Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F21D12_4
(1341 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|14574111|gb|AAD31548.2| Nuclear hormone receptor family prote... 833 0.0
gi|4139092|gb|AAD03691.1| nuclear receptor NHR-21a [Caenorhabdit... 833 0.0
gi|32563894|ref|NP_495534.3| nuclear Hormone Receptor (nhr-21) [... 833 0.0
gi|28275159|gb|AAO38653.1| Nuclear hormone receptor family prote... 827 0.0
gi|25396656|pir||D88206 protein nhr-21.a [imported] - Caenorhabd... 818 0.0
gi|28275161|gb|AAO38655.1| Nuclear hormone receptor family prote... 811 0.0
gi|39582349|emb|CAE67598.1| Hypothetical protein CBG13142 [Caeno... 706 0.0
gi|32563896|ref|NP_495535.2| nuclear Hormone Receptor (44.9 kD) ... 667 0.0
gi|10198051|gb|AAG15160.1| nuclear receptor NHR-61 [Caenorhabdit... 314 3e-84
gi|17535329|ref|NP_497074.1| nuclear Hormone Receptor (46.5 kD) ... 314 3e-84
gi|17535327|ref|NP_497073.1| nuclear Hormone Receptor (46.9 kD) ... 312 1e-83
gi|10198047|gb|AAG15158.1| nuclear receptor NHR-61 [Caenorhabdit... 312 1e-83
gi|39595242|emb|CAE60279.1| Hypothetical protein CBG03860 [Caeno... 270 6e-71
gi|10198057|gb|AAG15163.1| nuclear receptor NHR-62 [Caenorhabdit... 268 2e-70
gi|10198055|gb|AAG15162.1| nuclear receptor NHR-62 [Caenorhabdit... 268 2e-70
gi|17508461|ref|NP_492607.1| nuclear Hormone Receptor (58.1 kD) ... 268 2e-70
gi|17565830|ref|NP_504215.1| nuclear receptor NHR-61 (5E887) [Ca... 266 1e-69
gi|7510381|pir||T23558 hypothetical protein Y67A6A.2 - Caenorhab... 264 3e-69
gi|39585773|emb|CAE59975.1| Hypothetical protein CBG03466 [Caeno... 202 2e-50
gi|39583063|emb|CAE60603.1| Hypothetical protein CBG04240 [Caeno... 187 6e-46
gi|10198053|gb|AAG15161.1| nuclear receptor NHR-61 [Caenorhabdit... 172 2e-41
gi|34555806|emb|CAC70099.2| Hypothetical protein F58G6.5b [Caeno... 159 2e-37
gi|34555807|emb|CAE46673.1| Hypothetical protein F58G6.5c [Caeno... 159 2e-37
gi|10197989|gb|AAG15129.1| nuclear receptor NHR-34 [Caenorhabdit... 157 7e-37
gi|25153807|ref|NP_741480.1| nuclear Hormone Receptor (nhr-34) [... 156 9e-37
gi|39582376|emb|CAE74760.1| Hypothetical protein CBG22587 [Caeno... 155 2e-36
gi|7504684|pir||T22948 hypothetical protein F58G6.5 - Caenorhabd... 144 6e-33
gi|39598310|emb|CAE69003.1| Hypothetical protein CBG14996 [Caeno... 144 6e-33
gi|17541658|ref|NP_501775.1| nuclear Hormone Receptor (55.5 kD) ... 126 1e-27
gi|7500322|pir||T21645 hypothetical protein F32B6.1 - Caenorhabd... 126 1e-27
gi|39583834|emb|CAE74907.1| Hypothetical protein CBG22776 [Caeno... 117 8e-25
gi|25150309|ref|NP_741861.1| nuclear Hormone Receptor (nhr-14) [... 116 1e-24
gi|44888978|sp|O02151|NH14_CAEEL Nuclear hormone receptor family... 116 1e-24
gi|25513780|pir||H89591 protein T01B10.4 [imported] - Caenorhabd... 116 1e-24
gi|25150304|ref|NP_741860.1| nuclear Hormone Receptor (nhr-14) [... 116 1e-24
gi|30025114|gb|AAP13776.1| Nuclear hormone receptor family prote... 116 1e-24
gi|35902797|ref|NP_919349.1| hepatocyte nuclear factor 4, alpha ... 115 2e-24
gi|34194038|gb|AAH56550.1| Hnf4a protein [Danio rerio] 115 2e-24
gi|39596578|emb|CAE63197.1| Hypothetical protein CBG07552 [Caeno... 115 2e-24
gi|17568425|ref|NP_510423.1| nuclear Hormone Receptor (51.3 kD) ... 115 2e-24
gi|32454391|gb|AAP82997.1| hepatocyte nuclear factor 4alpha [Bos... 115 3e-24
gi|2734852|gb|AAB93763.1| hepatocyte nuclear factor 4 isoform b 114 4e-24
gi|50758697|ref|XP_417376.1| PREDICTED: similar to hepatocyte nu... 114 4e-24
gi|6016234|sp|P79926|HN4B_XENLA Hepatocyte nuclear factor 4-beta... 114 4e-24
gi|27503338|gb|AAH42224.1| Hnf4-prov protein [Xenopus laevis] 114 5e-24
gi|6016233|sp|Q91766|HN4A_XENLA Hepatocyte nuclear factor 4-alph... 114 5e-24
gi|47229086|emb|CAG03838.1| unnamed protein product [Tetraodon n... 114 5e-24
gi|46575916|ref|NP_032287.2| hepatic nuclear factor 4; HNF4 alph... 114 7e-24
gi|11559939|ref|NP_071516.1| hepatocyte nuclear factor 4 alpha; ... 114 7e-24
gi|1346306|sp|P49698|HN4A_MOUSE Hepatocyte nuclear factor 4-alph... 114 7e-24
gi|112415|pir||A36471 transcription factor HNF-4 - rat >gnl|BL_O... 114 7e-24
gi|227511|prf||1705219A hepatocyte nuclear factor 4 114 7e-24
gi|31077205|ref|NP_000448.3| hepatocyte nuclear factor 4 alpha i... 113 9e-24
gi|2135342|pir||JC4938 hepatocyte nuclear factor 4C - human >gnl... 113 9e-24
gi|6166208|sp|P41235|HN4A_HUMAN Hepatocyte nuclear factor 4-alph... 113 9e-24
gi|2135341|pir||JC4937 hepatocyte nuclear factor 4, splice form ... 113 9e-24
gi|575253|emb|CAA54248.1| hepatocyte nuclear factor 4 [Homo sapi... 113 9e-24
gi|31077209|ref|NP_849181.1| hepatocyte nuclear factor 4 alpha i... 113 9e-24
gi|31077207|ref|NP_849180.1| hepatocyte nuclear factor 4 alpha i... 113 9e-24
gi|1595752|emb|CAA61133.1| Hepatocyte nuclear factor 4A [Homo sa... 113 9e-24
gi|2734850|gb|AAB93762.1| hepatocyte nuclear factor 4 isoform a 113 1e-23
gi|9453875|dbj|BAB03286.1| hepatocyte nuclear factor 4 [Tamias s... 113 1e-23
gi|39588306|emb|CAE72657.1| Hypothetical protein CBG19870 [Caeno... 112 2e-23
gi|1843522|gb|AAB48082.1| hepatocyte nuclear factor 4-alpha [Hom... 112 2e-23
gi|7446193|pir||JC6096 hepatocyte nuclear factor 4 alpha2 chain ... 112 2e-23
gi|47223458|emb|CAF97945.1| unnamed protein product [Tetraodon n... 112 3e-23
gi|10720045|sp|Q9WUU6|HN4G_MOUSE Hepatocyte nuclear factor 4-gam... 110 6e-23
gi|7305147|ref|NP_038948.1| hepatocyte nuclear factor 4, gamma [... 110 6e-23
gi|45430043|ref|NP_991380.1| hepatocyte nuclear factor 4gamma [B... 110 1e-22
gi|49457135|emb|CAG46888.1| HNF4G [Homo sapiens] 109 1e-22
gi|27669076|gb|AAO21381.1| Nuclear hormone receptor family prote... 108 2e-22
gi|39752847|gb|AAR30203.1| Nuclear hormone receptor family prote... 108 2e-22
gi|10198089|gb|AAG15179.1| nuclear receptor NHR-88 [Caenorhabdit... 108 2e-22
gi|39584683|emb|CAE72436.1| Hypothetical protein CBG19603 [Caeno... 108 2e-22
gi|24582909|ref|NP_723413.1| CG9310-PB [Drosophila melanogaster]... 108 2e-22
gi|40254475|ref|NP_004124.3| hepatocyte nuclear factor 4, gamma ... 108 2e-22
gi|24582907|ref|NP_476887.2| CG9310-PA [Drosophila melanogaster]... 108 2e-22
gi|7446194|pir||JC6095 hepatocyte nuclear factor 4 gamma chain -... 108 2e-22
gi|32563886|ref|NP_494413.2| nuclear Hormone Receptor (64.1 kD) ... 108 2e-22
gi|24582911|ref|NP_723414.1| CG9310-PC [Drosophila melanogaster]... 108 2e-22
gi|480042|pir||S36218 hepatocyte nuclear factor 4 - fruit fly (D... 108 2e-22
gi|5834598|emb|CAA89990.2| hepatocyte nuclear factor 4 gamma (HN... 108 4e-22
gi|12644415|sp|Q14541|HN4G_HUMAN Hepatocyte nuclear factor 4-gam... 108 4e-22
gi|45387535|ref|NP_991109.1| Unknown (protein for MGC:77387); wu... 107 8e-22
gi|32566294|ref|NP_508779.3| nuclear Hormone Receptor (54.7 kD) ... 106 1e-21
