYVKILFATETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGR 1705
KE+VE+LF +G VK+LFATETFAMGVNMPAR VVFDS+ KHDG+ R L PGEY QMAGR
Sbjct: 644 KEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGR 703
Query: 1704 AGRRGLDLTGTVIIICKDSTVPQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKI 1525
AGRRGLD TGTVI++CK VP+ L ++ G+ +L+S+FR+TY+MILNLLRV+ L++
Sbjct: 704 AGRRGLDPTGTVILLCK-GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRV 762
Query: 1524 EDMLQRSYVESDSLRESKEKRKSLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLR 1345
EDM++RS+ E S ++SK ++L + + + E L +Y+ + L
Sbjct: 763 EDMMKRSFSEFPSRKDSKAHEQALAELTKRLGALE--EPDMTGQLVDLPEYY-SWGEELT 819
Query: 1344 KSEHIWPKLNDENVIN-KLLCSGRFLIVNSAQQQLQNECVLLIKELNNKTLQILVASADA 1168
+++H+ + E+V K L +GR ++V + Q+ N ++++ +N T ++
Sbjct: 820 ETQHMIQRRIMESVNGLKSLSAGRVVVVKN--QEHHNALGVILQVSSNSTSRVFTTLVLC 877
Query: 1167 DETTNKNAAAIGFSKLPKSELSWLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSG 988
D+ +++ G + + + L+ F G C + + G
Sbjct: 878 DKPLSQDPQDRG------PATAEVPYPDDLVGFKLFLPEGP--CDHTVVKLQ------PG 923
Query: 987 IVAVMKKCAKGVQSGEILQEYNMTQIPRFRDRELSENVKKLLQQITTAVPGLKSGEIETY 808
+A + V +IL++++ Q P+F+ V +Q++ +G
Sbjct: 924 DMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLD 983
Query: 807 TWKELGSFCQNLDTSFDTDLL--EKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERK 634
+L Q D S L KLE L Q H RF + LR+R++I+++
Sbjct: 984 PVNDL----QLKDMSVVEGGLRARKLE---ELIQGAQCVHSPRFPAQYLKLRERMQIQKE 1036
Query: 633 IXXXXXXXXXXXXXXXXEYHNRLKVLEALNFVEQK-MVSLKGRIGCEIHHQELLITELIL 457
+ EYH R++VL L +V++ V L GR+ C + ELL+TEL+
Sbjct: 1037 MERLRFLLSDQSLLLFPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHELLLTELMF 1096
Query: 456 DYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRL--ESVASKH 283
D P E+AALLS L CQ Q G E V++V R+ VA
Sbjct: 1097 DNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQG--IERVRAVAKRIGEVQVACGL 1154
Query: 282 KSQISDLGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAG 103
+ + E+ F L+EVVYEWA G PF ++ ++ EGL+V+CIQRL E+C+ +R A
Sbjct: 1155 NQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAA 1214
Query: 102 RIVGDPALVEKMEEVSASIRRDIVFAASLYT 10
R+VG+P L KME + +RRDIVFAASLYT
Sbjct: 1215 RLVGEPVLGAKMETAATLLRRDIVFAASLYT 1245
>gi|3123284|sp|Q15477|SKIW_HUMAN Helicase SKI2W (Helicase-like
protein) (HLP)
Length = 1246
Score = 743 bits (1919), Expect = 0.0
Identities = 484/1231 (39%), Positives = 683/1231 (55%), Gaps = 14/1231 (1%)
Frame = -1
Query: 3660 SLLQPIDAPANIIAQVD---SNGKIIGF----VENERIIVGSANTSMSINRAPYKQRSLH 3502
SLL + AP Q + G+I+G+ +EN + SA TS+S+ R P
Sbjct: 89 SLLAVLGAPVPSDLQAQRHPTTGQILGYKEVLLENTNL---SATTSLSLRRPP------- 138
Query: 3501 TTAGNSIKGSPGNVPFLPGFLEELDDLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTI 3322
A S+ G+P PF PG ++E T +T E + + F+ D L TIP
Sbjct: 139 GPASQSLWGNPTRYPFWPGGMDE------PTITDLNTREEAEEEIDFEKD---LLTIPPG 189
Query: 3321 GQIVLPNHSSVKKPAETPKSINIEEMDMFDLLDMVTSNEYIIHTVAAPV-KKSESIESEE 3145
+ K TP + + + LD+ +E V P + +++ +
Sbjct: 190 FK---KGMDFAPKDCPTPAPGLLSLSCLLEPLDLGGGDEDENEAVGQPGGPRGDTVSASP 246
Query: 3144 TPEDDKKVSXXXXXXXXXXXXPGNTEKVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYK 2965
+ S +T + E P++E++ V + ++
Sbjct: 247 CSAPLARASSLEDLVLKEASTAVSTPEAPE------PPSQEQWAIP---VDATSPVGDFY 297
Query: 2964 RLVPTMARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAV 2785
RL+P A ++ F D FQ+ ++L +ER +S+FVAAHTSAGKTVVAEYAIAL Q H TR +
Sbjct: 298 RLIPQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTI 357
Query: 2784 YTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDL 2605
YTSPIKALSNQKFRDF+ FGDVGL+TGD+QLHPEA+CLIMTTEILRSMLY+GS+VIRDL
Sbjct: 358 YTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDL 417
Query: 2604 EWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINV 2425
EWV+FDEVHYIN+ ERG VWEEVLIMLP HV I++LSATVPN +EFADW+GR+K R+I V
Sbjct: 418 EWVIFDEVHYINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYV 477
Query: 2424 ISTDRRPVPLEHFLYTGQDGKTQKDLFKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXX 2245
IST RPVPLEH+L+TG KTQ +LF ++D G F KGY A ++K + K
Sbjct: 478 ISTVTRPVPLEHYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFG 537
Query: 2244 XXXXXXXXXXXXXXXXXXXRNWPGKNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENA 2065
D+ +YL+L+ ++ QLP+VVF FSR RCDE A
Sbjct: 538 AKQPTHQGGPA--------------QDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQA 583
Query: 2064 QMLASMNLTTEVEKQHVRLFFSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPIL 1885
L S++LTT EK + LF +C+ RL+GSD++LPQVL M +L RG VHHSGILPIL
Sbjct: 584 SGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPIL 643
Query: 1884 KEVVELLFQKGYVKILFATETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGR 1705
KE+VE+LF +G VK+LFATETFAMGVNMPAR VVFDS+ KHDG+ R L PGEY QMAGR
Sbjct: 644 KEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGR 703
Query: 1704 AGRRGLDLTGTVIIICKDSTVPQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKI 1525
AGRRGLD TGTVI++CK VP+ L ++ G+ +L+S+FR+TY+MILNLLRV+ L++
Sbjct: 704 AGRRGLDPTGTVILLCK-GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRV 762
Query: 1524 EDMLQRSYVESDSLRESKEKRKSLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLR 1345
EDM++RS+ E S ++SK ++L + + + E L +Y+ + L
Sbjct: 763 EDMMKRSFSEFPSRKDSKAHEQALAELTKRLGALE--EPDMTGQLVDLPEYY-SWGEELT 819
Query: 1344 KSEHIWPKLNDENVIN-KLLCSGRFLIVNSAQQQLQNECVLLIKELNNKTLQILVASADA 1168
+++H+ + E+V K L +GR ++V + Q+ N ++++ +N T ++
Sbjct: 820 ETQHMIQRRIMESVNGLKSLSAGRVVVVKN--QEHHNALGVILQVSSNSTSRVFTTLVLC 877
Query: 1167 DETTNKNAAAIGFSKLPKSELSWLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSG 988
D+ +++ G + + + L+ F G C + + G
Sbjct: 878 DKPLSQDPQDRG------PATAEVPYPDDLVGFKLFLPEGP--CDHTVVKLQ------PG 923
Query: 987 IVAVMKKCAKGVQSGEILQEYNMTQIPRFRDRELSENVKKLLQQITTAVPGLKSGEIETY 808
+A + V +IL++++ Q P+F+ V +Q++ +G
Sbjct: 924 DMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLD 983
Query: 807 TWKELGSFCQNLDTSFDTDLL--EKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERK 634
+L Q D S L KLE L Q H RF + LR+R++I+++
Sbjct: 984 PVNDL----QLKDMSVVEGGLRARKLE---ELIQGAQCVHSPRFPAQYLKLRERMQIQKE 1036
Query: 633 IXXXXXXXXXXXXXXXXEYHNRLKVLEALNFVEQK-MVSLKGRIGCEIHHQELLITELIL 457
+ EYH R++VL L +V++ V L GR+ C + ELL+TEL+
Sbjct: 1037 MERLRFLLSDQSLLLFPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHELLLTELMF 1096
Query: 456 DYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRL--ESVASKH 283
D P E+AALLS L CQ Q G E V++V R+ VA
Sbjct: 1097 DNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQG--IERVRAVAKRIGEVQVACGL 1154
Query: 282 KSQISDLGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAG 103
+ + E+ F L+EVVYEWA G PF ++ ++ EGL+V+CIQRL E+C+ +R A
Sbjct: 1155 NQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAA 1214
Query: 102 RIVGDPALVEKMEEVSASIRRDIVFAASLYT 10
R+VG+P L KME + +RRDIVFAASLYT
Sbjct: 1215 RLVGEPVLGAKMETAATLLRRDIVFAASLYT 1245
>gi|2347134|gb|AAB67978.1| helicase [Homo sapiens]
Length = 1246
Score = 743 bits (1919), Expect = 0.0
Identities = 483/1231 (39%), Positives = 684/1231 (55%), Gaps = 14/1231 (1%)
Frame = -1
Query: 3660 SLLQPIDAPANIIAQVD---SNGKIIGF----VENERIIVGSANTSMSINRAPYKQRSLH 3502
SLL + AP Q + G+I+G+ +EN + SA TS+S+ R P
Sbjct: 89 SLLAVLGAPVPSDLQAQRHPTTGQILGYKEVLLENTNL---SATTSLSLRRPP------- 138
Query: 3501 TTAGNSIKGSPGNVPFLPGFLEELDDLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTI 3322
A S+ G+P PF PG ++E T +T E + + F+ D L TIP
Sbjct: 139 GPASQSLWGNPTRYPFWPGGMDE------PTITDLNTREEAEEEIDFEKD---LLTIPPG 189
Query: 3321 GQIVLPNHSSVKKPAETPKSINIEEMDMFDLLDMVTSNEYIIHTVAAPV-KKSESIESEE 3145
+ K TP + + + LD+ +E V P + +++ +
Sbjct: 190 FK---KGMDFAPKDCPTPAPGLLSLSCLLEPLDLGGGDEDENEAVGQPGGPRGDTVSASP 246
Query: 3144 TPEDDKKVSXXXXXXXXXXXXPGNTEKVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYK 2965
+ S +T + E P++E++ V + ++
Sbjct: 247 CSAPLARASSLEDLVLKEASTAVSTPEAPE------PPSQEQWAIP---VDATSPVGDFY 297
Query: 2964 RLVPTMARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAV 2785
RL+P A ++ F D FQ+ ++L +ER +S+FVAAHTSAGKTVVAEYAIAL Q H TR +
Sbjct: 298 RLIPQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTI 357
Query: 2784 YTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDL 2605
YTSPIKALSNQKFRDF+ FGDVGL+TGD+QLHPEA+CLIMTTEILRSMLY+GS+VIRDL
Sbjct: 358 YTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDL 417
Query: 2604 EWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINV 2425
EWV+FDEVHYIN+ ERG VWEEVLIMLP HV I++LSATVPN +EFADW+GR+K R+I V
Sbjct: 418 EWVIFDEVHYINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYV 477
Query: 2424 ISTDRRPVPLEHFLYTGQDGKTQKDLFKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXX 2245
IST RPVPLEH+L+TG KTQ +LF ++D G F KGY A ++K + K
Sbjct: 478 ISTVTRPVPLEHYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFG 537
Query: 2244 XXXXXXXXXXXXXXXXXXXRNWPGKNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENA 2065
D+ +YL+L+ ++ QLP+VVF FSR RCDE A
Sbjct: 538 AKQPTHQGGPA--------------QDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQA 583
Query: 2064 QMLASMNLTTEVEKQHVRLFFSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPIL 1885
L S++LTT EK + LF +C+ RL+GSD++LPQVL M +L RG VHHSGILPIL
Sbjct: 584 SGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPIL 643
Query: 1884 KEVVELLFQKGYVKILFATETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGR 1705
KE+VE+LF +G VK+LFATETFAMGVNMPAR VVFDS+ KHDG+ R L PGEY QMAGR
Sbjct: 644 KEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGR 703
Query: 1704 AGRRGLDLTGTVIIICKDSTVPQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKI 1525
AGRRGLD TGTVI++CK VP+ L ++ G+ +L+S+FR+TY+MILNLLRV+ L++
Sbjct: 704 AGRRGLDPTGTVILLCK-GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRV 762
Query: 1524 EDMLQRSYVESDSLRESKEKRKSLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLR 1345
EDM++RS+ E S ++SK ++L + + + E L +Y+ + L
Sbjct: 763 EDMMKRSFSEFPSRKDSKAHEQALAELTKRLGALE--EPDMTGQLVDLPEYY-SWGEELT 819
Query: 1344 KSEHIWPKLNDENVIN-KLLCSGRFLIVNSAQQQLQNECVLLIKELNNKTLQILVASADA 1168
+++H+ + E+V K L +GR ++V + Q+ N ++++ +N T ++
Sbjct: 820 ETQHMIQRRIMESVNGLKSLSAGRVVVVKN--QEHHNALGVILQVSSNSTSRVFTTLVLC 877
Query: 1167 DETTNKNAAAIGFSKLPKSELSWLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSG 988
D+ +++ G + + + L+ F G + ++
Sbjct: 878 DKPLSQDPQDRG------PATAEVPYPDDLVGFKLFLPEGPC-------DHTMVKLQPGD 924
Query: 987 IVAVMKKCAKGVQSGEILQEYNMTQIPRFRDRELSENVKKLLQQITTAVPGLKSGEIETY 808
+ A+ K + V +IL++++ Q P+F+ V +Q++ +G
Sbjct: 925 MAAITTKVLR-VNGEKILEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLD 983
Query: 807 TWKELGSFCQNLDTSFDTDLL--EKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERK 634
+L Q D S L KLE L Q H RF + LR+R++I+++
Sbjct: 984 PVNDL----QLKDMSVVEGGLRARKLE---ELIQGAQCVHSPRFPAQYLKLRERMQIQKE 1036
Query: 633 IXXXXXXXXXXXXXXXXEYHNRLKVLEALNFVEQ-KMVSLKGRIGCEIHHQELLITELIL 457
+ EYH R++VL L +V++ V L GR+ C + ELL+TEL+
Sbjct: 1037 MERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEVGTVKLAGRVACAMSSHELLLTELMF 1096
Query: 456 DYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRL--ESVASKH 283
D P E+AALLS L CQ Q G E V++V R+ VA
Sbjct: 1097 DNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQG--IERVRAVAKRIGEVQVACGL 1154
Query: 282 KSQISDLGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAG 103
+ + E+ F L+EVVYEWA G PF ++ ++ EGL+V+CIQRL E+C+ +R A
Sbjct: 1155 NQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAA 1214
Query: 102 RIVGDPALVEKMEEVSASIRRDIVFAASLYT 10
R+VG+P L KME + +RRDIVFAASLYT
Sbjct: 1215 RLVGEPVLGAKMETAATLLRRDIVFAASLYT 1245
>gi|1403336|emb|CAA67024.1| SKI2W protein [Homo sapiens]
Length = 1246
Score = 743 bits (1919), Expect = 0.0
Identities = 484/1231 (39%), Positives = 683/1231 (55%), Gaps = 14/1231 (1%)
Frame = -1
Query: 3660 SLLQPIDAPANIIAQVD---SNGKIIGF----VENERIIVGSANTSMSINRAPYKQRSLH 3502
SLL + AP Q + G+I+G+ +EN + SA TS+S+ R P
Sbjct: 89 SLLAVLGAPVPSDLQAQRHPTTGQILGYKEVLLENTNL---SATTSLSLRRPP------- 138
Query: 3501 TTAGNSIKGSPGNVPFLPGFLEELDDLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTI 3322
