Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F26F12_1
(5490 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17562600|ref|NP_504523.1| CHromoDomain protein, helicase Mi-2... 3089 0.0
gi|39593093|emb|CAE64562.1| Hypothetical protein CBG09312 [Caeno... 2644 0.0
gi|17569817|ref|NP_510140.1| CHromoDomain protein, DNA binding h... 2192 0.0
gi|28422180|gb|AAH46866.1| B230399n07-prov protein [Xenopus laevis] 1479 0.0
gi|34858460|ref|XP_232354.2| similar to chromodomain helicase DN... 1283 0.0
gi|39204553|ref|NP_666091.1| chromodomain helicase DNA binding p... 1283 0.0
gi|4557453|ref|NP_001264.1| chromodomain helicase DNA binding pr... 1280 0.0
gi|24047226|gb|AAH38596.1| CHD4 protein [Homo sapiens] 1271 0.0
gi|5921743|sp|Q12873|CHD3_HUMAN Chromodomain helicase-DNA-bindin... 1265 0.0
gi|3298562|gb|AAC39923.1| zinc-finger helicase [Homo sapiens] 1265 0.0
gi|34870936|ref|XP_220602.2| similar to zinc-finger helicase [Ra... 1261 0.0
gi|24308089|ref|NP_056372.1| chromodomain helicase DNA binding p... 1260 0.0
gi|38079062|ref|XP_196334.3| similar to chromodomain helicase DN... 1247 0.0
gi|31240219|ref|XP_320523.1| ENSANGP00000008665 [Anopheles gambi... 1208 0.0
gi|47227437|emb|CAG04585.1| unnamed protein product [Tetraodon n... 1196 0.0
gi|4325130|gb|AAD17276.1| dMi-2 protein [Drosophila melanogaster] 1187 0.0
gi|24667055|ref|NP_649154.2| CG8103-PA [Drosophila melanogaster]... 1187 0.0
gi|47221566|emb|CAF97831.1| unnamed protein product [Tetraodon n... 1163 0.0
gi|50759145|ref|XP_417537.1| PREDICTED: similar to chromodomain ... 1126 0.0
gi|47211690|emb|CAF91815.1| unnamed protein product [Tetraodon n... 1107 0.0
gi|7512678|pir||T17269 hypothetical protein DKFZp434N231.1 - hum... 1070 0.0
gi|26330021|dbj|BAC28749.1| unnamed protein product [Mus musculus] 1050 0.0
gi|34872518|ref|XP_243049.2| similar to chromodomain helicase DN... 1030 0.0
gi|2645435|gb|AAB87384.1| CHD3 [Drosophila melanogaster] 1013 0.0
gi|47206539|emb|CAF92235.1| unnamed protein product [Tetraodon n... 999 0.0
gi|34533780|dbj|BAC86802.1| unnamed protein product [Homo sapiens] 939 0.0
gi|50729410|ref|XP_416503.1| PREDICTED: similar to Chromodomain ... 827 0.0
gi|24666729|ref|NP_649111.1| CG9594-PA [Drosophila melanogaster]... 815 0.0
gi|18400745|ref|NP_565587.1| chromatin remodeling factor CHD3 (P... 672 0.0
gi|37542684|gb|AAL47211.1| chromatin-remodeling factor CHD3 [Ory... 635 e-180
gi|37542688|gb|AAL47203.1| chromatin-remodeling factor CHD3 [Ory... 635 e-180
gi|25412286|pir||B84645 hypothetical protein At2g25170 [imported... 632 e-179
gi|3413850|dbj|BAA32289.1| KIAA0444 protein [Homo sapiens] 590 e-166
gi|17946168|gb|AAL49125.1| RE55932p [Drosophila melanogaster] 580 e-163
gi|42567315|ref|NP_194918.2| chromatin remodeling factor, putati... 559 e-157
gi|31211661|ref|XP_314800.1| ENSANGP00000011045 [Anopheles gambi... 494 e-138
gi|17137266|ref|NP_477197.1| CG3733-PA [Drosophila melanogaster]... 491 e-136
gi|40215423|gb|AAR82736.1| SD21488p [Drosophila melanogaster] 491 e-136
gi|7511822|pir||T13944 chromodomain-helicase-DNA-binding protein... 490 e-136
gi|34857217|ref|XP_218790.2| similar to Chromodomain-helicase-DN... 490 e-136
gi|4557449|ref|NP_001262.1| chromodomain helicase DNA binding pr... 484 e-134
gi|25411492|pir||C84507 hypothetical protein At2g13370 [imported... 482 e-134
gi|42569009|ref|NP_178970.2| chromodomain-helicase-DNA-binding f... 482 e-134
gi|28975391|gb|AAO61781.1| chromo-helicase DNA-binding protein [... 481 e-134
gi|6680928|ref|NP_031716.1| chromodomain helicase DNA binding pr... 480 e-133
gi|26340418|dbj|BAC33872.1| unnamed protein product [Mus musculus] 480 e-133
gi|13543768|gb|AAH06035.1| Chd4 protein [Mus musculus] 480 e-133
gi|4557447|ref|NP_001261.1| chromodomain helicase DNA binding pr... 479 e-133
gi|476961|pir||A47392 chromodomain-helicase-DNA-binding protein,... 478 e-133
gi|45384402|ref|NP_990272.1| chromo-helicase-DNA-binding on the ... 478 e-133
