Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F22D3_6
(1899 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|25147950|ref|NP_741018.1| C.Elegans Homeobox (ceh-38) [Caenor... 1008 0.0
gi|25147952|ref|NP_741017.1| C.Elegans Homeobox (ceh-38) [Caenor... 999 0.0
gi|7499644|pir||T16136 hypothetical protein F22D3.1 - Caenorhabd... 994 0.0
gi|39590263|emb|CAE66001.1| Hypothetical protein CBG11192 [Caeno... 680 0.0
gi|39580507|emb|CAE66508.1| Hypothetical protein CBG11796 [Caeno... 211 5e-53
gi|39580030|emb|CAE65644.1| Hypothetical protein CBG10702 [Caeno... 205 3e-51
gi|47551283|ref|NP_999824.1| ONECUT transcription factor HNF6 be... 192 3e-47
gi|48097252|ref|XP_391862.1| similar to ENSANGP00000015653 [Apis... 191 4e-47
gi|34733341|gb|AAQ81630.1| HNF6 beta [Strongylocentrotus purpura... 190 9e-47
gi|24638658|ref|NP_524842.2| CG1922-PA [Drosophila melanogaster]... 188 3e-46
gi|16197895|gb|AAL13705.1| GH28062p [Drosophila melanogaster] 188 3e-46
gi|6708088|gb|AAF25796.1| cut-homeodomain protein [Drosophila me... 187 6e-46
gi|3250876|emb|CAA75150.1| hepatocyte nuclear factor 6 beta [Rat... 186 2e-45
gi|39593454|emb|CAE61746.1| Hypothetical protein CBG05700 [Caeno... 186 2e-45
gi|41055714|ref|NP_956867.1| hypothetical protein MGC65904 [Dani... 185 4e-45
gi|42542744|gb|AAH66466.1| Unknown (protein for MGC:77450) [Dani... 184 8e-45
gi|49183028|gb|AAT57874.1| Hnf6 beta-a [Asterina miniata] 183 1e-44
gi|17538688|ref|NP_501046.1| one cut domain family member (51.5 ... 182 3e-44
gi|12083605|ref|NP_073162.1| one cut domain, family member 1; He... 182 3e-44
gi|6680241|ref|NP_032288.1| one cut domain, family member 1; hep... 182 3e-44
gi|24307887|ref|NP_004489.1| one cut domain, family member 1; he... 182 3e-44
gi|2224905|gb|AAB61705.1| hepatocyte nuclear factor 6 [Homo sapi... 179 2e-43
gi|34862728|ref|XP_345794.1| similar to onecut 3 [Rattus norvegi... 178 5e-43
gi|20373113|gb|AAL86921.1| onecut 3 [Mus musculus] 178 5e-43
gi|40538836|ref|NP_631972.2| one cut domain, family member 3 [Mu... 178 5e-43
gi|4758848|ref|NP_004843.1| one cut domain, family member 2; one... 176 1e-42
gi|34850744|ref|NP_919244.1| one cut domain, family member 2; tr... 176 1e-42
gi|41151054|ref|XP_372702.1| similar to onecut 3 [Homo sapiens] 176 2e-42
gi|17999893|gb|AAL02365.1| onecut homeodomain protein [Danio rerio] 175 4e-42
gi|10566821|dbj|BAB15952.1| HrHNF-6 [Halocynthia roretzi] 173 1e-41
gi|47213722|emb|CAF95153.1| unnamed protein product [Tetraodon n... 167 6e-40
gi|49183030|gb|AAT57875.1| Hnf6 beta-b [Asterina miniata] 167 1e-39
gi|25148837|ref|NP_508341.2| C.Elegans Homeobox, onecut bifuncti... 166 2e-39
gi|7511556|pir||T28912 probable homeobox protein - Caenorhabditi... 166 2e-39
gi|17551242|ref|NP_508342.1| C.Elegans Homeobox (44.3 kD) (ceh-3... 158 5e-37
gi|47228342|emb|CAG07737.1| unnamed protein product [Tetraodon n... 148 5e-34
gi|47217875|emb|CAG02368.1| unnamed protein product [Tetraodon n... 143 1e-32
gi|39588125|emb|CAE68049.1| Hypothetical protein CBG13668 [Caeno... 140 8e-32
gi|39584589|emb|CAE72342.1| Hypothetical protein CBG19488 [Caeno... 139 2e-31
gi|39592365|emb|CAE63442.1| Hypothetical protein CBG07897 [Caeno... 137 7e-31
gi|7494562|pir||T42240 cut repeat homeobox protein - Caenorhabdi... 134 1e-29
gi|39588274|emb|CAE68199.1| Hypothetical protein CBG13865 [Caeno... 131 6e-29
gi|39584590|emb|CAE72343.1| Hypothetical protein CBG19489 [Caeno... 130 8e-29
gi|39588273|emb|CAE68198.1| Hypothetical protein CBG13862 [Caeno... 115 4e-24
gi|34932155|ref|XP_225875.2| similar to One cut domain family me... 113 1e-23
gi|50776754|ref|XP_427331.1| PREDICTED: similar to one cut domai... 112 2e-23
gi|47198560|emb|CAF87207.1| unnamed protein product [Tetraodon n... 112 3e-23
gi|5514674|emb|CAB50769.1| hepatocyte nuclear factor 6 [Homo sap... 112 4e-23
gi|39584600|emb|CAE72353.1| Hypothetical protein CBG19500 [Caeno... 103 2e-20
gi|47206865|emb|CAF90521.1| unnamed protein product [Tetraodon n... 94 1e-17
gi|2198820|gb|AAD12485.1| Cux/CDP(1B1); Cux/CDP homeoprotein [Mu... 89 5e-16
gi|1790882|gb|AAB41146.1| cut-related homeobox Cux-1 [Mus musculus] 89 5e-16
gi|729093|sp|P39881|CUT1_CANFA CCAAT displacement protein (Homeo... 89 5e-16
gi|34871708|ref|XP_341054.1| CCAAT displacement protein [Rattus ... 89 5e-16
gi|2137246|pir||I48314 homeotic protein CDP - mouse >gnl|BL_ORD_... 89 5e-16
gi|34873366|ref|XP_347164.1| similar to Cux/CDP(1B1); Cux/CDP ho... 89 5e-16
gi|13637900|sp|P53564|CUT1_MOUSE CCAAT displacement protein (CDP... 89 5e-16