A S+ G+P PF PG ++E T +T E + + F+ D L TIP
Sbjct: 139 GPASQSLWGNPTQYPFWPGGMDE------PTITDLNTREEAEEEIDFEKD---LLTIPPG 189
Query: 3321 GQIVLPNHSSVKKPAETPKSINIEEMDMFDLLDMVTSNEYIIHTVAAPV-KKSESIESEE 3145
+ K TP + + + LD+ +E V P + +++ +
Sbjct: 190 FK---KGMDFAPKDCPTPAPGLLSLSCLLEPLDLGGGDEDENEAVGQPGGPRGDTVSASP 246
Query: 3144 TPEDDKKVSXXXXXXXXXXXXPGNTEKVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYK 2965
+ S +T + E P++E++ V + ++
Sbjct: 247 CSAPLARASSLEDLVLKEASTAVSTPEAPE------PPSQEQWAIP---VDATSPVGDFY 297
Query: 2964 RLVPTMARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAV 2785
RL+P A ++ F D FQ+ ++L +ER +S+FVAAHTSAGKTVVAEYAIAL Q H TR +
Sbjct: 298 RLIPQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTI 357
Query: 2784 YTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDL 2605
YTSPIKALSNQKFRDF+ FGDVGL+TGD+QLHPEA+CLIMTTEILRSMLY+GS+VIRDL
Sbjct: 358 YTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDL 417
Query: 2604 EWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINV 2425
EWV+FDEVHYIN+ ERG VWEEVLIMLP HV I++LSATVPN +EFADW+GR+K R+I V
Sbjct: 418 EWVIFDEVHYINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYV 477
Query: 2424 ISTDRRPVPLEHFLYTGQDGKTQKDLFKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXX 2245
IST RPVPLEH+L+TG KTQ +LF ++D G F KGY A ++K + K
Sbjct: 478 ISTVTRPVPLEHYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFG 537
Query: 2244 XXXXXXXXXXXXXXXXXXXRNWPGKNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENA 2065
D+ +YL+L+ ++ QLP+VVF FSR RCDE A
Sbjct: 538 AKQPTHQGGPA--------------QDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQA 583
Query: 2064 QMLASMNLTTEVEKQHVRLFFSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPIL 1885
L S++LTT EK + LF +C+ RL+GSD++LPQVL M +L RG VHHSGILPIL
Sbjct: 584 SGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPIL 643
Query: 1884 KEVVELLFQKGYVKILFATETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGR 1705
KE+VE+LF +G VK+LFATETFAMGVNMPAR VVFDS+ KHDG+ R L PGEY QMAGR
Sbjct: 644 KEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGR 703
Query: 1704 AGRRGLDLTGTVIIICKDSTVPQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKI 1525
AGRRGLD TGTVI++CK VP+ L ++ G+ +L+S+FR+TY+MILNLLRV+ L++
Sbjct: 704 AGRRGLDPTGTVILLCK-GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRV 762
Query: 1524 EDMLQRSYVESDSLRESKEKRKSLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLR 1345
EDM++RS+ E S ++SK ++L + + + E L +Y+ + L
Sbjct: 763 EDMMKRSFSEFPSRKDSKAHEQALAELTKRLGALE--EPDMTGQLVDLPEYY-SWGEELT 819
Query: 1344 KSEHIWPKLNDENVIN-KLLCSGRFLIVNSAQQQLQNECVLLIKELNNKTLQILVASADA 1168
+++H+ + E+V K L +GR ++V + Q+ N ++++ +N T ++
Sbjct: 820 ETQHMIQRRIMESVNGLKSLSAGRVVVVKN--QEHHNALGVILQVSSNSTSRVFTTLVLC 877
Query: 1167 DETTNKNAAAIGFSKLPKSELSWLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSG 988
D+ +++ G + + + L+ F G C + + G
Sbjct: 878 DKPLSQDPQDRG------PATAEVPYPDDLVGFKLFLPEGP--CDHTVVKLQ------PG 923
Query: 987 IVAVMKKCAKGVQSGEILQEYNMTQIPRFRDRELSENVKKLLQQITTAVPGLKSGEIETY 808
+A + V +IL++++ Q P+F+ V +Q++ +G
Sbjct: 924 DMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLD 983
Query: 807 TWKELGSFCQNLDTSFDTDLL--EKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERK 634
+L Q D S L KLE L Q H RF + LR+R++I+++
Sbjct: 984 PVNDL----QLKDMSVVEGGLRARKLE---ELIQGAQCVHSPRFPAQYLKLRERMQIQKE 1036
Query: 633 IXXXXXXXXXXXXXXXXEYHNRLKVLEALNFVEQK-MVSLKGRIGCEIHHQELLITELIL 457
+ EYH R++VL L +V++ V L GR+ C + ELL+TEL+
Sbjct: 1037 MERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHELLLTELMF 1096
Query: 456 DYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRL--ESVASKH 283
D P E+AALLS L CQ Q G E V++V R+ VA
Sbjct: 1097 DNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQG--IERVRAVAKRIGEVQVACGL 1154
Query: 282 KSQISDLGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAG 103
+ + E+ F L+EVVYEWA G PF ++ ++ EGL+V+CIQRL E+C+ +R A
Sbjct: 1155 NQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAA 1214
Query: 102 RIVGDPALVEKMEEVSASIRRDIVFAASLYT 10
R+VG+P L KME + +RRDIVFAASLYT
Sbjct: 1215 RLVGEPVLGAKMETAATLLRRDIVFAASLYT 1245
>gi|47208140|emb|CAF92300.1| unnamed protein product [Tetraodon
nigroviridis]
Length = 1120
Score = 743 bits (1918), Expect = 0.0
Identities = 461/1104 (41%), Positives = 628/1104 (56%), Gaps = 16/1104 (1%)
Frame = -1
Query: 3273 TPKSINIEEMDMFDLLDMVTSNEYIIHTVAAPVKKSESIESEETPEDDKKVSXXXXXXXX 3094
T K +N+ M + LD +T Y + E ES+E+ K
Sbjct: 92 TDKEVNL--MSLLSTLDDITDFRY----------EEEQQESKESNNAPKLPRTNSLEDLG 139
Query: 3093 XXXXPGNTEKVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYKRLVPTMARK-------- 2938
GN E E ++E ++A + +++ +D YKR +P A +
Sbjct: 140 IKVPQGNNET------EKKEKSEESKKWAIPVNITSPCDDFYKR-IPNPAFQGSSLIFFC 192
Query: 2937 -YPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPIKAL 2761
+PF LD FQ+ ++L +E +S+FVAAHTSAGKTVVAEYAIAL Q H TR +YTSPIKAL
Sbjct: 193 YWPFELDVFQKQAILRLEDHDSVFVAAHTSAGKTVVAEYAIALSQKHMTRTIYTSPIKAL 252
Query: 2760 SNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVFDEV 2581
SNQKFRDFK FGDVGL+TGD+Q+ PE++CLIMTTEILRSMLYNGSEVIRDLEWV+FDEV
Sbjct: 253 SNQKFRDFKNTFGDVGLLTGDVQISPESSCLIMTTEILRSMLYNGSEVIRDLEWVIFDEV 312
Query: 2580 HYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDRRPV 2401
HYIN+ ERG VWEEVLIMLP HV I++LSATVPN +EF++W+GRIK R I VIST +RPV
Sbjct: 313 HYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFSEWIGRIKKRHIYVISTMKRPV 372
Query: 2400 PLEHFLYTGQDGKTQKDLFKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXXXXXXXXXX 2221
PLEH+LYTG KTQK++F ++D +G F+ K Y A D+K KE++
Sbjct: 373 PLEHYLYTGNSSKTQKEMFLLVDAAGNFLNKAYYAAVDAK-----KERS---------SK 418
Query: 2220 XXXXXXXXXXXRNWPGKNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNL 2041
+N D+ ++L L++Y+ Q P+V F FSR RCDENA+ L SM+L
Sbjct: 419 HSQSFGTKNTSQNTTASQDRAVWLTLLHYLSARQQTPVVAFTFSRTRCDENARSLDSMDL 478
Query: 2040 TTEVEKQHVRLFFSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLF 1861
TT +EK + FF + + RL+G D++LPQ+L MRDL RG AVHHSGILPILKEV E+LF
Sbjct: 479 TTSIEKAEIHSFFQKSLSRLRGGDRQLPQILLMRDLLKRGIAVHHSGILPILKEVTEMLF 538
Query: 1860 QKGYVKILFATETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDL 1681
+G VK+LFATETFAMGVNMPAR VVFDSI KHDGT R L PGEY QMAGRAGRRGLD
Sbjct: 539 SRGLVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDA 598
Query: 1680 TGTVIIICKDSTVPQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSY 1501
TGTVII+CK D L ++ G+ L S+FR+TY+MILNLLRVE L++ DM++RS+
Sbjct: 599 TGTVIILCKAGVQEMAD-LHVMMMGKPTVLHSQFRLTYTMILNLLRVEALRVTDMMRRSF 657
Query: 1500 VESDSLRESKEKRKSLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPK 1321
S+S R+++ KS+ KN + ++ +++ T S L Y+ + SE +
Sbjct: 658 --SESHRDTQAHEKSISQLKNKLSSLPSLD--TEGQLSDLTAYYHTVTELRTTSETLRHA 713
Query: 1320 LNDENVINKLLCSGRFLIVNSAQQQLQNECVLLI-KELNNKTLQILVASADADETTNKNA 1144
+ + K L GR ++VN+ Q +L + + N+T L+ +E N+
Sbjct: 714 ILESVNGLKALSVGRVVVVNNKQHLNALGVILQVSSDAVNRTFTALIICEKGNEEGEGNS 773
Query: 1143 AAIGFSKLPKSELSWLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKC 964
A L +T+ F G CS ++ +L +I + +
Sbjct: 774 DAF----------------PHLFNTALFIPEGP--CSHTVQKLKLEDISSITVKTLR--- 812
Query: 963 AKGVQSGEILQEYNMTQIPRFRDRELSENVKKLLQQITTAVPGLKSGEIETYTWKELGSF 784
V I+ YN Q PRFR + + Q++ G +L
Sbjct: 813 ---VIPDRIIDNYNKRQQPRFRLDPPGQAISTATQELLRLAEANPGGLASLDPVNDLQ-- 867
Query: 783 CQNLDTSFDTDLLEKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERKIXXXXXXXXX 604
+++D + L L +L + F H RF E F+ +++R+ ++ ++
Sbjct: 868 LKSIDVVQASMRLRVLRDSL---KEFTCIHSPRFPEQFAQVKERMSMQEELNRLQFLVSD 924
Query: 603 XXXXXXXEYHNRLKVLEALNFVEQ-KMVSLKGRIGCEIHHQELLITELILDYKFHQRSPA 427
EYH R++VL+ L +++ V LKGR+ C+I ELL+TEL+ + +P
Sbjct: 925 QSLLLLPEYHQRIQVLQHLQYIDSGGAVQLKGRVACQISSHELLLTELLFENILSPLAPE 984
Query: 426 ELAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRLESVASKHK-----SQISDL 262
E AALLS L N+ E + + E + VL + + + +
Sbjct: 985 ESAALLSCLVFTQNAQVEPH-----ITHTLQEGINQVLAVAQRIGELQRDCGIPQTAEEF 1039
Query: 261 GCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPA 82
+ +F L EVVY WA G +Q +TD QEG +V+ IQRLDEV K+VR A RIVGD
Sbjct: 1040 VGQFKFGLTEVVYCWARGMRSHQ---LTDVQEGTVVRSIQRLDEVLKEVRQAARIVGDSV 1096
Query: 81 LVEKMEEVSASIRRDIVFAASLYT 10
L KME+ S +IRRDIVF ASLYT
Sbjct: 1097 LGSKMEKASLAIRRDIVFTASLYT 1120
>gi|20631987|ref|NP_008860.3| superkiller viralicidic activity 2-like
homolog; helicase SKI2W; 170A; superkiller viralicidic
activity 2 (S. cerevisiae homolog)-like [Homo sapiens]
gi|16041755|gb|AAH15758.1| Superkiller viralicidic activity 2-like
homolog [Homo sapiens]
Length = 1246
Score = 743 bits (1918), Expect = 0.0
Identities = 484/1231 (39%), Positives = 683/1231 (55%), Gaps = 14/1231 (1%)
Frame = -1
Query: 3660 SLLQPIDAPANIIAQVD---SNGKIIGF----VENERIIVGSANTSMSINRAPYKQRSLH 3502
SLL + AP Q + G+I+G+ +EN + SA TS+S+ R P
Sbjct: 89 SLLAVLGAPVPSDLQAQRHPTTGQILGYKEVLLENTNL---SATTSLSLRRPP------- 138
Query: 3501 TTAGNSIKGSPGNVPFLPGFLEELDDLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTI 3322
A S+ G+P PF PG ++E T +T E + + F+ D L TIP
Sbjct: 139 GPASQSLWGNPTRYPFWPGGMDE------PTITDLNTREEAEEEIDFEKD---LLTIPPG 189
Query: 3321 GQIVLPNHSSVKKPAETPKSINIEEMDMFDLLDMVTSNEYIIHTVAAPV-KKSESIESEE 3145
+ K TP + + + LD+ +E V P + +++ +
Sbjct: 190 FK---KGMDFAPKDCPTPAPGLLSLSCLLEPLDLGGGDEDENEAVGQPGGPRGDTVSASP 246
Query: 3144 TPEDDKKVSXXXXXXXXXXXXPGNTEKVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYK 2965
+ S +T + E P++E++ V + ++
Sbjct: 247 CSAPLARASSLEDLVLKEASTAVSTPEAPE------PPSQEQWAIP---VDATSPVGDFY 297
Query: 2964 RLVPTMARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAV 2785
RL+P A ++ F D FQ+ ++L +ER +S+FVAAHTSAGKTVVAEYAIAL Q H TR +
Sbjct: 298 RLIPQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTI 357
Query: 2784 YTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDL 2605
YTSPIKALSNQKFRDF+ FGDVGL+TGD+QLHPEA+CLIMTTEILRSMLY+GS+VIRDL
Sbjct: 358 YTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDL 417
Query: 2604 EWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINV 2425
EWV+FDEVHYIN+ ERG VWEEVLIMLP HV I++LSATVPN +EFADW+GR+K R+I V
Sbjct: 418 EWVIFDEVHYINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYV 477
Query: 2424 ISTDRRPVPLEHFLYTGQDGKTQKDLFKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXX 2245
IST RPVPLEH+L+TG KTQ +LF ++D G F KGY A ++K + K
Sbjct: 478 ISTVTRPVPLEHYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFG 537
Query: 2244 XXXXXXXXXXXXXXXXXXXRNWPGKNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENA 2065
D+ +YL+L+ ++ QLP+VVF FSR RCDE A
Sbjct: 538 AKQPTHQGGPA--------------QDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQA 583
Query: 2064 QMLASMNLTTEVEKQHVRLFFSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPIL 1885
L S++LTT EK + LF +C+ RL+GSD++LPQVL M +L RG VHHSGILPIL
Sbjct: 584 SGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPIL 643
Query: 1884 KEVVELLFQKGYVKILFATETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGR 1705
KE+VE+LF +G VK+LFATETFAMGVNMPAR VVFDS+ KHDG+ R L PGEY QMAGR
Sbjct: 644 KEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGR 703
Query: 1704 AGRRGLDLTGTVIIICKDSTVPQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKI 1525
AGRRGLD TGTVI++CK VP+ L ++ G+ +L+S+FR+TY+MILNLLRV+ L++
Sbjct: 704 AGRRGLDPTGTVILLCK-GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRV 762
Query: 1524 EDMLQRSYVESDSLRESKEKRKSLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLR 1345
EDM++RS+ E S ++SK ++L + + + E L +Y+ + L
Sbjct: 763 EDMMKRSFSEFPSRKDSKAHEQALAELTKRLGALE--EPDMTGQLVDLPEYY-SWGEELT 819
Query: 1344 KSEHIWPKLNDENVIN-KLLCSGRFLIVNSAQQQLQNECVLLIKELNNKTLQILVASADA 1168
+++H+ + E+V K L +GR ++V + Q+ N ++++ +N T ++
Sbjct: 820 ETQHMIQRRIMESVNGLKSLSAGRVVVVKN--QEHHNALGVILQVSSNSTSRVFTTLVLC 877
Query: 1167 DETTNKNAAAIGFSKLPKSELSWLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSG 988
D+ +++ G + + + L+ F G C + + G
Sbjct: 878 DKPLSQDPQDRG------PATAEVPYPDDLVGFKLFLPEGP--CDHTVVKLQ------PG 923
Query: 987 IVAVMKKCAKGVQSGEILQEYNMTQIPRFRDRELSENVKKLLQQITTAVPGLKSGEIETY 808
+A + V +IL++++ Q P+F+ V +Q++ +G
