Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= F09G2_7
         (1248 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17559460|ref|NP_504825.1| PPAK motif and HMG-I and HMG-Y DNA-...   231   3e-59
gi|39594440|emb|CAE72018.1| Hypothetical protein CBG19100 [Caeno...   194   5e-48
gi|283482|pir||S27777 80K protein (allele C6A) - Babesia bovis         44   0.010
gi|155865|gb|AAA27793.1| 80 kDa protein                                44   0.010
gi|17542856|ref|NP_500057.1| putative nuclear protein (4B983) [C...    44   0.010
gi|32412592|ref|XP_326776.1| hypothetical protein [Neurospora cr...    43   0.018
gi|24653978|ref|NP_725510.1| CG18255-PD [Drosophila melanogaster...    42   0.023
gi|24653966|ref|NP_725506.1| CG18255-PA [Drosophila melanogaster...    42   0.023
gi|9049359|dbj|BAA99394.1| vacuolar calcium binding protein [Rap...    40   0.087
gi|50302543|ref|XP_451207.1| unnamed protein product [Kluyveromy...    40   0.087
gi|50547441|ref|XP_501190.1| hypothetical protein [Yarrowia lipo...    40   0.11
gi|7440063|pir||T09648 nucleolin homolog nuM1 - alfalfa >gnl|BL_...    40   0.11
gi|39583830|emb|CAE74903.1| Hypothetical protein CBG22772 [Caeno...    40   0.15
gi|39979238|emb|CAE85608.1| putative protein [Neurospora crassa]       39   0.19
gi|30681829|ref|NP_850032.1| expressed protein [Arabidopsis thal...    39   0.33
gi|50409715|ref|XP_456900.1| unnamed protein product [Debaryomyc...    38   0.43
gi|46113009|ref|ZP_00182153.2| hypothetical protein Exigu022680 ...    38   0.43
gi|16801898|ref|NP_472166.1| similar to autolysin, N-acetylmuram...    38   0.43
gi|39584549|emb|CAE74627.1| Hypothetical protein CBG22422 [Caeno...    38   0.57
gi|49106150|ref|XP_411399.1| hypothetical protein AN7262.2 [Aspe...    37   0.74
gi|46435696|gb|EAK95072.1| hypothetical protein CaO19.8201 [Cand...    37   0.97
gi|24649873|ref|NP_651318.1| CG13648-PA [Drosophila melanogaster...    37   0.97
gi|47086029|ref|NP_998388.1| zgc:85717 [Danio rerio] >gnl|BL_ORD...    37   0.97
gi|17569309|ref|NP_509731.1| putative protein, with 2 coiled coi...    37   0.97
gi|283483|pir||S27776 80K protein (allele C1B) - Babesia bovis >...    37   0.97
gi|22997354|ref|ZP_00041587.1| COG0532: Translation initiation f...    37   1.3
gi|28198122|ref|NP_778436.1| translation initiation factor IF-2 ...    37   1.3
gi|22994194|ref|ZP_00038708.1| COG0532: Translation initiation f...    37   1.3
gi|7510771|pir||T29919 hypothetical protein ZC449.5 - Caenorhabd...    36   1.6
gi|17570615|ref|NP_508857.1| putative protein (XF654) [Caenorhab...    36   1.6
gi|31206661|ref|XP_312297.1| ENSANGP00000021083 [Anopheles gambi...    36   1.6
gi|46433437|gb|EAK92877.1| hypothetical protein CaO19.8687 [Cand...    36   1.6
gi|22086547|gb|AAM90673.1| surface protein SdrI [Staphylococcus ...    36   1.6
gi|46433464|gb|EAK92903.1| hypothetical protein CaO19.1086 [Cand...    36   1.6
gi|49095082|ref|XP_409002.1| hypothetical protein AN4865.2 [Aspe...    36   1.6
gi|21283053|ref|NP_646141.1| ORFID:MW1324~hypothetical protein, ...    36   2.2
gi|24620454|gb|AAN61518.1| 2MDa_2 protein [Caenorhabditis elegans]     36   2.2