gi|5917754|gb|AAD56022.1| chromodomain helicase DNA binding prot... 476 e-132
gi|48137452|ref|XP_393364.1| similar to SD21488p [Apis mellifera] 474 e-131
gi|33146539|dbj|BAC79716.1| chromodomain helicase DNA binding pr... 471 e-131
gi|34901830|ref|NP_912261.1| putative zinc-finger helicase [Oryz... 471 e-131
gi|28975395|gb|AAO61783.1| chromo-helicase DNA-binding protein [... 471 e-131
gi|5917753|gb|AAD56021.1| chromodomain helicase DNA binding prot... 469 e-130
gi|5917756|gb|AAD56024.1| chromodomain helicase DNA binding prot... 469 e-130
gi|5917755|gb|AAD56023.1| chromodomain helicase DNA binding prot... 469 e-130
gi|7504867|pir||T23056 hypothetical protein H06O01.2 - Caenorhab... 468 e-130
gi|32563629|ref|NP_491994.2| chromo domain and SNF2 related doma... 468 e-130
gi|5917757|gb|AAD56025.1| chromodomain helicase DNA binding prot... 468 e-130
gi|50547625|ref|XP_501282.1| hypothetical protein [Yarrowia lipo... 467 e-129
gi|39583607|emb|CAE65711.1| Hypothetical protein CBG10790 [Caeno... 467 e-129
gi|19115879|ref|NP_594967.1| putative transcriptional regulator;... 464 e-128
gi|45201219|ref|NP_986789.1| AGR123Cp [Eremothecium gossypii] >g... 459 e-127
gi|20152037|gb|AAM11378.1| LD39323p [Drosophila melanogaster] 459 e-127
gi|47206405|emb|CAG01534.1| unnamed protein product [Tetraodon n... 458 e-127
gi|50761329|ref|XP_429117.1| PREDICTED: similar to chromodomain ... 455 e-126
gi|50306047|ref|XP_452985.1| unnamed protein product [Kluyveromy... 454 e-125
gi|50293735|ref|XP_449279.1| unnamed protein product [Candida gl... 453 e-125
gi|15241584|ref|NP_199293.1| chromodomain-helicase-DNA-binding f... 452 e-125
gi|6321012|ref|NP_011091.1| Sole S. cerevisiae member of CHD gen... 452 e-125
gi|50426953|ref|XP_462077.1| unnamed protein product [Debaryomyc... 450 e-124
gi|46443171|gb|EAL02455.1| hypothetical protein CaO19.10553 [Can... 449 e-124
gi|47211143|emb|CAF96563.1| unnamed protein product [Tetraodon n... 443 e-122
gi|23396522|sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-bindi... 441 e-122
gi|38089687|ref|XP_284439.2| RIKEN cDNA 1810014J18 [Mus musculus] 441 e-122
gi|34866132|ref|XP_232671.2| similar to Probable chromodomain-he... 441 e-122
gi|42658959|ref|XP_098762.6| KIAA1416 protein [Homo sapiens] 441 e-122
gi|19114572|ref|NP_593660.1| putative helicase [Schizosaccharomy... 441 e-121
gi|49355790|ref|NP_079410.3| chromodomain helicase DNA binding p... 440 e-121
gi|50256686|gb|EAL19409.1| hypothetical protein CNBH1020 [Crypto... 439 e-121
gi|49476336|gb|AAT66509.1| KISH2; hKISH2; Kismet homolog 2 [Homo... 438 e-121
gi|17986031|ref|NP_523441.1| CG3696-PA [Drosophila melanogaster]... 438 e-121
gi|38078060|ref|XP_149413.3| RIKEN cDNA A730019I05 gene [Mus mus... 437 e-120
gi|38104231|gb|EAA50830.1| hypothetical protein MG04589.4 [Magna... 436 e-120
gi|11267547|pir||T43334 helicase-related protein hrp1 - fission ... 434 e-119
gi|34327952|dbj|BAA20767.2| KIAA0308 [Homo sapiens] 431 e-119
gi|46125449|ref|XP_387278.1| hypothetical protein FG07102.1 [Gib... 430 e-118
gi|32420105|ref|XP_330496.1| hypothetical protein [Neurospora cr... 428 e-118
gi|34851357|ref|XP_226325.2| similar to Probable chromodomain-he... 428 e-118
gi|49077756|ref|XP_402701.1| hypothetical protein UM05086.1 [Ust... 427 e-117
gi|50738005|ref|XP_419222.1| PREDICTED: similar to Probable chro... 427 e-117
gi|41149958|ref|XP_370738.1| helicase with SNF2 domain 1 [Homo s... 427 e-117
gi|23396512|sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-bindi... 427 e-117
gi|34328020|dbj|BAB13390.3| KIAA1564 protein [Homo sapiens] 427 e-117
gi|39589511|emb|CAE74540.1| Hypothetical protein CBG22297 [Caeno... 421 e-115
gi|6437558|gb|AAF08585.1| putative ATPase (ISW2-like) [Arabidops... 419 e-115
gi|20259462|gb|AAM13851.1| putative ATPase (ISW2) [Arabidopsis t... 418 e-115
gi|22330875|ref|NP_187291.2| DNA-dependent ATPase, putative [Ara... 418 e-115