Sbjct: 924 DMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLD 983
Query: 807 TWKELGSFCQNLDTSFDTDLL--EKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERK 634
+L Q D S L KLE L Q H RF + LR+R++I+++
Sbjct: 984 PVNDL----QLKDMSVVEGGLRARKLE---ELIQGAQCVHSPRFPAQYLKLRERMQIQKE 1036
Query: 633 IXXXXXXXXXXXXXXXXEYHNRLKVLEALNFVEQ-KMVSLKGRIGCEIHHQELLITELIL 457
+ EYH R++VL L +V++ V L GR+ C + ELL+TEL+
Sbjct: 1037 MERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEVGTVKLAGRVACAMSSHELLLTELMF 1096
Query: 456 DYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRL--ESVASKH 283
D P E+AALLS L CQ Q G E V++V R+ VA
Sbjct: 1097 DNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQG--IERVRAVAKRIGEVQVACGL 1154
Query: 282 KSQISDLGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAG 103
+ + E+ F L+EVVYEWA G PF ++ ++ EGL+V+CIQRL E+C+ +R A
Sbjct: 1155 NQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAA 1214
Query: 102 RIVGDPALVEKMEEVSASIRRDIVFAASLYT 10
R+VG+P L KME + +RRDIVFAASLYT
Sbjct: 1215 RLVGEPVLGAKMETAATLLRRDIVFAASLYT 1245
>gi|1754827|gb|AAB52523.1| helicase-like protein [Homo sapiens]
Length = 1245
Score = 742 bits (1916), Expect = 0.0
Identities = 483/1231 (39%), Positives = 683/1231 (55%), Gaps = 14/1231 (1%)
Frame = -1
Query: 3660 SLLQPIDAPANIIAQVD---SNGKIIGF----VENERIIVGSANTSMSINRAPYKQRSLH 3502
SLL + AP Q + G+I+G+ +EN + SA TS+S+ R P
Sbjct: 88 SLLAVLGAPVPSDLQAQRHPTTGQILGYKEVLLENTNL---SATTSLSLRRPP------- 137
Query: 3501 TTAGNSIKGSPGNVPFLPGFLEELDDLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTI 3322
A S+ G+P PF PG ++E T +T E + + F+ D L TIP
Sbjct: 138 GPASQSLWGNPTQYPFWPGGMDE------PTITDLNTREEAEEEIDFEKD---LLTIPPG 188
Query: 3321 GQIVLPNHSSVKKPAETPKSINIEEMDMFDLLDMVTSNEYIIHTVAAPV-KKSESIESEE 3145
+ K TP + + + LD+ +E V P + +++ +
Sbjct: 189 FK---KGMDFAPKDCPTPAPGLLSLSCLLEPLDLGGGDEDENEAVGQPGGPRGDTVSASP 245
Query: 3144 TPEDDKKVSXXXXXXXXXXXXPGNTEKVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYK 2965
+ S +T + E P++E++ V + ++
Sbjct: 246 CSAPLARASSLEDLVLKEASTAVSTPEAPE------PPSQEQWAIP---VDATSPVGDFY 296
Query: 2964 RLVPTMARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAV 2785
RL+P A ++ F D FQ+ ++L +ER +S+FVAAHTSAGKTVVAEYAIAL Q H TR +
Sbjct: 297 RLIPQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTI 356
Query: 2784 YTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDL 2605
YTSPIKAL+NQKFRDF+ FGDVGL+TGD+QLHPEA+CLIMTTEILRSMLY+GS+VIRDL
Sbjct: 357 YTSPIKALTNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDL 416
Query: 2604 EWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINV 2425
EWV+FDEVHYIN+ ERG VWEEVLIMLP HV I++LSATVPN +EFADW+GR+K R+I V
Sbjct: 417 EWVIFDEVHYINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYV 476
Query: 2424 ISTDRRPVPLEHFLYTGQDGKTQKDLFKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXX 2245
IST RPVPLEH+L+TG KTQ +LF ++D G F KGY A ++K + K
Sbjct: 477 ISTVTRPVPLEHYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFG 536
Query: 2244 XXXXXXXXXXXXXXXXXXXRNWPGKNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENA 2065
D+ +YL+L+ ++ QLP+VVF FSR RCDE A
Sbjct: 537 AKQPTHQGGPA--------------QDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQA 582
Query: 2064 QMLASMNLTTEVEKQHVRLFFSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPIL 1885
L S++LTT EK + LF +C+ RL+GSD++LPQVL M +L RG VHHSGILPIL
Sbjct: 583 SGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPIL 642
Query: 1884 KEVVELLFQKGYVKILFATETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGR 1705
KE+VE+LF +G VK+LFATETFAMGVNMPAR VVFDS+ KHDG+ R L PGEY QMAGR
Sbjct: 643 KEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGR 702
Query: 1704 AGRRGLDLTGTVIIICKDSTVPQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKI 1525
AGRRGLD TGTVI++CK VP+ L ++ G+ +L+S+FR+TY+MILNLLRV+ L++
Sbjct: 703 AGRRGLDPTGTVILLCK-GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRV 761
Query: 1524 EDMLQRSYVESDSLRESKEKRKSLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLR 1345
EDM++RS+ E S ++SK ++L + + + E L +Y+ + L
Sbjct: 762 EDMMKRSFSEFPSRKDSKAHEQALAELTKRLGALE--EPDMTGQLVDLPEYY-SWGEELT 818
Query: 1344 KSEHIWPKLNDENVIN-KLLCSGRFLIVNSAQQQLQNECVLLIKELNNKTLQILVASADA 1168
+++H+ + E+V K L +GR ++V + Q+ N ++++ +N T ++
Sbjct: 819 ETQHMIQRRIMESVNGLKSLSAGRVVVVKN--QEHHNALGVILQVSSNSTSRVFTTLVLC 876
Query: 1167 DETTNKNAAAIGFSKLPKSELSWLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSG 988
D+ +++ G + + + L+ F G C + + G
Sbjct: 877 DKPLSQDPQDRG------PATAEVPYPDDLVGFKLFLPEGP--CDHTVVKLQ------PG 922
Query: 987 IVAVMKKCAKGVQSGEILQEYNMTQIPRFRDRELSENVKKLLQQITTAVPGLKSGEIETY 808
+A + V +IL++++ Q P+F+ V +Q++ +G
Sbjct: 923 DMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLD 982
Query: 807 TWKELGSFCQNLDTSFDTDLL--EKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERK 634
+L Q D S L KLE L Q H RF + LR+R++I+++
Sbjct: 983 PVNDL----QLKDMSVVEGGLRARKLE---ELIQGAQCVHSPRFPAQYLKLRERMQIQKE 1035
Query: 633 IXXXXXXXXXXXXXXXXEYHNRLKVLEALNFVEQK-MVSLKGRIGCEIHHQELLITELIL 457
+ EYH R++VL L +V++ V L GR+ C + ELL+TEL+
Sbjct: 1036 MERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHELLLTELMF 1095
Query: 456 DYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRL--ESVASKH 283
D P E+AALLS L CQ Q G E V++V R+ VA
Sbjct: 1096 DNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQG--IERVRAVAKRIGEVQVACGL 1153
Query: 282 KSQISDLGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAG 103
+ + E+ F L+EVVYEWA G PF ++ ++ EGL+V+CIQRL E+C+ +R A
Sbjct: 1154 NQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAA 1213
Query: 102 RIVGDPALVEKMEEVSASIRRDIVFAASLYT 10
R+VG+P L KME + +RRDIVFAASLYT
Sbjct: 1214 RLVGEPVLGAKMETAATLLRRDIVFAASLYT 1244
>gi|3395783|gb|AAC78607.1| putative RNA helicase Ski2w [Homo sapiens]
Length = 1246
Score = 742 bits (1916), Expect = 0.0
Identities = 483/1231 (39%), Positives = 683/1231 (55%), Gaps = 14/1231 (1%)
Frame = -1
Query: 3660 SLLQPIDAPANIIAQVD---SNGKIIGF----VENERIIVGSANTSMSINRAPYKQRSLH 3502
SLL + AP Q + G+I+G+ +EN + SA TS+S+ R P
Sbjct: 89 SLLAVLGAPVPSDLQAQRHPTTGQILGYKEVLLENTNL---SATTSLSLRRPP------- 138
Query: 3501 TTAGNSIKGSPGNVPFLPGFLEELDDLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTI 3322
A S+ G+P PF PG ++E T +T E + + F+ D L TIP
Sbjct: 139 GPASQSLWGNPTQYPFWPGGMDE------PTITDLNTREEAEEEIDFEKD---LLTIPPG 189
Query: 3321 GQIVLPNHSSVKKPAETPKSINIEEMDMFDLLDMVTSNEYIIHTVAAPV-KKSESIESEE 3145
+ K TP + + + LD+ +E V P + +++ +
Sbjct: 190 FK---KGMDFAPKDCPTPAPGLLSLSCLLEPLDLGGGDEDENEAVGQPGGPRGDTVSASP 246
Query: 3144 TPEDDKKVSXXXXXXXXXXXXPGNTEKVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYK 2965
+ S +T + E P++E++ V + ++
Sbjct: 247 CSAPLARASSLEDLVLKEASTAVSTPEAPE------PPSQEQWAIP---VDATSPVGDFY 297
Query: 2964 RLVPTMARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAV 2785
RL+P A ++ F D FQ+ ++L +ER +S+FVAAHTSAGKTVVAEYAIAL Q H TR +
Sbjct: 298 RLIPQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTI 357
Query: 2784 YTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDL 2605
YTSPIKALSNQKFRDF+ FGDVGL+TGD+QLHPEA+CLIMTTEILRSMLY+GS+VIRDL
Sbjct: 358 YTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDL 417
Query: 2604 EWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINV 2425
EWV+FDEVHYIN+ ERG VWEEVLIMLP HV I++LSATVPN +EFADW+GR+K R+I V
Sbjct: 418 EWVIFDEVHYINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYV 477
Query: 2424 ISTDRRPVPLEHFLYTGQDGKTQKDLFKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXX 2245
IST RPVPLEH+L+TG KTQ +LF ++D G F KGY A ++K + K
Sbjct: 478 ISTVTRPVPLEHYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFG 537
Query: 2244 XXXXXXXXXXXXXXXXXXXRNWPGKNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENA 2065
D+ +YL+L+ ++ QLP+VVF FSR RCDE A
Sbjct: 538 AKQPTHQGGPA--------------QDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQA 583
Query: 2064 QMLASMNLTTEVEKQHVRLFFSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPIL 1885
L S++LTT EK + LF +C+ RL+GSD++LPQVL M +L RG VHHSGILPIL
Sbjct: 584 SGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPIL 643
Query: 1884 KEVVELLFQKGYVKILFATETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGR 1705
KE+VE+LF +G VK+LFATETFAMGVNMPAR VVFDS+ KHDG+ R L PGEY QMAGR
Sbjct: 644 KEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGR 703
Query: 1704 AGRRGLDLTGTVIIICKDSTVPQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKI 1525
AGRRGLD TGTVI++CK VP+ L ++ G+ +L+S+FR+TY+MILNLLRV+ L++
Sbjct: 704 AGRRGLDPTGTVILLCK-GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRV 762
Query: 1524 EDMLQRSYVESDSLRESKEKRKSLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLR 1345
EDM++RS+ E S ++SK ++L + + + E L +Y+ + L
Sbjct: 763 EDMMKRSFSEFPSRKDSKAHEQALAELTKRLGALE--EPDMTGQLVDLPEYY-SWGEELT 819
Query: 1344 KSEHIWPKLNDENVIN-KLLCSGRFLIVNSAQQQLQNECVLLIKELNNKTLQILVASADA 1168
+++H+ + E+V K L +GR ++V + Q+ N ++++ +N T ++
Sbjct: 820 ETQHMIQRRIMESVNGLKSLSAGRVVVVKN--QEHHNALGVILQVSSNSTSRVFTTLVLC 877
Query: 1167 DETTNKNAAAIGFSKLPKSELSWLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSG 988
D+ +++ G + + + L+ F G C + + G
Sbjct: 878 DKPLSQDPQDRG------PATAEVPYPDDLVGFKLFLPEGP--CDHTVVKLQ------PG 923
Query: 987 IVAVMKKCAKGVQSGEILQEYNMTQIPRFRDRELSENVKKLLQQITTAVPGLKSGEIETY 808
+A + V +IL++++ Q P+F+ V +Q++ +G
Sbjct: 924 DMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLD 983
Query: 807 TWKELGSFCQNLDTSFDTDLL--EKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERK 634
+L Q D S L KLE L Q H RF + LR+R++I+++
Sbjct: 984 PVNDL----QLKDMSVVEGGLRARKLE---ELIQGAQCVHSPRFPAQYLKLRERMQIQKE 1036
Query: 633 IXXXXXXXXXXXXXXXXEYHNRLKVLEALNFVEQK-MVSLKGRIGCEIHHQELLITELIL 457
+ EYH R++VL L +V++ V L GR+ C + ELL+TEL+
Sbjct: 1037 MERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHELLLTELMF 1096
Query: 456 DYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRL--ESVASKH 283
D P E+AALLS L CQ Q G E V++V R+ VA +
Sbjct: 1097 DNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQG--IERVRAVAKRIGEVQVACRL 1154
Query: 282 KSQISDLGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAG 103
+ + E+ F L+EVVYEWA G PF ++ ++ EGL+V+CIQRL E+C+ +R A
Sbjct: 1155 NQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAA 1214
Query: 102 RIVGDPALVEKMEEVSASIRRDIVFAASLYT 10
R+VG+P L KME + +RRDI FAASLYT
Sbjct: 1215 RLVGEPVLGAKMETAATLLRRDIGFAASLYT 1245
>gi|42406362|gb|AAH65999.1| Skiv2l protein [Mus musculus]
Length = 1244
Score = 740 bits (1911), Expect = 0.0
Identities = 487/1264 (38%), Positives = 682/1264 (53%), Gaps = 22/1264 (1%)
Frame = -1
Query: 3735 LCNSAKIIFRQNP----------SAEFYNVADNLDSLLQPIDAPANIIAQVD---SNGKI 3595
LC A+ +F +P SA + + SLL ++ P Q + G I
Sbjct: 54 LCQEAEQLFLSSPAWLPLHGVEHSARKWQRKTDPWSLLAAVETPVPSDLQAQRHPTTGHI 113
Query: 3594 IGF----VENERIIVGSANTSMSINRAPYKQRSLHTTAGNSIKGSPGNVPFLPGFLEELD 3427
+G+ +EN + SA TS+S+ R P A S+ G+P PF PG ++E
Sbjct: 114 LGYKEVLLENTNL---SATTSLSLRRPP-------GPASQSLWGNPTQYPFWPGGMDE-- 161
Query: 3426 DLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTIGQIVLPNHSSVKKPAETPKSINIEE 3247
T T E + + F+ D LL P + V + + PA P +++
Sbjct: 162 ----PSITDLHTREEAEEEIDFEKD--LLTVPPGFKKGV--DFAPKDHPAPVPGLLSLSR 213
Query: 3246 MDMFDLLDMVTSNEYIIHTVAAPVKKSESIESEETPEDDKKVSXXXXXXXXXXXXPGNTE 3067
+ + LD+ +E P + S TP
Sbjct: 214 L--LEPLDLSGGDEDEGEAAGGPRGDNASPSPSGTP--------LVRASSLEDLVLKEAA 263
Query: 3066 KVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYKRLVPTMARKYPFSLDPFQQSSVLCME 2887
V+ P +E ++A + +++ D Y RL+P A ++ F D FQ+ ++L +E
Sbjct: 264 TVVSTPEPPKPPPQE--QWAVPVDVTSPVGDFY-RLIPQPAFQWAFEPDVFQKQAILHLE 320
Query: 2886 RGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGLV 2707
+ +S+FVAAHTSAGKTVVAEYAIAL Q H TR +YTSPIKALSNQKFRDF+ FGDVGL+
Sbjct: 321 QHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLL 380
Query: 2706 TGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVLIM 2527
TGD+QLHPEA+CLIMTTEILRSMLY+GS+VIRDLEWV+FDEVHYIN+ ERG VWEEVLIM
Sbjct: 381 TGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVLIM 440
Query: 2526 LPAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDRRPVPLEHFLYTGQDGKTQKDL 2347