gi|1705737|sp|P53565|CUT1_RAT CCAAT displacement protein (CDP) (... 89 5e-16
gi|38348586|ref|NP_034116.2| CCAAT displacement protein isoform ... 89 5e-16
gi|1524390|gb|AAC52775.1| Cux-1 [Mus musculus] 89 5e-16
gi|50752928|ref|XP_425070.1| PREDICTED: similar to one cut domai... 87 1e-15
gi|31204295|ref|XP_311096.1| ENSANGP00000017408 [Anopheles gambi... 87 1e-15
gi|31652240|ref|NP_853530.1| CCAAT displacement protein isoform ... 86 2e-15
gi|729094|sp|P39880|CUT1_HUMAN CCAAT displacement protein (CDP) ... 86 2e-15
gi|42793995|gb|AAH66592.1| CUTL1 protein [Homo sapiens] 86 2e-15
gi|7499299|pir||T31711 hypothetical protein F17A9.6 - Caenorhabd... 84 1e-14
gi|17559806|ref|NP_504581.1| one cut domain family member (36.1 ... 84 1e-14
gi|48096128|ref|XP_394613.1| similar to Homeobox protein cut [Ap... 83 3e-14
gi|34872409|ref|XP_222184.2| similar to Cux-2 [Rattus norvegicus] 82 5e-14
gi|47224998|emb|CAF97413.1| unnamed protein product [Tetraodon n... 81 8e-14
gi|13626177|sp|P70298|CUT2_MOUSE Homeobox protein Cux-2 (Cut-lik... 81 1e-13
gi|40789277|ref|NP_031830.2| cut-like 2 [Mus musculus] >gnl|BL_O... 81 1e-13
gi|42660089|ref|XP_027045.11| cut-like 2 [Homo sapiens] 80 1e-13
gi|20141312|sp|O14529|CUT2_HUMAN Homeobox protein Cux-2 (Cut-lik... 80 1e-13
gi|47205652|emb|CAF92200.1| unnamed protein product [Tetraodon n... 80 1e-13
gi|3165407|gb|AAC17602.1| fos37502_1 [Homo sapiens] 80 2e-13
gi|39598351|emb|CAE69044.1| Hypothetical protein CBG15050 [Caeno... 78 7e-13
gi|17864374|ref|NP_524764.1| CG11387-PA [Drosophila melanogaster... 77 1e-12
gi|39598348|emb|CAE69041.1| Hypothetical protein CBG15047 [Caeno... 75 7e-12
gi|47217555|emb|CAG02482.1| unnamed protein product [Tetraodon n... 74 1e-11
gi|17556164|ref|NP_497576.1| C.Elegans Homeobox (ceh-44) [Caenor... 71 8e-11
gi|39583507|emb|CAE73965.1| Hypothetical protein CBG21591 [Caeno... 70 2e-10
gi|39583505|emb|CAE73963.1| Hypothetical protein CBG21589 [Caeno... 69 3e-10
gi|39583503|emb|CAE73961.1| Hypothetical protein CBG21587 [Caeno... 67 2e-09
gi|39590641|emb|CAE65011.1| Hypothetical protein CBG09849 [Caeno... 65 4e-09
gi|39588276|emb|CAE72627.1| Hypothetical protein CBG19824 [Caeno... 63 3e-08
gi|50758470|ref|XP_425393.1| PREDICTED: similar to CCAAT displac... 60 2e-07
gi|39584598|emb|CAE72351.1| Hypothetical protein CBG19497 [Caeno... 58 9e-07
gi|50756437|ref|XP_415167.1| PREDICTED: similar to Homeobox prot... 57 2e-06
gi|47184007|emb|CAG14149.1| unnamed protein product [Tetraodon n... 51 9e-05
gi|6677851|ref|NP_033148.1| special AT-rich sequence binding pro... 51 1e-04
gi|34874287|ref|XP_236849.2| similar to Satb1 protein [Rattus no... 49 3e-04
gi|15029818|gb|AAH11132.1| Satb1 protein [Mus musculus] >gnl|BL_... 49 3e-04
gi|4506791|ref|NP_002962.1| special AT-rich sequence binding pro... 49 4e-04
gi|1762771|gb|AAB88393.1| homeodomain-containing protein [Pleuro... 48 7e-04
gi|19115064|ref|NP_594152.1| putative GTPase activating protein ... 47 0.002
gi|50732752|ref|XP_418746.1| PREDICTED: similar to DNA-binding p... 46 0.003
gi|50795309|ref|XP_423768.1| PREDICTED: hepatic lectin, partial ... 44 0.010
gi|39586785|emb|CAE65827.1| Hypothetical protein CBG10948 [Caeno... 44 0.010
gi|47206964|emb|CAF90481.1| unnamed protein product [Tetraodon n... 44 0.010
gi|47220025|emb|CAG12173.1| unnamed protein product [Tetraodon n... 44 0.014
gi|47480835|gb|AAH69588.1| LMX1B protein [Homo sapiens] 43 0.023
gi|3046880|gb|AAC13544.1| LIM-homeodomain protein LMX1B/LMX1.2 [... 43 0.023
gi|29500723|gb|AAO74860.1| LMX1B [Canis familiaris] 43 0.023
gi|4505007|ref|NP_002307.1| LIM homeobox transcription factor 1,... 43 0.023
gi|6754562|ref|NP_034855.1| LIM homeobox transcription factor 1 ... 43 0.023
gi|8247930|sp|O60663|LMXB_HUMAN LIM homeobox transcription facto... 43 0.023
gi|547859|sp|Q04650|LMXA_MESAU LIM homeobox transcription factor... 43 0.030
gi|17298670|ref|NP_387501.1| LIM homeobox transcription factor 1... 43 0.030
gi|28893581|ref|NP_796372.1| LIM homeobox transcription factor 1... 43 0.030
gi|34880906|ref|XP_222902.2| similar to lim homeodomain-containi... 43 0.030
gi|2497672|sp|Q60564|LMXB_MESAU LIM homeobox transcription facto... 43 0.030
gi|45382493|ref|NP_990689.1| homeodomain protein (lmx) [Gallus g... 42 0.052
gi|1145814|gb|AAA84995.1| LIM homeodomain protein 42 0.052
gi|38075905|ref|XP_138962.3| paired homeodomain protein DRG11 [M... 42 0.052
gi|49659006|emb|CAD37944.1| homeobox protein LHX [Suberites domu... 42 0.052