gi|10197991|gb|AAG15130.1| nuclear receptor NHR-35 [Caenorhabdit... 106 1e-21
gi|45645185|sp|Q17771|NH35_CAEEL Nuclear hormone receptor family... 106 1e-21
gi|39595537|emb|CAE60575.1| Hypothetical protein CBG04204 [Caeno... 106 1e-21
gi|28396028|gb|AAO39177.1| nuclear receptor NHR-64 [Caenorhabdit... 106 1e-21
gi|17508463|ref|NP_491103.1| nuclear Hormone Receptor (nhr-64) [... 106 1e-21
gi|3608380|gb|AAC72724.1| nuclear transcription factor 4 homolog... 105 3e-21
gi|3608378|gb|AAC72723.1| nuclear transcription factor 4 homolog... 105 3e-21
gi|25012937|gb|AAN71555.1| RH29074p [Drosophila melanogaster] 104 4e-21
gi|50731740|ref|XP_425924.1| PREDICTED: similar to hepatocyte nu... 104 5e-21
gi|39597700|emb|CAE68391.1| Hypothetical protein CBG14155 [Caeno... 103 9e-21
gi|39595232|emb|CAE60269.1| Hypothetical protein CBG03848 [Caeno... 103 9e-21
gi|7508351|pir||T25211 hypothetical protein T23H4.2 - Caenorhabd... 102 2e-20
gi|48139397|ref|XP_396999.1| similar to photoreceptor-specific n... 102 2e-20
gi|32563633|ref|NP_492615.2| nuclear Hormone Receptor (nhr-69) [... 102 2e-20
gi|17559592|ref|NP_504213.1| nuclear Hormone Receptor (nhr-118) ... 102 2e-20
gi|47077588|dbj|BAD18677.1| unnamed protein product [Homo sapiens] 102 3e-20
gi|47224633|emb|CAG03617.1| unnamed protein product [Tetraodon n... 102 3e-20
gi|28396018|gb|AAO39172.1| nuclear receptor NHR-10 [Caenorhabdit... 102 3e-20
gi|17554350|ref|NP_498554.1| nuclear Hormone Receptor (44.9 kD) ... 102 3e-20
gi|21538834|gb|AAM61763.1| nuclear receptor 2E1 [Takifugu rubripes] 102 3e-20
gi|50418146|gb|AAH77146.1| Unknown (protein for MGC:100991) [Dan... 102 3e-20
gi|4507537|ref|NP_003260.1| nuclear receptor subfamily 2, group ... 102 3e-20
gi|45384018|ref|NP_990501.1| nuclear receptor TLX; tailless homo... 102 3e-20
gi|22726205|ref|NP_689415.1| nuclear receptor subfamily 2, group... 102 3e-20
gi|17568335|ref|NP_508547.1| defective FAsciculation of aXons FA... 101 4e-20
gi|32565808|ref|NP_501730.2| nuclear Hormone Receptor (nhr-138AN... 101 4e-20
gi|10197987|gb|AAG15128.1| nuclear receptor NHR-31 [Caenorhabdit... 101 4e-20
gi|47223192|emb|CAG11327.1| unnamed protein product [Tetraodon n... 101 4e-20
gi|25152753|ref|NP_741456.1| nuclear Hormone Receptor (65.5 kD) ... 101 4e-20
gi|7504432|pir||T29238 hypothetical protein F56E3.4 - Caenorhabd... 101 4e-20
gi|39597915|emb|CAE68607.1| Hypothetical protein CBG14485 [Caeno... 101 4e-20
gi|10197985|gb|AAG15127.1| nuclear receptor NHR-31 [Caenorhabdit... 101 4e-20
gi|34555893|emb|CAC70072.3| Hypothetical protein C28D4.9 [Caenor... 101 4e-20
gi|6007621|gb|AAF00981.1| RXR [Locusta migratoria] 100 6e-20
gi|33943178|gb|AAQ55293.1| nuclear receptor RXR-l [Locusta migra... 100 6e-20
gi|6681852|gb|AAF15392.2| paraneoplastic retinopathy associated ... 100 6e-20
gi|6094490|sp|P70052|NR21_XENLA Orphan nuclear receptor NR2E1 (N... 100 8e-20
gi|1351190|sp|P49116|TR4_HUMAN Orphan nuclear receptor TR4 (Orph... 100 1e-19
gi|2136283|pir||I59309 TR4 orphan receptor - human >gnl|BL_ORD_I... 100 1e-19
gi|36950991|ref|NP_003289.2| nuclear receptor subfamily 2, group... 100 1e-19
gi|45382987|ref|NP_989925.1| photoreceptor-specific nuclear rece... 100 1e-19
gi|48102185|ref|XP_392751.1| similar to ultraspiracle protein; R... 100 1e-19
gi|2143463|pir||I54075 gene mTR2R1 protein - mouse >gnl|BL_ORD_I... 100 1e-19
gi|1351191|sp|P49117|TR4_MOUSE Orphan nuclear receptor TR4 (Orph... 100 1e-19
gi|8394483|ref|NP_059019.1| TR4 orphan receptor; orphan receptor... 100 1e-19
gi|50754654|ref|XP_414462.1| PREDICTED: similar to type II zinc ... 100 1e-19
gi|19386469|gb|AAL86461.1| RXR-like protein [Biomphalaria glabrata] 100 1e-19
gi|8118613|gb|AAF73057.1| ultraspiracle protein; RXR [Apis melli... 100 1e-19
gi|13699898|gb|AAC32789.2| retinoid X receptor homolog [Celuca p... 99 2e-19
gi|16797878|gb|AAL29197.1| nuclear receptor AmNR4 isoform B [Acr... 99 2e-19
gi|9910805|sp|Q9YGL3|NR21_ORYLA Orphan nuclear receptor NR2E1 (N... 99 2e-19
gi|17538852|ref|NP_501731.1| nuclear Hormone Receptor (51.1 kD) ... 99 2e-19
gi|16797876|gb|AAL29196.1| nuclear receptor AmNR4 isoform A [Acr... 99 2e-19
gi|45708743|gb|AAH51670.1| NR2C2 protein [Homo sapiens] 99 2e-19
gi|7496642|pir||T19540 hypothetical protein C28D4.1 - Caenorhabd... 99 2e-19
gi|16797870|gb|AAL29193.1| nuclear receptor Amtll [Acropora mill... 99 2e-19
gi|25147899|ref|NP_510834.2| nuclear Hormone Receptor (nhr-1) [C... 99 2e-19
gi|28396008|gb|AAO39167.1| nuclear receptor NHR-1 [Caenorhabditi... 99 2e-19
gi|39590909|emb|CAE58689.1| Hypothetical protein CBG01866 [Caeno... 99 2e-19
gi|7506532|pir||T28881 hypothetical protein R09G11.2 - Caenorhab... 99 2e-19
gi|31249880|gb|AAP46279.1| Nuclear hormone receptor family prote... 99 2e-19
gi|32563637|ref|NP_871799.1| nuclear Hormone Receptor (nhr-49) [... 99 3e-19
gi|17508459|ref|NP_492613.1| nuclear Hormone Receptor (52.4 kD) ... 99 3e-19
gi|10198018|gb|AAG15143.1| nuclear receptor NHR-49 [Caenorhabdit... 99 3e-19
gi|27372315|dbj|BAC53670.1| ultraspiracle [Chilo suppressalis] 99 3e-19
gi|32307797|gb|AAP79295.1| tailless [Saccoglossus kowalevskii] 99 3e-19
gi|39598311|emb|CAE69004.1| Hypothetical protein CBG14997 [Caeno... 99 3e-19
gi|10198014|gb|AAG15141.1| nuclear receptor NHR-49 [Caenorhabdit... 99 3e-19
gi|13274556|gb|AAK17977.1| nuclear receptor NHR-49 [Caenorhabdit... 99 3e-19
gi|17508457|ref|NP_492612.1| nuclear Hormone Receptor (52.5 kD) ... 99 3e-19
gi|32563635|ref|NP_871798.1| nuclear Hormone Receptor (55.4 kD) ... 99 3e-19
gi|47224450|emb|CAG08700.1| unnamed protein product [Tetraodon n... 98 4e-19
gi|7511656|pir||T34093 steroid/thyroid/retinoic nuclear hormone ... 98 5e-19
gi|39594023|emb|CAE70133.1| Hypothetical protein CBG16594 [Caeno... 98 5e-19
gi|3098336|gb|AAC15589.1| retinoid X receptor [Amblyomma america... 97 7e-19
gi|24653841|ref|NP_725457.1| CG16801-PA [Drosophila melanogaster... 97 7e-19
gi|21464744|gb|AAM54497.1| ultraspiracle protein [Trichoplusia ni] 97 7e-19
gi|47207654|emb|CAF91378.1| unnamed protein product [Tetraodon n... 97 7e-19
gi|47217403|emb|CAG00763.1| unnamed protein product [Tetraodon n... 97 7e-19
gi|39595230|emb|CAE60267.1| Hypothetical protein CBG03844 [Caeno... 97 7e-19
gi|7657395|ref|NP_055064.1| photoreceptor-specific nuclear recep... 97 7e-19
gi|6983809|emb|CAB75361.1| USP protein [Tenebrio molitor] 97 7e-19
gi|4322668|gb|AAD16119.1| retinoic acid receptor RXR [Schistosom... 97 7e-19
gi|49250456|gb|AAH74651.1| Unknown (protein for MGC:69386) [Xeno... 97 7e-19
gi|33416678|gb|AAH56043.1| Nr2f6-prov protein [Xenopus laevis] 97 7e-19
gi|40807137|gb|AAH65330.1| Zgc:77259 protein [Danio rerio] 97 7e-19