LP HV I++LSATVPN +EFADW+GR+K R+I VIST RPVPLEH+L+TG KTQ +L
Sbjct: 441 LPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHYLFTGNSPKTQGEL 500
Query: 2346 FKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXXXXXXXXXXXXXXXXXXXXXRNWPGKN 2167
F ++D G F +GY A ++K + K
Sbjct: 501 FLLLDSRGAFHTQGYYAAVEAKKERMSKHAQTFGAKQPTHQGGPA--------------Q 546
Query: 2166 DKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFFSQCVQ 1987
D+ +YL+L+ ++ QLP+VVF FSR RCDE A L S++LTT EK + LF +C+
Sbjct: 547 DRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLA 606
Query: 1986 RLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAMGV 1807
RL+GSD++LPQVL M +L RG VHHSGILPILKE+VE+LF +G VK+LFATETFAMGV
Sbjct: 607 RLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGV 666
Query: 1806 NMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDSTVPQPDV 1627
NMPAR VVFDS+ KHDG+ R L PGEY QMAGRAGRRGLD TGTVI++CK VP+
Sbjct: 667 NMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK-GRVPEMAD 725
Query: 1626 LKNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEKRKSLVD 1447
L ++ G+ +L+S+FR+TY+MILNLLRV+ L++EDM++RS+ E S ++SK ++L D
Sbjct: 726 LHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAD 785
Query: 1446 TKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPKLNDENVINKLLCSGRFLI 1267
+ + E + L +Y+ I ++ + K L GR ++
Sbjct: 786 LTKRLGALE--EPDVTGQLADLPEYYSWAEELTETQNMIQRRIMESVNGLKSLSVGRVVV 843
Query: 1266 VNSAQQQLQNECVLLIKELNNKTLQILVASADADETTNKNAAAIGFSKLPKSELSWLTEE 1087
V + ++ N ++++ +N T ++ D+ + P +
Sbjct: 844 VKN--EEHHNALGVILQVSSNSTSRVFTTLVLCDKPVVSDNPRDKGPATPD-----VPHP 896
Query: 1086 NSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKGVQSGEILQEYNMTQIP 907
+ L+ F G C + + G VA + V +I ++++ Q P
Sbjct: 897 DDLIGFKLFLPEGP--CEHTVAKLQ------PGDVAAISTKVLRVNGEKISEDFSKRQQP 948
Query: 906 RFRDRELSENVKKLLQQITTAVPGLKSGEIETYTWKELGSFCQNLDTSFDTDLL--EKLE 733
+FR V +Q++ +G +L Q D + L KLE
Sbjct: 949 KFRKDPPLAAVTTAVQELLRLAQSYPAGPPTLDPINDL----QLKDVAVVEGGLRARKLE 1004
Query: 732 YNLNLPQSFPARHCTRFDEHFSVLRDRIRIERKIXXXXXXXXXXXXXXXXEYHNRLKVLE 553
L + H RF + LR+R++I++++ EYH R++VL
Sbjct: 1005 ---ELIRGAQCVHSPRFPAQYVKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLR 1061
Query: 552 ALNFVEQK-MVSLKGRIGCEIHHQELLITELILDYKFHQRSPAELAALLSTLTCQYNSGR 376
L +V++ V L GR+ C + ELL+TEL+ D P E+AALLS L CQ
Sbjct: 1062 TLGYVDEAGTVKLAGRVACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDP 1121
Query: 375 EMQFGGDTVFGEISESVKSVLTRL--ESVASKHKSQISDLGCEIRFDLMEVVYEWANGTP 202
Q G E VK+V R+ VA + + E+ F L+EVVYEWA G P
Sbjct: 1122 GDQLPSTLKQG--VERVKAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMP 1179
Query: 201 FYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSASIRRDIVFAA 22
F ++ ++ EGL+V+CIQRL E+C+ +R A R+VG+P L KME + +RRDIVFAA
Sbjct: 1180 FSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAA 1239
Query: 21 SLYT 10
SLYT
Sbjct: 1240 SLYT 1243
>gi|47087109|ref|NP_998724.1| superkiller viralicidic activity 2-like
[Rattus norvegicus]
gi|46237592|emb|CAE83970.1| superkiller viralicidic activity 2-like
(S. cerevisiae) [Rattus norvegicus]
Length = 1241
Score = 738 bits (1905), Expect = 0.0
Identities = 488/1267 (38%), Positives = 681/1267 (53%), Gaps = 25/1267 (1%)
Frame = -1
Query: 3735 LCNSAKIIFRQNP----------SAEFYNVADNLDSLLQPIDAPANIIAQVD---SNGKI 3595
LC A+ +F +P SA + + SLL + P Q + G I
Sbjct: 54 LCQEAEQLFLSSPAWLPLHGVEHSARKWQRKTDPWSLLAALGTPVPSDLQAQRHPTTGHI 113
Query: 3594 IGF----VENERIIVGSANTSMSINRAPYKQRSLHTTAGNSIKGSPGNVPFLPGFLEELD 3427
+G+ +EN + SA TS+S+ R P A S+ G+P PF PG ++E
Sbjct: 114 LGYKEVLLENTNL---SATTSLSLRRPP-------GPASQSLWGNPTQYPFWPGGMDE-- 161
Query: 3426 DLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTIGQIVLPNHSSVKKPAETPKSINIEE 3247
T ST E + + F+ D LL P + V A P +++
Sbjct: 162 ----PSITDLSTREEAEEEIDFEKD--LLTVPPGFKKGV-----DFAPKAPVPGLLSLSR 210
Query: 3246 MDMFDLLDMVTSNEYIIHTVAAPVKKSESIESEETPEDDKKVSXXXXXXXXXXXXPGNTE 3067
+ + LD+ +E P + S TP
Sbjct: 211 L--LEPLDLSGGDEGEGEAAGGPRGDAASASPSSTP--------LIRASSLEDLVLKEAS 260
Query: 3066 KVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYKRLVPTMARKYPFSLDPFQQSSVLCME 2887
V+ P +E ++A + +++ D Y RL+P A ++ F D FQ+ ++L +E
Sbjct: 261 TVVSTLEPLKPPPQE--QWAVPVDVTSPVGDFY-RLIPQPAFQWAFEPDVFQKQAILHLE 317
Query: 2886 RGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGLV 2707
+ +S+FVAAHTSAGKTVVAEYAIAL Q H TR +YTSPIKALSNQKFRDF+ FGDVGL+
Sbjct: 318 QHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLL 377
Query: 2706 TGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVLIM 2527
TGD+QLHPEA+CLIMTTEILRSMLY+GS+VIRDLEWV+FDEVHYIN+ ERG VWEEVLIM
Sbjct: 378 TGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVLIM 437
Query: 2526 LPAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDRRPVPLEHFLYTGQDGKTQKDL 2347
LP HV I++LSATVPN +EFADW+GR+K R+I VIST RPVPLEH+L+TG KTQ +L
Sbjct: 438 LPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHYLFTGNSPKTQGEL 497
Query: 2346 FKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXXXXXXXXXXXXXXXXXXXXXRNWPGKN 2167
F ++D G F KGY A ++K + K
Sbjct: 498 FLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQPTHQGGPA--------------Q 543
Query: 2166 DKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFFSQCVQ 1987
D+ +YL L+ ++ QLP+VVF FSR RCDE A L S++LTT EK + LF +C+
Sbjct: 544 DRGVYLALLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLA 603
Query: 1986 RLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAMGV 1807
RL+GSD++LPQVL M +L RG VHHSGILPILKE+VE+LF +G VK+LFATETFAMGV
Sbjct: 604 RLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGV 663
Query: 1806 NMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDSTVPQPDV 1627
NMPAR VVFDS+ KHDG+ R L PGEY QMAGRAGRRGLD TGTVI++CK VP+
Sbjct: 664 NMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK-GRVPEMAD 722
Query: 1626 LKNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEKRKSLVD 1447
L ++ G+ +L+S+FR+TY+MILNLLRV+ L++EDM++RS+ E S ++SK ++L D
Sbjct: 723 LHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAD 782
Query: 1446 TKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPKLNDENVINKLLCSGRFLI 1267
+ + E + L +Y+ I ++ + K L GR ++
Sbjct: 783 LTKRLGALE--EPDVTGQLADLPEYYSWAEELTETRNMIQRRIMESVNGLKSLSVGRVVV 840
Query: 1266 VNSAQQQLQNECVLLIKELNNKTLQILVASADADETTNKNAAAIGFSKLPKSE---LSWL 1096
V + ++ N ++++ +N T ++ D+ S+ P+ + +
Sbjct: 841 VKN--EEHHNALGVILQVSSNSTSRVFTTLVLCDKP--------AVSENPRDKGPATPDV 890
Query: 1095 TEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKGVQSGEILQEYNMT 916
+ L+ F G C + + G VA + V +I ++++
Sbjct: 891 PHPDDLVGFKLFLPEGP--CEHTVAKLQ------PGDVAAISTKVLRVNGEKISEDFSKR 942
Query: 915 QIPRFRDRELSENVKKLLQQITTAVPGLKSGEIETYTWKELGSFCQNLDTSFDTDLL--E 742
Q P+FR V +Q++ +G +L Q D + L
Sbjct: 943 QQPKFRKDPPLAAVTTAVQELLRLAQAYPAGPPTLDPINDL----QLKDVAVVEGGLRAR 998
Query: 741 KLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERKIXXXXXXXXXXXXXXXXEYHNRLK 562
KLE L + H RF + L++R++I++++ EYH R++
Sbjct: 999 KLE---ELIRGAQCVHSPRFPAQYVKLQERMQIQKEMERLRFLLSDQSLLLLPEYHQRVE 1055
Query: 561 VLEALNFVEQK-MVSLKGRIGCEIHHQELLITELILDYKFHQRSPAELAALLSTLTCQYN 385
VL L +V++ V L GR+ C + ELL+TEL+ D P E+AALLS L CQ
Sbjct: 1056 VLRTLGYVDEAGTVKLAGRVACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSP 1115
Query: 384 SGREMQFGGDTVFGEISESVKSVLTRL--ESVASKHKSQISDLGCEIRFDLMEVVYEWAN 211
Q G E VK+V R+ VA + + E+ F L+EVVYEWA
Sbjct: 1116 GDPGDQLPSTLKQG--VERVKAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWAR 1173
Query: 210 GTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSASIRRDIV 31
G PF ++ ++ EGL+V+CIQRL E+C+ +R A R+VG+P L KME + +RRDIV
Sbjct: 1174 GMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIV 1233
Query: 30 FAASLYT 10
FAASLYT
Sbjct: 1234 FAASLYT 1240
>gi|26325700|dbj|BAC26604.1| unnamed protein product [Mus musculus]
Length = 1244
Score = 738 bits (1905), Expect = 0.0
Identities = 486/1264 (38%), Positives = 681/1264 (53%), Gaps = 22/1264 (1%)
Frame = -1
Query: 3735 LCNSAKIIFRQNP----------SAEFYNVADNLDSLLQPIDAPANIIAQVD---SNGKI 3595
LC A+ +F +P SA + + SLL ++ P Q + G I
Sbjct: 54 LCQEAEQLFLSSPAWLPLHGVEHSARKWQRKTDPWSLLAAVETPVPSDLQAQRHPTTGHI 113
Query: 3594 IGF----VENERIIVGSANTSMSINRAPYKQRSLHTTAGNSIKGSPGNVPFLPGFLEELD 3427
+G+ +EN + SA TS+S+ R P A S+ G+P PF PG ++E
Sbjct: 114 LGYKEVLLENTNL---SATTSLSLRRPP-------GPASQSLWGNPTQYPFWPGGMDE-- 161
Query: 3426 DLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTIGQIVLPNHSSVKKPAETPKSINIEE 3247
T T E + + F+ D LL P + V + + PA P +++
Sbjct: 162 ----PSITDLHTREEAEEEIDFEKD--LLTVPPGFKKGV--DFAPKDHPAPVPGLLSLSR 213
Query: 3246 MDMFDLLDMVTSNEYIIHTVAAPVKKSESIESEETPEDDKKVSXXXXXXXXXXXXPGNTE 3067
+ + LD+ +E P + S TP
Sbjct: 214 L--LEPLDLSGGDEDEGEAAGGPRGDNASPSPSGTP--------LVRASSLEDLVLKEAA 263
Query: 3066 KVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYKRLVPTMARKYPFSLDPFQQSSVLCME 2887
V+ P +E ++A + +++ D Y RL+P A ++ F D FQ+ ++L +E
Sbjct: 264 TVVSTPEPPKPPPQE--QWAVPVDVTSPVGDFY-RLIPQPAFQWAFEPDVFQKQAILHLE 320
Query: 2886 RGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGLV 2707
+ +S+FVAAHTSAGKTVVAEYAIAL Q H TR +YTSPIKALSNQKFRDF+ FGDVGL+
Sbjct: 321 QHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLL 380
Query: 2706 TGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVLIM 2527
TGD+QLHPEA+CLIMTTEILRSMLY+GS+VIRDLEWV+FDEVHYIN+ ERG VWEEVLIM
Sbjct: 381 TGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVLIM 440
Query: 2526 LPAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDRRPVPLEHFLYTGQDGKTQKDL 2347
LP HV I++LSATVPN +EFADW+GR+K R+I VIST RPVPLEH+L+TG KTQ +L
Sbjct: 441 LPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHYLFTGNSPKTQGEL 500
Query: 2346 FKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXXXXXXXXXXXXXXXXXXXXXRNWPGKN 2167
F ++D G F +GY A ++K + K
Sbjct: 501 FLLLDSRGAFHTQGYYAAVEAKKERMSKHAQTFGAKQPTHQGGPA--------------Q 546
Query: 2166 DKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFFSQCVQ 1987
D+ +YL+L+ ++ QLP+VVF FSR RCDE A L S++LTT EK + LF +C+
Sbjct: 547 DRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLA 606
Query: 1986 RLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAMGV 1807
RL+GSD++LPQVL M +L RG VHHSGILPILKE+VE+LF +G VK+LFATETFAMGV
Sbjct: 607 RLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGV 666
Query: 1806 NMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDSTVPQPDV 1627
NMPAR VVFDS+ KHDG+ R L PGEY QMAGRAGRRGLD TGTVI++CK VP+
Sbjct: 667 NMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK-GRVPEMAD 725
Query: 1626 LKNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEKRKSLVD 1447
L ++ G+ +L+S+FR+TY+MILNLLRV+ L++EDM++RS+ E S ++SK ++L D
Sbjct: 726 LHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAD 785
Query: 1446 TKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPKLNDENVINKLLCSGRFLI 1267
+ + E + L +Y+ I ++ + K L GR ++
Sbjct: 786 LTKRLGALE--EPDVTGQLADLPEYYSWAEELTETQNMIQRRIMESVNGLKSLSVGRVVV 843
Query: 1266 VNSAQQQLQNECVLLIKELNNKTLQILVASADADETTNKNAAAIGFSKLPKSELSWLTEE 1087
V + ++ N ++++ +N T ++ D+ + P +
Sbjct: 844 VKN--EEHHNAMGVILQVSSNSTSRVFTTLVLCDKPVVSDNPRDKGPATPD-----VPHP 896
Query: 1086 NSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKGVQSGEILQEYNMTQIP 907
+ L+ F G C + + G VA + V +I ++++ Q P
Sbjct: 897 DDLIGFKLFLPEGP--CEHTVAKLQ------PGDVAAISTKVLRVNGEKISEDFSKRQQP 948
Query: 906 RFRDRELSENVKKLLQQITTAVPGLKSGEIETYTWKELGSFCQNLDTSFDTDLL--EKLE 733
+FR V +Q++ +G +L Q D + L KLE
Sbjct: 949 KFRKDPPLAAVTTAVQELLRLAQSYPAGPPTLDPINDL----QLKDVAVVEGGLRARKLE 1004
Query: 732 YNLNLPQSFPARHCTRFDEHFSVLRDRIRIERKIXXXXXXXXXXXXXXXXEYHNRLKVLE 553
L + H RF + LR+R++I++++ EYH R++VL
Sbjct: 1005 ---ELIRGAQCVHSPRFPAQYVKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLR 1061
Query: 552 ALNFVEQK-MVSLKGRIGCEIHHQELLITELILDYKFHQRSPAELAALLSTLTCQYNSGR 376
L +V++ V L GR+ C + ELL+TEL+ D P E+AALLS L CQ
Sbjct: 1062 TLGYVDEAGTVKLAGRVACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDP 1121
Query: 375 EMQFGGDTVFGEISESVKSVLTRL--ESVASKHKSQISDLGCEIRFDLMEVVYEWANGTP 202
Q G E VK+V R+ VA + + E+ L+EVVYEWA G P
