Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F10C1_3
(483 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|32565458|ref|NP_495132.2| cytoplasmic intermediate filament p... 325 2e-88
gi|7447206|pir||T16016 hypothetical protein F10C1.7b - Caenorhab... 300 8e-81
gi|17533059|ref|NP_495133.1| intermediate Filament, B (61.6 kD) ... 258 3e-68
gi|17533061|ref|NP_495134.1| intermediate Filament, B (59.8 kD) ... 257 7e-68
gi|829165|emb|CAA55296.1| cytoplasmic intermediate filament prot... 256 1e-67
gi|39596957|emb|CAE59184.1| Hypothetical protein CBG02493 [Caeno... 225 3e-58
gi|28627982|gb|AAN46118.1| intermediate filament protein HG-IF1 ... 114 1e-24
gi|39596959|emb|CAE59186.1| Hypothetical protein CBG02495 [Caeno... 110 9e-24
gi|17533053|ref|NP_495137.1| intermediate Filament, B, Variable ... 109 2e-23
gi|17533051|ref|NP_495136.1| intermediate Filament, B, Variable ... 109 2e-23
gi|784940|emb|CAA60046.1| cytoplasmic intermediate filament prot... 108 3e-23
gi|7159290|gb|AAF37702.1| intermediate filament protein [Dirofil... 105 4e-22
gi|784941|emb|CAA60047.1| cytoplasmic intermediate filament prot... 103 2e-21
gi|124235|sp|P23731|IFEB_ASCSU Intermediate filament protein B (... 103 2e-21
gi|1078825|pir||S52850 intermediate filament protein A - common ... 102 4e-21
gi|124232|sp|P23730|IFEA_ASCSU Intermediate filament protein A (... 102 4e-21
gi|392788|gb|AAC46974.1| intermediate filament protein 101 7e-21
gi|39594805|emb|CAE70673.1| Hypothetical protein CBG17384 [Caeno... 100 9e-21
gi|1494978|emb|CAA63071.1| intermediate filament protein [Ascari... 100 9e-21
gi|1848063|emb|CAA50182.1| Cytoplasmic intermediate filament (IF... 99 3e-20
gi|25149995|ref|NP_741903.1| intermediate Filament, A (66.5 kD) ... 99 3e-20
gi|25149990|ref|NP_741902.1| intermediate Filament, A (66.5 kD) ... 99 3e-20
gi|7447203|pir||T18872 intermediate filament protein A - Caenorh... 99 3e-20
gi|940941|gb|AAA74283.1| circulating antigen 99 3e-20
gi|17568557|ref|NP_510648.1| intermediate Filament, A (67.1 kD) ... 97 1e-19
gi|39596348|emb|CAE69986.1| Hypothetical protein CBG16385 [Caeno... 97 1e-19
gi|32566480|ref|NP_510649.3| intermediate Filament, A (66.6 kD) ... 96 3e-19
gi|400698|sp|P31732|OV71_ONCVO Muscle cell intermediate filament... 95 6e-19
gi|2497274|sp|Q17107|AV71_ACAVI Muscle cell intermediate filamen... 95 6e-19
gi|556343|gb|AAC41561.1| intermediate filament protein >gnl|BL_O... 94 1e-18
gi|538257|gb|AAA21472.1| intermediate filament protein 94 1e-18
gi|39597973|emb|CAE68665.1| Hypothetical protein CBG14566 [Caeno... 92 3e-18
gi|7447207|pir||T16562 hypothetical protein K05B2.3 - Caenorhabd... 91 9e-18
gi|46576375|sp|P90900|IFA4_CAEEL Intermediate filament protein i... 91 9e-18
gi|23820824|gb|AAF99979.3| Intermediate filament, a protein 4 [C... 91 9e-18
gi|32566482|ref|NP_508836.2| intermediate Filament, A (41.9 kD) ... 91 9e-18
gi|39596347|emb|CAE69985.1| Hypothetical protein CBG16384 [Caeno... 90 2e-17