gi|47222219|emb|CAG11098.1| unnamed protein product [Tetraodon n... 42 0.068
gi|20982839|ref|NP_631885.1| two cut domains-containing homeodom... 41 0.088
gi|38016202|ref|NP_056080.1| SATB family member 2; two cut domai... 41 0.088
gi|5689405|dbj|BAA82986.1| KIAA1034 protein [Homo sapiens] 41 0.088
gi|37360204|dbj|BAC98080.1| mKIAA1034 protein [Mus musculus] 41 0.088
gi|17551246|ref|NP_508340.1| C.Elegans Homeobox (ceh-41) [Caenor... 41 0.12
gi|25395229|pir||H87721 protein ZC123.2 [imported] - Caenorhabdi... 41 0.12
gi|47212495|emb|CAG12709.1| unnamed protein product [Tetraodon n... 41 0.12
gi|31238747|ref|XP_319836.1| ENSANGP00000005230 [Anopheles gambi... 41 0.12
gi|17510965|ref|NP_490781.1| ZFH-2 (1B307) [Caenorhabditis elega... 41 0.12
gi|45822213|emb|CAE83645.1| engrailed protein [Glomeris marginata] 40 0.15
gi|16974694|gb|AAL32444.1| LIM homeobox protein 1b [Xenopus laevis] 40 0.15
gi|19919275|gb|AAM08227.1| engrailed-1 [Scyliorhinus canicula] 40 0.20
gi|5739138|gb|AAD50359.1| engrailed-related 2 protein [Thermobia... 40 0.20
gi|46125439|ref|XP_387273.1| hypothetical protein FG07097.1 [Gib... 40 0.20
gi|21955176|ref|NP_665710.1| paired-like homeodomain trancriptio... 40 0.20
gi|47225657|emb|CAG08000.1| unnamed protein product [Tetraodon n... 40 0.20
gi|47207631|emb|CAF93666.1| unnamed protein product [Tetraodon n... 40 0.20
gi|49086648|ref|XP_405354.1| hypothetical protein AN1217.2 [Aspe... 40 0.20
gi|47218777|emb|CAG02763.1| unnamed protein product [Tetraodon n... 40 0.26
gi|48111469|ref|XP_396301.1| similar to CG32105-PB [Apis mellifera] 40 0.26
gi|26553708|ref|NP_757642.1| conserved hypothetical protein [Myc... 40 0.26
gi|41151004|ref|XP_297205.3| hypothetical protein XP_297205 [Hom... 40 0.26
gi|50750238|ref|XP_421919.1| PREDICTED: similar to KIAA1034-like... 40 0.26
gi|24585132|ref|NP_724161.1| CG10699-PB [Drosophila melanogaster... 39 0.34
gi|4106560|gb|AAD02889.1| LIM homeodomain transcription factor [... 39 0.34
gi|17136270|ref|NP_476606.1| CG10699-PA [Drosophila melanogaster... 39 0.34
gi|47206484|emb|CAF91851.1| unnamed protein product [Tetraodon n... 39 0.34
gi|1772909|gb|AAB40144.1| engrailed protein [Branchiostoma flori... 39 0.34
gi|28316900|gb|AAO39472.1| RE70568p [Drosophila melanogaster] 39 0.34
gi|47219374|emb|CAG01537.1| unnamed protein product [Tetraodon n... 39 0.34
gi|47230584|emb|CAF99777.1| unnamed protein product [Tetraodon n... 39 0.44
gi|18858205|ref|NP_572505.1| CG11354-PA [Drosophila melanogaster... 39 0.44
gi|16151211|gb|AAL13136.1| homeodomain protein engrailed [Striga... 39 0.44
gi|20138668|sp|Q969G2|LHX4_HUMAN LIM/homeobox protein Lhx4 >gnl|... 39 0.44
gi|7110669|ref|NP_034842.1| LIM homeobox protein 4; LIM homeo bo... 39 0.44
gi|21668482|dbj|BAC01272.1| LIM homeobox protein 4 [Homo sapiens] 39 0.44
gi|20339337|gb|AAM19349.1| LIM homeobox protein [Homo sapiens] 39 0.44
gi|20849973|ref|XP_136623.1| similar to KIAA1034-like DNA bindin... 39 0.44
gi|2149584|gb|AAC53336.1| LIM-homeobox protein [Mus musculus] 39 0.44
gi|1346791|sp|P48786|PRH_PETCR Pathogenesis-related homeodomain ... 39 0.44
gi|15375314|ref|NP_203129.1| LIM homeobox protein 4 [Homo sapien... 39 0.44
gi|18026224|gb|AAL07260.1| LIM homeodomain protein [Homo sapiens] 39 0.44
gi|29437129|gb|AAH49834.1| Lhx4 protein [Mus musculus] 39 0.44
gi|34882072|ref|XP_222571.2| similar to engrailed protein [Rattu... 39 0.57
gi|39585891|emb|CAE61305.1| Hypothetical protein CBG05139 [Caeno... 39 0.57
gi|19173020|ref|NP_597571.1| similarity with homeobox domain-con... 39 0.57
gi|2497673|sp|Q25132|LIM_HALRO LIM/homeobox protein LIM (HRLIM) ... 39 0.57
gi|48098689|ref|XP_394135.1| similar to CG10699-PA [Apis mellifera] 39 0.57
gi|31201131|ref|XP_309513.1| ENSANGP00000012536 [Anopheles gambi... 39 0.57
gi|23612608|ref|NP_704169.1| hypothetical protein [Plasmodium fa... 39 0.57
gi|39585890|emb|CAE61304.1| Hypothetical protein CBG05137 [Caeno... 39 0.57
gi|41152054|ref|NP_958442.1| POU domain, class 4, transcription ... 38 0.75
gi|27807477|ref|NP_777192.1| visual system homeobox 1 protein [B... 38 0.75
gi|1708255|sp|P31538|HMEB_XENLA Homeobox protein engrailed-1B (E... 38 0.75
gi|20502369|dbj|BAB91364.1| LIM homeodomain protein [Branchiosto... 38 0.75
gi|6678688|ref|NP_032524.1| LIM homeobox protein 1; LIM homeo bo... 38 0.75
gi|7657303|ref|NP_055379.1| LIM homeobox protein 3 isoform b; LI... 38 0.75
gi|25453086|sp|O97581|LHX3_PIG LIM/homeobox protein Lhx3 (Homeob... 38 0.75
gi|9971753|gb|AAG10399.1| lim-homeobox transcription factor LHX3... 38 0.75