gi|29244924|ref|NP_115597.3| chromodomain helicase DNA binding p... 418 e-115
gi|19421557|gb|AAK56405.1| chromodomain helicase DNA binding pro... 418 e-115
gi|23396493|sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-bindi... 418 e-115
gi|34914698|ref|NP_918696.1| putative DNA-dependent ATPase [Oryz... 418 e-115
gi|30686915|ref|NP_568365.2| DNA-dependent ATPase, putative [Ara... 418 e-115
gi|30686918|ref|NP_850847.1| DNA-dependent ATPase, putative [Ara... 418 e-115
gi|17508849|ref|NP_491426.1| chromodomain-helicase-DNA-binding p... 417 e-114
gi|12083522|gb|AAG48831.1| similar to Arabidopsis thaliana putat... 416 e-114
gi|49086734|ref|XP_405392.1| hypothetical protein AN1255.2 [Aspe... 416 e-114
gi|47228067|emb|CAF97696.1| unnamed protein product [Tetraodon n... 415 e-114
gi|47215569|emb|CAG10740.1| unnamed protein product [Tetraodon n... 413 e-113
gi|34783716|gb|AAH57115.1| Smarca1 protein [Mus musculus] 407 e-111
gi|14028667|gb|AAK52453.1| DNA-dependent ATPase SNF2L [Mus muscu... 407 e-111
gi|30578398|ref|NP_444353.2| SWI/SNF related, matrix associated,... 407 e-111
gi|50745990|ref|XP_420328.1| PREDICTED: similar to SWI/SNF-relat... 406 e-111
gi|34881588|ref|XP_229124.2| similar to SWI/SNF-related matrix-a... 405 e-111
gi|3068759|gb|AAC41305.1| Mi-2 [Xenopus laevis] 405 e-111
gi|45198479|ref|NP_985508.1| AFL040Wp [Eremothecium gossypii] >g... 405 e-111
gi|21071044|ref|NP_003060.2| SWI/SNF-related matrix-associated a... 402 e-110
gi|626929|pir||S46122 SNF2 protein homolog YBR245c - yeast (Sacc... 402 e-110
gi|479805|pir||S35458 SNF2 protein homolog - human (fragment) >g... 402 e-110
gi|6319722|ref|NP_009804.1| has strong homology to Drosophila IS... 402 e-110
gi|134584|sp|P28370|SN21_HUMAN Possible global transcription act... 402 e-110
gi|38566825|emb|CAE76132.1| related to helicase-DNA-binding prot... 400 e-109
gi|32412838|ref|XP_326899.1| hypothetical protein [Neurospora cr... 400 e-109
gi|50746279|ref|XP_420423.1| PREDICTED: similar to hSNF2H [Gallu... 398 e-109
gi|46226948|gb|EAK87914.1| chromodomain-helicase-DNA-binding'mul... 396 e-108
gi|34851567|ref|XP_226380.2| similar to ATP-dependent chromatin ... 395 e-108
gi|40254124|ref|NP_444354.2| SWI/SNF related, matrix associated,... 395 e-108
gi|49899007|gb|AAH76715.1| ISWI protein [Xenopus laevis] 395 e-108
gi|2967452|dbj|BAA25173.1| hSNF2H [Homo sapiens] >gnl|BL_ORD_ID|... 395 e-108
gi|21071058|ref|NP_003592.2| SWI/SNF-related matrix-associated a... 395 e-108
gi|34899102|ref|NP_910897.1| putative chromodomain-helicase-DNA-... 395 e-108
gi|34907414|ref|NP_915054.1| putative chromodomain-helicase-DNA-... 395 e-108
gi|11035016|gb|AAG01537.2| imitation switch ISWI [Xenopus laevis] 395 e-108
gi|23489925|gb|EAA21818.1| SNF2 family N-terminal domain, putati... 394 e-107
gi|14028669|gb|AAK52454.1| DNA-dependent ATPase SNF2H [Mus muscu... 394 e-107
gi|49071866|ref|XP_400222.1| hypothetical protein UM02607.1 [Ust... 394 e-107
gi|46437717|gb|EAK97058.1| hypothetical protein CaO19.7401 [Cand... 394 e-107
gi|6324879|ref|NP_014948.1| has strong homology to Drosophila IS... 394 e-107
gi|50312307|ref|XP_456186.1| unnamed protein product [Kluyveromy... 394 e-107
gi|50254945|gb|EAL17685.1| hypothetical protein CNBL2000 [Crypto... 393 e-107
gi|50310725|ref|XP_455384.1| unnamed protein product [Kluyveromy... 393 e-107
gi|11359727|pir||T18404 chromatin remodelling complex protein SN... 392 e-107
gi|34860336|ref|XP_230814.2| similar to chromodomain helicase DN... 392 e-107
gi|23508249|ref|NP_700918.1| PfSNF2L [Plasmodium falciparum 3D7]... 392 e-107
gi|50285639|ref|XP_445248.1| unnamed protein product [Candida gl... 392 e-107
gi|46227356|gb|EAK88291.1| CHD3 ortholog with 2x chromodomains p... 391 e-107
gi|46137317|ref|XP_390350.1| hypothetical protein FG10174.1 [Gib... 390 e-106
gi|50290467|ref|XP_447665.1| unnamed protein product [Candida gl... 390 e-106
