Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= F17C8_3
         (2922 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17553072|ref|NP_497971.1| putative protein family member, wit...  1764   0.0
gi|33668508|emb|CAA84799.2| Hypothetical protein F17C8.3 [Caenor...  1235   0.0
gi|33589131|emb|CAE45044.1| Hypothetical protein F17C8.7 [Caenor...   534   e-150
gi|39591568|emb|CAE71144.1| Hypothetical protein CBG17999 [Caeno...   515   e-144
gi|17555236|ref|NP_497950.1| putative protein family member (3F7...   452   e-125
gi|17554516|ref|NP_497889.1| putative protein family member (28....   447   e-124
gi|17554552|ref|NP_497798.1| putative protein (28.6 kD) (3F52) [...   357   1e-96
gi|39591567|emb|CAE71143.1| Hypothetical protein CBG17998 [Caeno...   353   1e-95
gi|39583315|emb|CAE60107.1| Hypothetical protein CBG03643 [Caeno...   347   9e-94
gi|630734|pir||S43597 coiled-coil protein homolog R07E5.6 - Caen...   332   4e-89
gi|21312002|ref|NP_080966.1| RIKEN cDNA 0610012D14 [Mus musculus...   197   2e-48
gi|18043455|gb|AAH19451.1| RIKEN cDNA 0610012D14 [Mus musculus]       197   2e-48
gi|34856022|ref|XP_214919.2| similar to RIKEN cDNA 0610012D14 [R...   196   3e-48
gi|27485319|ref|XP_209145.1| similar to RIKEN cDNA 0610012D14 [H...   193   2e-47
gi|42490927|gb|AAH66359.1| Unknown (protein for MGC:87699) [Homo...   116   4e-24
gi|41719115|ref|ZP_00148039.1| COG1712: Predicted dinucleotide-u...    91   2e-16
gi|50807808|ref|XP_428932.1| PREDICTED: similar to RIKEN cDNA 06...    77   3e-12
gi|15644391|ref|NP_229443.1| conserved hypothetical protein [The...    72   8e-11
gi|22218813|pdb|1J5P|A Chain A, Crystal Structure Of Conserved H...    72   8e-11
gi|11499423|ref|NP_070664.1| conserved hypothetical protein [Arc...    70   2e-10
gi|23200126|pdb|1H2H|A Chain A, Crystal Structure Of Tm1643            69   6e-10
gi|21228174|ref|NP_634096.1| putative dinucleotide-utilizing enz...    64   3e-08
gi|20089836|ref|NP_615911.1| conserved hypothetical protein [Met...    62   8e-08
gi|48839859|ref|ZP_00296788.1| COG1712: Predicted dinucleotide-u...    59   7e-07
gi|33591770|ref|NP_879414.1| conserved hypothetical protein [Bor...    58   1e-06
gi|15598701|ref|NP_252195.1| hypothetical protein [Pseudomonas a...    57   3e-06
gi|33599249|ref|NP_886809.1| conserved hypothetical protein [Bor...    56   6e-06
gi|33594973|ref|NP_882616.1| conserved hypothetical protein [Bor...    55   1e-05
gi|45681166|ref|ZP_00192609.1| COG1712: Predicted dinucleotide-u...    55   1e-05
gi|45358300|ref|NP_987857.1| Protein of unknown function DUF108 ...    53   4e-05
gi|17548943|ref|NP_522283.1| CONSERVED HYPOTHETICAL PROTEIN [Ral...    52   8e-05
gi|15678991|ref|NP_276108.1| conserved protein [Methanothermobac...    52   1e-04
gi|48789092|ref|ZP_00285071.1| COG1712: Predicted dinucleotide-u...    52   1e-04
gi|15669105|ref|NP_247910.1| conserved hypothetical protein [Met...    49   5e-04
gi|20093534|ref|NP_613381.1| Predicted dinucleotide-utilizing en...    49   7e-04
gi|33603754|ref|NP_891314.1| conserved hypothetical protein [Bor...    47   0.003
gi|33596898|ref|NP_884541.1| putative exported protein [Bordetel...    44   0.029
gi|33600732|ref|NP_888292.1| putative exported protein [Bordetel...    43   0.038
gi|21388670|dbj|BAC00793.1| orf3 [Rhodococcus sp. YK2]                 42   0.065
gi|46312759|ref|ZP_00213353.1| COG1712: Predicted dinucleotide-u...    42   0.085
gi|33592964|ref|NP_880608.1| putative exported protein [Bordetel...    42   0.085
gi|50084200|ref|YP_045710.1| conserved hypothetical protein; put...    40   0.42
gi|18313833|ref|NP_560500.1| nicotinate-nucleotide pyrophosphory...    39   0.55
gi|34763264|ref|ZP_00144224.1| Precorrin-3B C17-methyltransferas...    37   2.7
gi|45120568|gb|AAO64656.2| RNA polymerase II subunit RPB2 [Echin...    37   2.7
gi|15605639|ref|NP_213014.1| 3-hydroxyisobutyrate dehydrogenase ...    36   4.7
gi|24648603|ref|NP_650936.1| CG7079-PA [Drosophila melanogaster]...    36   4.7
gi|34392565|dbj|BAC82612.1| gag-like protein [Danio rerio]             35   8.0
gi|45358147|ref|NP_987704.1| Valyl-tRNA synthetase [Methanococcu...    35   8.0
gi|13186350|gb|AAK15389.1| tryptophanyl-tRNA synthetase [Candida...    35   8.0