Sbjct: 1122 GDQLPSTLKQG--VERVKAVAKRIGEVQVACGLNQTVEEFVGELNLGLVEVVYEWARGMP 1179
Query: 201 FYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSASIRRDIVFAA 22
F ++ ++ EGL+V+CIQRL E+C+ +R A R+VG+P L KME + +RRDIVFAA
Sbjct: 1180 FSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAA 1239
Query: 21 SLYT 10
SLYT
Sbjct: 1240 SLYT 1243
>gi|10946650|ref|NP_067312.1| superkiller viralicidic activity 2-like
[Mus musculus]
gi|2944423|gb|AAC05282.1| hypothetical protein [Mus musculus]
Length = 1236
Score = 736 bits (1901), Expect = 0.0
Identities = 486/1264 (38%), Positives = 679/1264 (53%), Gaps = 22/1264 (1%)
Frame = -1
Query: 3735 LCNSAKIIFRQNP----------SAEFYNVADNLDSLLQPIDAPANIIAQVD---SNGKI 3595
LC A+ +F +P SA + + SLL ++ P Q + G I
Sbjct: 49 LCQEAEQLFLSSPAWLPLHGVEHSARKWQRKTDPWSLLAAVETPVPSDLQAQRHPTTGHI 108
Query: 3594 IGF----VENERIIVGSANTSMSINRAPYKQRSLHTTAGNSIKGSPGNVPFLPGFLEELD 3427
+G+ +EN + SA TS+S+ R P A S+ G+P PF PG ++E
Sbjct: 109 LGYKEVLLENTNL---SATTSLSLRRPP-------GPASQSLWGNPTQYPFWPGGMDE-- 156
Query: 3426 DLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTIGQIVLPNHSSVKKPAETPKSINIEE 3247
T T E + + F+ D LL P + V A P +++
Sbjct: 157 ----PSITDLHTREEAEEEIDFEKD--LLTVPPGFKKGV-----DFAPKAPVPGLLSLSR 205
Query: 3246 MDMFDLLDMVTSNEYIIHTVAAPVKKSESIESEETPEDDKKVSXXXXXXXXXXXXPGNTE 3067
+ + LD+ +E P + S TP
Sbjct: 206 L--LEPLDLSGGDEDEGEAAGGPRGDNASPSPSGTP--------LVRASSLEDLVLKEAA 255
Query: 3066 KVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYKRLVPTMARKYPFSLDPFQQSSVLCME 2887
V+ P +E ++A + +++ D Y RL+P A ++ F D FQ+ ++L +E
Sbjct: 256 TVVSTPEPPKPPPQE--QWAVPVDVTSPVGDFY-RLIPQPAFQWAFEPDVFQKQAILHLE 312
Query: 2886 RGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGLV 2707
+ +S+FVAAHTSAGKTVVAEYAIAL Q H TR +YTSPIKALSNQKFRDF+ FGDVGL+
Sbjct: 313 QHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLL 372
Query: 2706 TGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVLIM 2527
TGD+QLHPEA+CLIMTTEILRSMLY+GS+VIRDLEWV+FDEVHYIN+ ERG VWEEVLIM
Sbjct: 373 TGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVLIM 432
Query: 2526 LPAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDRRPVPLEHFLYTGQDGKTQKDL 2347
LP HV I++LSATVPN +EFADW+GR+K R+I VIST RPVPLEH+L+TG KTQ +L
Sbjct: 433 LPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHYLFTGNSPKTQGEL 492
Query: 2346 FKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXXXXXXXXXXXXXXXXXXXXXRNWPGKN 2167
F ++D G F +GY A ++K + K
Sbjct: 493 FLLLDSRGAFHTQGYYAAVEAKKERMSKHAQTFGAKQPTHQGGPA--------------Q 538
Query: 2166 DKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFFSQCVQ 1987
D+ +YL+L+ ++ QLP+VVF FSR RCDE A L S++LTT EK + LF +C+
Sbjct: 539 DRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLA 598
Query: 1986 RLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAMGV 1807
RL+GSD++LPQVL M +L RG VHHSGILPILKE+VE+LF +G VK+LFATETFAMGV
Sbjct: 599 RLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGV 658
Query: 1806 NMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDSTVPQPDV 1627
NMPAR VVFDS+ KHDG+ R L PGEY QMAGRAGRRGLD TGTVI++CK VP+
Sbjct: 659 NMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK-GRVPEMAD 717
Query: 1626 LKNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEKRKSLVD 1447
L ++ G+ +L+S+FR+TY+MILNLLRV+ L++EDM++RS+ E S ++SK ++L D
Sbjct: 718 LHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAD 777
Query: 1446 TKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPKLNDENVINKLLCSGRFLI 1267
+ + E + L +Y+ I ++ + K L GR ++
Sbjct: 778 LTKRLGALE--EPDVTGQLADLPEYYSWAEELTETQNMIQRRIMESVNGLKSLSVGRVVV 835
Query: 1266 VNSAQQQLQNECVLLIKELNNKTLQILVASADADETTNKNAAAIGFSKLPKSELSWLTEE 1087
V + ++ N ++++ +N T ++ D+ + P +
Sbjct: 836 VKN--EEHHNALGVILQVSSNSTSRVFTTLVLCDKPVVSDNPRDKGPATPD-----VPHP 888
Query: 1086 NSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKGVQSGEILQEYNMTQIP 907
+ L+ F G C + + G VA + V +I ++++ Q P
Sbjct: 889 DDLIGFKLFLPEGP--CEHTVAKLQ------PGDVAAISTKVLRVNGEKISEDFSKRQQP 940
Query: 906 RFRDRELSENVKKLLQQITTAVPGLKSGEIETYTWKELGSFCQNLDTSFDTDLL--EKLE 733
+FR V +Q++ +G +L Q D + L KLE
Sbjct: 941 KFRKDPPLAAVTTAVQELLRLAQSYPAGPPTLDPINDL----QLKDVAVVEGGLRARKLE 996
Query: 732 YNLNLPQSFPARHCTRFDEHFSVLRDRIRIERKIXXXXXXXXXXXXXXXXEYHNRLKVLE 553
L + H RF + LR+R++I++++ EYH R++VL
Sbjct: 997 ---ELIRGAQCVHSPRFPAQYVKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLR 1053
Query: 552 ALNFVEQK-MVSLKGRIGCEIHHQELLITELILDYKFHQRSPAELAALLSTLTCQYNSGR 376
L +V++ V L GR+ C + ELL+TEL+ D P E+AALLS L CQ
Sbjct: 1054 TLGYVDEAGTVKLAGRVACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDP 1113
Query: 375 EMQFGGDTVFGEISESVKSVLTRL--ESVASKHKSQISDLGCEIRFDLMEVVYEWANGTP 202
Q G E VK+V R+ VA + + E+ F L+EVVYEWA G P
Sbjct: 1114 GDQLPSTLKQG--VERVKAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMP 1171
Query: 201 FYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSASIRRDIVFAA 22
F ++ ++ EGL+V+CIQRL E+C+ +R A R+VG+P L KME + +RRDIVFAA
Sbjct: 1172 FSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAA 1231
Query: 21 SLYT 10
SLYT
Sbjct: 1232 SLYT 1235
>gi|17933658|ref|NP_524465.1| CG10210-PA [Drosophila melanogaster]
gi|16769288|gb|AAL28863.1| LD23303p [Drosophila melanogaster]
gi|23172083|gb|AAF56187.2| CG10210-PA [Drosophila melanogaster]
Length = 1197
Score = 706 bits (1821), Expect = 0.0
Identities = 456/1214 (37%), Positives = 673/1214 (54%), Gaps = 13/1214 (1%)
Frame = -1
Query: 3612 DSNGKIIGFVENERIIVGS-ANTSMSINRAPYKQRSLHTTAGNSIKGSPGNVPFLPGFLE 3436
D +G I+ FVE + VG+ AN SMS+ R P ++ +GS N PF PG +
Sbjct: 58 DQSGHILEFVELDLEAVGANANNSMSMQREP-------GLLEDATRGSHSNFPFWPGGFD 110
Query: 3435 ELDDLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTIGQIVLPNHSSVKKPAETPKSIN 3256
E +A + G+ K L+ + + LP V P+ N
Sbjct: 111 EQRQQIAALDVSNFQFGD--KLLTVPPGFSSGYDFFQSQSVTLP--PVVADPSNVDLLEN 166
Query: 3255 IEE-MDMFDLLDMVTSNEYI-IHTVAAPVKKSESIESEETPEDDKKVSXXXXXXXXXXXX 3082
+E+ +D+ + + + S E T +P + + + SEE + D +
Sbjct: 167 LEQDLDVQEWMKLTRSEETSSTGTPKSPKQSNVQLPSEEFRDVDDHIMKA---------- 216
Query: 3081 PGNTEKVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYKRLVPTMARKYPFSLDPFQQSS 2902
+ + V+ I +T K ++A+ + +S + +K +P A +PF LD FQ+ +
Sbjct: 217 --DLKPVLNI---STTTKNFKSDWAEMVDIS-QPINNFKEQIPCPAMDFPFELDVFQKQA 270
Query: 2901 VLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFG 2722
+L +E+ + +FVAAHTSAGKTVVAEYAIAL + TR +YTSPIKALSNQK+RDF++ F
Sbjct: 271 ILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIKALSNQKYRDFRKTFK 330
Query: 2721 DVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWE 2542
DVGL+TGD+Q+ P A+CLIMTTEILRSMLY GS+V RDLEWV+FDEVHYINN ERGHVWE
Sbjct: 331 DVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDVTRDLEWVIFDEVHYINNPERGHVWE 390
Query: 2541 EVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDRRPVPLEHFLYTGQDGK 2362
EV+I+LP HV I+MLSATVPN +E ADWVG K RK+ VIST +RPVPL HFLYTG GK
Sbjct: 391 EVIILLPEHVNIIMLSATVPNTLELADWVGSTKKRKVYVISTLKRPVPLTHFLYTGAGGK 450
Query: 2361 TQKDLFKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXXXXXXXXXXXXXXXXXXXXXRN 2182
++ D+F ++D G+++ Y A + K ++ K K +
Sbjct: 451 SRDDIFLLVDAQGKYLQGNYEKAVERKKEMQGKAKG----------------GGGGPRNH 494
Query: 2181 WPGKNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFF 2002
K ++ ++ LI++++ S+ +P+V F SR RCD N L S++L TE EK V+ FF
Sbjct: 495 LNAKQEQYTWIGLIDFLRRSNMMPVVAFTLSRNRCDSNLAALQSVDLNTEKEKGAVQKFF 554
Query: 2001 SQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATET 1822
QC+ +LK D+ +PQVL ++D RG VHHSGILPILKE+VE+LFQ G VK+LFATET
Sbjct: 555 LQCLAKLKPPDRTIPQVLVLKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFATET 614
Query: 1821 FAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDSTV 1642
FAMGVNMPAR VVFDS K DG E R L PGEY QMAGRAGRRG D TGT II+CK S
Sbjct: 615 FAMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGSVP 674
Query: 1641 PQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEKR 1462
P + L+ +I G +L+S+F + Y++IL LR+E +K+ED+++ S+ E + + ++
Sbjct: 675 PSME-LRPMILGLPEKLQSQFILRYAVILTCLRIESIKVEDIMKFSFKEFNLKLQLPTQQ 733
Query: 1461 KSLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPKLNDENVINKLLCS 1282
K L ++ + T+ L +++D + ++ I + + I K L +
Sbjct: 734 KQLRLAEDKFAMLPTLG----EHLQPLVNFYDKAVEYWKEKHRIMKFVVTQPKIQKELKA 789
Query: 1281 GRFLIVNSAQQQLQNECVLLIKELNNKTLQILVASADADETTNKNAAAIGFSKLPKSELS 1102
GR +++ + + +L K + K V D A + L + EL
Sbjct: 790 GRVIVITQGKHYNKLAILLNTKSVPGKDTIYKVLVLD------HQFKAKDSNSLQQGELY 843
Query: 1101 WLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKGVQSGEILQEYN 922
+ +LS + R I + +I I+++ K K V + I++ +
Sbjct: 844 Y-----KILSLT---PRNMTFQPVGIGGHTVLDIKAIDIISITKSTLK-VDADAIIRNWE 894
Query: 921 MTQIPRFRDRELSENVKKLLQQITTAVPGLKSGEIETYTWKELGSFCQNLDTSFDTD--L 748
Q+ RF+D S +V K + ++ L I+ + + + + + D++ +
Sbjct: 895 QRQLERFKDSPPSGSVVKAVTELNQ----LNESYIDNPDNIKYVNLSKEIIVNADSEVAM 950
Query: 747 LEKLEYNLNLPQSF-PARHCTRFDEHFSVLRDRIRIERKIXXXXXXXXXXXXXXXXEYHN 571
L +++ L F P + F++ F+ + +R +E I +Y N
Sbjct: 951 LNYVDHLLRKVGEFLPHTNIAGFEQEFAKVYERRMLEIHIEELRFKNSARNLTLYPDYCN 1010
Query: 570 RLKVLEALNFVEQ-KMVSLKGRIGCEIHHQELLITELILDYKFHQRSPAELAALLSTLTC 394
+LKVL AL ++++ V+LKG++ CE+ ELLITELIL F+ PAE+AALLS L
Sbjct: 1011 KLKVLRALKYIDELDEVTLKGKVACEMGQNELLITELILCNMFNDLEPAEIAALLSGLVF 1070
Query: 393 QYNSGREMQFGGDTVFGEISESVKSVLTRLESV-----ASKHKSQIS-DLGCEIRFDLME 232
Q + I E++K + E + A + + Q + + + F L+E
Sbjct: 1071 QAKMQDK---------PVIPEALKECVAAFEQINDTILAEEQRFQAAIETDNRLNFGLLE 1121
Query: 231 VVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSA 52
VVYEWA PF +IM++T QEG+IV+CIQ+L+E +DV+ A +G+P L KMEE SA
Sbjct: 1122 VVYEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETLRDVKTAAIRIGNPGLQSKMEEASA 1181
Query: 51 SIRRDIVFAASLYT 10
+I+RDIVF ASLYT
Sbjct: 1182 AIKRDIVFTASLYT 1195
>gi|13446608|emb|CAC35050.1| putative helicase Ski2 [Drosophila
melanogaster]
Length = 1197
Score = 706 bits (1821), Expect = 0.0
Identities = 456/1214 (37%), Positives = 673/1214 (54%), Gaps = 13/1214 (1%)
Frame = -1
Query: 3612 DSNGKIIGFVENERIIVGS-ANTSMSINRAPYKQRSLHTTAGNSIKGSPGNVPFLPGFLE 3436
D +G I+ FVE + VG+ AN SMS+ R P ++ +GS N PF PG +
Sbjct: 58 DQSGHILEFVELDLEAVGANANNSMSMQREP-------GLLEDATRGSHSNFPFWPGGFD 110
Query: 3435 ELDDLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTIGQIVLPNHSSVKKPAETPKSIN 3256
E +A + G+ K L+ + + LP V P+ N
Sbjct: 111 EQRQQIAALDVSNFQFGD--KLLTVPPGFSSGYDFFQSQSVTLP--PVVADPSNVDLLEN 166
Query: 3255 IEE-MDMFDLLDMVTSNEYI-IHTVAAPVKKSESIESEETPEDDKKVSXXXXXXXXXXXX 3082
+E+ +D+ + + + S E T +P + + + SEE + D +
Sbjct: 167 LEQDLDVQEWMKLTRSEETSSTGTPKSPKQSNVQLPSEEFRDVDDHIMKA---------- 216
Query: 3081 PGNTEKVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYKRLVPTMARKYPFSLDPFQQSS 2902
+ + V+ I +T K ++A+ + +S + +K +P A +PF LD FQ+ +
Sbjct: 217 --DLKPVLNI---STTTKNFKSDWAEMVDIS-QPINNFKEQIPCPAMDFPFELDVFQKQA 270
Query: 2901 VLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFG 2722
+L +E+ + +FVAAHTSAGKTVVAEYAIAL + TR +YTSPIKALSNQK+RDF++ F
Sbjct: 271 ILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIKALSNQKYRDFRKTFK 330
Query: 2721 DVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWE 2542
DVGL+TGD+Q+ P A+CLIMTTEILRSMLY GS+V RDLEWV+FDEVHYINN ERGHVWE
Sbjct: 331 DVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDVTRDLEWVIFDEVHYINNPERGHVWE 390
Query: 2541 EVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDRRPVPLEHFLYTGQDGK 2362
EV+I+LP HV I+MLSATVPN +E ADWVG K RK+ VIST +RPVPL HFLYTG GK
Sbjct: 391 EVIILLPEHVNIIMLSATVPNTLELADWVGSTKKRKVYVISTLKRPVPLTHFLYTGAGGK 450
Query: 2361 TQKDLFKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXXXXXXXXXXXXXXXXXXXXXRN 2182
++ D+F ++D G+++ Y A + K ++ K K +
Sbjct: 451 SRDDIFLLVDAQGKYLQGNYEKAVERKKEMQGKAKG----------------GGGGPRNH 494
Query: 2181 WPGKNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFF 2002
K ++ ++ LI++++ S+ +P+V F SR RCD N L S++L TE EK V+ FF
Sbjct: 495 LNAKQEQYTWIGLIDFLRRSNMMPVVAFTLSRNRCDSNLAALQSVDLNTEKEKGAVQKFF 554
Query: 2001 SQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATET 1822
QC+ +LK D+ +PQVL ++D RG VHHSGILPILKE+VE+LFQ G VK+LFATET
Sbjct: 555 LQCLAKLKPPDRTIPQVLVLKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFATET 614