gi|47217344|emb|CAG11049.1| unnamed protein product [Tetraodon n... 390 e-106
gi|23489816|gb|EAA21734.1| chromodomain-helicase-DNA-binding pro... 389 e-106
gi|31204937|ref|XP_311417.1| ENSANGP00000016886 [Anopheles gambi... 389 e-106
gi|23508035|ref|NP_700705.1| hypothetical protein [Plasmodium fa... 388 e-105
gi|45199055|ref|NP_986084.1| AFR537Wp [Eremothecium gossypii] >g... 387 e-105
gi|50551961|ref|XP_503455.1| hypothetical protein [Yarrowia lipo... 385 e-105
gi|17737463|ref|NP_523719.1| CG8625-PA [Drosophila melanogaster]... 385 e-105
gi|20151803|gb|AAM11261.1| RH13158p [Drosophila melanogaster] 385 e-105
gi|32398963|emb|CAD98428.1| SNF2 helicase, possible [Cryptospori... 384 e-104
gi|49096640|ref|XP_409780.1| hypothetical protein AN5643.2 [Aspe... 384 e-104
gi|34854132|ref|XP_238731.2| similar to Chromodomain-helicase-DN... 384 e-104
gi|50753684|ref|XP_414088.1| PREDICTED: similar to hypothetical ... 383 e-104
gi|49088566|ref|XP_406093.1| hypothetical protein AN1956.2 [Aspe... 383 e-104
gi|50420017|ref|XP_458541.1| unnamed protein product [Debaryomyc... 383 e-104
gi|46228591|gb|EAK89461.1| SNF2L ortholog with a SWI/SNF2 like A... 382 e-104
gi|41053461|ref|NP_956607.1| similar to chromodomain helicase DN... 381 e-104
gi|46137507|ref|XP_390445.1| conserved hypothetical protein [Gib... 379 e-103
gi|10434055|dbj|BAB14112.1| unnamed protein product [Homo sapiens] 379 e-103
gi|38102523|gb|EAA49354.1| hypothetical protein MG01012.4 [Magna... 379 e-103
gi|35505451|gb|AAH57567.1| Chromodomain helicase DNA binding pro... 378 e-102
gi|13386044|ref|NP_080815.1| chromodomain helicase DNA binding p... 378 e-102
gi|50549971|ref|XP_502458.1| hypothetical protein [Yarrowia lipo... 377 e-102
gi|1078857|pir||S44645 hypothetical protein F37A4.8 - Caenorhabd... 377 e-102
gi|25144179|ref|NP_498468.2| yeast Imitation SWI homolog (116.7 ... 377 e-102
gi|21071046|ref|NP_620604.1| SWI/SNF-related matrix-associated a... 376 e-102
gi|33944265|ref|XP_340280.1| transcription activator, putative [... 376 e-102
gi|26348885|dbj|BAC38082.1| unnamed protein product [Mus musculus] 376 e-102
gi|38079103|ref|XP_110500.2| similar to ATP-dependent chromatin ... 376 e-102
gi|50729550|ref|XP_416560.1| PREDICTED: similar to chromodomain ... 375 e-102
gi|19075044|ref|NP_586645.1| similarity to CHROMODOMAIN HELICASE... 374 e-101
gi|38102212|gb|EAA49078.1| hypothetical protein MG00736.4 [Magna... 373 e-101
gi|32405162|ref|XP_323194.1| hypothetical protein [Neurospora cr... 372 e-101
gi|42734377|ref|NP_004275.2| chromodomain helicase DNA binding p... 372 e-101
gi|28175792|gb|AAH43501.1| Similar to RIKEN cDNA 4432404A22 gene... 372 e-101
gi|7022541|dbj|BAA91637.1| unnamed protein product [Homo sapiens] 372 e-101
gi|12654665|gb|AAH01171.1| Unknown (protein for IMAGE:3355762) [... 372 e-101
gi|39594011|emb|CAE70121.1| Hypothetical protein CBG16574 [Caeno... 367 1e-99
gi|39593716|emb|CAE62008.1| Hypothetical protein CBG06016 [Caeno... 366 4e-99
gi|39583648|emb|CAE63752.1| Hypothetical protein CBG08287 [Caeno... 362 6e-98
gi|49089400|ref|XP_406415.1| hypothetical protein AN2278.2 [Aspe... 361 1e-97
gi|49069018|ref|XP_398798.1| hypothetical protein UM01183.1 [Ust... 360 2e-97
gi|15230608|ref|NP_187252.1| homeotic gene regulator, putative [... 358 8e-97
gi|46435400|gb|EAK94782.1| hypothetical protein CaO19.4437 [Cand... 358 8e-97
gi|45384078|ref|NP_990470.1| BRM protein [Gallus gallus] >gnl|BL... 356 3e-96
gi|30687235|ref|NP_197432.2| homeotic gene regulator, putative [... 356 3e-96
gi|48255900|ref|NP_003061.3| SWI/SNF-related matrix-associated a... 356 4e-96
gi|49523317|gb|AAH75641.1| Smarca2 protein [Mus musculus] 356 4e-96
gi|1711406|sp|P51531|SN22_HUMAN Possible global transcription ac... 356 4e-96
gi|34862108|ref|XP_342040.1| similar to SWI/SNF-related matrix-a... 356 4e-96
gi|48255898|ref|NP_620614.2| SWI/SNF-related matrix-associated a... 356 4e-96