gi|726492|gb|AAC46633.1| filarin 84 1e-15
gi|784942|emb|CAA60048.1| cytoplasmic intermediate filament prot... 84 1e-15
gi|4761082|gb|AAD29246.1| intermediate filament filarin [Hirudo ... 82 6e-15
gi|4761086|gb|AAD29248.1| intermediate filament gliarin [Hirudo ... 77 1e-13
gi|1078937|pir||S54123 neurofilament protein NF70 - brown garden... 74 2e-12
gi|125963|sp|P11048|LAMA_XENLA Lamin A >gnl|BL_ORD_ID|1116146 gi... 73 2e-12
gi|312738|emb|CAA50178.1| Cytoplasmic intermediate filament (IF)... 73 3e-12
gi|15553083|dbj|BAB64909.1| intermediate filament b [Dugesia jap... 71 1e-11
gi|29420783|dbj|BAC66613.1| intermediate filament protein [Duges... 71 1e-11
gi|4468706|emb|CAB38182.1| intermediate filament protein IF1 [Sa... 70 2e-11
gi|2764976|emb|CAA68255.1| intermediate filament protein [Lineus... 70 2e-11
gi|2764986|emb|CAA69027.1| IF protein [Lineus viridis] 68 6e-11
gi|4761084|gb|AAD29247.1| intermediate filament macrolin [Hirudo... 67 1e-10
gi|10803365|emb|CAC13104.1| nuclear lamin [Branchiostoma lanceol... 64 9e-10
gi|266617|sp|Q01241|NF70_LOLPE 70 kDa neurofilament protein (NF7... 63 2e-09
gi|50417542|gb|AAH77526.1| LOC397912 protein [Xenopus laevis] 63 3e-09
gi|125958|sp|P21910|LAM2_XENLA Lamin L(II) >gnl|BL_ORD_ID|123270... 63 3e-09
gi|29420781|dbj|BAC66612.1| intermediate filament protein [Duges... 63 3e-09
gi|18072745|emb|CAC80098.1| lamin [Branchiostoma lanceolatum] 62 4e-09
gi|9506843|ref|NP_062263.1| lamin A isoform C2; lamin A/C [Mus m... 62 4e-09
gi|50513819|pdb|1UFG|A Chain A, Solution Structure Of Immunoglob... 62 4e-09
gi|1794159|dbj|BAA08569.1| lamin A [Mus musculus domesticus] >gn... 62 4e-09
gi|50355692|ref|NP_001002011.1| lamin A isoform A; lamin A/C [Mu... 62 4e-09
gi|346883|pir||S28182 lamin A - mouse 62 4e-09
gi|1346412|sp|P48678|LAMA_MOUSE Lamin A 62 4e-09
gi|1346414|sp|P11516|LAMC_MOUSE Lamins C and C2 >gnl|BL_ORD_ID|1... 62 4e-09
gi|220474|dbj|BAA02476.1| lamin A [Mus musculus] 62 4e-09
gi|386856|gb|AAA36160.1| lamin A protein 62 6e-09
gi|49115181|gb|AAH73219.1| Lmnb2-A-prov protein [Xenopus laevis] 62 6e-09
gi|3414965|gb|AAC31544.1| lamin B2 [Xenopus laevis] 62 6e-09
gi|5031875|ref|NP_005563.1| lamin A/C isoform 2; 70 kDa lamin; p... 62 6e-09
gi|34228|emb|CAA27173.1| unnamed protein product [Homo sapiens] ... 62 6e-09
gi|39653934|gb|AAR29466.1| progerin [Homo sapiens] 62 6e-09
gi|27436946|ref|NP_733821.1| lamin A/C isoform 1 precursor; 70 k... 62 6e-09
gi|30584609|gb|AAP36557.1| Homo sapiens lamin A/C [synthetic con... 62 6e-09
gi|50355947|ref|NP_001002016.1| lamin A isoform C2; lamin C2 [Ra... 61 8e-09
gi|383110|prf||1902227A lamin A 61 8e-09
gi|1072002|pir||S27267 lamin A - rat 61 8e-09
gi|38303891|gb|AAH62018.1| Unknown (protein for MGC:72422) [Ratt... 61 8e-09
gi|1556433|emb|CAA67641.1| lamin C2 [Rattus norvegicus] 61 8e-09
gi|45384202|ref|NP_990616.1| lamin B2 [Gallus gallus] >gnl|BL_OR... 61 1e-08
gi|45384214|ref|NP_990618.1| lamin A [Gallus gallus] >gnl|BL_ORD... 60 1e-08