Query: 1821 FAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDSTV 1642
FAMGVNMPAR VVFDS K DG E R L PGEY QMAGRAGRRG D TGT II+CK S
Sbjct: 615 FAMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGSVP 674
Query: 1641 PQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEKR 1462
P + L+ +I G +L+S+F + Y++IL LR+E +K+ED+++ S+ E + + ++
Sbjct: 675 PSME-LRPMILGLPEKLQSQFILRYAVILTCLRIESIKVEDIMKFSFKEFNLKLQLPTQQ 733
Query: 1461 KSLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPKLNDENVINKLLCS 1282
K L ++ + T+ L +++D + ++ I + + I K L +
Sbjct: 734 KQLRLAEDKFAMLPTLG----EHLQPLVNFYDKAVEYWKEKHRIMKFVVTQPKIQKELKA 789
Query: 1281 GRFLIVNSAQQQLQNECVLLIKELNNKTLQILVASADADETTNKNAAAIGFSKLPKSELS 1102
GR +++ + + +L K + K V D A + L + EL
Sbjct: 790 GRVIVITQGKHYNKLAILLNTKSVPGKDTIYKVLVLD------HQFKAKDSNSLQQGELY 843
Query: 1101 WLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKGVQSGEILQEYN 922
+ +LS + R I + +I I+++ K K V + I++ +
Sbjct: 844 Y-----KILSLT---PRNMTFQPVGIGGHTVLDIKAIDIISITKSTLK-VDADAIIRNWE 894
Query: 921 MTQIPRFRDRELSENVKKLLQQITTAVPGLKSGEIETYTWKELGSFCQNLDTSFDTD--L 748
Q+ RF+D S +V K + ++ L I+ + + + + + D++ +
Sbjct: 895 QRQLERFKDSPPSGSVVKAVTELNQ----LNESYIDNPDNIKYVNLSKEIIVNADSEVAM 950
Query: 747 LEKLEYNLNLPQSF-PARHCTRFDEHFSVLRDRIRIERKIXXXXXXXXXXXXXXXXEYHN 571
L +++ L F P + F++ F+ + +R +E I +Y N
Sbjct: 951 LNYVDHLLRKVGEFLPHTNIAGFEQEFAKVYERRMLEIHIEELRFKNSARNLTLYPDYCN 1010
Query: 570 RLKVLEALNFVEQ-KMVSLKGRIGCEIHHQELLITELILDYKFHQRSPAELAALLSTLTC 394
+LKVL AL ++++ V+LKG++ CE+ ELLITELIL F+ PAE+AALLS L
Sbjct: 1011 KLKVLRALKYIDELDEVTLKGKVACEMGQNELLITELILCNMFNDLEPAEIAALLSGLVF 1070
Query: 393 QYNSGREMQFGGDTVFGEISESVKSVLTRLESV-----ASKHKSQIS-DLGCEIRFDLME 232
Q + I E++K + E + A + + Q + + + F L+E
Sbjct: 1071 QAKMQDK---------PVIPEALKECVAAFEQINDTILAEEQRFQAAIETDNRLNFGLLE 1121
Query: 231 VVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSA 52
VVYEWA PF +IM++T QEG+IV+CIQ+L+E +DV+ A +G+P L KMEE SA
Sbjct: 1122 VVYEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETVRDVKTAAIRIGNPGLQSKMEEASA 1181
Query: 51 SIRRDIVFAASLYT 10
+I+RDIVF ASLYT
Sbjct: 1182 AIKRDIVFTASLYT 1195
>gi|46111799|ref|XP_382957.1| hypothetical protein FG02781.1
[Gibberella zeae PH-1]
gi|42547933|gb|EAA70776.1| hypothetical protein FG02781.1 [Gibberella
zeae PH-1]
Length = 1271
Score = 667 bits (1721), Expect = 0.0
Identities = 451/1293 (34%), Positives = 660/1293 (50%), Gaps = 96/1293 (7%)
Frame = -1
Query: 3603 GKIIGFVENERIIVGSANT--SMSINRAPYKQRSLHTTAGNSIKGSPGNVPFLPGFLEEL 3430
G++ G+ +N + SA S S++R P + ++G+ G PF PG LE +
Sbjct: 85 GRVTGY-KNVTVPANSATAKNSTSLSRKPANRADF-------VRGAAGFFPFAPGGLEGI 136
Query: 3429 DDLLAGETTAK--------STSGEESKFLSFKDDATLLNTIPTIGQIVLPNHSSVKKPAE 3274
+ A E + S + + + + LL P + + +
Sbjct: 137 EATAAFEDSVHTGGIVEPGSAGNKLERVIQLGAEGGLLEIAPGMSRGI----------DF 186
Query: 3273 TPKSINIEEMDMFDLLDMVTSNEYIIHTVAAPVKKSESIESEETPEDDKKVSXXXXXXXX 3094
K N+ + D + +++ + E E++ P+ D +VS
Sbjct: 187 AKKKTNVSQEDANAIKEVL---------------EEEPEEAKIGPKGDDEVSPDTVTPEP 231
Query: 3093 XXXXPGNTEKVIEIFG------------AATEPTKEKFEFAQRLVLSADEEDEYKRLVPT 2950
+ + + +I AA+ K E+A + ++ D + ++ LVP
Sbjct: 232 NADSGEDGDDIDDILPVEFPALEPHGVLAASSARKAGREWAHMVDINHDMSN-FRELVPD 290
Query: 2949 MARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPI 2770
MAR++PF LD FQ+ +V +E G+S+FVAAHTSAGKTVVAEYAIAL H T+A+YTSPI
Sbjct: 291 MAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSPI 350
Query: 2769 KALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVF 2590
KALSNQKFRDF+Q F +VG++TGD+Q++PEA+CLIMTTEILRSMLY G+++IRD+E+V+F
Sbjct: 351 KALSNQKFRDFRQTFDEVGILTGDVQINPEASCLIMTTEILRSMLYRGADIIRDVEFVIF 410
Query: 2589 DEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDR 2410
DEVHY+N+ ERG VWEEV+IMLP HV +++LSATVPN EFA WVGR K + I VIST +
Sbjct: 411 DEVHYVNDFERGVVWEEVIIMLPEHVSLILLSATVPNTKEFASWVGRTKQKDIYVISTPK 470
Query: 2409 RPVPLEHFLYTGQDGKTQKDLFKIID----------RSGQFILKGYNDAKDSKAKIYEK- 2263
RPVPLEH+L+ G KD+ KI+D + F ++G + K ++ + +
Sbjct: 471 RPVPLEHYLWAG------KDIHKIVDSEKKFIEKGWKDAHFAIQGRDKQKPAETTVATRG 524
Query: 2262 ----------------EKAXXXXXXXXXXXXXXXXXXXXXXRNWPGK------------- 2170
++ + PG
Sbjct: 525 GNPRGNQRGGTQRGGPQRGGRGGGQQRGGNQQRGRGGPPRASHAPGHMGRGGRAGGFTSV 584
Query: 2169 -NDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFFSQC 1993
DKN++++L+ Y+K LP +FVFS+KRC+ENA L++ + T EK H+ + +
Sbjct: 585 AQDKNLWVHLVQYLKKQTLLPACIFVFSKKRCEENADALSNQDFCTASEKSHIHMIIEKS 644
Query: 1992 VQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAM 1813
V RLK D++LPQ++ +R+L RG AVHH G+LPI+KE+VE+LF + VK+LFATETFAM
Sbjct: 645 VARLKPDDRQLPQIIRLRELLSRGIAVHHGGLLPIVKELVEILFAQTLVKVLFATETFAM 704
Query: 1812 GVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDSTVPQP 1633
G+N+P R VVF KHDG R L PGEYTQMAGRAGRRGLD G+VII+ P
Sbjct: 705 GLNLPTRTVVFSGYRKHDGHSFRNLLPGEYTQMAGRAGRRGLDTVGSVIIVPPGGLDDAP 764
Query: 1632 DV--LKNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEKRK 1459
V L+N+I G+ +L S+FR+TY+MILNLLRVE LKIE+M++RS+ E + + E K
Sbjct: 765 PVADLRNMILGEPSKLRSQFRLTYNMILNLLRVEALKIEEMIKRSFSEHATQQLLPEHEK 824
Query: 1458 SLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPKLNDENVINKLLCSG 1279
+ + + + C C + + + H A F R + ++ L + ++
Sbjct: 825 DVKLAQADLAKVKRDSCEIC--DVSMDECHQASQDFKRLTFDLYKGLLAIPIGRRMFSQH 882
Query: 1278 RFLIVNSAQQQLQNECVLLIKELNNK------TLQILVASA--DADETTNKNAAAIGFSK 1123
R ++ N +++ +LL ++NK TL + + D + T++ F K
Sbjct: 883 RLVVFN--WDGIRSVGILLADGISNKGTSEDPTLHLCAIKSLRDRRDATDQLPFVPTFRK 940
Query: 1122 ----LPKSELSWLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKG 955
LPKS+ T + +PLS + + + KG
Sbjct: 941 YFHELPKSKKRVQT--------------------------KTLHVPLSDVECLTRWVTKG 974
Query: 954 V------------QSGEILQEYNMTQIPRFRDRELSENVKKLLQQITTAVPGLKSGEIET 811
+ Q+ + LQE + R + +LS + LQ+I GL
Sbjct: 975 IVPEIFQGGDGYHQAKDRLQELCGSWDDRLEELDLSRIKQLQLQEIVETRVGL------- 1027
Query: 810 YTWKELGSFCQNLDTSFDTDLLEKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERKI 631
+ T D+ PA C+ F +HF++ D I+ I
Sbjct: 1028 ------------IKTISDS----------------PAEKCSEFLKHFAMCHDEWLIKEHI 1059
Query: 630 XXXXXXXXXXXXXXXXEYHNRLKVLEALNFVEQ-KMVSLKGRIGCEIHH-QELLITELIL 457
+Y R++VL+ L F++ + LKG++ CE+H EL++TELIL
Sbjct: 1060 SQLKQSLSDQNLQLLPDYEQRVQVLKELGFIDDATRIQLKGKVACEVHSGDELVLTELIL 1119
Query: 456 DYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGE-----ISESVKSVLTRLESVA 292
D PAE+AALLS Q + E G+ G+ ISE V V TRL+ +
Sbjct: 1120 DNVLADYEPAEIAALLSAFVFQEKTDMEPSLTGNLERGKETIVSISEKVNDVQTRLQVIQ 1179
Query: 291 SKHKSQISDLGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVR 112
S S +D RF LMEVVYEWA G F I +TD EG IV+ I RLDE C++V+
Sbjct: 1180 SADDS--NDFVSRPRFGLMEVVYEWARGMSFKNITGLTDVLEGTIVRTITRLDETCREVK 1237
Query: 111 NAGRIVGDPALVEKMEEVSASIRRDIVFAASLY 13
NA RIVGDP L +KM++ I+RDI ASLY
Sbjct: 1238 NAARIVGDPELYQKMQQAQEMIKRDITAVASLY 1270
>gi|32417138|ref|XP_329047.1| hypothetical protein [Neurospora crassa]
gi|28927298|gb|EAA36252.1| hypothetical protein [Neurospora crassa]
Length = 1294
Score = 665 bits (1715), Expect = 0.0
Identities = 457/1248 (36%), Positives = 652/1248 (51%), Gaps = 66/1248 (5%)
Frame = -1
Query: 3558 SANTSMSINRAPYKQRSLHTTAGNSIKGSPGNVPFLPGFLEELDDLLAGETT----AKST 3391
+A TS S+ R P + ++G G PF PG L+ ++ A E A S
Sbjct: 127 TAKTSTSMMRKPASKSEF-------VRGGAGFFPFAPGGLDGIESAAALEDQLRKDAASD 179
Query: 3390 SGEESKFLS---FKDDATLLNTIPTIGQIVLPNHSSVKKPAETPKSINIEEMDMFDLLDM 3220
GE K L + LL P + + + + S KK A+ +E++ D+L
Sbjct: 180 EGESKKKLERVITLAEGGLLEVAPGMSRGI--DMSKRKKTADAESEKQAKEVE--DVLGQ 235
Query: 3219 VTSNEYIIHTVAAPVKKSESIESEETPEDDKKVSXXXXXXXXXXXXPGNTEKVIEIFGAA 3040
+ V + ESE+ +D + + G AA
Sbjct: 236 EPEDAPDGEGERDEVNGVKREESEDNQDDLEDIDAILPVEFPALEPRGTL--------AA 287
Query: 3039 TEPTKEKFEFAQRLVLSADEEDEYKRLVPTMARKYPFSLDPFQQSSVLCMERGESLFVAA 2860
+ K E+A + + E ++ LVP MAR++PF LD FQ+ +V +E G+S+FVAA
Sbjct: 288 SSARKAGREWAHMVDIRR-EIPNFRELVPDMAREWPFELDTFQKEAVYHLENGDSVFVAA 346
Query: 2859 HTSAGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPE 2680
HTSAGKTVVAEYAIAL H T+A+YTSPIKALSNQKFRDF+Q F +VG++TGD+Q++PE
Sbjct: 347 HTSAGKTVVAEYAIALAAKHMTKAIYTSPIKALSNQKFRDFRQTFDEVGILTGDVQINPE 406
Query: 2679 AACLIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVM 2500
A+CLIMTTEILRSMLY G+++IRD+E+V+FDEVHY+N+ ERG VWEEV+IMLP HV +++
Sbjct: 407 ASCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDYERGVVWEEVIIMLPEHVSLIL 466
Query: 2499 LSATVPNCVEFADWVGRIKNRKINVISTDRRPVPLEHFLYTGQDGKTQKDLFKIIDRSGQ 2320
LSATVPN EFA WVGR K + I VIST +RPVPLEH+L+ G K + KI+D +
Sbjct: 467 LSATVPNTYEFASWVGRTKQKDIYVISTPKRPVPLEHYLWAG------KKIHKIVDSEKK 520
Query: 2319 FILKGYNDA------KDSKAKIYE------------------KEKAXXXXXXXXXXXXXX 2212
FI G+ +A KD K E + A
Sbjct: 521 FIETGWKEANLAIQGKDKPPKAIEASTGPARGGGNQRGRGGAQRGANQPRGGARGGGQQR 580
Query: 2211 XXXXXXXXRNWPG--------------KNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCD 2074
+ PG DKN++++L+ ++K + LP +FVFS+KRC+
Sbjct: 581 GRGGPPRASHTPGHMGRTGRPGGFTSAAQDKNLWVHLVQFLKKDNLLPACIFVFSKKRCE 640
Query: 2073 ENAQMLASMNLTTEVEKQHVRLFFSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGIL 1894
ENA L++ + T EK H+ + + + RLK D+ LPQ++ +R+L RG AVHH G+L
Sbjct: 641 ENADALSNQDFCTAQEKSHIHMIIERSIARLKPEDRVLPQIIRLRELLSRGIAVHHGGLL 700
Query: 1893 PILKEVVELLFQKGYVKILFATETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQM 1714
PI+KE+VE+LF + VK+LFATETFAMG+N+P R VVF KHDG + R L PGEYTQM
Sbjct: 701 PIVKEMVEILFAETLVKVLFATETFAMGLNLPTRTVVFSGYRKHDGHQFRNLLPGEYTQM 760
Query: 1713 AGRAGRRGLDLTGTVIIICK--DSTVPQPDVLKNLISGQALRLESKFRVTYSMILNLLRV 1540
AGRAGRRGLD G+VII+ D P D L+ +I G+ +L S+FR+TY+MILNLLRV
Sbjct: 761 AGRAGRRGLDTVGSVIIVPPGGDEAPPVTD-LRQMILGEPSKLRSQFRLTYNMILNLLRV 819
Query: 1539 EQLKIEDMLQRSYVESDSLRESKEKRKSLVDTKNAIQTMSTIECSTCSPNSQLRDYHDAL 1360
E LKIE+M++RS+ E + + E K++ ++ + + C C + + + H A
Sbjct: 820 EALKIEEMIKRSFSEHATQQLLPEHEKAVKLSEADLAKIKRDSCPIC--DVHMDECHQAG 877
Query: 1359 AVFLRKSEHIWPKLNDENVINKLLCSGRFLIVNSAQQQLQNECVLLIK------ELNNKT 1198
F +E ++ L V KL GR ++ ++ ++ +LL + N T
Sbjct: 878 EDFKVATEELYRALLAIPVGRKLFTPGRLIVY--MKEGVRTPGILLAEGPSKAGTAANPT 935
Query: 1197 LQILVASADADETTNKNAAAIGFSKLPKSELSWLTEENSLL----STSKFGTRGAAHCST 1030
L +L D L + LL + +K+ T AH
Sbjct: 936 LHVLEIKTGRD----------------------LRNDTDLLPFTPTLAKWFTPLPAH-KK 972
Query: 1029 NIRSFRLCEIPLSGIVAVMKKCAKGVQSGEILQEYNMTQIPR-FRDRELSENVKKLLQQI 853
NI + + IPLS +V + K K + +P F + K+ L QI
Sbjct: 973 NIYT-KTVHIPLSDVVCLTKHITKSI-------------VPELFDGGDGYTKAKEALHQI 1018
Query: 852 TTAVPGLKSGEIETYTWKELGSFCQNLDTSFDTDLLEKLEYNLNLPQSFPARHCTRFDEH 673
+ E++ K L S + + + + +S A C F +H
Sbjct: 1019 CKSWSAPIWDEMDLSRIKSL---------SIHEIITRRRDAEIKCTKS-SAVDCDLFLKH 1068
Query: 672 FSVLRDRIRIERKIXXXXXXXXXXXXXXXXEYHNRLKVLEALNFVEQ-KMVSLKGRIGCE 496
+++ D+ I+ KI +Y R++VL+ L+F++ + LKG++ CE
Sbjct: 1069 YAMCHDQWLIKTKIDELRQSLSNQNLQLLPDYEQRIQVLKDLSFIDDASRIQLKGKVACE 1128
Query: 495 IHH-QELLITELILDYKFHQRSPAELAALLSTLTCQY------NSGREMQFGGDTVFGEI 337
IH EL++TELIL+ PAE+AALLS Q N ++ G T+ E+
Sbjct: 1129 IHSGDELVLTELILENVLADYEPAEIAALLSAFVFQEKTDMVPNLTSNLERGQKTII-EL 1187
Query: 336 SESVKSVLTRLESVASKHKSQISDLGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLI 157
SE V +V T + + S + SD + RF LMEVVYEWA G F I +TD EG I
Sbjct: 1188 SEKVNAVQTLHQVILSSDEG--SDFASKPRFGLMEVVYEWARGMSFKNITNLTDVLEGTI 1245
Query: 156 VKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSASIRRDIVFAASLY 13
V+ I RLDE C++V+NA RI+GDP L +KM I+RDI ASLY
Sbjct: 1246 VRTISRLDETCREVKNAARIIGDPELYQKMATTQELIKRDITAVASLY 1293
>gi|15232685|ref|NP_190280.1| DEAD/DEAH box helicase, putative
[Arabidopsis thaliana]
gi|11346339|pir||T45632 helicase homolog F13I12.10 - Arabidopsis
thaliana
gi|6522577|emb|CAB61942.1| putative helicase [Arabidopsis thaliana]
Length = 1347
Score = 657 bits (1694), Expect = 0.0
Identities = 438/1233 (35%), Positives = 657/1233 (52%), Gaps = 74/1233 (6%)
Frame = -1
Query: 3483 IKGSPGNVPFLPGFLEEL--------DDLLAGETTAKSTSGEESKFL--SFKDDATLLNT 3334
++GS N PF PG LE+ + + +G+ + +G ++ + SFK L +
Sbjct: 158 LRGSVNNRPFRPGGLEDSQSSERVLPEGVSSGQWVQELLNGGPAQTVPPSFKQSLDLGDL 217
Query: 3333 IPTIGQ-IVLPNHSSVKKPAETP---KSINIEEMDMFDLLDMVTSNEYIIHTVAAPVKK- 3169