gi|7706515|ref|NP_057430.1| photoreceptor-specific nuclear recep... 97 7e-19
gi|21464740|gb|AAM54495.1| ultraspiracle protein [Spodoptera fru... 97 7e-19
gi|31241051|ref|XP_320944.1| ENSANGP00000017626 [Anopheles gambi... 97 9e-19
gi|39595072|emb|CAE70940.1| Hypothetical protein CBG17744 [Caeno... 97 9e-19
gi|1144348|gb|AAC18408.1| TR4 [Mus musculus] 97 9e-19
gi|3098334|gb|AAC15588.1| retinoid X receptor [Amblyomma america... 97 1e-18
gi|1345734|sp|P49700|USP_BOMMO Ultraspiracle protein homolog (RX... 97 1e-18
gi|39591073|emb|CAE58853.1| Hypothetical protein CBG02077 [Caeno... 97 1e-18
gi|2133483|pir||I45066 steroid hormone receptor CNR14 - Caenorha... 97 1e-18
gi|21629462|gb|AAM69090.1| Nuclear hormone receptor family prote... 97 1e-18
gi|6434284|emb|CAB61000.1| Hypothetical protein F44A6.2b [Caenor... 97 1e-18
gi|27808670|sp|Q22127|NH40_CAEEL Nuclear hormone receptor family... 97 1e-18
gi|2155008|emb|CAA72296.1| ecdysone receptor [Tenebrio molitor] 97 1e-18
gi|39586726|emb|CAE65768.1| Hypothetical protein CBG10857 [Caeno... 97 1e-18
gi|25150325|ref|NP_741729.1| nuclear Hormone Receptor (50.6 kD) ... 97 1e-18
gi|25150534|ref|NP_509713.2| nuclear Hormone Receptor, X-chromos... 97 1e-18
gi|10198107|gb|AAG15187.1| sex-1 [Caenorhabditis elegans] 97 1e-18
gi|1718061|sp|P54779|USP_MANSE Ultraspiracle protein homolog >gn... 97 1e-18
gi|7305323|ref|NP_038736.1| photoreceptor-specific nuclear recep... 96 1e-18
gi|16797884|gb|AAL29200.1| nuclear receptor AmNR7 [Acropora mill... 96 1e-18
gi|48097742|ref|XP_391942.1| similar to ENSANGP00000021001 [Apis... 96 1e-18
gi|112859|sp|P16376|7UP2_DROME Steroid receptor seven-up type 2 ... 96 1e-18
gi|24646228|ref|NP_731681.1| CG11502-PA [Drosophila melanogaster... 96 1e-18
gi|1685271|gb|AAB36777.1| RXR alpha 2 [Mus musculus] >gnl|BL_ORD... 96 1e-18
gi|6755384|ref|NP_035435.1| retinoid X receptor alpha; RXR alpha... 96 1e-18
gi|6981496|ref|NP_036937.1| retinoid X receptor alpha [Rattus no... 96 1e-18
gi|17737921|ref|NP_524325.1| CG11502-PB [Drosophila melanogaster... 96 1e-18
gi|39645799|gb|AAH63827.1| RXRA protein [Homo sapiens] 96 2e-18
gi|4003528|gb|AAC95154.1| retinoic acid receptor RXR [Cloning ve... 96 2e-18
gi|48475404|gb|AAT44330.1| USP [Plodia interpunctella] 96 2e-18
gi|8096|emb|CAA36827.1| unnamed protein product [Drosophila mela... 96 2e-18
gi|103409|pir||A35872 steroid hormone receptor-like related prot... 96 2e-18
gi|45383323|ref|NP_989752.1| nuclear receptor subfamily 2, group... 96 2e-18
gi|9931482|gb|AAG02188.1| retinoid-X-receptor [Cloning vector pF... 96 2e-18
gi|34785135|gb|AAH56748.1| Zgc:65854 protein [Danio rerio] 96 2e-18
gi|47213822|emb|CAF95413.1| unnamed protein product [Tetraodon n... 96 2e-18
gi|16797886|gb|AAL29201.1| nuclear receptor AmNR8 [Acropora mill... 96 2e-18
gi|4506755|ref|NP_002948.1| retinoid X receptor, alpha [Homo sap... 96 2e-18
gi|17136580|ref|NP_476781.1| CG4380-PA [Drosophila melanogaster]... 96 2e-18
gi|10946383|gb|AAG24886.1| ultraspiracle isoform-A [Aedes aegypti] 96 3e-18
gi|25152746|ref|NP_502117.2| nuclear Hormone Receptor (60.4 kD) ... 96 3e-18
gi|10946385|gb|AAG24887.1| ultraspiracle isoform-B [Aedes aegypti] 96 3e-18
gi|39593743|emb|CAE62036.1| Hypothetical protein CBG06052 [Caeno... 96 3e-18
gi|2895868|gb|AAC03056.1| ultraspiracle [Chironomus tentans] 96 3e-18
gi|2895134|gb|AAC02906.1| hepatocyte nuclear factor 4 alpha [Mus... 96 3e-18
gi|32450510|gb|AAH54009.1| Unknown (protein for IMAGE:6615869) [... 96 3e-18
gi|47216397|emb|CAG01948.1| unnamed protein product [Tetraodon n... 96 3e-18
gi|18044456|gb|AAH19432.1| Rxrb protein [Mus musculus] 95 3e-18
gi|483195|pir||D41727 retinoid X receptor beta - mouse 95 3e-18
gi|7709422|gb|AAA40081.2| retinoid X receptor beta [Mus musculus] 95 3e-18
gi|13489062|ref|NP_035436.1| retinoid X receptor beta [Mus muscu... 95 3e-18
gi|1710810|sp|P51129|RXRG_XENLA RETINOIC ACID RECEPTOR RXR-GAMMA... 95 3e-18
gi|285011|pir||S26669 retinoic acid receptor X-beta - mouse >gnl... 95 3e-18
gi|34852205|ref|XP_342096.1| similar to Retinoic acid receptor R... 95 3e-18
gi|1710720|sp|P49743|RXRB_RAT Retinoic acid receptor RXR-beta (N... 95 3e-18
gi|1498066|gb|AAB06335.1| nuclear orphan receptor 95 3e-18
gi|38492974|pdb|1R0O|A Chain A, Crystal Structure Of The Heterod... 95 3e-18
gi|14624971|gb|AAG01569.1| ultraspiracle protein [Lucilia cuprina] 95 3e-18
gi|16118883|gb|AAL14642.1| retinoid X receptor beta [Mustela vison] 95 3e-18
gi|44885904|dbj|BAD12053.1| ultraspiracle protein [Lucilia seric... 95 3e-18
gi|337720|gb|AAA60293.1| retinoid X receptor beta 95 3e-18
gi|11415052|ref|NP_068811.1| retinoid X receptor, beta; MHC clas... 95 3e-18
gi|542994|pir||S37781 retinoid X receptor beta - human 95 3e-18
gi|109944|pir||A34418 H-2 region II binding protein - mouse (fra... 95 3e-18
gi|112259|pir||A41651 retinoic acid receptor coregulator - rat >... 95 3e-18
gi|46237552|emb|CAE83933.1| retinoid X receptor beta [Rattus nor... 95 3e-18
gi|39586724|emb|CAE65766.1| Hypothetical protein CBG10855 [Caeno... 95 4e-18
gi|31249879|gb|AAP46278.1| Nuclear hormone receptor family prote... 95 4e-18
gi|28396014|gb|AAO39170.1| nuclear receptor NHR-1 [Caenorhabditi... 95 4e-18
gi|5353742|gb|AAD42224.1| COUP transcription factor 1 [Xenopus l... 95 4e-18
gi|8096685|gb|AAF71999.1| tailless ortholog [Tribolium castaneum] 95 4e-18
gi|33468584|emb|CAE30390.1| SI:zC167P9.1 (novel protein similar ... 95 4e-18
gi|2119679|pir||A56558 retinoic acid receptor isoform alpha 2.1 ... 95 4e-18
gi|1710711|sp|P51126|RRA_XENLA Retinoic acid receptor alpha (RAR... 95 4e-18
gi|33943630|gb|AAQ55494.1| NHR-41A [Caenorhabditis elegans] 95 4e-18
gi|45477170|sp|Q9N4B8|NH41_CAEEL Nuclear hormone receptor family... 95 4e-18
gi|1583309|prf||2120366D retinoid X receptor:ISOTYPE=gamma 95 4e-18
gi|21310109|gb|AAM46150.1| nuclear orphan receptor TR2/4 [Branch... 95 4e-18
gi|47086055|ref|NP_998404.1| zgc:77260 [Danio rerio] >gnl|BL_ORD... 95 4e-18
gi|47214408|emb|CAG00249.1| unnamed protein product [Tetraodon n... 95 4e-18
gi|32699513|sp|Q21878|NHR1_CAEEL Nuclear hormone receptor family... 95 4e-18
gi|8248247|gb|AAF74116.1| Tc-tailless [Tribolium castaneum] 95 4e-18
gi|1703646|gb|AAB37686.1| xCOUP-TF-B=proposed retinoid receptor-... 95 4e-18
gi|27924187|gb|AAH44975.1| Nr2f2-prov protein [Xenopus laevis] 95 4e-18
gi|20302778|gb|AAM18898.1| unknown [Branchiostoma floridae] 95 4e-18
gi|8478106|sp|Q90416|RXRA_BRARE RETINOIC ACID RECEPTOR RXR-ALPHA... 95 4e-18
gi|41282088|ref|NP_571292.2| retinoid x receptor, alpha; retinoi... 95 4e-18
gi|18859343|ref|NP_571313.1| retinoid x receptor, delta; retinoi... 95 4e-18
gi|18859345|ref|NP_571228.1| retinoid x receptor, gamma; etID309... 95 4e-18