gi|33440456|gb|AAH56199.1| Smarca2 protein [Mus musculus] 356 4e-96
gi|32411725|ref|XP_326343.1| hypothetical protein [Neurospora cr... 355 7e-96
gi|45384232|ref|NP_990390.1| BRG1 protein [Gallus gallus] >gnl|B... 355 9e-96
gi|22095171|emb|CAD43278.1| brahma-related protein 1 [Rattus nor... 355 9e-96
gi|46125857|ref|XP_387482.1| hypothetical protein FG07306.1 [Gib... 355 9e-96
gi|2143481|pir||I53078 homeotic gene regulator - mouse (fragment... 355 9e-96
gi|34860432|ref|XP_343359.1| SWI/SNF related, matrix associated,... 355 9e-96
gi|39930329|ref|NP_035547.1| SWI/SNF related, matrix associated,... 355 9e-96
gi|1711407|sp|P51532|SN24_HUMAN Possible global transcription ac... 355 9e-96
gi|21071056|ref|NP_003063.2| SWI/SNF-related matrix-associated a... 355 9e-96
gi|10946129|gb|AAG24790.1| SMARCA4 isoform 2 [Homo sapiens] 355 9e-96
gi|2136177|pir||S45251 SNF2alpha protein - human >gnl|BL_ORD_ID|... 353 3e-95
gi|19112177|ref|NP_595385.1| helicase C protein with SNF2 domain... 353 3e-95
gi|47226612|emb|CAG07771.1| unnamed protein product [Tetraodon n... 353 3e-95
gi|17539642|ref|NP_502082.1| phasmid Socket Absent PSA-4, homolo... 352 4e-95
gi|46227736|gb|EAK88656.1| SWI/SNF related putative transcriptio... 352 8e-95
gi|283699|pir||A42091 transcription activator SNF2/SWI2 homolog ... 351 1e-94
gi|17985967|ref|NP_536746.1| CG5942-PA [Drosophila melanogaster]... 351 1e-94
gi|31205071|ref|XP_311484.1| ENSANGP00000013716 [Anopheles gambi... 351 1e-94
gi|24664907|ref|NP_730088.1| CG5942-PD [Drosophila melanogaster]... 351 1e-94
gi|50551421|ref|XP_503184.1| hypothetical protein [Yarrowia lipo... 351 1e-94
gi|31322808|gb|AAP31846.1| Brg1p [Tetrahymena thermophila] 351 1e-94
gi|47086607|ref|NP_997881.1| phasmid Socket Absent PSA-4, homolo... 350 2e-94
gi|49616741|gb|AAT67217.1| SWI/SNF-related matrix-associated act... 350 2e-94
gi|19115773|ref|NP_594861.1| putative transcriptional regulator ... 350 2e-94
gi|29247792|gb|EAA39344.1| GLP_177_26570_34507 [Giardia lamblia ... 350 2e-94
gi|38110738|gb|EAA56417.1| hypothetical protein MG06388.4 [Magna... 350 3e-94
gi|46444408|gb|EAL03683.1| hypothetical protein CaO19.9102 [Cand... 349 5e-94
gi|46444555|gb|EAL03829.1| hypothetical protein CaO19.1526 [Cand... 349 5e-94
gi|31745178|ref|NP_853634.1| SWI/SNF related, matrix associated,... 348 6e-94
gi|7497824|pir||T28937 hypothetical protein C52B9.8 - Caenorhabd... 348 8e-94
gi|17551114|ref|NP_508736.1| brahma (XE918) [Caenorhabditis eleg... 348 8e-94
gi|50426167|ref|XP_461680.1| unnamed protein product [Debaryomyc... 348 1e-93
gi|6322065|ref|NP_012140.1| helicase related protein, snf2 homol... 345 9e-93
gi|45199080|ref|NP_986109.1| AFR562Cp [Eremothecium gossypii] >g... 345 9e-93
gi|50288627|ref|XP_446743.1| unnamed protein product [Candida gl... 344 2e-92
gi|50547703|ref|XP_501321.1| hypothetical protein [Yarrowia lipo... 343 2e-92
gi|45190977|ref|NP_985231.1| AER375Cp [Eremothecium gossypii] >g... 343 2e-92
gi|172764|gb|AAA35120.1| STH1 protein 343 4e-92
gi|228213|prf||1718318A GAM1 gene 342 5e-92
gi|481644|pir||S39059 protein BRG1 - human 342 5e-92
gi|738309|prf||1924378A nucler protein GRB1 342 8e-92
gi|19074741|ref|NP_586247.1| similarity to THE ATPase COMPONENT ... 340 2e-91
gi|6324864|ref|NP_014933.1| involved in the coordinate regulatio... 340 2e-91
gi|34559250|gb|AAQ75381.1| global transcription activator Snf2p ... 340 3e-91
gi|50303907|ref|XP_451901.1| unnamed protein product [Kluyveromy... 339 4e-91
gi|46441784|gb|EAL01078.1| hypothetical protein CaO19.239 [Candi... 339 5e-91
gi|50294289|ref|XP_449556.1| unnamed protein product [Candida gl... 338 9e-91
gi|50425079|ref|XP_461131.1| unnamed protein product [Debaryomyc... 337 2e-90
gi|46397098|sp|O94421|YQGE_SCHPO Hypothetical helicase C1620.14c... 336 3e-90
gi|47213811|emb|CAF92584.1| unnamed protein product [Tetraodon n... 336 4e-90