gi|30023847|ref|NP_835258.1| LIM homeobox protein 3 isoform a; L... 38 0.75
gi|46394864|gb|AAS91588.1| Lim1 [Oryctolagus cuniculus] 38 0.75
gi|31204737|ref|XP_311317.1| ENSANGP00000017421 [Anopheles gambi... 38 0.75
gi|39594121|emb|CAE70231.1| Hypothetical protein CBG16718 [Caeno... 38 0.75
gi|26327877|dbj|BAC27679.1| unnamed protein product [Mus musculus] 38 0.75
gi|6572499|gb|AAF17291.1| LHX3 protein [Homo sapiens] >gnl|BL_OR... 38 0.75
gi|1170320|sp|P21711|MIX1_XENLA Homeobox protein MIX.1 >gnl|BL_O... 38 0.98
gi|24663246|ref|NP_648567.1| CG4328-PA [Drosophila melanogaster]... 38 0.98
gi|13123144|gb|AAK12794.1| RNA polymerase II largest subunit [He... 38 0.98
gi|13123200|gb|AAK12818.1| RNA polymerase II largest subunit [Sa... 38 0.98
gi|669105|emb|CAA68361.1| homeobox protein En-1 [Mus musculus] 38 0.98
gi|7106305|ref|NP_034263.1| engrailed 1; engrailed-1 [Mus muscul... 38 0.98
gi|6678690|ref|NP_032525.1| LIM homeobox protein 5; LIM homeo bo... 38 0.98
gi|11641283|ref|NP_071758.1| LIM homeobox protein 5 [Homo sapien... 38 0.98
gi|598327|gb|AAB64178.1| homeodomain protein [Mus musculus] 38 0.98
gi|48097442|ref|XP_393785.1| similar to zinc-finger homeodomain ... 38 0.98
gi|2245514|gb|AAB62538.1| class IV POU protein [Herdmania curvata] 38 0.98
gi|32402495|gb|AAP79290.2| lim 1/5 [Saccoglossus kowalevskii] 38 0.98
gi|6754540|ref|NP_034841.1| LIM homeobox protein 3; LIM homeo bo... 38 0.98
gi|1708829|sp|P50481|LHX3_MOUSE LIM/homeobox protein Lhx3 (Homeo... 38 0.98
gi|39596298|emb|CAE69936.1| Hypothetical protein CBG16312 [Caeno... 38 0.98
gi|7710119|ref|NP_001417.2| engrailed homolog 1 [Homo sapiens] >... 38 0.98
gi|17568919|ref|NP_508204.1| LIM domain protein (lim-6) [Caenorh... 37 1.3
gi|7494635|pir||T34326 homeobox and LIM domain protein lim-6 - C... 37 1.3
gi|39592499|emb|CAE63576.1| Hypothetical protein CBG08064 [Caeno... 37 1.3
gi|34850031|gb|AAC69042.3| Lim domain family protein 6 [Caenorha... 37 1.3
gi|15706308|dbj|BAB68342.1| Cs-LHX3 [Ciona savignyi] 37 1.3
gi|18858977|ref|NP_571293.1| LIM homeobox 5; LIM homeobox protei... 37 1.3
gi|34851684|ref|XP_344757.1| POU domain, class 4, transcription ... 37 1.7
gi|50757173|ref|XP_415412.1| PREDICTED: similar to amino acid fe... 37 1.7
gi|4758948|ref|NP_004566.1| POU domain, class 4, transcription f... 37 1.7
gi|34852858|ref|XP_345112.1| similar to double homeobox, 4; doub... 37 1.7
gi|42658055|ref|XP_376652.1| distal-less homeo box 6 [Homo sapie... 37 1.7
gi|22023900|gb|AAM89249.1| class IV POU-domain transcription fac... 37 1.7
gi|312469|emb|CAA50589.1| Brn-3b [Homo sapiens] 37 1.7
gi|28932878|gb|AAO60106.1| neuronal transcription factor BRN3a s... 37 1.7
gi|544929|gb|AAB29705.1| class IV POU transcription factor gene ... 37 1.7
gi|544926|gb|AAB29703.1| class IV POU transcription factor gene ... 37 1.7
gi|20127495|ref|NP_006228.2| POU domain, class 4, transcription ... 37 1.7
gi|543192|pir||A49642 transcription factor Brn-3 - mouse >gnl|BL... 37 1.7
gi|34874624|ref|XP_341373.1| POU domain, class 4, transcription ... 37 1.7
gi|32815064|gb|AAP34392.1| POU domain transcription factor Brn3b... 37 1.7
gi|45382269|ref|NP_990744.1| domesticus (clone 2.3 kB) lim-1 [Ga... 37 1.7
gi|50746811|ref|XP_426293.1| PREDICTED: similar to POU domain, c... 37 1.7
gi|1708831|sp|P37137|LHX5_XENLA LIM/homeobox protein Lhx5 (Homeo... 37 1.7
gi|30410785|ref|NP_005559.2| LIM homeobox protein 1 [Homo sapiens] 37 1.7
gi|47086419|ref|NP_997972.1| POU domain, class 4, transcription ... 37 1.7
gi|2506535|sp|Q01851|PO41_HUMAN POU domain, class 4, transcripti... 37 1.7
gi|47059067|ref|NP_620394.2| POU domain, class 4, transcription ... 37 1.7
gi|602106|gb|AAA57161.1| POU domain factor >gnl|BL_ORD_ID|595023... 37 1.7
gi|7446285|pir||S78452 POU-domain protein rdc-1 - human >gnl|BL_... 37 1.7
gi|31239353|ref|XP_320090.1| ENSANGP00000018404 [Anopheles gambi... 37 1.7
gi|1083240|pir||S41512 Brn-3b protein - mouse 37 1.7
gi|1705502|sp|P17208|PO41_MOUSE POU domain, class 4, transcripti... 37 1.7
gi|11066192|gb|AAG28492.1| class IV POU-homeodomain protein [Xen... 37 1.7
gi|1083239|pir||S41511 Brn-3a protein - mouse 37 1.7
gi|546434|gb|AAB30578.1| BRN-3b [Mus musculus] 37 1.7
gi|1708828|sp|P53412|LHX3_CHICK LIM/homeobox protein Lhx3 (Homeo... 37 1.7
gi|547856|sp|P36200|LHX3_XENLA LIM/homeobox protein Lhx3 (Homeob... 37 1.7
gi|38076631|ref|XP_135366.3| POU domain, class 4, transcription ... 37 1.7
gi|47218680|emb|CAG12404.1| unnamed protein product [Tetraodon n... 37 1.7