gi|283822|pir||A41977 retinoic acid receptor alpha - African cla... 95 4e-18
gi|33943632|gb|AAQ55495.1| NHR-41B [Caenorhabditis elegans] 95 4e-18
gi|1710719|sp|P51128|RXRA_XENLA Retinoic acid receptor RXR-alpha 94 6e-18
gi|283824|pir||C41977 retinoid receptor alpha - African clawed frog 94 6e-18
gi|39584675|emb|CAE72428.1| Hypothetical protein CBG19594 [Caeno... 94 6e-18
gi|45383862|ref|NP_989455.1| nuclear receptor subfamily 2, group... 94 6e-18
gi|5032173|ref|NP_005645.1| nuclear receptor subfamily 2, group ... 94 6e-18
gi|20589472|ref|NP_571255.1| nuclear receptor subfamily 2, group... 94 6e-18
gi|466468|gb|AAA19853.1| COUP-TFI 94 6e-18
gi|6601567|gb|AAF19033.1| ultraspiracle [Aedes albopictus] 94 6e-18
gi|13592107|ref|NP_112392.1| nuclear receptor subfamily 2, group... 94 6e-18
gi|30140|emb|CAA34277.1| COUP-TF [Homo sapiens] >gnl|BL_ORD_ID|1... 94 6e-18
gi|18202151|sp|O76202|USP_CHOFU Ultraspiracle protein homolog >g... 94 6e-18
gi|104087|pir||S20617 transcription factor Coup - African clawed... 94 6e-18
gi|34852970|ref|XP_346612.1| hypothetical protein XP_346611 [Rat... 94 6e-18
gi|47224170|emb|CAG13090.1| unnamed protein product [Tetraodon n... 94 6e-18
gi|47940249|gb|AAH72132.1| RXR<beta> protein [Xenopus laevis] 94 6e-18
gi|31234138|ref|XP_319010.1| ENSANGP00000014866 [Anopheles gambi... 94 6e-18
gi|3929579|gb|AAC80008.1| retinoic acid X receptor [Tripedalia c... 94 6e-18
gi|28461227|ref|NP_786998.1| nuclear receptor subfamily 2, group... 94 6e-18
gi|280730|pir||A43786 retinoic acid receptor beta-4 - chicken >g... 94 6e-18
gi|6753770|ref|NP_034281.1| nuclear receptor subfamily 2, group ... 94 6e-18
gi|24111246|ref|NP_571258.1| nuclear receptor subfamily 2, group... 94 6e-18
gi|1085220|pir||S47633 RXR protein - African clawed frog >gnl|BL... 94 6e-18
gi|14198162|gb|AAH08138.1| Nr2f6 protein [Mus musculus] 94 7e-18
gi|7441783|pir||S78481 retinoic acid receptor alpha-2 - eastern ... 94 7e-18
gi|12484038|gb|AAG53940.1| nuclear hormone receptor [Aedes aegypti] 94 7e-18
gi|133488|sp|P18514|RRA_NOTVI Retinoic acid receptor alpha (RAR-... 94 7e-18
gi|23504267|emb|CAA52153.2| retinoic acid receptor gamma 2 isofo... 94 7e-18
gi|18031833|gb|AAL02360.1| retinoic acid receptor alpha [Mesocri... 94 7e-18
gi|840922|emb|CAA60792.1| retinoid X receptor beta [Xenopus laevis] 94 7e-18
gi|5631312|dbj|BAA82618.1| retinoid X receptor [Polyandrocarpa m... 94 7e-18
gi|49114890|gb|AAH73179.1| Rxrb-A-prov protein [Xenopus laevis] 94 7e-18
gi|17367840|sp|Q9W5Z3|RRA_FUGRU Retinoic acid receptor alpha (RA... 94 1e-17
gi|38614465|gb|AAH63018.1| NR2F6 protein [Homo sapiens] 94 1e-17
gi|18858747|ref|NP_571331.1| nuclear receptor subfamily 6, group... 94 1e-17
gi|42794040|dbj|BAD11773.1| thyroid hormone receptor beta [Oryzi... 94 1e-17
gi|17864126|ref|NP_524596.1| CG1378-PA [Drosophila melanogaster]... 94 1e-17
gi|50539758|ref|NP_001002345.1| zgc:92183 [Danio rerio] >gnl|BL_... 94 1e-17
gi|47214969|emb|CAG01303.1| unnamed protein product [Tetraodon n... 94 1e-17
gi|4972008|emb|CAB43871.1| retinoic acid receptor alpha-2 [Takif... 94 1e-17
gi|47226025|emb|CAG04399.1| unnamed protein product [Tetraodon n... 94 1e-17
gi|6094474|sp|Q91279|THB_PAROL Thyroid hormone receptor beta (TH... 94 1e-17
gi|18859511|ref|NP_571415.1| thyroid hormone receptor beta [Dani... 94 1e-17
gi|38197463|gb|AAH02669.2| NR2F6 protein [Homo sapiens] 94 1e-17
gi|630868|pir||S43435 nuclear receptor protein DR-78 - fruit fly... 94 1e-17
gi|4377451|emb|CAA51523.1| DR-78 [Drosophila melanogaster] 94 1e-17
gi|9955274|pdb|1DSZ|B Chain B, Structure Of The RxrRAR DNA-Bindi... 94 1e-17
gi|38492970|pdb|1R0N|A Chain A, Crystal Structure Of Heterodimer... 94 1e-17
gi|6980611|pdb|1BY4|A Chain A, Structure And Mechanism Of The Ho... 94 1e-17
gi|39594190|emb|CAE70300.1| Hypothetical protein CBG16821 [Caeno... 94 1e-17
gi|20070199|ref|NP_005225.2| nuclear receptor subfamily 2, group... 94 1e-17
gi|19919404|gb|AAM08268.1| nuclear receptor RXR [Dirofilaria imm... 94 1e-17
gi|1362653|pir||B47265 tailless (tll) protein - fruit fly (Droso... 94 1e-17
gi|6094487|sp|O16845|TLL_DROVI Tailless protein >gnl|BL_ORD_ID|1... 94 1e-17
gi|18157523|dbj|BAB83838.1| partially supported by GENSCAN and G... 94 1e-17
gi|2529508|gb|AAB81178.1| developmental orphan receptor 2 [Xenop... 93 1e-17
gi|49118996|gb|AAH73700.1| DOR2 protein [Xenopus laevis] 93 1e-17
gi|2243140|emb|CAA67384.1| nuclear hormone receptor [Drosophila ... 93 1e-17
gi|6753956|ref|NP_034394.1| nuclear receptor subfamily 6, group ... 93 1e-17
gi|3093388|emb|CAA06670.1| thr4 [Tenebrio molitor] 93 1e-17
gi|47216868|emb|CAG11675.1| unnamed protein product [Tetraodon n... 93 1e-17
gi|514833|gb|AAA19975.1| nuclear hormone receptor superfamily pr... 93 1e-17
gi|539440|pir||A49070 ecdysone-inducible protein E78A - fruit fl... 93 1e-17
gi|15451850|ref|NP_201592.1| nuclear receptor subfamily 6, group... 93 1e-17
gi|48124819|ref|XP_396565.1| similar to tailless ortholog [Apis ... 93 1e-17
gi|29650880|gb|AAO86517.1| thyroid hormone receptor-beta [Sparus... 93 1e-17
gi|1054912|gb|AAB19174.1| orphan steroid hormone receptor 2 93 1e-17
gi|12643728|sp|Q15406|NR61_HUMAN Orphan nuclear receptor NR6A1 (... 93 1e-17
gi|234371|gb|AAB19628.1| retinoic acid receptor-beta; RAR-beta [... 93 1e-17
gi|48095654|ref|XP_394499.1| similar to CG9799-PA [Apis mellifera] 93 1e-17
gi|24667937|ref|NP_524195.2| CG18023-PA [Drosophila melanogaster... 93 1e-17
gi|34853889|ref|XP_342428.1| similar to germ cell nuclear factor... 93 1e-17
gi|15451846|ref|NP_001480.2| nuclear receptor subfamily 6, group... 93 1e-17
gi|21040480|gb|AAH30600.1| Nuclear receptor subfamily 6, group A... 93 1e-17
gi|14388521|dbj|BAB60786.1| hypothetical protein [Macaca fascicu... 93 1e-17
gi|7769648|gb|AAF69494.1| nuclear receptor E78A [Drosophila mela... 93 1e-17
gi|34223729|sp|P45447|E78A_DROME Ecdysone-induced protein 78C (D... 93 1e-17
gi|27806025|ref|NP_776827.1| nuclear receptor subfamily 2, group... 93 2e-17
gi|482928|emb|CAA54096.1| ARP-1 [Mus musculus] 93 2e-17
gi|14149746|ref|NP_066285.1| nuclear receptor subfamily 2, group... 93 2e-17
gi|4165446|emb|CAA22836.1| EG:133E12.2 [Drosophila melanogaster] 93 2e-17
gi|18158445|ref|NP_542956.1| nuclear receptor subfamily 2, group... 93 2e-17
gi|62977|emb|CAA40616.1| retinoic acid receptor beta [Gallus gal... 93 2e-17
gi|1169455|sp|P43136|EAR2_MOUSE Orphan nuclear receptor EAR-2 (V... 93 2e-17
gi|24639230|ref|NP_569967.2| CG16902-PA [Drosophila melanogaster... 93 2e-17
gi|41351197|gb|AAH65651.1| Unknown (protein for MGC:77353) [Dani... 93 2e-17
gi|32454395|gb|AAP82999.1| ovalbumin upstream promoter transcrip... 93 2e-17
gi|28974300|gb|AAO61416.1| COUP-TF [Branchiostoma floridae] 93 2e-17