>gi|17553072|ref|NP_497971.1| putative protein family member, with a
            coiled coil-4 domain, of ancient origin (3F825)
            [Caenorhabditis elegans]
 gi|7499317|pir||T21069 hypothetical protein F17C8.3 - Caenorhabditis
            elegans
          Length = 973

 Score = 1764 bits (4569), Expect = 0.0
 Identities = 889/973 (91%), Positives = 889/973 (91%)
 Frame = +1

Query: 1    MSAASEAVSGALFQHLFRIFSLFADQNEKGTFKPAQAEFLIDELLRELRRQTTPKVHDLP 180
            MSAASEAVSGALFQHLFRIFSLFADQNEKGTFKPAQAEFLIDELLRELRRQTTPKVHDLP
Sbjct: 1    MSAASEAVSGALFQHLFRIFSLFADQNEKGTFKPAQAEFLIDELLRELRRQTTPKVHDLP 60

Query: 181  ENVTFNEFLNLLQVIFPDREDLLIATNRVFERYVNHVIGKGFVLFRKLSQKRGCLPFKRR 360
            ENVTFNEFLNLLQVIFPDREDLLIATNRVFERYVNHVIGKGFVLFRKLSQKRGCLPFKRR
Sbjct: 61   ENVTFNEFLNLLQVIFPDREDLLIATNRVFERYVNHVIGKGFVLFRKLSQKRGCLPFKRR 120

Query: 361  TEDWQFGWLQVLPGVAEIRKQNSDIDDIIQFDEDTVIEPPVIDEDASVWSVICNSTTAFQ 540
            TEDWQFGWLQVLPGVAEIRKQNSDIDDIIQFDEDTVIEPPVIDEDASVWSVICNSTTAFQ
Sbjct: 121  TEDWQFGWLQVLPGVAEIRKQNSDIDDIIQFDEDTVIEPPVIDEDASVWSVICNSTTAFQ 180

Query: 541  FSHLDPIMAQLFVKGFLTYWKLNLKYFFSDMRSARDFPTREELAVFDYKRSLKSRPTKEG 720
            FSHLDPIMAQLFVKGFLTYWKLNLKYFFSDMRSARDFPTREELAVFDYKRSLKSRPTKEG
Sbjct: 181  FSHLDPIMAQLFVKGFLTYWKLNLKYFFSDMRSARDFPTREELAVFDYKRSLKSRPTKEG 240