gi|47217359|emb|CAG11064.1| unnamed protein product [Tetraodon n... 37 1.7
gi|18308156|gb|AAL67847.1| LIM homeobox protein [Gallus gallus] 37 1.7
gi|34879351|ref|XP_344676.1| similar to POU domain, class 4, tra... 37 2.2
gi|13123123|gb|AAK12785.1| RNA polymerase II largest subunit [Di... 37 2.2
gi|45382097|ref|NP_990090.1| POU domain, class 4, transcription ... 37 2.2
gi|47222232|emb|CAG11111.1| unnamed protein product [Tetraodon n... 37 2.2
gi|39594078|emb|CAE70188.1| Hypothetical protein CBG16662 [Caeno... 37 2.2
gi|45360969|ref|NP_988848.1| paired-like homeodomain transcripti... 37 2.2
gi|544932|gb|AAB29707.1| class IV POU transcription factor gene ... 37 2.2
gi|1083241|pir||S41513 Brn-3c protein - mouse 37 2.2
gi|44888517|sp|Q8MIE6|TGLX_HYLLA Homeobox protein TGIF2LX (TGFB-... 37 2.2
gi|17555412|ref|NP_498796.1| UNCoordinated locomotion UNC-86, ab... 37 2.2
gi|5502|emb|CAA44264.1| YOX 1 [Saccharomyces cerevisiae] 37 2.2
gi|30677923|ref|NP_178252.2| homeobox-leucine zipper protein 17 ... 37 2.2
gi|18858975|ref|NP_571283.1| LIM homeobox 3; LIM homeobox protei... 37 2.2
gi|17555410|ref|NP_498795.1| UNCoordinated locomotion UNC-86, PO... 37 2.2
gi|2641222|gb|AAB86860.1| homeobox protein LIM-3 [Danio rerio] 37 2.2
gi|21070954|ref|NP_620395.1| POU domain, class 4, transcription ... 37 2.2
gi|4505965|ref|NP_002691.1| POU domain, class 4, transcription f... 37 2.2
gi|543193|pir||B49642 POU-domain protein Brn-3.1 - mouse >gnl|BL... 37 2.2
gi|2981019|gb|AAC06203.1| transcription factor POU4F3 [Homo sapi... 37 2.2
gi|25386214|pir||F84424 probable homeodomain transcription facto... 37 2.2
gi|32455922|ref|NP_862379.1| putative replication initiation pro... 37 2.2
gi|8248965|gb|AAC60669.2| lateral and intermediate mesoderm diff... 36 2.8
gi|39595203|emb|CAE60240.1| Hypothetical protein CBG03813 [Caeno... 36 2.8
gi|13123221|gb|AAK12827.1| RNA polymerase II largest subunit [Tr... 36 2.8
gi|13123116|gb|AAK12782.1| RNA polymerase II largest subunit [De... 36 2.8
gi|50257124|gb|EAL19839.1| hypothetical protein CNBG1320 [Crypto... 36 2.8
gi|47228451|emb|CAG05271.1| unnamed protein product [Tetraodon n... 36 2.8
gi|31127028|gb|AAF26643.2| RNA polymerase II largest subunit [Ni... 36 2.8
gi|10441360|gb|AAG17008.1| class IV POU-homeodomain protein [Xen... 36 2.8
gi|47219259|emb|CAG11721.1| unnamed protein product [Tetraodon n... 36 2.8
gi|267419|sp|P29674|LHX1_XENLA LIM/homeobox protein Lhx1 (Homeob... 36 2.8
gi|47551255|ref|NP_999810.1| Lim homeodomain transcription facto... 36 2.8
gi|10257388|dbj|BAB13725.1| transcription factor HpLim1 [Hemicen... 36 2.8
gi|37789883|gb|AAP04274.1| ScLim1 [Scyliorhinus canicula] 36 2.8
gi|13123228|gb|AAK12830.1| RNA polymerase II largest subunit [Ta... 36 3.7
gi|31198137|ref|XP_308016.1| ENSANGP00000024995 [Anopheles gambi... 36 3.7
gi|31198135|ref|XP_308015.1| ENSANGP00000019474 [Anopheles gambi... 36 3.7
gi|37496907|emb|CAE46753.1| putative transcription factor [Platy... 36 3.7
gi|34853670|ref|XP_342420.1| LIM homeobox transcription factor 1... 36 3.7
gi|48098679|ref|XP_394134.1| similar to CG9151-PA [Apis mellifera] 36 3.7
gi|49617178|gb|AAT67384.1| homeobox gene 16 [Caenorhabditis eleg... 36 3.7
gi|18858979|ref|NP_571282.1| LIM homeobox 1b; LIM homeobox prote... 36 3.7
gi|47224946|emb|CAG06516.1| unnamed protein product [Tetraodon n... 36 3.7
gi|17864538|ref|NP_524876.1| CG9151-PA [Drosophila melanogaster]... 36 3.7
gi|6323614|ref|NP_013685.1| Homeodomain-containing transcription... 36 3.7
gi|16924186|gb|AAK26109.2| class IV POU transcription factor [Ha... 36 3.7
gi|27715523|ref|XP_233320.1| similar to paired-like homeobox pro... 36 3.7
gi|18858973|ref|NP_571291.1| LIM homeobox 1a; LIM homeobox prote... 36 3.7
gi|17552736|ref|NP_498898.1| C.Elegans Homeobox (ceh-16) [Caenor... 36 3.7
gi|39594830|emb|CAE70698.1| Hypothetical protein CBG17430 [Caeno... 36 3.7
gi|32404564|ref|XP_322895.1| hypothetical protein [Neurospora cr... 35 4.8
gi|6166235|sp|P24350|IPOU_DROME Inhibitory POU protein (I-POU) (... 35 4.8
gi|85156|pir||S14795 transcription factor I-POU - fruit fly (Dro... 35 4.8
gi|13123095|gb|AAK12773.1| RNA polymerase II largest subunit [As... 35 4.8
gi|13123186|gb|AAK12812.1| RNA polymerase II largest subunit [Ph... 35 4.8
gi|13123015|gb|AAK12739.1| RNA polymerase II largest subunit [Od... 35 4.8
gi|20975760|gb|AAM33142.1| engrailed [Patella vulgata] 35 4.8
gi|454293|gb|AAA31105.1| POU domain region; homolog of mouse brn-3 35 4.8