gi|62979|emb|CAA40615.1| retinoic acid receptor beta,isoform 4 [... 93 2e-17
gi|4160012|gb|AAD05225.1| dissatisfaction [Drosophila melanogaster] 93 2e-17
gi|45553962|ref|NP_996331.1| CG16902-PB [Drosophila melanogaster... 93 2e-17
gi|17367843|sp|Q9W6B3|RRB_COTJA Retinoic acid receptor beta (RAR... 93 2e-17
gi|45384512|ref|NP_990657.1| retinoic acid receptor beta [Gallus... 93 2e-17
gi|104852|pir||S13512 retinoic acid receptor beta-1 - chicken >g... 93 2e-17
gi|17137164|ref|NP_477140.1| CG9019-PA [Drosophila melanogaster]... 93 2e-17
gi|969047|gb|AAC32729.1| retinoid X receptor alpha homolog [Celu... 93 2e-17
gi|7496469|pir||T34118 hypothetical protein C25B8.6 - Caenorhabd... 93 2e-17
gi|2148007|pir||I51256 retinoic acid receptor alpha - zebra fish... 93 2e-17
gi|24638448|ref|NP_571481.1| retinoic acid receptor alpha-2.A; z... 93 2e-17
gi|538262|gb|AAA21479.1| ovalbumin upstream promoter transcripti... 93 2e-17
gi|31247990|ref|XP_316596.1| ENSANGP00000002564 [Anopheles gambi... 93 2e-17
gi|25151791|ref|NP_509116.2| nuclear Hormone Receptor (54.9 kD) ... 93 2e-17
gi|21310111|gb|AAM46151.1| nuclear hormone receptor RXR [Branchi... 92 2e-17
gi|31239819|ref|XP_320323.1| ENSANGP00000009112 [Anopheles gambi... 92 2e-17
gi|20806167|ref|NP_620813.1| nuclear receptor subfamily 2, group... 92 2e-17
gi|28558767|sp|P28699|RRG_XENLA Retinoic acid receptor gamma (RA... 92 2e-17
gi|1173170|sp|P18516|RRG_NOTVI Retinoic acid receptor gamma (RAR... 92 2e-17
gi|8895462|gb|AAF80975.1| retonoic acid receptor gamma 2 [Ambyst... 92 2e-17
gi|14133772|gb|AAK54127.1| nuclear receptor nhr-7A [Dirofilaria ... 92 2e-17
gi|39585457|emb|CAE70540.1| Hypothetical protein CBG17178 [Caeno... 92 2e-17
gi|1843450|emb|CAA49562.1| largest of the predicted retinoic aci... 92 2e-17
gi|85682|pir||S06124 retinoic acid receptor delta - eastern newt... 92 2e-17
gi|2738904|gb|AAB94566.1| AamEcRA1 [Amblyomma americanum] 92 2e-17
gi|6753768|ref|NP_034280.1| nuclear receptor subfamily 2, group ... 92 2e-17
gi|50080130|dbj|BAD27471.1| thyroid hormone receptor beta 1 [Con... 92 2e-17
gi|29351682|gb|AAH49301.1| Rara2b protein [Danio rerio] 92 2e-17
gi|2738906|gb|AAB94567.1| AamEcRA2 [Amblyomma americanum] 92 2e-17
gi|15489203|gb|AAH13709.1| Rarg protein [Mus musculus] 92 2e-17
gi|8895460|gb|AAF80974.1| retinoic acid receptor gamma 1 [Ambyst... 92 2e-17
gi|2738902|gb|AAB94565.1| AamEcRA3 [Amblyomma americanum] 92 2e-17
gi|39592385|emb|CAE63462.1| Hypothetical protein CBG07928 [Caeno... 92 2e-17
gi|422530|pir||A46358 steroid/thyroid hormone receptor SpCOUP-TF... 92 2e-17
gi|2352809|gb|AAB69281.1| developmental orphan receptor-1 precur... 92 2e-17
gi|14133778|gb|AAK54129.1| nuclear receptor nhr-7C [Dirofilaria ... 92 2e-17
gi|104175|pir||A38592 retinoic acid receptor gamma-2 - African c... 92 2e-17
gi|1839486|gb|AAB47115.1| retinoic acid receptor gamma isoform 2... 92 2e-17
gi|1839488|gb|AAB47116.1| retinoic acid receptor gamma isoform 2... 92 2e-17
gi|87346|pir||S02709 ear-2 protein - human >gnl|BL_ORD_ID|871512... 92 2e-17
gi|20589475|ref|NP_571261.1| nuclear receptor subfamily 2, group... 92 2e-17
gi|17562738|ref|NP_504455.1| nuclear Hormone Receptor (64.6 kD) ... 92 3e-17
gi|2661447|emb|CAA05768.1| retinoic acid receptor alpha2 [Rattus... 92 3e-17
gi|21744271|gb|AAM76194.1| RE08410p [Drosophila melanogaster] 92 3e-17
gi|33879052|gb|AAH19098.2| RARG protein [Homo sapiens] 92 3e-17
gi|18031837|gb|AAL02362.1| retinoic acid receptor gamma-2 [Mesoc... 92 3e-17
gi|133500|sp|P22932|RRG2_HUMAN Retinoic acid receptor gamma-2 (R... 92 3e-17
gi|14090242|dbj|BAB55582.1| seven-up alpha [Bombyx mori] 92 3e-17
gi|4506423|ref|NP_000957.1| retinoic acid receptor, gamma; retin... 92 3e-17
gi|31219307|ref|XP_316782.1| ENSANGP00000001878 [Anopheles gambi... 92 3e-17
gi|6318676|gb|AAF06997.1| nuclear hormone receptor [Onchocerca v... 92 3e-17
gi|31560805|ref|NP_035374.2| retinoic acid receptor, gamma; RAR ... 92 3e-17
gi|7441781|pir||A34714 retinoic acid receptor gamma-1 - mouse >g... 92 3e-17
gi|17380507|sp|P10826|RRB_HUMAN Retinoic acid receptor beta (RAR... 92 3e-17
gi|1515433|gb|AAC60126.1| xGCNF 92 3e-17
gi|25396452|pir||G89050 protein T05C3.1 [imported] - Caenorhabdi... 92 3e-17
gi|17569107|ref|NP_510536.1| nuclear Hormone Receptor (53.3 kD) ... 92 3e-17
gi|31206855|ref|XP_312394.1| ENSANGP00000002992 [Anopheles gambi... 92 3e-17
gi|31242731|ref|XP_321796.1| ENSANGP00000009745 [Anopheles gambi... 92 3e-17
gi|47938910|gb|AAH72462.1| RARG protein [Homo sapiens] 92 3e-17
gi|45384256|ref|NP_990625.1| retinoic acid receptor [Gallus gall... 92 3e-17
gi|2661445|emb|CAA05767.1| retinoic acid receptor alpha1 [Rattus... 92 3e-17
gi|7496412|pir||T33174 hypothetical protein C24G6.4 - Caenorhabd... 92 3e-17
gi|133501|sp|P20787|RRG2_MOUSE Retinoic acid receptor gamma-B (R... 92 3e-17
gi|14916494|ref|NP_000956.2| retinoic acid receptor, beta isofor... 92 3e-17
gi|32026|emb|CAA68398.1| unnamed protein product [Homo sapiens] 92 3e-17
gi|35883|emb|CAA30262.1| unnamed protein product [Homo sapiens] 92 3e-17
gi|10198098|gb|AAG15183.1| nuclear receptor NHR-91 [Caenorhabdit... 92 3e-17
gi|10198094|gb|AAG15181.1| nuclear receptor NHR-91 [Caenorhabdit... 92 3e-17
gi|1743345|emb|CAA71177.1| retinoic acid receptor-alpha [Mus spr... 92 3e-17
gi|13928712|ref|NP_113716.1| retinoic acid receptor, alpha [Ratt... 92 3e-17
gi|40353037|gb|AAH64524.1| Unknown (protein for IMAGE:5738222) [... 92 3e-17
gi|33386531|emb|CAD45002.1| retinoid X receptor beta [Takifugu r... 92 4e-17
gi|47225542|emb|CAG12025.1| unnamed protein product [Tetraodon n... 92 4e-17
gi|39593723|emb|CAE62015.1| Hypothetical protein CBG06024 [Caeno... 92 4e-17
gi|34868575|ref|XP_217064.2| similar to retinoic acid receptor g... 92 4e-17
gi|39593153|emb|CAE64622.1| Hypothetical protein CBG09380 [Caeno... 92 4e-17
gi|4757121|emb|CAB42095.1| thyroid hormone receptor beta 1 (c-er... 92 4e-17
gi|47205276|emb|CAF94543.1| unnamed protein product [Tetraodon n... 92 4e-17
gi|39587996|emb|CAE57227.1| Hypothetical protein CBG00093 [Caeno... 92 4e-17
gi|47199347|emb|CAF88861.1| unnamed protein product [Tetraodon n... 92 4e-17
gi|48096713|ref|XP_394760.1| similar to ecdysone receptor [Apis ... 92 4e-17
gi|24308525|ref|NP_571414.1| retinoic acid receptor gamma; etID3... 92 4e-17
gi|31231749|ref|XP_318587.1| ENSANGP00000004574 [Anopheles gambi... 92 4e-17
gi|47228660|emb|CAG07392.1| unnamed protein product [Tetraodon n... 92 4e-17
gi|215028|gb|AAB59953.1| retinoic acid receptor gamma-2 92 4e-17
gi|31229063|ref|XP_318161.1| ENSANGP00000003675 [Anopheles gambi... 92 4e-17
gi|15451848|ref|NP_201591.1| nuclear receptor subfamily 6, group... 92 4e-17