gi|50310529|ref|XP_455284.1| unnamed protein product [Kluyveromy... 333 2e-89
gi|46228555|gb|EAK89425.1| brahma like protein with a HSA domain... 332 6e-89
gi|50255395|gb|EAL18130.1| hypothetical protein CNBK1510 [Crypto... 330 3e-88
gi|48108143|ref|XP_396195.1| similar to ENSANGP00000016886 [Apis... 328 7e-88
gi|50749410|ref|XP_421626.1| PREDICTED: similar to helicase, lym... 323 3e-86
gi|20197603|gb|AAD29835.2| putative SNF2 subfamily transcription... 323 4e-86
gi|47209275|emb|CAF89705.1| unnamed protein product [Tetraodon n... 322 5e-86
gi|30683833|ref|NP_850117.1| chromatin remodeling protein, putat... 322 8e-86
gi|30683830|ref|NP_850116.1| chromatin remodeling protein, putat... 322 8e-86
gi|18463957|gb|AAL73042.1| chromatin complex subunit A101 [Zea m... 320 2e-85
gi|39597865|emb|CAE68557.1| Hypothetical protein CBG14390 [Caeno... 320 3e-85
gi|13603721|gb|AAK31908.1| putative chromatin remodeling protein... 318 9e-85
gi|50399992|gb|AAT76380.1| putative DNA-dependent ATPase [Oryza ... 318 1e-84
gi|23485366|gb|EAA20388.1| Arabidopsis thaliana BRAHMA ortholog-... 317 2e-84
gi|25407972|pir||A84683 probable SNF2 subfamily transcription re... 314 2e-83
gi|49022903|dbj|BAC41410.3| mKIAA0308 protein [Mus musculus] 313 2e-83
gi|15240074|ref|NP_201476.1| SNF2 domain-containing protein / he... 312 5e-83
gi|7485374|pir||T06312 hypothetical protein F11C18.100 - Arabido... 310 2e-82
gi|42569923|ref|NP_182025.2| transcription regulatory protein SN... 310 3e-82
gi|14042443|dbj|BAB55248.1| unnamed protein product [Homo sapiens] 308 7e-82
gi|42571231|ref|NP_973689.1| transcription regulatory protein SN... 308 1e-81
gi|23193483|gb|AAN14536.1| SNF2P [Oryza sativa (japonica cultiva... 308 1e-81
gi|33086941|gb|AAP92713.1| Swi2/Snf2-related protein DDM1; decre... 306 5e-81
gi|47209419|emb|CAF93109.1| unnamed protein product [Tetraodon n... 304 2e-80
gi|12853471|dbj|BAB29753.1| unnamed protein product [Mus musculus] 304 2e-80
gi|25408914|pir||B84885 probable transcription activator [import... 303 2e-80
gi|26383564|dbj|BAC25543.1| unnamed protein product [Mus musculus] 296 9e-80
gi|45357056|gb|AAS58484.1| SNF2P [Triticum monococcum] 300 3e-79
gi|45357049|gb|AAS58478.1| SNF2P [Hordeum vulgare subsp. vulgare] 299 4e-79
gi|23193481|gb|AAN14535.1| SNF2P [Hordeum vulgare] 295 6e-78
gi|4056412|gb|AAC97986.1| BRG-1-HUMAN [AA 812-1440]; nuclear pr... 293 4e-77
gi|4056413|gb|AAC97987.1| SN24_HUMAN; nuclear protein GRB1; home... 293 4e-77
gi|26378644|dbj|BAB28757.2| unnamed protein product [Mus musculus] 292 5e-77
gi|12232371|ref|NP_032260.2| helicase, lymphoid specific; prolif... 292 5e-77
gi|21064287|gb|AAM29373.1| LD32039p [Drosophila melanogaster] 288 1e-75
gi|26337379|dbj|BAC32375.1| unnamed protein product [Mus musculus] 280 4e-73
gi|38079010|ref|XP_110546.2| similar to ATP-dependent chromatin ... 277 2e-72
gi|42571243|ref|NP_973695.1| transcription regulatory protein SN... 275 7e-72
gi|5738867|emb|CAB52874.1| SPCC830.01c [Schizosaccharomyces pombe] 274 2e-71
gi|25408956|pir||G84897 hypothetical protein At2g46020 [imported... 273 4e-71
gi|42569958|ref|NP_182126.2| transcription regulatory protein SN... 273 4e-71
gi|26347721|dbj|BAC37509.1| unnamed protein product [Mus musculus] 271 1e-70
gi|2137490|pir||JC4666 lymphocyte specific helicase - mouse 271 2e-70
gi|20072056|gb|AAH26672.1| Smarca4 protein [Mus musculus] 267 2e-69
gi|38088468|ref|XP_145698.4| similar to Chromodomain-helicase-DN... 262 6e-68
gi|26339542|dbj|BAC33442.1| unnamed protein product [Mus musculus] 262 6e-68
gi|50758555|ref|XP_417313.1| PREDICTED: similar to chromodomain ... 260 2e-67
gi|42407265|dbj|BAD10849.1| lymphoid specific helicase variant6 ... 259 4e-67
gi|29248111|gb|EAA39653.1| GLP_217_10600_6770 [Giardia lamblia A... 257 3e-66
gi|31204935|ref|XP_311416.1| ENSANGP00000016881 [Anopheles gambi... 257 3e-66
gi|37359954|dbj|BAC97955.1| mKIAA0444 protein [Mus musculus] 251 1e-64