+P V +HSS ++ +S+++ ++ F T+ A P K
Sbjct: 218 MPYPQTWSVYEDHSSHGNASDENSVCRSMSLVYINYFTFNCDHTAGSESPKAEAEPDAKA 277
Query: 3168 ------SESIESEETPEDDKKVSXXXXXXXXXXXXPGNTEKVIEIFGAATEPTKEKFEFA 3007
S+ +E++ T D+ +S G+++K + G AT+
Sbjct: 278 SISNEVSKGLETDVTVLDEI-LSSAKTAIMSEEAVTGSSDKQLRKEGWATKGD------- 329
Query: 3006 QRLVLSADEEDEYKRLVPTMARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAE 2827
S D D + LVP MA ++PF LD FQ+ ++ C+E+GES+FVAAHTSAGKTVVAE
Sbjct: 330 -----SQDIADRFYELVPDMAIEFPFELDNFQKEAICCLEKGESVFVAAHTSAGKTVVAE 384
Query: 2826 YAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEIL 2647
YA AL H TRAVYT+PIK +SNQK+RDF F DVGL+TGD+ + PEA+CLIMTTEIL
Sbjct: 385 YAFALATKHCTRAVYTAPIKTISNQKYRDFCGKF-DVGLLTGDVSIRPEASCLIMTTEIL 443
Query: 2646 RSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEF 2467
RSMLY G+++IRD+EWV+FDEVHY+N+ ERG VWEEV+IMLP H+ V+LSATVPN EF
Sbjct: 444 RSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHINFVLLSATVPNTFEF 503
Query: 2466 ADWVGRIKNRKINVISTDRRPVPLEHFL-YTGQDGKTQKDLFKIIDRSGQFILKGYNDAK 2290
ADW+GR K ++I V T +RPVPLEH L Y+G+ L+K+ + F+ KG DAK
Sbjct: 504 ADWIGRTKQKEIRVTGTTKRPVPLEHCLFYSGE-------LYKVCENE-VFLSKGIKDAK 555
Query: 2289 DSKAKIYEKEKAXXXXXXXXXXXXXXXXXXXXXXRNWPGKNDKNI--------------- 2155
DS+ K + + GK +K+
Sbjct: 556 DSQKKKNSNAVSVAPKQQMGSSAHQDGSKSQKHEAHSRGKQNKHSSVKDVGKSSYSGNSQ 615
Query: 2154 ------------YLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVR 2011
+L LIN + LP+VVF FS+ CD A L +LT+ EK +R
Sbjct: 616 NNGAFRRSAASNWLLLINKLSKMSLLPVVVFCFSKNYCDRCADALTGTDLTSSSEKSEIR 675
Query: 2010 LFFSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFA 1831
+F + RLKGSD+ LPQVL ++ L RG VHH+G+LPI+KEVVE+LF +G +K+LF+
Sbjct: 676 VFCDKAFSRLKGSDRNLPQVLRLQSLLHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFS 735
Query: 1830 TETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKD 1651
TETFAMGVN PAR VVFD++ K DG E R L PGEYTQMAGRAGRRGLD TGTV+++C+D
Sbjct: 736 TETFAMGVNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRD 795
Query: 1650 STVPQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESK 1471
VP L+ +I G A RLES+FR+TY MIL+LLRVE+LK+EDML+RS+ E + ++
Sbjct: 796 E-VPDESDLRRVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLP 854
Query: 1470 EKRKSLVDTKNA----IQTMSTIECSTC-SPNSQLRDYHDALAVFLRKSEHIWPKLNDEN 1306
EK++ L+ ++ I+ I S C + DY+D + + +
Sbjct: 855 EKQQLLMIKRSLPTKHIEIDLLIYSSRCIKGEPAIEDYYDMYMEANEYNNKMSEAVMQSP 914
Query: 1305 VINKLLCSGRFLIVNSAQQQLQNECVLLIKELNNKTLQILVASADAD-ETTNKNAAAIGF 1129
L GR +++ S + N +++K +N Q +V ++ KN +IG
Sbjct: 915 YAQSFLVQGRVVVMKSG-MGIDNLLGIVLKGPSNTNRQYVVLVIKSEIPPPEKNMVSIGK 973
Query: 1128 SKLPKSELSWLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKGVQ 949
S+ ++ ++ +F T+ ++ + E+P G+ A + KG
Sbjct: 974 KSSDPSQGYFIAPKSKRGFEEEFYTKPSSRKGPVVIKI---ELPYHGVAAGVGYEVKGFD 1030
Query: 948 SGEIL----QEYNMTQIPRFRD---RELSENVKKLL------QQITTAVPGLKSGEIETY 808
+ E L + + Q+ D S+ V++LL + A+ +K +++
Sbjct: 1031 NKEFLCICDSKIKIDQVRLLEDGNKAAFSQTVQQLLDLKSDGNKFPPALDPVKDLKLKD- 1089
Query: 807 TWKELGSFCQNLDTSFD-TDLLEKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERKI 631
+ ++T + T+LL+K+ N C + +EH + R+ + + +
Sbjct: 1090 --------AELVETYYKWTNLLQKMSMN-------KCHGCVKLEEHMKLAREIKKHKTDL 1134
Query: 630 XXXXXXXXXXXXXXXXEYHNRLKVLEALNFVEQKM-VSLKGRIGCEIHH-QELLITELIL 457
+ R+ VL+ + ++ + V +KGR+ CE++ +EL+ T +
Sbjct: 1135 KDLEFQMSDEALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVACEMNSGEELICTVCLF 1194
Query: 456 DYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRLESVASKHKS 277
+ +F + P E A++S Q + + + + RL + +++
Sbjct: 1195 ENQFEELEPEEAVAIMSAFVFQQKNTSAPTL--TPKLAKAKQRLYDTAIRLGELQAQYNL 1252
Query: 276 QISD---LGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNA 106
QI ++F L+EVVYEWA GTPF +I E+TD EGLIV+ I RLDE C++ +NA
Sbjct: 1253 QIDPEEYAQENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLDETCREFKNA 1312
Query: 105 GRIVGDPALVEKMEEVSASIRRDIVFAASLYTT 7
I+G+ AL +KM+ S +I+RDIVFAASLY T
Sbjct: 1313 AAIMGNSALHKKMDAASNAIKRDIVFAASLYVT 1345
>gi|50251266|dbj|BAD28046.1| putative Helicase SKI2W [Oryza sativa
(japonica cultivar-group)]
Length = 1281
Score = 657 bits (1694), Expect = 0.0
Identities = 412/1061 (38%), Positives = 601/1061 (55%), Gaps = 64/1061 (6%)
Frame = -1
Query: 2997 VLSADEE--DEYKRLVPTMARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEY 2824
++ DE+ + +LVP MA +YPF LD FQ+ ++ +++GES+FVAAHTSAGKTVVAEY
Sbjct: 263 LVGGDEDIVTNFYKLVPDMAIEYPFELDKFQKEAIYYLQKGESVFVAAHTSAGKTVVAEY 322
Query: 2823 AIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILR 2644
A AL H TRAVYT+PIK +SNQK+RDF F DVGL+TGD+ + PEA CLIMTTEILR
Sbjct: 323 AFALATKHCTRAVYTAPIKTISNQKYRDFCGKF-DVGLLTGDVSIRPEATCLIMTTEILR 381
Query: 2643 SMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEFA 2464
SMLY G+++IRD+EWV+FDEVHY+N+ ERG VWEEV+IMLP H+ IV+LSATVPN VEFA
Sbjct: 382 SMLYRGADIIRDIEWVIFDEVHYVNDAERGVVWEEVIIMLPKHINIVLLSATVPNTVEFA 441
Query: 2463 DWVGRIKNRKINVISTDRRPVPLEHFL-YTGQDGKTQKDLFKIIDRSGQFILKGYNDAKD 2287
DW+GR K +KI+V ST++RPVPLEH L Y+G ++FKI ++ F+ +GY +AK+
Sbjct: 442 DWIGRTKQKKIHVTSTNKRPVPLEHCLFYSG-------EVFKICEKDA-FLTQGYREAKE 493
Query: 2286 -------SKAKIYEKEKAXXXXXXXXX-------------------XXXXXXXXXXXXXR 2185
SK + K
Sbjct: 494 VFKKKNSSKLGMKPGSKPGTTAVRAGTQGRNPDTSSRGRDQKNPKHHHASSSAAAVQQST 553
Query: 2184 NWPGKNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLF 2005
+ P +++ + ++ LIN + +P+V+F FS+ RCD +A+ + +LT+ EK +RLF
Sbjct: 554 SGPRRSESSFWMPLINNLLKKSLVPVVIFCFSKNRCDRSAESMFGADLTSNSEKSEIRLF 613
Query: 2004 FSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATE 1825
+ RLKGSD+ LPQV+ ++ L RG VHH+G+LPI+KEVVE+LF +G +K+LF+TE
Sbjct: 614 CDKAFSRLKGSDRNLPQVVGIQSLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTE 673
Query: 1824 TFAMGVNMPAR----CVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIIC 1657
TFAMGVN PAR VVFDS+ K DG E R L PGEY QMAGRAGRRGLD GTVI++C
Sbjct: 674 TFAMGVNAPARTLKDLVVFDSLRKFDGKEHRKLLPGEYIQMAGRAGRRGLDNIGTVIVMC 733
Query: 1656 KDSTVPQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRE 1477
+D +P+ LKNLI G+ RLES+FR+TY+MIL+LLRVE+LK+EDML+RS+ E + +
Sbjct: 734 RDE-IPEESDLKNLIVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFHAQKN 792
Query: 1476 SKEKRKSLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPKLNDENVIN 1297
EK K L+ Q TIEC P + +Y++ + E I +
Sbjct: 793 LPEKEKLLLQMLR--QPTKTIECIKGEP--AIEEYYEMVLEAEAHRESITEAIMQLPASQ 848
Query: 1296 KLLCSGRFLIVNSAQQQLQNECVLLIKELNNKTLQILV--------ASADADETTNKNAA 1141
+ L GR ++V S Q + +++K + Q +V +SA A +++N+N
Sbjct: 849 QSLTPGRLVVVKS-QSDDDHLLGVIVKTPSAALKQYVVLVLTGDCTSSALAPDSSNQNEK 907
Query: 1140 AIGFSK-----LPKSELSWLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAV 976
G K +PK + S E S +ST K + + + +L P G +
Sbjct: 908 EAGDFKQGYFVIPKGKRSMEDEYFSSVSTRK---------GSGVINIKL---PYKGDASG 955
Query: 975 MKKCAKGVQSGEIL----QEYNMTQIPRFRDRE---LSENVKKLLQQ------ITTAVPG 835
M + +++ EI+ + + Q+ D S+ V+ L+++ A+
Sbjct: 956 MGFEVRAIENKEIMNICASKIKIDQVRLLEDPSKTVYSKTVQMLIKEQPDGNKYPAALDA 1015
Query: 834 LKSGEIETYTWKELGSFCQNLDTSFDTDLLEKLEYNLNLPQSFPARHCTRFDEHFSVLRD 655
+K +++ E Q LL+K+ N C + EH +++++
Sbjct: 1016 IKDLKMKDMLLVENYYAYQR--------LLQKMSEN-------KCHGCIKLKEHIALMKE 1060
Query: 654 RIRIERKIXXXXXXXXXXXXXXXXEYHNRLKVLEALNFVEQKM-VSLKGRIGCEIHH-QE 481
+ + ++ E+ R+ VL+ +++++ + V LKGR+ CE++ +E
Sbjct: 1061 QKVYKDQLNDLKYEMSDEALQQMPEFQGRIDVLKEIHYIDSDLVVQLKGRVACEMNSGEE 1120
Query: 480 LLITELILDYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRLE 301
L+ TE + + + P E A++S L Q + E + + + RL
Sbjct: 1121 LISTECLFENQLDDLEPEEAVAIMSALVFQQRNTSEPSL--TPKLADARKRIYDTAIRLG 1178
Query: 300 SVASKHKSQISD---LGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDE 130
+ + K + ++F L+EVVYEWA GTPF I E+TD EGLIV+ I RLDE
Sbjct: 1179 KLQREFKVPVDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVSEGLIVRTIVRLDE 1238
Query: 129 VCKDVRNAGRIVGDPALVEKMEEVSASIRRDIVFAASLYTT 7
C++ RNA I+G+ AL +KME S +I+RDIVFAASLY T
Sbjct: 1239 TCREFRNAASIMGNSALHKKMETASNAIKRDIVFAASLYVT 1279
>gi|49067436|ref|XP_398008.1| hypothetical protein UM00393.1 [Ustilago
maydis 521]
gi|46095704|gb|EAK80937.1| hypothetical protein UM00393.1 [Ustilago
maydis 521]
Length = 1301
Score = 654 bits (1687), Expect = 0.0
Identities = 401/1037 (38%), Positives = 571/1037 (54%), Gaps = 51/1037 (4%)
Frame = -1
Query: 2970 YKRLVPTMARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTR 2791
+ LVP MA +PF LD FQ+ +V +E+G+S+FVAAHTSAGKTVVAEYAIAL Q H TR
Sbjct: 319 FHELVPQMAHSFPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIALAQKHMTR 378
Query: 2790 AVYTSPIKALSNQKFRDFKQIFG--DVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEV 2617
+YTSPIKALSNQK+RDFKQ FG +VG++TGD+Q++PEA CLIMTTEILRSMLY G+++
Sbjct: 379 CIYTSPIKALSNQKYRDFKQTFGAANVGILTGDVQINPEAPCLIMTTEILRSMLYRGADL 438
Query: 2616 IRDLEWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNR 2437
IRD+E+V+FDEVHY+N++ERG VWEEV+I+ P H+ +++LSATVPN EFADWVGR K +
Sbjct: 439 IRDVEFVIFDEVHYVNDQERGVVWEEVIILCPQHINLILLSATVPNTKEFADWVGRTKKK 498
Query: 2436 KINVISTDRRPVPLEHFLYTGQDGKTQKDLFKIIDRSGQFILKGYNDAKDSKAKIYEKEK 2257
I VIST +RPVPLEHFLY G K++FKI+D QF+ G +A ++ + EKE+
Sbjct: 499 DIYVISTPKRPVPLEHFLYAG------KEMFKIVDARAQFLGSGLKEAGEALKRKQEKER 552
Query: 2256 -AXXXXXXXXXXXXXXXXXXXXXXRNWPGKN----------------------------- 2167
A N G+
Sbjct: 553 EANAAATGGGGGAARGGRGGGAAGSNSRGRGGMTPARGAAPRGRGGAAGGRGGGFPGTTT 612
Query: 2166 -----DKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFF 2002
DKN++++L+ +++ + LP VVFVFS+KRC+E A + + +L T +K V +
Sbjct: 613 VRTGLDKNLWIHLVGHLRKKELLPCVVFVFSKKRCEEYATSMPNTDLNTAKDKSEVHILI 672
Query: 2001 SQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATET 1822
+ + RLKG+DKELPQ+ MRDL RG VHH G+LPI+KE+VELLFQ+G VK+LFATET
Sbjct: 673 EKSLTRLKGTDKELPQIKRMRDLLGRGIGVHHGGLLPIVKEIVELLFQRGLVKVLFATET 732
Query: 1821 FAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDSTV 1642
FAMGVNMPAR VVF SI KHDG R L PGEYTQM+GRAGRRGLD TG VII D +
Sbjct: 733 FAMGVNMPARSVVFSSIRKHDGHGFRELLPGEYTQMSGRAGRRGLDATGVVIINAADQ-L 791
Query: 1641 PQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEKR 1462
P+ VL + GQ +L S+FR+TY+MILNLLRVE LK+E+M++RS+ E+ + + +++
Sbjct: 792 PETAVLHKTLLGQPTKLSSQFRLTYNMILNLLRVEALKVEEMIKRSFSENAAQKMLPDQQ 851
Query: 1461 KSLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPKLNDENVINKLLCS 1282
K + + + + + Q+ Y+D A + ++ ++ K +
Sbjct: 852 KKAQELEKKLAKAQHPQPPEL--DEQMSTYYDLCAAVVASNQSLFELALGHQQGAKNFGA 909
Query: 1281 GRFLIVNSAQQQLQNECVLLIKELNNKTLQILVA------SADADETTNKNAAAIGFSKL 1120
GR +I+ + ++++++ +L A + D N + G + L
Sbjct: 910 GRVVILRDG--HFDFDIAAIVRQVSASEFLVLAAVTPERKKGELDLQGCNNGESGGVAPL 967
Query: 1119 PKSELSWLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKGVQSGE 940
W + + + R E+ LS I V ++ K
Sbjct: 968 ------WPPRVRAAKAELVYDLR---------------EVSLSSISLVTEQTIK------ 1000
Query: 939 ILQEYNMTQIPRFRDRELSENVKKLLQ-----QITTAVPGLKSGEIETYTWKELGSFCQN 775
++ I R ++ ++ LL TT G++ E W +L +
Sbjct: 1001 ----LDVALITAHRISAMNRALESLLPIRESFATTTQAEGIREAE-----WTKL----RR 1047
Query: 774 LDTSFDTDLLEKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERKIXXXXXXXXXXXX 595
LD F L + Y Q F ++++ I R +
Sbjct: 1048 LD--FQEALRSRDSYASKTHQHLSLLDSPTFSTDYALVSTYKTITRTLEQTLKLQSDENL 1105
Query: 594 XXXXEYHNRLKVLEALNFVE--QKMVSLKGRIGCEIHH-QELLITELILDYKFHQRSPAE 424
+YH R+ VL+ L +++ + V LKGR+ CE++ EL++TELIL+ + P +
Sbjct: 1106 ELLPDYHQRVSVLKTLRYIDPITESVLLKGRVACEVNSANELVLTELILENVLVEYEPEQ 1165
Query: 423 LAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRLESVASKHKSQISDLGCEIRF 244
L ALLS Q + G + G + + + R+ ++ + D +
Sbjct: 1166 LVALLSIFLTQEKTDDIPVLEGKILEG--YQKILEIAERVSAIQLSNSLASEDFTAPNKI 1223
Query: 243 DLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALVEKME 64
L+ VVYEWA GT F I MTD QEG IV+ I RLDE C+++R+A R++GD L EK++
Sbjct: 1224 ALVPVVYEWAKGTDFATIAAMTDIQEGSIVRVITRLDETCREIRDAARVIGDRDLGEKIQ 1283
Query: 63 EVSASIRRDIVFAASLY 13
IRRDIVFAASLY
Sbjct: 1284 SCQTLIRRDIVFAASLY 1300
>gi|31207827|ref|XP_312880.1| ENSANGP00000014710 [Anopheles gambiae]
gi|21296331|gb|EAA08476.1| ENSANGP00000014710 [Anopheles gambiae str.