gi|45383107|ref|NP_989867.1| retinoic acid receptor alpha 1 isof... 92 4e-17
gi|4405799|gb|AAD19828.1| ecdysone receptor [Locusta migratoria] 92 4e-17
gi|2507416|sp|P18112|THB_CHICK THYROID HORMONE RECEPTOR BETA >gn... 92 4e-17
gi|45382081|ref|NP_990778.1| beta-thyroid hormone receptor [Gall... 92 4e-17
gi|72120|pir||TVCHTB thyroid hormone receptor beta - chicken 92 4e-17
gi|2119682|pir||I50674 retinoic acid receptor alpha isoform 2-1 ... 92 4e-17
gi|22859106|emb|CAA55132.1| retinoic acid receptor alpha isoform... 92 4e-17
gi|21464746|gb|AAM54498.1| hormone receptor 4 [Trichoplusia ni] 91 5e-17
gi|18031835|gb|AAL02361.1| retinoic acid receptor beta-2 [Mesocr... 91 5e-17
gi|45593124|ref|NP_035373.1| retinoic acid receptor, beta; RAR b... 91 5e-17
gi|49257584|gb|AAH74169.1| Unknown (protein for MGC:81974) [Xeno... 91 5e-17
gi|17535075|ref|NP_494368.1| nuclear Hormone Receptor (nhr-119) ... 91 5e-17
gi|133484|sp|P11416|RRA_MOUSE Retinoic acid receptor alpha (RAR-... 91 5e-17
gi|4507673|ref|NP_003288.1| nuclear receptor subfamily 2, group ... 91 5e-17
gi|39583189|emb|CAE61407.1| Hypothetical protein CBG05270 [Caeno... 91 5e-17
gi|1049076|gb|AAC29502.1| TR2 [Mus musculus] >gnl|BL_ORD_ID|1608... 91 5e-17
gi|31982760|ref|NP_035759.2| nuclear receptor subfamily 2, group... 91 5e-17
gi|386369|gb|AAB27245.1| retinoid-X receptor-gamma isoform 2; mR... 91 5e-17
gi|34194058|gb|AAH56574.1| Nuclear receptor subfamily 2, group F... 91 5e-17
gi|2780196|emb|CAA11109.1| retinoic acid X receptor gamma-1 [Rat... 91 5e-17
gi|32451843|gb|AAH54649.1| Rxrb protein [Danio rerio] 91 5e-17
gi|136117|sp|P13056|TR2_HUMAN Orphan nuclear receptor TR2 >gnl|B... 91 5e-17
gi|40886675|gb|AAR96256.1| retinoid X receptor gamma [Sus scrofa] 91 5e-17
gi|215026|gb|AAA50050.1| retinoic acid receptor alpha-2.B 91 5e-17
gi|2661449|emb|CAA05769.1| retinoic acid receptor beta2 [Rattus ... 91 5e-17
gi|53891|emb|CAA40749.1| retinoic acid receptor-alpha [Mus muscu... 91 5e-17
gi|1245814|gb|AAB35576.1| cUSP=dUSP ecdysteroid receptor homolog... 91 5e-17
gi|5566124|gb|AAD45325.1| retinoid-x-receptor [Schistosoma mansoni] 91 5e-17
gi|4928143|gb|AAD33428.1| retinoid X receptor RXR-2 [Schistosoma... 91 5e-17
gi|105871|pir||A36738 orphan receptor TR2, splice form TR2-9 - h... 91 5e-17
gi|24308520|ref|NP_571350.1| retinoid x receptor, beta; retinoid... 91 5e-17
gi|31222116|ref|XP_317123.1| ENSANGP00000018222 [Anopheles gambi... 91 5e-17
gi|13677226|gb|AAC33432.2| ecdysteroid receptor [Celuca pugilator] 91 5e-17
gi|5902068|ref|NP_008848.1| retinoid X receptor, gamma [Homo sap... 91 5e-17
gi|6677829|ref|NP_033133.1| retinoid X receptor gamma [Mus muscu... 91 5e-17
gi|285012|pir||S26670 retinoic acid receptor X-gamma - mouse >gn... 91 5e-17
gi|34880904|ref|XP_341152.1| retinoid X receptor gamma [Rattus n... 91 5e-17
gi|133494|sp|P22605|RRB_MOUSE Retinoic acid receptor beta (RAR-b... 91 5e-17
gi|1314310|gb|AAB00113.1| nucleophosmin-retinoic acid receptor a... 91 6e-17
gi|226050|prf||1408258A retinoic acid receptor 91 6e-17
gi|2119680|pir||B56558 retinoic acid receptor isoform alpha 2.2 ... 91 6e-17
gi|4506419|ref|NP_000955.1| retinoic acid receptor, alpha; Retin... 91 6e-17
gi|4160009|gb|AAD05222.1| retinoic acid receptor alpha [Homo sap... 91 6e-17
gi|35874|emb|CAA29787.1| unnamed protein product [Homo sapiens] 91 6e-17
gi|21955144|ref|NP_665723.1| pregnancy specific beta-1-glycoprot... 91 6e-17
gi|190125|gb|AAA60126.1| PML-RAR protein 91 6e-17
gi|17979668|gb|AAL50350.1| hormone receptor 4 [Manduca sexta] 91 6e-17
gi|15741116|gb|AAL06732.1| thyroid hormone receptor beta small i... 91 6e-17
gi|17569093|ref|NP_510115.1| nuclear Hormone Receptor (nhr-17) [... 91 6e-17
gi|135713|sp|P18117|THBA_XENLA Thyroid hormone receptor beta-A >... 91 6e-17
gi|1729929|sp|Q02965|THB_RANCA THYROID HORMONE RECEPTOR BETA >gn... 91 6e-17
gi|15741114|gb|AAL06731.1| thyroid hormone receptor beta large i... 91 6e-17
gi|7638251|gb|AAF65452.1| ECFP-retinoic acid receptor alpha fusi... 91 6e-17
gi|1314308|gb|AAB00112.1| nucleophosmin-retinoic acid receptor a... 91 6e-17
gi|47939545|gb|AAH71733.1| Unknown (protein for MGC:88071) [Homo... 91 6e-17
gi|9955273|pdb|1DSZ|A Chain A, Structure Of The RxrRAR DNA-Bindi... 91 6e-17
gi|545176|gb|AAB29813.1| retinoic acid receptor alpha, RAR alpha... 91 6e-17
gi|16151215|gb|AAL13127.1| thyroid hormone receptor beta [Rana p... 91 6e-17
gi|213964|gb|AAA49654.1| thyroid hormone receptor beta A1 protein 91 6e-17
gi|5052744|gb|AAD38691.1| thyroid hormone receptor beta [Salmo s... 91 6e-17
gi|3510458|gb|AAC33511.1| nuclear mitotic apparatus protein-reti... 91 6e-17
gi|8815561|gb|AAB19602.2| retinoic acid receptor alpha; RAR alph... 91 6e-17
gi|21310107|gb|AAM46149.1| retinoic acid receptor [Branchiostoma... 91 6e-17
>gi|14574111|gb|AAD31548.2| Nuclear hormone receptor family protein
21, isoform d [Caenorhabditis elegans]
Length = 446
Score = 833 bits (2153), Expect = 0.0
Identities = 410/446 (91%), Positives = 410/446 (91%)
Frame = +1
Query: 1 MGPRSKSTMRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWK 180
MGPRSKSTMRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWK
Sbjct: 1 MGPRSKSTMRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWK 60
Query: 181 NRTYACRYQGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVE 360
NRTYACRYQGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVE
Sbjct: 61 NRTYACRYQGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVE 120
Query: 361 MHPYTKEVECQTEVXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXXXXXXNCLAMLPPN 540
MHPYTKEVECQTEV F NCLAMLPPN
Sbjct: 121 MHPYTKEVECQTEVSTISSHPTSPSTLPFVSSGSSICSVSSSCSSVSTVYSNCLAMLPPN 180
Query: 541 PSLPKYDYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATL 720
PSLPKYDYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATL
Sbjct: 181 PSLPKYDYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATL 240
Query: 721 PEVLQDFRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGV 900
PEVLQDFRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGV
Sbjct: 241 PEVLQDFRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGV 300
Query: 901 CYANGAYHPSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLP 1080
CYANGAYHPSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLP
Sbjct: 301 CYANGAYHPSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLP 360
Query: 1081 PKVSYASTHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNI 1260
PKVSYASTHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNI
Sbjct: 361 PKVSYASTHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNI 420
Query: 1261 ELSDVLHVMEVDQLITEAFDVHRPME 1338
ELSDVLHVMEVDQLITEAFDVHRPME
Sbjct: 421 ELSDVLHVMEVDQLITEAFDVHRPME 446