gi|7503953|pir||T22507 hypothetical protein F52E10.5 - Caenorhab... 60 1e-08
gi|453180|emb|CAA53945.1| lamin A [Rattus norvegicus] 60 2e-08
gi|1346413|sp|P48679|LAMA_RAT Lamin A 60 2e-08
gi|91032|pir||S04333 lamin C - mouse >gnl|BL_ORD_ID|905825 gi|52... 60 2e-08
gi|4468665|emb|CAB38181.1| cytoplasmic intermediate filament pro... 59 3e-08
gi|14290259|gb|AAK59326.1| lamin Adel10 [Homo sapiens] 59 4e-08
gi|27436948|ref|NP_733822.1| lamin A/C isoform 3; 70 kDa lamin; ... 59 4e-08
gi|10697039|emb|CAC12741.1| intermediate filament protein [Glott... 59 5e-08
gi|18858981|ref|NP_571077.1| lamin b2 [Danio rerio] >gnl|BL_ORD_... 59 5e-08
gi|45384220|ref|NP_990617.1| lamin B1 [Gallus gallus] >gnl|BL_OR... 58 7e-08
gi|3414963|gb|AAC31543.1| lamin B1 [Xenopus laevis] 58 7e-08
gi|4886558|emb|CAB43352.1| lamin [Tealia sp.] 58 9e-08
gi|27371024|gb|AAH41185.1| Lmnb1-prov protein [Xenopus laevis] 58 9e-08
gi|4468655|emb|CAB38180.1| cytoplasmic intermediate filament pro... 57 1e-07
gi|23200154|pdb|1IVT|A Chain A, Nmr Structures Of The C-Terminal... 57 1e-07
gi|998563|gb|AAB34119.1| B-type nuclear lamin [Lytechinus varieg... 57 2e-07
gi|4886531|emb|CAB43347.1| lamin [Priapulus caudatus] 56 3e-07
gi|5031877|ref|NP_005564.1| lamin B1 [Homo sapiens] >gnl|BL_ORD_... 56 3e-07
gi|15126742|gb|AAH12295.1| Lamin B1 [Homo sapiens] 56 3e-07
gi|31240359|ref|XP_320593.1| ENSANGP00000015219 [Anopheles gambi... 56 3e-07
gi|110630|pir||S07720 lamin B - mouse >gnl|BL_ORD_ID|1907340 gi|... 56 3e-07
gi|17865719|sp|P14733|LAM1_MOUSE Lamin B1 >gnl|BL_ORD_ID|1175058... 56 3e-07
gi|6754556|ref|NP_034851.1| lamin B1 [Mus musculus] >gnl|BL_ORD_... 56 3e-07
gi|125955|sp|P09010|LAM1_XENLA Lamin L(I) >gnl|BL_ORD_ID|1629870... 56 3e-07
gi|16758782|ref|NP_446357.1| lamin B1 [Rattus norvegicus] >gnl|B... 55 4e-07
gi|34879507|ref|XP_346513.1| hypothetical protein XP_346512 [Rat... 55 4e-07
gi|85819|pir||S01301 lamin L-III - African clawed frog >gnl|BL_O... 55 4e-07
gi|125959|sp|P10999|LAM3_XENLA Lamin L(III) (Lamin B3) >gnl|BL_O... 55 4e-07
gi|4468777|emb|CAB38186.1| cytoplasmic intermediate filament pro... 55 6e-07
gi|47211071|emb|CAF89686.1| unnamed protein product [Tetraodon n... 55 7e-07
gi|1078922|pir||S51157 intermediate filament protein - earthworm... 54 1e-06
gi|32880115|gb|AAP88888.1| lamin B2 [synthetic construct] 54 1e-06
gi|27436951|ref|NP_116126.2| lamin B2 [Homo sapiens] >gnl|BL_ORD... 54 1e-06
gi|45361241|ref|NP_989198.1| lamin B1 [Xenopus tropicalis] >gnl|... 54 2e-06
gi|23308641|ref|NP_694503.1| lamin A [Danio rerio] >gnl|BL_ORD_I... 53 3e-06
gi|47550983|ref|NP_999665.1| nuclear intermediate filament prote... 53 3e-06
gi|22218770|pdb|1IFR|A Chain A, Structure Of Lamin AC GLOBULAR D... 52 4e-06
gi|50753035|ref|XP_413842.1| PREDICTED: similar to Lamin L(III) ... 52 6e-06
gi|32452113|emb|CAD38130.1| lamin type B [Acipenser baerii] 51 8e-06
gi|46329565|gb|AAH68414.1| Lmnb1 protein [Danio rerio] 51 1e-05