PEST]
Length = 1173
Score = 653 bits (1684), Expect = 0.0
Identities = 438/1226 (35%), Positives = 645/1226 (51%), Gaps = 27/1226 (2%)
Frame = -1
Query: 3603 GKIIGFVENERIIVGS-ANTSMSINRAPYKQRSLHTTAGNSIKGSPGNVPFLPGFLEELD 3427
GK++ F+E + GS A SMS+ R P T + +S +GS PF PG +E +
Sbjct: 67 GKVLDFIETQVQNAGSTAKNSMSLQREP-------TESIDSARGSASYFPFWPGGFDEPE 119
Query: 3426 DLLAG-------ETTAKSTSGEESKFLSFKDDATLLNTIPTIGQIVLPNHSSVKKPAETP 3268
+LAG ET KS + + F+ T + ++
Sbjct: 120 SVLAGLVPSPLFETDLKSCPPGFATGVEFEAPPT--------------GTDGARATEDSG 165
Query: 3267 KSINIEEMDMFDLLDMVTSNEYIIHTVAAPVKKSESIESEETPEDDKKVSXXXXXXX--- 3097
KS M DLL + S E + + ++ S + T ++
Sbjct: 166 KS------GMVDLLSAIASEEAFVELLPEGLQTQLSTNDQSTQGTQQEPLPAGIDEEEGL 219
Query: 3096 -XXXXXPGNTEKVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYKRLVPTMARKYPFSLD 2920
G E+V++I T + E+A+ L +S +D Y + +PTMA ++PF LD
Sbjct: 220 LAVAGELGAGEQVLKI-STVTNNALQSAEWAEMLDISKPVDDFYVK-IPTMAHRFPFELD 277
Query: 2919 PFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRD 2740
FQ+ ++L +E +FVAAHTSAGKTVVAEYAIAL + H T+ +YTSPIKALSNQK+RD
Sbjct: 278 IFQKQAILKLEEHSHVFVAAHTSAGKTVVAEYAIALSKKHMTKTIYTSPIKALSNQKYRD 337
Query: 2739 FKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEE 2560
FK F DVGL+TGDIQ+ P A+CLIMTTEILRSMLY GS++ RDLE+V+FDEVHYI + +
Sbjct: 338 FKTTFQDVGLITGDIQIDPTASCLIMTTEILRSMLYCGSDITRDLEYVIFDEVHYITDSD 397
Query: 2559 RGHVWEEVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDRRPVPLEHFLY 2380
RGHVWEEVLI+LP HV IVMLSATVPN +EFA+WVG+ K +++ V+ST +RPVPLEH+LY
Sbjct: 398 RGHVWEEVLILLPDHVCIVMLSATVPNTIEFANWVGKTKKKRVWVVSTAKRPVPLEHYLY 457
Query: 2379 TGQDGKTQKDLFKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXXXXXXXXXXXXXXXXX 2200
TG GK++ D F I++ QF+ GY AK+S YE ++A
Sbjct: 458 TGFGGKSKDDSFLIVNAQSQFVQDGYRRAKES----YEAKQA--------------KSTG 499
Query: 2199 XXXXRNWPGKNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQ 2020
+ + ++ +++ LI++++ ++LP+V F SR RCD NA+ L S +LTT EK
Sbjct: 500 RRTNGPYSQRQEQTLWVGLIDHLQKKEKLPVVAFTLSRNRCDNNAEALMSCDLTTAREKY 559
Query: 2019 HVRLFFSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKI 1840
+ FF QC+QRL +D+ LPQV ++ RG +HHSGILPILKE+VE+LF +G VKI
Sbjct: 560 AITSFFQQCLQRLVPADRVLPQVQQIQSCLERGIGIHHSGILPILKEIVEMLFARGLVKI 619
Query: 1839 LFATETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIII 1660
LFATETFAMGVNMPAR
Sbjct: 620 LFATETFAMGVNMPAR-------------------------------------------- 635
Query: 1659 CKDSTVPQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLR 1480
+ +P LK +I G+ +RLES+FR+TY+M+L LLRVE + +E+M+ S+ E D +
Sbjct: 636 ---TNLPLDGELKTMILGKPVRLESQFRLTYAMMLYLLRVELVSVENMMLHSFREFDKRQ 692
Query: 1479 ESKEKRKSLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPK-LNDENV 1303
+ + + L + + +S + L ++++A + +L + PK L
Sbjct: 693 QMPQSKLELNQVQEKMSALSKLS----DHLQPLCEFYEAASEYLNLRNELLPKQLCQPKA 748
Query: 1302 INKLLCSGRFLIVNSAQQQLQNECVLLIKELNNKTLQILVASAD---ADETTNKNAAAIG 1132
IN+L GR ++V + +L + ++K L+++V D + +T + +
Sbjct: 749 INELKV-GRVVVVTDEHHYNKLGILLSVSVQSHKELKLVVLVLDHCASGKTQPASPETLN 807
Query: 1131 FSKLPKSELSWLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKGV 952
L LS + L G H + L E+ I KC
Sbjct: 808 RGPLWHQMLSLALPYQTFLPEGVGG-----HAVLTLAPVNLIELTKHTI-----KC---- 853
Query: 951 QSGEILQEYNMTQIPRFRDRELSENVKKLLQQI-----TTAVPGLKSGEIETYTWKELGS 787
+ I++ + IPRFRD S++ + + + T G +G + EL
Sbjct: 854 DANGIIRSWEYRLIPRFRDAPPSQSTIEAVAALAELNATVVQAGSVTGTL------ELVR 907
Query: 786 FCQNLDTSFDTDLLEKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERKIXXXXXXXX 607
F ++L T L+ + LN + P F+ F+V+ DR ++ERK+
Sbjct: 908 FPRDLTNLELTQQLQTAQGRLN--RWLPYTGMADFEHEFAVVYDRKQLERKLDELKYQAS 965
Query: 606 XXXXXXXXEYHNRLKVLEALNFV-EQKMVSLKGRIGCEIHHQELLITELILDYKFHQRSP 430
+Y +L+VL+ L ++ + + V++KGR+ CE+ EL+ITEL++ P
Sbjct: 966 YESLSLYPDYCRKLQVLQELKYIDDMQQVAMKGRVACEMGQNELMITELVMRNILTDLQP 1025
Query: 429 AELAALLSTLTCQYNSG-----REMQFGGDTVFGEISESVKSVLTRLESVASKHKSQISD 265
AE+AALLS+L Q S E + F E+ ++ ++ R V K +
Sbjct: 1026 AEIAALLSSLVFQAKSDVTPKLTETLQKAEAQFREVENDIR-LVERQYGVTDVCKKE--- 1081
Query: 264 LGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDP 85
E+ F L EVVYEWA PF +IM +TD +EG+IV+CIQ+L+E +V++A RI+GDP
Sbjct: 1082 ---ELNFGLTEVVYEWARNKPFAEIMLLTDIKEGIIVRCIQQLNETLCNVKDAARIIGDP 1138
Query: 84 ALVEKMEEVSASIRRDIVFAASLYTT 7
L KMEE S +I+RDIVFAASLYT+
Sbjct: 1139 VLHSKMEEASNAIKRDIVFAASLYTS 1164
>gi|19075595|ref|NP_588095.1| putative DEAD/DEAH box helicase
[Schizosaccharomyces pombe]
gi|7492647|pir||T41378 probable helicase - fission yeast
(Schizosaccharomyces pombe)
gi|3136048|emb|CAA19107.1| SPCC550.03c [Schizosaccharomyces pombe]
Length = 1213
Score = 640 bits (1651), Expect = 0.0
Identities = 442/1227 (36%), Positives = 660/1227 (53%), Gaps = 30/1227 (2%)
Frame = -1
Query: 3603 GKIIGFVENERIIVG-SANTSMSINRAPYKQRSLHTTAGNSIKGSPGNVPFLPGFLEELD 3427
GKI+G+ E +I ++ S S R P + ++GS N+PFL
Sbjct: 95 GKIMGYKEVPELIEDLNSKNSSSFLRKPSSKNEF-------VRGSTSNIPFL-------- 139
Query: 3426 DLLAGETTAKSTSGEESKFLSFKDDATLLNTIPTIGQIVLPNHSSVKKPAETPKSINIE- 3250
A ++ + +GE S ++ + LL P + + +S T ++N E
Sbjct: 140 ---ADDSDVDAIAGEPSVKMALYGEDGLLQVPPGFSRGLSMTATS------TTDNLNDEF 190
Query: 3249 EMDMFDLLDMVTSNEYIIHTVAAPVKKSESIESEETPEDDKKVSXXXXXXXXXXXXPGNT 3070
+ + +D + +SN + T+ + +++ S+ + DD
Sbjct: 191 DPEKWDTKKVKSSNRNFV-TIHELNEHLKNVNSKHSEIDDLLPD---------------- 233
Query: 3069 EKVIEIFGAATEPTKEKFEFAQRLVLSADEEDEYKRLVPTMARKYPFSLDPFQQSSVLCM 2890
++ I +T ++ ++A + SA E+ +++LVP MA +PF LD FQ+ ++ +
Sbjct: 234 KRSIVSLPPSTLNLHKQPDYAHVVDSSAPIEN-FQQLVPEMALDFPFELDNFQKEAIYHL 292
Query: 2889 ERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGL 2710
E G+S+FVAAHTSAGKTVVAEYAIAL Q H T+A+YTSPIKALSNQKFRDFK F DVG+
Sbjct: 293 EMGDSVFVAAHTSAGKTVVAEYAIALAQKHMTKAIYTSPIKALSNQKFRDFKHKFEDVGI 352
Query: 2709 VTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVLI 2530
+TGD+Q++PE +CL+MTTEILRSMLY G+++IRD+E+V+FDEVHY+N+ ERG VWEEV+I
Sbjct: 353 LTGDVQVNPEGSCLLMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDLERGVVWEEVII 412
Query: 2529 MLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDRRPVPLEHFLYTGQDGKTQKD 2350
MLP HV +++LSATVPN EFA WVGR K + I VIST +RPVPLEH+L+ Q+
Sbjct: 413 MLPPHVTLILLSATVPNTKEFASWVGRTKKKNIYVISTLKRPVPLEHYLWVKQN------ 466
Query: 2349 LFKIIDRSGQFILKGYNDAKDSKAKIYEKEKAXXXXXXXXXXXXXXXXXXXXXXRNWPG- 2173
+FKI+D+ G+F++ GY A D+ K + A G
Sbjct: 467 MFKIVDQHGRFLMDGYKSANDALKKPDKPVIAKDNKNSARGRGAARGRGVQTNMMRGRGS 526
Query: 2172 -----KNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRL 2008
+ D N +++LI ++ + LP++VFVFS+KRC+E L + +L EK V +
Sbjct: 527 AKSVERRDANTWVHLIGHLHKQNLLPVIVFVFSKKRCEEYVDTLTNRDLNNHQEKSEVHV 586
Query: 2007 FFSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFAT 1828
+ V RLK D+ LPQ+ MR++ RG AVHH G+LPI+KE+VE+LFQ+G VK+LFAT
Sbjct: 587 VIEKAVARLKKEDRLLPQIGRMREMLSRGLAVHHGGLLPIIKEIVEILFQRGLVKVLFAT 646
Query: 1827 ETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDS 1648
ETFAMGVNMPA+ VVF KHDG R L PGEYTQ +GRAGRRGLD+TGTVII+ + S
Sbjct: 647 ETFAMGVNMPAKSVVFSGTQKHDGRNFRDLLPGEYTQCSGRAGRRGLDVTGTVIILSR-S 705
Query: 1647 TVPQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDS---LRE 1477
+P L+++I G + +L S+FR+TY+MILNLLRVE L+IEDM++RS+ E+ + + +
Sbjct: 706 ELPDTASLRHMIMGPSSKLISQFRLTYNMILNLLRVETLRIEDMIKRSFSENVNQTLVPQ 765
Query: 1476 SKEKRKSLVDTKNAI-QTMSTI---ECSTCSPNSQ-LRDYHDALAVFLRKSEHIWPKLND 1312
+EK KS + +A+ + MS + E +C +S+ ++Y K H
Sbjct: 766 HEEKIKSFEEKLSALKKEMSDVDLKEIKSCLLSSESFKEY--------TKKMHF------ 811
Query: 1311 ENVINKLLCSGRFLIVNSAQQQLQNECVLLIKELN-NKTLQILVASADADETTNKNAAAI 1135
R + + ++ ++ V++ ++L+ +T+ +L+ ++ TN + +
Sbjct: 812 -----------RAITTANGKRIFKDGRVIVFQQLDFTRTVGVLLGTS---IRTNASDCTL 857
Query: 1134 GFSKLPKSELSWLTEENSLLSTSKFGTRGAAHCST-------NIRSFRLCEIPLSGIVAV 976
E+++L +N+L S A F+ I LSGI V
Sbjct: 858 --------EVAYLNPQNNLKRPSDLLAFADAFNDVYDNAIFDESNQFKYGLINLSGIERV 909
Query: 975 MKKCAKGVQSGEILQEYNMTQIPRFRDRELSENVKKLLQQITTAVPGLKSGEIETYTWKE 796
+ + SG I RDR +KL +Q ++ E W +
Sbjct: 910 CNTILR-IDSGGI------------RDRR-GGAFRKLSEQF-ASIKKFSDLLFEEVNWSK 954
Query: 795 LGSFCQNLDTSFDTDLLEKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERKIXXXXX 616
+ F F + EK + N P F HF++ +E I
Sbjct: 955 VRDF------EF-CEAFEKRNFLQNKLSGNPIISTPNFLTHFALAYQEYELESNIDNLSS 1007
Query: 615 XXXXXXXXXXXEYHNRLKVLEALNFVE-QKMVSLKGRIGCEIHH-QELLITELILDYKFH 442
+Y R+KVL+ L +++ ++ V LKGR+ CEI+ EL++TELIL+
Sbjct: 1008 YISDQNLELLPDYEQRIKVLQELGYIDAERTVLLKGRVACEINSTSELVLTELILENSLA 1067
Query: 441 QRSPAELAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRLESVASKHK----SQ 274
S E ALLS + E G+ E + SV ++ + ++ ++
Sbjct: 1068 DFSCEETIALLSAFVFDEKTEVEPTISPHLQKGK--EMILSVAEKVNQIQEHYQVLYFNE 1125
Query: 273 ISDLGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIV 94
+D + RF LMEV YEWA G F +I ++TD EG IV+ I RLDEV ++ R A R+V
Sbjct: 1126 GNDFESQPRFGLMEVCYEWARGMSFNRITDLTDVLEGSIVRTIIRLDEVLRECRGAARVV 1185
Query: 93 GDPALVEKMEEVSASIRRDIVFAASLY 13
GD ++ KMEE IRR+IVF SLY
Sbjct: 1186 GDSSMYTKMEECQNLIRRNIVFCPSLY 1212