gi|7498955|pir||T34418 hypothetical protein F12F3.3 - Caenorhabd...    36   2.2
gi|13173388|gb|AAK14386.1| lysine/glutamic acid-rich protein [Ca...    36   2.2
gi|24620453|gb|AAN61517.1| 2MDa_1 protein [Caenorhabditis elegans]     36   2.2
gi|32411243|ref|XP_326102.1| hypothetical protein [Neurospora cr...    36   2.2
gi|17559578|ref|NP_504584.1| immunoglobulin-like and fibronectin...    36   2.2
gi|46431840|gb|EAK91364.1| hypothetical protein CaO19.188 [Candi...    35   2.8
gi|42780214|ref|NP_977461.1| hypothetical protein BCE1139 [Bacil...    35   2.8
gi|39594669|emb|CAE72248.1| Hypothetical protein CBG19366 [Caeno...    35   2.8
gi|6321569|ref|NP_011646.1| Protein of unknown function; green f...    35   2.8
gi|47227524|emb|CAG04672.1| unnamed protein product [Tetraodon n...    35   2.8
gi|12847171|dbj|BAB27464.1| unnamed protein product [Mus musculus]     35   2.8
gi|2133786|pir||I51116 NF-180 - sea lamprey >gnl|BL_ORD_ID|32563...    35   2.8
gi|50553422|ref|XP_504122.1| hypothetical protein [Yarrowia lipo...    35   2.8
gi|21700195|dbj|BAC02896.1| tobacco nucleolin [Nicotiana tabacum]      35   2.8
gi|15222009|ref|NP_175322.1| nucleolin, putative [Arabidopsis th...    35   2.8
gi|39595809|emb|CAE67312.1| Hypothetical protein CBG12769 [Caeno...    35   3.7
gi|50418156|gb|AAH78326.1| Unknown (protein for MGC:101056) [Dan...    35   3.7
gi|50590835|ref|ZP_00332180.1| COG1530: Ribonucleases G and E [S...    35   3.7
gi|38102071|gb|EAA48955.1| hypothetical protein MG00613.4 [Magna...    35   4.8
gi|50428710|gb|AAT77061.1| putative FHA domain protein [Oryza sa...    35   4.8
gi|50733004|ref|XP_418866.1| PREDICTED: similar to GLI3 [Gallus ...    35   4.8
gi|23489421|gb|EAA21566.1| CCAAT-box DNA binding protein subunit...    35   4.8
gi|7141288|gb|AAF37273.1| GLI3 [Gallus gallus]                         35   4.8
gi|48098447|ref|XP_392064.1| similar to polo kinase kinase 1 [Ap...    34   6.3
gi|50812234|ref|NP_389598.2| polyketide synthase of type I [Baci...    34   6.3
gi|23475578|ref|ZP_00130863.1| COG0805: Sec-independent protein ...    34   6.3
gi|7460243|pir||A69679 polyketide synthase pksK - Bacillus subti...    34   6.3
gi|50258798|gb|EAL21483.1| hypothetical protein CNBD1770 [Crypto...    34   6.3
gi|48783785|ref|ZP_00280166.1| hypothetical protein Bcep02004678...    34   6.3
gi|6981248|ref|NP_036881.1| nucleolin [Rattus norvegicus] >gnl|B...    34   6.3
gi|34907288|ref|NP_914991.1| contains ESTs AU093915(E1276),AU162...    34   6.3
gi|92559|pir||JH0148 nucleolin - rat                                   34   6.3
gi|50545139|ref|XP_500107.1| hypothetical protein [Yarrowia lipo...    34   6.3
gi|21585695|gb|AAM55492.1| allergenic-related protein Pt2L4 [Man...    34   8.2
gi|117761|sp|P13627|CY1_PARDE Cytochrome c1 precursor >gnl|BL_OR...    34   8.2
gi|46441323|gb|EAL00621.1| hypothetical protein CaO19.2055 [Cand...    34   8.2
gi|17548216|ref|NP_508416.1| putative endoplasmic reticulum prot...    34   8.2
gi|32404182|ref|XP_322704.1| hypothetical protein ( hypothetical...    34   8.2
gi|48098281|ref|XP_392041.1| similar to EIB-55kDa associated pro...    34   8.2
gi|50290873|ref|XP_447869.1| unnamed protein product [Candida gl...    34   8.2