gi|7511466|pir||T34266 LIM homeobox protein ceh-14 - Caenorhabdi... 35 4.8
gi|3445438|emb|CAA07503.1| homeobox protein [Cupiennius salei] 35 4.8
gi|24642153|ref|NP_727845.1| CG9151-PB [Drosophila melanogaster]... 35 4.8
gi|50415362|gb|AAH77517.1| Unknown (protein for MGC:82772) [Xeno... 35 4.8
gi|17551226|ref|NP_509273.1| C.Elegans Homeobox, Eukaryotic neur... 35 4.8
gi|31234822|ref|XP_319123.1| ENSANGP00000012403 [Anopheles gambi... 35 4.8
gi|33146671|dbj|BAC80017.1| putative glycosyl transferase protei... 35 6.3
gi|13924876|gb|AAK49167.1| engrailed 1 [Procambarus clarkii] 35 6.3
gi|13924870|gb|AAK49165.1| engrailed [Porcellio scaber] 35 6.3
gi|45382115|ref|NP_990100.1| homeobox protein Chx10-1 [Gallus ga... 35 6.3
gi|47226924|emb|CAG05816.1| unnamed protein product [Tetraodon n... 35 6.3
gi|1173442|sp|P42571|PO23_RAT POU domain, class 2, transcription... 35 6.3
gi|476876|pir||A46216 transcription factor Skn-1, splice form a ... 35 6.3
gi|34863194|ref|XP_343379.1| similar to POU domain, class 2, tra... 35 6.3
gi|47933422|gb|AAT39335.1| distal-less [Oikopleura dioica] 35 6.3
gi|7415618|dbj|BAA93462.1| homeobox protein PpHB3 [Physcomitrell... 35 6.3
gi|32250699|gb|AAP74561.1| engrailed [Patiriella exigua] 35 6.3
gi|28201861|sp|Q9UKI9|PO23_HUMAN POU domain, class 2, transcript... 35 6.3
gi|6002919|gb|AAF00199.1| Skn-1a/Epoc-1/Oct-11 POU transcription... 35 6.3
gi|5123781|emb|CAB45383.1| PLA-1 protein [Homo sapiens] 35 6.3
gi|7657409|ref|NP_055167.1| POU transcription factor [Homo sapie... 35 6.3
gi|477686|pir||B46216 transcription factor Skn-1, splice form i ... 35 6.3
gi|34865611|ref|XP_234179.2| similar to NK2 homeodomain transcri... 35 6.3
gi|18858551|ref|NP_571386.1| distal-less homeobox gene 2a [Danio... 35 8.3
gi|38083683|ref|XP_355743.1| distal-less homeobox 6 [Mus musculus] 35 8.3
gi|31224425|ref|XP_317438.1| ENSANGP00000023635 [Anopheles gambi... 35 8.3
gi|19074300|ref|NP_585806.1| putative zinc finger protein (homeo... 35 8.3
gi|13123207|gb|AAK12821.1| RNA polymerase II largest subunit [Sc... 35 8.3
gi|5739136|gb|AAD50358.1| engrailed-related 1 protein [Thermobia... 35 8.3
gi|48137604|ref|XP_396800.1| similar to ribosomal protein S18 [A... 35 8.3
gi|34852856|ref|XP_228242.2| similar to putative homeobox protei... 35 8.3
gi|46048829|ref|NP_990343.1| homeodomain-containing protein; ant... 35 8.3
gi|14585689|gb|AAK67707.1| engrailed [Chaetopterus sp. SPIM-2001] 35 8.3
gi|2811015|sp|O02491|HMEN_ANOGA Segmentation polarity homeobox p... 35 8.3
gi|24648547|ref|NP_650921.1| CG15696-PA [Drosophila melanogaster... 35 8.3
gi|2696705|dbj|BAA24005.1| the nucleotide sequence of goosecoid ... 35 8.3
gi|6014979|sp|P70397|DLX6_MOUSE Homeobox protein DLX-6 >gnl|BL_O... 35 8.3
gi|38101582|gb|EAA48526.1| hypothetical protein MG00184.4 [Magna... 35 8.3
gi|39579424|emb|CAE56361.1| Hypothetical protein CBG24035 [Caeno... 35 8.3
gi|214245|gb|AAA49744.1| homeobox gene; putative 35 8.3
gi|41327243|gb|AAS00123.1| X-linked TGIF-like protein [Saimiri s... 35 8.3
gi|1708049|sp|P29454|GSCA_XENLA Homeobox protein goosecoid isofo... 35 8.3
gi|280665|pir||B42768 homeotic protein goosecoid - African clawe... 35 8.3
gi|1708050|sp|P53546|GSCB_XENLA Homeobox protein goosecoid isofo... 35 8.3
gi|1705494|sp|P53771|BOX5_NOTVI Homeobox protein box-5 (NVHBOX-5... 35 8.3
gi|1684909|gb|AAB36556.1| transcription factor homolog [Triboliu... 35 8.3
gi|49245972|gb|AAT58226.1| homeodomain transcription factor DLX6... 35 8.3
>gi|25147950|ref|NP_741018.1| C.Elegans Homeobox (ceh-38)
[Caenorhabditis elegans]
gi|13592398|gb|AAK31496.1| C.elegans homeobox protein 38, isoform a
[Caenorhabditis elegans]
Length = 632
Score = 1008 bits (2606), Expect = 0.0
Identities = 515/632 (81%), Positives = 515/632 (81%)
Frame = +1
Query: 1 MESSRTAATSTNGTEKSRRRNTDYLQIDPSSTFINNTGRGFAEELPENFLDXXXXXXXXX 180
MESSRTAATSTNGTEKSRRRNTDYLQIDPSSTFINNTGRGFAEELPENFLD
Sbjct: 1 MESSRTAATSTNGTEKSRRRNTDYLQIDPSSTFINNTGRGFAEELPENFLDTISPHPITP 60
Query: 181 XXXXXXXXXXXXXXXXXXXXQLASLXXXXXXXXXXXXXXXXXXXXXXXYETIKNEPEFSG 360
QLASL YETIKNEPEFSG
Sbjct: 61 SASTSSATSATEEPATSSAPQLASLAPMSMSSEQPSSSFSSASLLSSSYETIKNEPEFSG 120
Query: 361 STAGLLSPLHVDSRRRESHDFNTSPYIKEEEDLDGSHLLMGGIRPDTPTNDRSTDLGSIS 540
STAGLLSPLHVDSRRRESHDFNTSPYIKEEEDLDGSHLLMGGIRPDTPTNDRSTDLGSIS
Sbjct: 121 STAGLLSPLHVDSRRRESHDFNTSPYIKEEEDLDGSHLLMGGIRPDTPTNDRSTDLGSIS 180
Query: 541 SLLNEDHHTNTIGQSPSPRSTFGSDPTPMIQRQLIKNEDGVSPGSMGFSKNHQGYQKPRN 720
SLLNEDHHTNTIGQSPSPRSTFGSDPTPMIQRQLIKNEDGVSPGSMGFSKNHQGYQKPRN