gi|34532335|dbj|BAC86391.1| unnamed protein product [Homo sapiens] 249 4e-64
gi|49257014|dbj|BAD24805.1| lymphoid specific helicase variant10... 247 2e-63
gi|21914927|ref|NP_060533.2| helicase, lymphoid-specific; prolif... 247 2e-63
gi|16805045|ref|NP_473074.1| DNA helicase, putative [Plasmodium ... 247 3e-63
gi|20521890|dbj|BAA92573.2| KIAA1335 protein [Homo sapiens] 246 4e-63
gi|10433595|dbj|BAB13994.1| unnamed protein product [Homo sapiens] 246 6e-63
gi|31874139|emb|CAD97978.1| hypothetical protein [Homo sapiens] 245 8e-63
gi|34526499|dbj|BAC85127.1| FLJ00266 protein [Homo sapiens] 243 5e-62
gi|50289791|ref|XP_447327.1| unnamed protein product [Candida gl... 241 1e-61
gi|50418184|gb|AAH77717.1| CHD1L protein [Homo sapiens] 240 3e-61
gi|20988518|gb|AAH30435.1| Chd3 protein [Mus musculus] 239 7e-61
gi|2134376|pir||I50372 hypothetical protein 2 delta-EF1 region -... 238 2e-60
gi|49104376|ref|XP_411240.1| hypothetical protein AN7103.2 [Aspe... 235 8e-60
gi|19075591|ref|NP_588091.1| DNA repair and recombination protei... 233 4e-59
gi|48855575|ref|ZP_00309734.1| COG0553: Superfamily II DNA/RNA h... 233 4e-59
gi|50422435|ref|XP_459783.1| unnamed protein product [Debaryomyc... 233 5e-59
gi|15224228|ref|NP_179466.1| SNF2 domain-containing protein / he... 233 5e-59
gi|1585696|prf||2201456A Mi-2 autoantigen 232 9e-59
gi|50548883|ref|XP_501912.1| hypothetical protein [Yarrowia lipo... 232 9e-59
gi|2135739|pir||I38558 Mi-2 autoantigen 240 kDa protein - human ... 232 9e-59
gi|46435782|gb|EAK95157.1| hypothetical protein CaO19.607 [Candi... 229 6e-58
gi|46435735|gb|EAK95111.1| hypothetical protein CaO19.8240 [Cand... 229 6e-58
gi|34894036|ref|NP_908343.1| putative DNA repair and recombinati... 229 7e-58
gi|46446009|ref|YP_007374.1| putative rapA, a bacterial member o... 228 1e-57
gi|26333481|dbj|BAC30458.1| unnamed protein product [Mus musculus] 228 1e-57
gi|45190542|ref|NP_984796.1| AEL065Cp [Eremothecium gossypii] >g... 228 2e-57
gi|6325175|ref|NP_015243.1| Essential abundant protein involved ... 227 3e-57
gi|42407259|dbj|BAD10846.1| lymphoid specific helicase variant3 ... 226 4e-57
gi|42407269|dbj|BAD10851.1| lymphoid specific helicase variant8 ... 226 4e-57
gi|46111317|ref|XP_382716.1| hypothetical protein FG02540.1 [Gib... 224 2e-56
gi|27819922|gb|AAL39744.2| LD35220p [Drosophila melanogaster] 223 4e-56
gi|17136368|ref|NP_476661.1| CG3736-PA [Drosophila melanogaster]... 223 4e-56
gi|1765914|emb|CAA71278.1| RAD54 [Drosophila melanogaster] 223 4e-56
gi|46444164|gb|EAL03441.1| hypothetical protein CaO19.5004 [Cand... 223 5e-56
gi|16803684|ref|NP_465169.1| similar to SNF2-type helicase [List... 223 5e-56
gi|50749484|ref|XP_421656.1| PREDICTED: similar to DNA excision ... 221 1e-55
gi|3329473|gb|AAC26857.1| RAD54 DNA repair protein [Drosophila m... 221 1e-55
gi|50289211|ref|XP_447036.1| unnamed protein product [Candida gl... 221 1e-55
gi|16800753|ref|NP_471021.1| similar to SNF2-type helicase [List... 221 1e-55
gi|17232392|ref|NP_488940.1| SWI/SNF family helicase [Nostoc sp.... 221 2e-55
gi|4557565|ref|NP_000115.1| excision repair cross-complementing ... 221 2e-55
gi|46447008|ref|YP_008373.1| conserved hypothetical protein [Par... 221 2e-55
gi|47093680|ref|ZP_00231434.1| helicase, Snf2 family [Listeria m... 220 3e-55
gi|50309923|ref|XP_454975.1| unnamed protein product [Kluyveromy... 220 3e-55
gi|46907873|ref|YP_014262.1| helicase, Snf2 family [Listeria mon... 220 3e-55
gi|50875884|emb|CAG35724.1| probable helicase [Desulfotalea psyc... 220 3e-55
gi|47096999|ref|ZP_00234573.1| helicase, Snf2 family [Listeria m... 219 4e-55
gi|19115202|ref|NP_594290.1| DNA repair protein rhp54 [Schizosac... 219 6e-55
gi|542215|pir||S41886 DNA repair protein - fission yeast (Schizo... 219 6e-55
gi|46119555|ref|ZP_00176801.2| COG0553: Superfamily II DNA/RNA h... 219 6e-55
gi|6321275|ref|NP_011352.1| DNA-dependent ATPase, stimulates str... 219 6e-55