gi|13161386|dbj|BAB32979.1| lamin B1 [Carassius auratus] 50 2e-05
gi|6065833|emb|CAB58234.1| lamin B1 protein [Danio rerio] 50 2e-05
gi|40254675|ref|NP_694504.2| lamin B1 [Danio rerio] >gnl|BL_ORD_... 49 3e-05
gi|17136290|ref|NP_476616.1| CG6944-PA [Drosophila melanogaster]... 49 5e-05
gi|1346410|sp|P08928|LAM0_DROME Lamin Dm0 >gnl|BL_ORD_ID|745581 ... 49 5e-05
gi|280616|pir||A37103 lamin precursor - fruit fly (Drosophila me... 49 5e-05
gi|85042|pir||A29965 lamin Dm-0 precursor - fruit fly (Drosophil... 49 5e-05
gi|47213920|emb|CAF90743.1| unnamed protein product [Tetraodon n... 48 9e-05
gi|4886294|emb|CAB43342.1| Lamin [Astropecten brasiliensis] 47 1e-04
gi|630809|pir||S43427 intermediate filament protein - Sloane's s... 47 2e-04
gi|39596884|emb|CAE59111.1| Hypothetical protein CBG02406 [Caeno... 45 6e-04
gi|16660147|gb|AAL27546.1| nuclear lamin LIII [Danio rerio] 45 6e-04
gi|39596956|emb|CAE59183.1| Hypothetical protein CBG02492 [Caeno... 45 8e-04
gi|42476244|ref|NP_694505.2| lamin L3; lamin LIII [Danio rerio] ... 44 0.001
gi|13161382|dbj|BAB32977.1| lamin B3 [Carassius auratus] 42 0.004
gi|729915|sp|Q03427|LAMC_DROME Lamin C (PG-IF) >gnl|BL_ORD_ID|22... 39 0.054
gi|39586648|emb|CAE69368.1| Hypothetical protein CBG15464 [Caeno... 38 0.071
gi|24653664|ref|NP_523742.2| CG10119-PA [Drosophila melanogaster... 38 0.071
gi|1079110|pir||S49020 nuclear lamin C protein - fruit fly (Dros... 38 0.071
gi|47213126|emb|CAF96621.1| unnamed protein product [Tetraodon n... 37 0.16
gi|12833675|dbj|BAB22619.1| unnamed protein product [Mus musculus] 35 0.46
gi|630812|pir||S43428 omega-crystallin - giant octopus >gnl|BL_O... 34 1.0
gi|4803826|dbj|BAA77551.1| VP4 [Human rotavirus G3] 34 1.3
gi|32565460|ref|NP_872034.1| putative protein (2G43) [Caenorhabd... 34 1.3
gi|21213877|emb|CAD13471.1| cytoplasmic intermediate filament pr... 33 3.0
gi|9507157|ref|NP_062021.1| striatin [Rattus norvegicus] >gnl|BL... 32 6.6
gi|48893266|ref|ZP_00326535.1| COG2124: Cytochrome P450 [Trichod... 31 8.7
gi|50877016|emb|CAG36856.1| unknown protein [Desulfotalea psychr... 31 8.7
>gi|32565458|ref|NP_495132.2| cytoplasmic intermediate filament
protein family member (18.0 kD) (2G43) [Caenorhabditis
elegans]
gi|24418265|gb|AAN60518.1| Hypothetical protein F10C1.8a
[Caenorhabditis elegans]
Length = 160
Score = 325 bits (834), Expect = 2e-88
Identities = 160/160 (100%), Positives = 160/160 (100%)
Frame = +1
Query: 1 MQSRTIIPNSNGRTRLVPVEQDHWDSGEVQTRSSFKRHAKGNVSIVECDPQGKYIILENT 180
MQSRTIIPNSNGRTRLVPVEQDHWDSGEVQTRSSFKRHAKGNVSIVECDPQGKYIILENT
Sbjct: 1 MQSRTIIPNSNGRTRLVPVEQDHWDSGEVQTRSSFKRHAKGNVSIVECDPQGKYIILENT 60
Query: 181 SGSVAEDVSNFEIRRVIDGVQAFVFRLPSHLVIQQHGHLKIYGRNAGEINLTPDSIVMES 360
SGSVAEDVSNFEIRRVIDGVQAFVFRLPSHLVIQQHGHLKIYGRNAGEINLTPDSIVMES
Sbjct: 61 SGSVAEDVSNFEIRRVIDGVQAFVFRLPSHLVIQQHGHLKIYGRNAGEINLTPDSIVMES 120
Query: 361 HASWGQGRQAETFLYNSHGIEKASHILIDRFLQLLHPSSN 480
HASWGQGRQAETFLYNSHGIEKASHILIDRFLQLLHPSSN
Sbjct: 121 HASWGQGRQAETFLYNSHGIEKASHILIDRFLQLLHPSSN 160