Sbjct: 181 SLLNEDHHTNTIGQSPSPRSTFGSDPTPMIQRQLIKNEDGVSPGSMGFSKNHQGYQKPRN 240
Query: 721 GDRMEYEKAPYQRSLLNQALXXXXXXXXXXXXXXXXXXXAHIAQPRRIYSTQDSNDPLNA 900
GDRMEYEKAPYQRSLLNQAL AHIAQPRRIYSTQDSNDPLNA
Sbjct: 241 GDRMEYEKAPYQRSLLNQALSSVISTPTISSSNIPTPPSAHIAQPRRIYSTQDSNDPLNA 300
Query: 901 EIGDDIYIDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPKPWNKLKSGR 1080
EIGDDIYIDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPKPWNKLKSGR
Sbjct: 301 EIGDDIYIDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPKPWNKLKSGR 360
Query: 1081 ETFRRMYNWVAQPLATRLAILDMKTEDVNRASGMSPPTPAQNVRTHRRSTSDHDGPVSKR 1260
ETFRRMYNWVAQPLATRLAILDMKTEDVNRASGMSPPTPAQNVRTHRRSTSDHDGPVSKR
Sbjct: 361 ETFRRMYNWVAQPLATRLAILDMKTEDVNRASGMSPPTPAQNVRTHRRSTSDHDGPVSKR 420
Query: 1261 PRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARRRSRLGGNID 1440
PRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARRRSRLGGNID
Sbjct: 421 PRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARRRSRLGGNID 480
Query: 1441 EPTPFQQVKNISPPPVGDTSDALLNGDDHVPLLNTVMAEMYKEGAIATSNHSAEQREMIE 1620
EPTPFQQVKNISPPPVGDTSDALLNGDDHVPLLNTVMAEMYKEGAIATSNHSAEQREMIE
Sbjct: 481 EPTPFQQVKNISPPPVGDTSDALLNGDDHVPLLNTVMAEMYKEGAIATSNHSAEQREMIE 540
Query: 1621 RGFGVSIPGPSHSGELLNGXXXXXXXXXXXXXXXXXAYXXXXXXXXXXXXXXXQANGDIL 1800
RGFGVSIPGPSHSGELLNG AY QANGDIL
Sbjct: 541 RGFGVSIPGPSHSGELLNGDSHEDDEELDELNDSELAYEEDVEIGDEEEEDEEQANGDIL 600
Query: 1801 PTPXXXXXXXXXXXXXXAPDDGEYGATKLAAN 1896
PTP APDDGEYGATKLAAN
Sbjct: 601 PTPKVEELEEKTVIKEEAPDDGEYGATKLAAN 632
>gi|25147952|ref|NP_741017.1| C.Elegans Homeobox (ceh-38)
[Caenorhabditis elegans]
gi|21264445|sp|Q19720|HM38_CAEEL Homeobox protein ceh-38
gi|16604164|gb|AAL27244.1| C.elegans homeobox protein 38, isoform b
[Caenorhabditis elegans]
Length = 641
Score = 999 bits (2583), Expect = 0.0
Identities = 514/641 (80%), Positives = 515/641 (80%), Gaps = 9/641 (1%)
Frame = +1
Query: 1 MESSRTAATSTNGTEKSRRRNTDYLQIDPSSTFINNTGRGFAEELPENFLDXXXXXXXXX 180
MESSRTAATSTNGTEKSRRRNTDYLQIDPSSTFINNTGRGFAEELPENFLD
Sbjct: 1 MESSRTAATSTNGTEKSRRRNTDYLQIDPSSTFINNTGRGFAEELPENFLDTISPHPITP 60
Query: 181 XXXXXXXXXXXXXXXXXXXXQLASLXXXXXXXXXXXXXXXXXXXXXXXYETIKNEPEFSG 360
QLASL YETIKNEPEFSG
Sbjct: 61 SASTSSATSATEEPATSSAPQLASLAPMSMSSEQPSSSFSSASLLSSSYETIKNEPEFSG 120
Query: 361 STAGLLSPLHVDSRRRESHDFNTSPYIKEEEDLDGSHLLMGGIRPDTPTNDRSTDLGSIS 540
STAGLLSPLHVDSRRRESHDFNTSPYIKEEEDLDGSHLLMGGIRPDTPTNDRSTDLGSIS
Sbjct: 121 STAGLLSPLHVDSRRRESHDFNTSPYIKEEEDLDGSHLLMGGIRPDTPTNDRSTDLGSIS 180
Query: 541 SLLNEDHHTNTIGQSPSPRSTFGSDPTPMIQRQLIKNEDGVSPGSMGFSKNHQGYQKPRN 720
SLLNEDHHTNTIGQSPSPRSTFGSDPTPMIQRQLIKNEDGVSPGSMGFSKNHQGYQKPRN
Sbjct: 181 SLLNEDHHTNTIGQSPSPRSTFGSDPTPMIQRQLIKNEDGVSPGSMGFSKNHQGYQKPRN 240
Query: 721 GDRMEYEKAPYQRS---------LLNQALXXXXXXXXXXXXXXXXXXXAHIAQPRRIYST 873
GDRMEYEKAPYQR+ LLNQAL AHIAQPRRIYST
Sbjct: 241 GDRMEYEKAPYQRNSRKQKKPLGLLNQALSSVISTPTISSSNIPTPPSAHIAQPRRIYST 300
Query: 874 QDSNDPLNAEIGDDIYIDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPK 1053
QDSNDPLNAEIGDDIYIDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPK
Sbjct: 301 QDSNDPLNAEIGDDIYIDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPK 360
Query: 1054 PWNKLKSGRETFRRMYNWVAQPLATRLAILDMKTEDVNRASGMSPPTPAQNVRTHRRSTS 1233
PWNKLKSGRETFRRMYNWVAQPLATRLAILDMKTEDVNRASGMSPPTPAQNVRTHRRSTS
Sbjct: 361 PWNKLKSGRETFRRMYNWVAQPLATRLAILDMKTEDVNRASGMSPPTPAQNVRTHRRSTS 420
Query: 1234 DHDGPVSKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARR 1413
DHDGPVSKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARR
Sbjct: 421 DHDGPVSKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARR 480
Query: 1414 RSRLGGNIDEPTPFQQVKNISPPPVGDTSDALLNGDDHVPLLNTVMAEMYKEGAIATSNH 1593
RSRLGGNIDEPTPFQQVKNISPPPVGDTSDALLNGDDHVPLLNTVMAEMYKEGAIATSNH
Sbjct: 481 RSRLGGNIDEPTPFQQVKNISPPPVGDTSDALLNGDDHVPLLNTVMAEMYKEGAIATSNH 540
Query: 1594 SAEQREMIERGFGVSIPGPSHSGELLNGXXXXXXXXXXXXXXXXXAYXXXXXXXXXXXXX 1773
SAEQREMIERGFGVSIPGPSHSGELLNG AY
Sbjct: 541 SAEQREMIERGFGVSIPGPSHSGELLNGDSHEDDEELDELNDSELAYEEDVEIGDEEEED 600
Query: 1774 XXQANGDILPTPXXXXXXXXXXXXXXAPDDGEYGATKLAAN 1896
QANGDILPTP APDDGEYGATKLAAN
Sbjct: 601 EEQANGDILPTPKVEELEEKTVIKEEAPDDGEYGATKLAAN 641
>gi|7499644|pir||T16136 hypothetical protein F22D3.1 - Caenorhabditis
elegans
Length = 644
Score = 994 bits (2569), Expect = 0.0
Identities = 514/644 (79%), Positives = 515/644 (79%), Gaps = 12/644 (1%)
Frame = +1
Query: 1 MESSRTAATSTNGTEKSRRRNTDYLQIDPSSTFINNTGRGFAEELPENFLDXXXXXXXXX 180
MESSRTAATSTNGTEKSRRRNTDYLQIDPSSTFINNTGRGFAEELPENFLD
Sbjct: 1 MESSRTAATSTNGTEKSRRRNTDYLQIDPSSTFINNTGRGFAEELPENFLDTISPHPITP 60