Query: 721  KSRKXXXXXXXXXXXXXXXXXXXXXDEEIVRGLTTRLLXXXXXXXXXXXXVIYELRSKLD 900
            KSRK                     DEEIVRGLTTRLL            VIYELRSKLD
Sbjct: 241  KSRKELETERCRLESELEEEKKNRKDEEIVRGLTTRLLKQEMEKSEQMQQVIYELRSKLD 300

Query: 901  NGENEAGXXXXXXXXXXXXXXXXXXXXGENEEISITLPSREEKIQQYAYHLYATQAEEHV 1080
            NGENEAG                    GENEEISITLPSREEKIQQYAYHLYATQAEEHV
Sbjct: 301  NGENEAGVDDEDIVDVEMIEDEISEDVGENEEISITLPSREEKIQQYAYHLYATQAEEHV 360

Query: 1081 TSDDEEIWKQNYNLIVSTHFTDTMWKSCKPIVYCSEIVSQIVNQSPFIFLINLNNDLHNR 1260
            TSDDEEIWKQNYNLIVSTHFTDTMWKSCKPIVYCSEIVSQIVNQSPFIFLINLNNDLHNR
Sbjct: 361  TSDDEEIWKQNYNLIVSTHFTDTMWKSCKPIVYCSEIVSQIVNQSPFIFLINLNNDLHNR 420

Query: 1261 ATLGLTTYLVSYRFPCSFFLIELKMTKLRVGFIGYGHLGKFLVEKLRLLPEEFEIVKIWN 1440
            ATLGLTTYLVSYRFPCSFFLIELKMTKLRVGFIGYGHLGKFLVEKLRLLPEEFEIVKIWN
Sbjct: 421  ATLGLTTYLVSYRFPCSFFLIELKMTKLRVGFIGYGHLGKFLVEKLRLLPEEFEIVKIWN 480

Query: 1441 RSVGEPGVQGLETLTAENLKDIDLVVEVAHPKIIADYGELILEHCDLFAGSPTCFANQXX 1620
            RSVGEPGVQGLETLTAENLKDIDLVVEVAHPKIIADYGELILEHCDLFAGSPTCFANQ
Sbjct: 481  RSVGEPGVQGLETLTAENLKDIDLVVEVAHPKIIADYGELILEHCDLFAGSPTCFANQEL 540

Query: 1621 XXXXXXXXXXHGKKLLIPAGALWGANDIQKMADVGSLKGLTVTMIKHPTSFKLGSPLFEI 1800
                      HGKKLLIPAGALWGANDIQKMADVGSLKGLTVTMIKHPTSFKLGSPLFEI
Sbjct: 541  LEKLTKLSLSHGKKLLIPAGALWGANDIQKMADVGSLKGLTVTMIKHPTSFKLGSPLFEI 600

Query: 1801 NEKAKLEETNETVLYEGSVRGLCPLAPNNVNTMAGGALAASNLGFDEVKAKLISDPKMTD 1980
            NEKAKLEETNETVLYEGSVRGLCPLAPNNVNTMAGGALAASNLGFDEVKAKLISDPKMTD
Sbjct: 601  NEKAKLEETNETVLYEGSVRGLCPLAPNNVNTMAGGALAASNLGFDEVKAKLISDPKMTD 660

Query: 1981 WHVVEVRVEGDDGFEVITRRNNPAKPGAVTEISVLKSVILDFSNLKTNSDCPFFCSSTNK 2160
            WHVVEVRVEGDDGFEVITRRNNPAKPGAVTEISVLKSVILDFSNLKTNSDCPFFCSSTNK
Sbjct: 661  WHVVEVRVEGDDGFEVITRRNNPAKPGAVTEISVLKSVILDFSNLKTNSDCPFFCSSTNK 720