>gi|17559460|ref|NP_504825.1| PPAK motif and HMG-I and HMG-Y
           DNA-binding domain containing protein (44.3 kD) (5H674)
           [Caenorhabditis elegans]
 gi|7498774|pir||T32490 hypothetical protein F09G2.9 -
           Caenorhabditis elegans
 gi|2435616|gb|AAB71317.1| Hypothetical protein F09G2.9
           [Caenorhabditis elegans]
          Length = 415

 Score =  231 bits (588), Expect = 3e-59
 Identities = 122/153 (79%), Positives = 122/153 (79%)
 Frame = -1

Query: 537 NATPXXXXXXXXXXXXXXXAVNPESIAASRPRRSTSNRIDYANSDTSTVLAEVDDEIPGK 358
           NATP               AVNPESIAASRPRRSTSNRIDYANSDTSTVLAEVDDEIPGK
Sbjct: 238 NATPKAAASEKKRAAKPKAAVNPESIAASRPRRSTSNRIDYANSDTSTVLAEVDDEIPGK 297

Query: 357 LFRGRKPPRGKITKYVSDSDGAPSDEDDVDFGKKKKGAXXXXXXXXXXXXXXXXRAAATK 178
           LFRGRKPPRGKITKYVSDSDGAPSDEDDVDFGKKKKGA                RAAATK
Sbjct: 298 LFRGRKPPRGKITKYVSDSDGAPSDEDDVDFGKKKKGAPSTRGRGRPPSSNRPTRAAATK 357

Query: 177 RSAKDASDESNEDEIEYDDKSDEDVSPRKKARG 79
           RSAKDASDESNEDEIEYDDKSDEDVSPRKKARG
Sbjct: 358 RSAKDASDESNEDEIEYDDKSDEDVSPRKKARG 390



 Score =  169 bits (429), Expect = 1e-40
 Identities = 88/88 (100%), Positives = 88/88 (100%)
 Frame = -1

Query: 1248 MSAETATIPEVSNQETKAEKVIADSLEAKKDESAAVEINGSSTHENGDTNIEKKTEEPVV 1069
            MSAETATIPEVSNQETKAEKVIADSLEAKKDESAAVEINGSSTHENGDTNIEKKTEEPVV
Sbjct: 1    MSAETATIPEVSNQETKAEKVIADSLEAKKDESAAVEINGSSTHENGDTNIEKKTEEPVV 60

Query: 1068 EAKVSEEPATTSETPAAQVTESQKDEKT 985
            EAKVSEEPATTSETPAAQVTESQKDEKT
Sbjct: 61   EAKVSEEPATTSETPAAQVTESQKDEKT 88



 Score = 34.3 bits (77), Expect = 6.3
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
 Frame = -1

Query: 1221 EVSNQETKAEKVIADSLEAKKDESAAVEINGSSTHENGDTNIEKKTEEPVVEAKVSEEPA 1042
            EV+ +  K E V+    E KK+++    +      E      EKK+EE VV A+  +EPA
Sbjct: 97   EVAVEAAKEEPVV----EEKKEDAPEPVVTEEKKSEEAPAPEEKKSEE-VVAAEEKKEPA 151

Query: 1041 TT----SETPAAQVTESQKDE 991
                   E P   V E +K+E
Sbjct: 152  AVVEEKKEVPETPVVEDKKEE 172



 Score = 33.9 bits (76), Expect = 8.2
 Identities = 33/87 (37%), Positives = 42/87 (47%), Gaps = 4/87 (4%)
 Frame = -1

Query: 1242 AETATIPEVSNQETKAEKVIADSLEAKKDESAAVEINGSSTHENGDTNIEKKT--EEPVV 1069
            +E A  PE    E K+E+V+A   E KK+ +A VE              EKK   E PVV
Sbjct: 127  SEEAPAPE----EKKSEEVVA--AEEKKEPAAVVE--------------EKKEVPETPVV 166

Query: 1068 EAKVSEEPATTSETPAAQV--TESQKD 994
            E K  E PA++ E     V  TE +KD
Sbjct: 167  EDKKEEAPASSEEKKDEPVVNTEEKKD 193




[DB home][top]