Query: 181 XXXXXXXXXXXXXXXXXXXXQLASLXXXXXXXXXXXXXXXXXXXXXXXYETIKNEPE--- 351
QLASL YETIKNEPE
Sbjct: 61 SASTSSATSATEEPATSSAPQLASLAPMSMSSEQPSSSFSSASLLSSSYETIKNEPEDYR 120
Query: 352 FSGSTAGLLSPLHVDSRRRESHDFNTSPYIKEEEDLDGSHLLMGGIRPDTPTNDRSTDLG 531
FSGSTAGLLSPLHVDSRRRESHDFNTSPYIKEEEDLDGSHLLMGGIRPDTPTNDRSTDLG
Sbjct: 121 FSGSTAGLLSPLHVDSRRRESHDFNTSPYIKEEEDLDGSHLLMGGIRPDTPTNDRSTDLG 180
Query: 532 SISSLLNEDHHTNTIGQSPSPRSTFGSDPTPMIQRQLIKNEDGVSPGSMGFSKNHQGYQK 711
SISSLLNEDHHTNTIGQSPSPRSTFGSDPTPMIQRQLIKNEDGVSPGSMGFSKNHQGYQK
Sbjct: 181 SISSLLNEDHHTNTIGQSPSPRSTFGSDPTPMIQRQLIKNEDGVSPGSMGFSKNHQGYQK 240
Query: 712 PRNGDRMEYEKAPYQRS---------LLNQALXXXXXXXXXXXXXXXXXXXAHIAQPRRI 864
PRNGDRMEYEKAPYQR+ LLNQAL AHIAQPRRI
Sbjct: 241 PRNGDRMEYEKAPYQRNSRKQKKPLGLLNQALSSVISTPTISSSNIPTPPSAHIAQPRRI 300
Query: 865 YSTQDSNDPLNAEIGDDIYIDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLR 1044
YSTQDSNDPLNAEIGDDIYIDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLR
Sbjct: 301 YSTQDSNDPLNAEIGDDIYIDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLR 360
Query: 1045 NPKPWNKLKSGRETFRRMYNWVAQPLATRLAILDMKTEDVNRASGMSPPTPAQNVRTHRR 1224
NPKPWNKLKSGRETFRRMYNWVAQPLATRLAILDMKTEDVNRASGMSPPTPAQNVRTHRR
Sbjct: 361 NPKPWNKLKSGRETFRRMYNWVAQPLATRLAILDMKTEDVNRASGMSPPTPAQNVRTHRR 420
Query: 1225 STSDHDGPVSKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMN 1404
STSDHDGPVSKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMN
Sbjct: 421 STSDHDGPVSKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMN 480
Query: 1405 ARRRSRLGGNIDEPTPFQQVKNISPPPVGDTSDALLNGDDHVPLLNTVMAEMYKEGAIAT 1584
ARRRSRLGGNIDEPTPFQQVKNISPPPVGDTSDALLNGDDHVPLLNTVMAEMYKEGAIAT
Sbjct: 481 ARRRSRLGGNIDEPTPFQQVKNISPPPVGDTSDALLNGDDHVPLLNTVMAEMYKEGAIAT 540
Query: 1585 SNHSAEQREMIERGFGVSIPGPSHSGELLNGXXXXXXXXXXXXXXXXXAYXXXXXXXXXX 1764
SNHSAEQREMIERGFGVSIPGPSHSGELLNG AY
Sbjct: 541 SNHSAEQREMIERGFGVSIPGPSHSGELLNGDSHEDDEELDELNDSELAYEEDVEIGDEE 600
Query: 1765 XXXXXQANGDILPTPXXXXXXXXXXXXXXAPDDGEYGATKLAAN 1896
QANGDILPTP APDDGEYGATKLAAN
Sbjct: 601 EEDEEQANGDILPTPKVEELEEKTVIKEEAPDDGEYGATKLAAN 644
>gi|39590263|emb|CAE66001.1| Hypothetical protein CBG11192
[Caenorhabditis briggsae]
Length = 626
Score = 680 bits (1755), Expect = 0.0
Identities = 392/637 (61%), Positives = 435/637 (67%), Gaps = 11/637 (1%)
Frame = +1
Query: 1 MESSRTAATSTNGTEKSRRRNTDYLQIDPSSTFINNTGRGFAEELPENFLDXXXXXXXXX 180
MESSRTA++ TNGT KSRRRNTDYLQIDPSSTFINN+ RGF EELPENFLD
Sbjct: 1 MESSRTASSITNGTGKSRRRNTDYLQIDPSSTFINNS-RGFNEELPENFLDTISPHPVTP 59
Query: 181 XXXXXXXXXXXXXXXXXXXX-QLASLXXXXXXXXXXXXXXXXXXXXXXXYETIKNEPEFS 357
LASL YE IKNEPEFS
Sbjct: 60 SASSSSEDAPTIEEAPTTSAPSLASLAPMSLNTDQPGSSFSGGSLLSPSYEHIKNEPEFS 119
Query: 358 GSTAGLLSPLHVDSRRRESHDFNTSPYIKEEEDLDGSHLLMGGIRPDTPTNDRSTDLGSI 537
GST+GLLSPL SRRRESH+F+ S +IKEEEDLD + +GGIR D+P NDRS +LGS+
Sbjct: 120 GSTSGLLSPL--GSRRRESHEFS-SDFIKEEEDLDEGNPFIGGIRADSPQNDRSAELGSM 176
Query: 538 SSLLNEDHHTNTIGQSPSPRSTFGSDPTPMIQRQLIKNEDGVSPGSMGFSK-NHQGYQKP 714
LLNEDH + ++PSP S+FGSDPT MIQRQLIK+E+ V P G+SK Y KP
Sbjct: 177 --LLNEDHRP--MERTPSPHSSFGSDPTSMIQRQLIKSEE-VRPS--GYSKPTPPPYVKP 229
Query: 715 RNGDRMEYEKAPYQRSLLNQA---LXXXXXXXXXXXXXXXXXXXAHIAQP--RRIYSTQD 879
RNG R+++EK PYQRSLLNQ+ + I QP RR+YSTQD
Sbjct: 230 RNGARLDFEKTPYQRSLLNQSSPSVVTMASSNSIAASSSIPTPPTAIVQPPPRRVYSTQD 289
Query: 880 SNDPLNAEIGDDIYIDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPKPW 1059
SNDPLNAEIGDDIYIDT+DLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPKPW
Sbjct: 290 SNDPLNAEIGDDIYIDTRDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPKPW 349
Query: 1060 NKLKSGRETFRRMYNWVAQPLATRLAILDMKTEDVNRASGMSPPTPAQNVRTHRRSTSDH 1239
NKLKSGRETFRRMYNWV+QPL TRLAILDMKTE+V RASGMSPPTPAQNVRTHRRSTSDH
Sbjct: 350 NKLKSGRETFRRMYNWVSQPLDTRLAILDMKTEEVGRASGMSPPTPAQNVRTHRRSTSDH 409
Query: 1240 DGPVSKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARRRS 1419
DG SKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARRRS
Sbjct: 410 DGQTSKRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARRRS 469
Query: 1420 RLGGNIDEPTPFQQVKNISPPPVGDTSDALLNGDDHVPLLNTVMAEMYKEGAIATSNHSA 1599
RLG DEP P+QQV++I+PPP G + L NGDDH+PLLN+VMA MYK A S SA
Sbjct: 470 RLGVGNDEPAPYQQVRSITPPP-GADGNPLTNGDDHLPLLNSVMAHMYKGEA---STCSA 525
Query: 1600 EQREMIERGFGVSIPGPSHS--GELL-NG-XXXXXXXXXXXXXXXXXAYXXXXXXXXXXX 1767
+Q +++ERGFG + +HS G +L NG AY
Sbjct: 526 DQ-QLVERGFGGPVGSQNHSTVGRMLQNGHSHNEEDIDLDELNDDELAYEEDVEIGEEED 584
Query: 1768 XXXXQANGDILPTPXXXXXXXXXXXXXXAPDDGEYGA 1878
+ANGD LP P APDD EYGA
Sbjct: 585 EDDVRANGDTLPPPKEEHVAEKAVIKEEAPDDDEYGA 621