>gi|4139092|gb|AAD03691.1| nuclear receptor NHR-21a [Caenorhabditis
elegans]
Length = 458
Score = 833 bits (2153), Expect = 0.0
Identities = 410/446 (91%), Positives = 410/446 (91%)
Frame = +1
Query: 1 MGPRSKSTMRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWK 180
MGPRSKSTMRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWK
Sbjct: 13 MGPRSKSTMRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWK 72
Query: 181 NRTYACRYQGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVE 360
NRTYACRYQGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVE
Sbjct: 73 NRTYACRYQGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVE 132
Query: 361 MHPYTKEVECQTEVXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXXXXXXNCLAMLPPN 540
MHPYTKEVECQTEV F NCLAMLPPN
Sbjct: 133 MHPYTKEVECQTEVSTISSHPTSPSTLPFVSSGSSICSVSSSCSSVSTVYSNCLAMLPPN 192
Query: 541 PSLPKYDYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATL 720
PSLPKYDYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATL
Sbjct: 193 PSLPKYDYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATL 252
Query: 721 PEVLQDFRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGV 900
PEVLQDFRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGV
Sbjct: 253 PEVLQDFRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGV 312
Query: 901 CYANGAYHPSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLP 1080
CYANGAYHPSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLP
Sbjct: 313 CYANGAYHPSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLP 372
Query: 1081 PKVSYASTHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNI 1260
PKVSYASTHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNI
Sbjct: 373 PKVSYASTHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNI 432
Query: 1261 ELSDVLHVMEVDQLITEAFDVHRPME 1338
ELSDVLHVMEVDQLITEAFDVHRPME
Sbjct: 433 ELSDVLHVMEVDQLITEAFDVHRPME 458
>gi|32563894|ref|NP_495534.3| nuclear Hormone Receptor (nhr-21)
[Caenorhabditis elegans]
Length = 455
Score = 833 bits (2153), Expect = 0.0
Identities = 410/446 (91%), Positives = 410/446 (91%)
Frame = +1
Query: 1 MGPRSKSTMRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWK 180
MGPRSKSTMRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWK
Sbjct: 10 MGPRSKSTMRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWK 69
Query: 181 NRTYACRYQGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVE 360
NRTYACRYQGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVE
Sbjct: 70 NRTYACRYQGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVE 129
Query: 361 MHPYTKEVECQTEVXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXXXXXXNCLAMLPPN 540
MHPYTKEVECQTEV F NCLAMLPPN
Sbjct: 130 MHPYTKEVECQTEVSTISSHPTSPSTLPFVSSGSSICSVSSSCSSVSTVYSNCLAMLPPN 189
Query: 541 PSLPKYDYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATL 720
PSLPKYDYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATL
Sbjct: 190 PSLPKYDYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATL 249
Query: 721 PEVLQDFRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGV 900
PEVLQDFRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGV
Sbjct: 250 PEVLQDFRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGV 309
Query: 901 CYANGAYHPSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLP 1080
CYANGAYHPSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLP
Sbjct: 310 CYANGAYHPSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLP 369
Query: 1081 PKVSYASTHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNI 1260
PKVSYASTHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNI
Sbjct: 370 PKVSYASTHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNI 429
Query: 1261 ELSDVLHVMEVDQLITEAFDVHRPME 1338
ELSDVLHVMEVDQLITEAFDVHRPME
Sbjct: 430 ELSDVLHVMEVDQLITEAFDVHRPME 455
>gi|28275159|gb|AAO38653.1| Nuclear hormone receptor family protein
21, isoform a [Caenorhabditis elegans]
Length = 448
Score = 827 bits (2137), Expect = 0.0
Identities = 409/448 (91%), Positives = 410/448 (91%), Gaps = 2/448 (0%)
Frame = +1
Query: 1 MGPRSKSTMRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWK 180
MGPRSKSTMRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWK
Sbjct: 1 MGPRSKSTMRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWK 60
Query: 181 NRTYACRYQGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVE 360
NRTYACRYQGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVE
Sbjct: 61 NRTYACRYQGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVE 120
Query: 361 MHPYTKEVECQTEVXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXXXXXXNCLAMLPPN 540
MHPYTKEVECQTEV F NCLAMLPPN
Sbjct: 121 MHPYTKEVECQTEVSTISSHPTSPSTLPFVSSGSSICSVSSSCSSVSTVYSNCLAMLPPN 180
Query: 541 PSLPKYDYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATL 720
PSLPKYDYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATL
Sbjct: 181 PSLPKYDYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATL 240
Query: 721 PEVLQDFRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGV 900
PEVLQDFRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGV
Sbjct: 241 PEVLQDFRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGV 300
Query: 901 CYANGAYHPSDKRQQAFPDV--KGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYP 1074
CYANGAYHPSDKRQQAFPDV +GVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYP
Sbjct: 301 CYANGAYHPSDKRQQAFPDVNYRGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYP 360
Query: 1075 LPPKVSYASTHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSD 1254
LPPKVSYASTHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSD
Sbjct: 361 LPPKVSYASTHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSD 420
Query: 1255 NIELSDVLHVMEVDQLITEAFDVHRPME 1338
NIELSDVLHVMEVDQLITEAFDVHRPME
Sbjct: 421 NIELSDVLHVMEVDQLITEAFDVHRPME 448
>gi|25396656|pir||D88206 protein nhr-21.a [imported] - Caenorhabditis
elegans
Length = 438
Score = 818 bits (2112), Expect = 0.0
Identities = 402/438 (91%), Positives = 402/438 (91%)
Frame = +1
Query: 25 MRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWKNRTYACRY 204
MRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWKNRTYACRY
Sbjct: 1 MRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWKNRTYACRY 60
Query: 205 QGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVEMHPYTKEV 384
QGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVEMHPYTKEV
Sbjct: 61 QGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVEMHPYTKEV 120
Query: 385 ECQTEVXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXXXXXXNCLAMLPPNPSLPKYDY 564
ECQTEV F NCLAMLPPNPSLPKYDY
Sbjct: 121 ECQTEVSTISSHPTSPSTLPFVSSGSSICSVSSSCSSVSTVYSNCLAMLPPNPSLPKYDY 180
Query: 565 LLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATLPEVLQDFR 744
LLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATLPEVLQDFR
Sbjct: 181 LLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATLPEVLQDFR 240
Query: 745 RIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGVCYANGAYH 924
RIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGVCYANGAYH
Sbjct: 241 RIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGVCYANGAYH 300
Query: 925 PSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLPPKVSYAST 1104
PSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLPPKVSYAST
Sbjct: 301 PSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLPPKVSYAST 360
Query: 1105 HILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNIELSDVLHV 1284
HILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNIELSDVLHV
Sbjct: 361 HILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNIELSDVLHV 420
Query: 1285 MEVDQLITEAFDVHRPME 1338
MEVDQLITEAFDVHRPME
Sbjct: 421 MEVDQLITEAFDVHRPME 438
>gi|28275161|gb|AAO38655.1| Nuclear hormone receptor family protein
21, isoform c [Caenorhabditis elegans]
Length = 440
Score = 811 bits (2096), Expect = 0.0
Identities = 401/440 (91%), Positives = 402/440 (91%), Gaps = 2/440 (0%)
Frame = +1
Query: 25 MRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWKNRTYACRY 204
MRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWKNRTYACRY
Sbjct: 1 MRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWKNRTYACRY 60
Query: 205 QGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVEMHPYT--K 378
QGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVEMHPYT +
Sbjct: 61 QGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVEMHPYTNFR 120
Query: 379 EVECQTEVXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXXXXXXNCLAMLPPNPSLPKY 558
EVECQTEV F NCLAMLPPNPSLPKY
Sbjct: 121 EVECQTEVSTISSHPTSPSTLPFVSSGSSICSVSSSCSSVSTVYSNCLAMLPPNPSLPKY 180
Query: 559 DYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATLPEVLQD 738
DYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATLPEVLQD
Sbjct: 181 DYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATLPEVLQD 240
Query: 739 FRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGVCYANGA 918
FRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGVCYANGA
Sbjct: 241 FRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGVCYANGA 300
Query: 919 YHPSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLPPKVSYA 1098
YHPSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLPPKVSYA
Sbjct: 301 YHPSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLPPKVSYA 360
Query: 1099 STHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNIELSDVL 1278
STHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNIELSDVL
Sbjct: 361 STHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNIELSDVL 420
Query: 1279 HVMEVDQLITEAFDVHRPME 1338
HVMEVDQLITEAFDVHRPME
Sbjct: 421 HVMEVDQLITEAFDVHRPME 440
>gi|39582349|emb|CAE67598.1| Hypothetical protein CBG13142
[Caenorhabditis briggsae]
Length = 448
Score = 706 bits (1821), Expect = 0.0
Identities = 341/448 (76%), Positives = 383/448 (85%), Gaps = 2/448 (0%)
Frame = +1
Query: 1 MGPRSKSTMRLMSKDS-SQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIW 177
MGPR+K+TMRLMSK+ SQSLVANHKA++FCAVCGDTALGKHYGV ACNGCKGFFRRSIW
Sbjct: 4 MGPRAKTTMRLMSKEMPSQSLVANHKASIFCAVCGDTALGKHYGVNACNGCKGFFRRSIW 63
Query: 178 KNRTYACRYQGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSV 357
KNRTYACRYQGKCGVAKEQRNACR+CRL C++VGMNPRAVQGD ++++S+SPN+VS
Sbjct: 64 KNRTYACRYQGKCGVAKEQRNACRACRLTTCLRVGMNPRAVQGDTSDSASTSSSPNMVSY 123
Query: 358 EMHPYTKEVECQTEVXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXXXXXXNCLAM-LP 534
+ YTKE ECQTE+ F +C+A LP
Sbjct: 124 DSKIYTKEAECQTELSTISSHPTSPTNLPFASSASASASPCSSISTVHS---HCVATTLP 180
Query: 535 PNPSLPKYDYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIA 714
PNPSLPKYD+LL +L+RIFER DE++PEP PNTY FE+AFYNPH ICNRTKLTPTG+R+A
Sbjct: 181 PNPSLPKYDHLLMTLTRIFERCDENSPEPQPNTYCFEYAFYNPHCICNRTKLTPTGQRVA 240
Query: 715 TLPEVLQDFRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCP 894
TLPEVLQDFRRIFVLFTDVLSILPEFSRLD SDRMVLAKSRFSFFYWWLTCCWTAK GCP
Sbjct: 241 TLPEVLQDFRRIFVLFTDVLSILPEFSRLDASDRMVLAKSRFSFFYWWLTCCWTAKAGCP 300
Query: 895 GVCYANGAYHPSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYP 1074
GVCYANG+YHP DK+ QAFPDVKGVTELSVETVSKPLANI+ITDAE+L+GSVFAIFYE+P
Sbjct: 301 GVCYANGSYHPIDKQLQAFPDVKGVTELSVETVSKPLANIHITDAEILIGSVFAIFYEFP 360
Query: 1075 LPPKVSYASTHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSD 1254
LPP++SYAS+H+L+EARD YTQCMITVSPY+ E KSASRLAEISLIFSSITNLKYLTSD
Sbjct: 361 LPPRMSYASSHMLSEARDHYTQCMITVSPYAHSEVKSASRLAEISLIFSSITNLKYLTSD 420
Query: 1255 NIELSDVLHVMEVDQLITEAFDVHRPME 1338
NIELSDVLHVMEVDQL ++AFDVHRP++
Sbjct: 421 NIELSDVLHVMEVDQLFSDAFDVHRPID 448
>gi|32563896|ref|NP_495535.2| nuclear Hormone Receptor (44.9 kD)
(nhr-21) [Caenorhabditis elegans]
gi|25396657|pir||E88206 protein nhr-21b [imported] - Caenorhabditis
elegans
gi|4139094|gb|AAD03692.1| nuclear receptor NHR-21b [Caenorhabditis
elegans]
gi|28275160|gb|AAO38654.1| Nuclear hormone receptor family protein
21, isoform b [Caenorhabditis elegans]
Length = 400
Score = 667 bits (1722), Expect = 0.0
Identities = 333/373 (89%), Positives = 335/373 (89%), Gaps = 2/373 (0%)
Frame = +1
Query: 226 KEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVEMHPYT--KEVECQTE 399
K+QRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVEMHPYT +EVECQTE
Sbjct: 28 KQQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVEMHPYTNFREVECQTE 87
Query: 400 VXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXXXXXXNCLAMLPPNPSLPKYDYLLASL 579
V F NCLAMLPPNPSLPKYDYLLASL
Sbjct: 88 VSTISSHPTSPSTLPFVSSGSSICSVSSSCSSVSTVYSNCLAMLPPNPSLPKYDYLLASL 147
Query: 580 SRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATLPEVLQDFRRIFVL 759
SRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATLPEVLQDFRRIFVL
Sbjct: 148 SRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATLPEVLQDFRRIFVL 207
Query: 760 FTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGVCYANGAYHPSDKR 939
FTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGVCYANGAYHPSDKR
Sbjct: 208 FTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGVCYANGAYHPSDKR 267
Query: 940 QQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLPPKVSYASTHILNE 1119
QQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLPPKVSYASTHILNE
Sbjct: 268 QQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLPPKVSYASTHILNE 327
Query: 1120 ARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNIELSDVLHVMEVDQ 1299
ARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNIELSDVLHVMEVDQ
Sbjct: 328 ARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNIELSDVLHVMEVDQ 387
Query: 1300 LITEAFDVHRPME 1338
LITEAFDVHRPME
Sbjct: 388 LITEAFDVHRPME 400