Query: 2161 MPCQTKSNPTELHISTGREIVQRNFVFRNTTGKDFLLKLYATNEAVTFLTEVFRFPPLAH 2340
            MPCQTKSNPTELHISTGREIVQRNFVFRNTTGKDFLLKLYATNEAVTFLTEVFRFPPLAH
Sbjct: 721  MPCQTKSNPTELHISTGREIVQRNFVFRNTTGKDFLLKLYATNEAVTFLTEVFRFPPLAH 780

Query: 2341 RAIQFRVNSSKLSQWDKMNLSIKGYVLPIYAKSLKQFIDQKKTAGNKEQETFSLSVKFTD 2520
            RAIQFRVNSSKLSQWDKMNLSIKGYVLPIYAKSLKQFIDQKKTAGNKEQETFSLSVKFTD
Sbjct: 781  RAIQFRVNSSKLSQWDKMNLSIKGYVLPIYAKSLKQFIDQKKTAGNKEQETFSLSVKFTD 840

Query: 2521 QFSAPQTVINLPGCATCIESTDHPVDVEELDTTTAVNIERDVSTAVPIGSMMGFVEEYKR 2700
            QFSAPQTVINLPGCATCIESTDHPVDVEELDTTTAVNIERDVSTAVPIGSMMGFVEEYKR
Sbjct: 841  QFSAPQTVINLPGCATCIESTDHPVDVEELDTTTAVNIERDVSTAVPIGSMMGFVEEYKR 900

Query: 2701 RQLNKGCWLSNYICGTEKQPEKQXXXXXXXXXXXXXXXXXXXKACRIQANKKNKSDVNVC 2880
            RQLNKGCWLSNYICGTEKQPEKQ                   KACRIQANKKNKSDVNVC
Sbjct: 901  RQLNKGCWLSNYICGTEKQPEKQSMRSSRRSSRSSNHSAKSSKACRIQANKKNKSDVNVC 960

Query: 2881 LEATPCGGSTIQA 2919
            LEATPCGGSTIQA
Sbjct: 961  LEATPCGGSTIQA 973


>gi|33668508|emb|CAA84799.2| Hypothetical protein F17C8.3
            [Caenorhabditis elegans]
          Length = 715

 Score = 1235 bits (3196), Expect = 0.0
 Identities = 625/690 (90%), Positives = 625/690 (90%)
 Frame = +1

Query: 1    MSAASEAVSGALFQHLFRIFSLFADQNEKGTFKPAQAEFLIDELLRELRRQTTPKVHDLP 180
            MSAASEAVSGALFQHLFRIFSLFADQNEKGTFKPAQAEFLIDELLRELRRQTTPKVHDLP
Sbjct: 1    MSAASEAVSGALFQHLFRIFSLFADQNEKGTFKPAQAEFLIDELLRELRRQTTPKVHDLP 60

Query: 181  ENVTFNEFLNLLQVIFPDREDLLIATNRVFERYVNHVIGKGFVLFRKLSQKRGCLPFKRR 360
            ENVTFNEFLNLLQVIFPDREDLLIATNRVFERYVNHVIGKGFVLFRKLSQKRGCLPFKRR
Sbjct: 61   ENVTFNEFLNLLQVIFPDREDLLIATNRVFERYVNHVIGKGFVLFRKLSQKRGCLPFKRR 120

Query: 361  TEDWQFGWLQVLPGVAEIRKQNSDIDDIIQFDEDTVIEPPVIDEDASVWSVICNSTTAFQ 540
            TEDWQFGWLQVLPGVAEIRKQNSDIDDIIQFDEDTVIEPPVIDEDASVWSVICNSTTAFQ
Sbjct: 121  TEDWQFGWLQVLPGVAEIRKQNSDIDDIIQFDEDTVIEPPVIDEDASVWSVICNSTTAFQ 180

Query: 541  FSHLDPIMAQLFVKGFLTYWKLNLKYFFSDMRSARDFPTREELAVFDYKRSLKSRPTKEG 720
            FSHLDPIMAQLFVKGFLTYWKLNLKYFFSDMRSARDFPTREELAVFDYKRSLKSRPTKEG
Sbjct: 181  FSHLDPIMAQLFVKGFLTYWKLNLKYFFSDMRSARDFPTREELAVFDYKRSLKSRPTKEG 240

Query: 721  KSRKXXXXXXXXXXXXXXXXXXXXXDEEIVRGLTTRLLXXXXXXXXXXXXVIYELRSKLD 900
            KSRK                     DEEIVRGLTTRLL            VIYELRSKLD
Sbjct: 241  KSRKELETERCRLESELEEEKKNRKDEEIVRGLTTRLLKQEMEKSEQMQQVIYELRSKLD 300

Query: 901  NGENEAGXXXXXXXXXXXXXXXXXXXXGENEEISITLPSREEKIQQYAYHLYATQAEEHV 1080
            NGENEAG                    GENEEISITLPSREEKIQQYAYHLYATQAEEHV
Sbjct: 301  NGENEAGVDDEDIVDVEMIEDEISEDVGENEEISITLPSREEKIQQYAYHLYATQAEEHV 360

Query: 1081 TSDDEEIWKQNYNLIVSTHFTDTMWKSCKPIVYCSEIVSQIVNQSPFIFLINLNNDLHNR 1260
            TSDDEEIWKQNYNLIVSTHFTDTMWKSCKPIVYCSEIVSQIVNQSPFIFLINLNNDLHNR
Sbjct: 361  TSDDEEIWKQNYNLIVSTHFTDTMWKSCKPIVYCSEIVSQIVNQSPFIFLINLNNDLHNR 420

Query: 1261 ATLGLTTYLVSYRFPCSFFLIELKMTKLRVGFIGYGHLGKFLVEKLRLLPEEFEIVKIWN 1440
            ATLGLTTYLVSYRFPCSFFLIELKMTKLRVGFIGYGHLGKFLVEKLRLLPEEFEIVKIWN
Sbjct: 421  ATLGLTTYLVSYRFPCSFFLIELKMTKLRVGFIGYGHLGKFLVEKLRLLPEEFEIVKIWN 480

Query: 1441 RSVGEPGVQGLETLTAENLKDIDLVVEVAHPKIIADYGELILEHCDLFAGSPTCFANQXX 1620
            RSVGEPGVQGLETLTAENLKDIDLVVEVAHPKIIADYGELILEHCDLFAGSPTCFANQ
Sbjct: 481  RSVGEPGVQGLETLTAENLKDIDLVVEVAHPKIIADYGELILEHCDLFAGSPTCFANQEL 540

Query: 1621 XXXXXXXXXXHGKKLLIPAGALWGANDIQKMADVGSLKGLTVTMIKHPTSFKLGSPLFEI 1800
                      HGKKLLIPAGALWGANDIQKMADVGSLKGLTVTMIKHPTSFKLGSPLFEI
Sbjct: 541  LEKLTKLSLSHGKKLLIPAGALWGANDIQKMADVGSLKGLTVTMIKHPTSFKLGSPLFEI 600

Query: 1801 NEKAKLEETNETVLYEGSVRGLCPLAPNNVNTMAGGALAASNLGFDEVKAKLISDPKMTD 1980
            NEKAKLEETNETVLYEGSVRGLCPLAPNNVNTMAGGALAASNLGFDEVKAKLISDPKMTD
Sbjct: 601  NEKAKLEETNETVLYEGSVRGLCPLAPNNVNTMAGGALAASNLGFDEVKAKLISDPKMTD 660

Query: 1981 WHVVEVRVEGDDGFEVITRRNNPAKPGAVT 2070
            WHVVEVRVEGDDGFEVITRRNNPAKPGAVT
Sbjct: 661  WHVVEVRVEGDDGFEVITRRNNPAKPGAVT 690




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