gi|33864422|ref|NP_895982.1| SNF2 related domain:DEAD/DEAH box h... 218 1e-54
gi|45190351|ref|NP_984605.1| AEL256Cp [Eremothecium gossypii] >g... 217 3e-54
gi|50258606|gb|EAL21293.1| hypothetical protein CNBD3470 [Crypto... 216 4e-54
gi|23128497|ref|ZP_00110342.1| COG0553: Superfamily II DNA/RNA h... 216 4e-54
gi|50290001|ref|XP_447432.1| unnamed protein product [Candida gl... 216 4e-54
gi|42784409|ref|NP_981656.1| helicase, putative [Bacillus cereus... 215 1e-53
gi|48858203|ref|ZP_00312165.1| COG0553: Superfamily II DNA/RNA h... 215 1e-53
gi|49481223|ref|YP_039235.1| SNF2 family helicase [Bacillus thur... 214 1e-53
gi|31199727|ref|XP_308811.1| ENSANGP00000007696 [Anopheles gambi... 214 1e-53
gi|47228866|emb|CAG09381.1| unnamed protein product [Tetraodon n... 214 1e-53
gi|46914265|emb|CAG21045.1| hypothetical protein [Photobacterium... 214 1e-53
gi|15605441|ref|NP_220227.1| SWF/SNF family helicase [Chlamydia ... 214 2e-53
gi|49093726|ref|XP_408324.1| hypothetical protein AN4187.2 [Aspe... 214 2e-53
gi|47569742|ref|ZP_00240415.1| helicase, SNF2/RAD54 family [Baci... 213 3e-53
gi|6322495|ref|NP_012569.1| Protein involved in transcription-co... 213 4e-53
gi|38105538|gb|EAA51954.1| hypothetical protein MG03549.4 [Magna... 213 4e-53
gi|15618758|ref|NP_225044.1| SWI/SNF family helicase_2 [Chlamydo... 213 4e-53
gi|26333335|dbj|BAC30385.1| unnamed protein product [Mus musculus] 213 4e-53
gi|22775414|dbj|BAC11858.1| recombinational repair protein [Magn... 213 4e-53
gi|23126141|ref|ZP_00108047.1| COG0553: Superfamily II DNA/RNA h... 213 4e-53
gi|15834706|ref|NP_296465.1| helicase, Snf2 family [Chlamydia mu... 213 5e-53
gi|21397710|ref|NP_653695.1| SNF2_N, SNF2 and others N-terminal ... 213 5e-53
gi|550429|emb|CAA57290.1| RAD26 [Saccharomyces cerevisiae] 212 7e-53
gi|19173162|ref|NP_596965.1| RAD26-LIKE DNA REPAIR AND RECOMBINA... 212 7e-53
gi|33866892|ref|NP_898451.1| SNF2 helicase homolog [Synechococcu... 212 7e-53
gi|29840673|ref|NP_829779.1| helicase, Snf2 family [Chlamydophil... 212 9e-53
gi|15836382|ref|NP_300906.1| SWI/SNF family helicase_2 [Chlamydo... 212 9e-53
gi|23100530|ref|NP_693997.1| helicase [Oceanobacillus iheyensis ... 212 9e-53
gi|24373219|ref|NP_717262.1| Snf2 family protein [Shewanella one... 211 1e-52
gi|46255694|gb|AAH05038.1| Unknown (protein for IMAGE:3618220) [... 211 1e-52
gi|33239499|ref|NP_874441.1| Superfamily II DNA/RNA helicases, S... 211 2e-52
gi|1905887|gb|AAB54115.1| putative recombination factor GdRad54 ... 210 3e-52
gi|26988870|ref|NP_744295.1| helicase, SNF2/RAD54 family [Pseudo... 210 4e-52
gi|41055574|ref|NP_957438.1| similar to RAD54-like [Danio rerio]... 210 4e-52
gi|23474884|ref|ZP_00130175.1| COG0553: Superfamily II DNA/RNA h... 209 5e-52
gi|47575794|ref|NP_001001241.1| hypothetical protein MGC69368 [X... 209 5e-52
gi|32421361|ref|XP_331124.1| hypothetical protein ( (AB032901) R... 209 6e-52
gi|7384851|dbj|BAA93079.1| Rad54 homolog [Neurospora crassa] 209 8e-52
gi|30023277|ref|NP_834908.1| SWF/SNF family helicase [Bacillus c... 208 1e-51
gi|11359241|pir||T40642 probable helicase - fission yeast (Schiz... 208 1e-51
gi|27803083|emb|CAD60786.1| unnamed protein product [Podospora a... 208 1e-51
gi|23111644|ref|ZP_00097250.1| COG0553: Superfamily II DNA/RNA h... 208 1e-51
gi|19112872|ref|NP_596080.1| putative helicase [Schizosaccharomy... 208 1e-51
gi|1495708|emb|CAA66380.1| RAD54 [Mus musculus] 207 2e-51
gi|26353994|dbj|BAC40627.1| unnamed protein product [Mus musculus] 207 2e-51
gi|31982068|ref|NP_033041.2| RAD54 like [Mus musculus] >gnl|BL_O... 207 2e-51
gi|15901369|ref|NP_345973.1| Snf2 family protein [Streptococcus ... 207 2e-51
gi|45382655|ref|NP_990041.1| RAD54B protein [Gallus gallus] >gnl... 207 2e-51
gi|39589798|emb|CAE67033.1| Hypothetical protein CBG12435 [Caeno... 207 2e-51
gi|37699520|gb|AAB95091.3| 89B helicase [Drosophila melanogaster] 207 2e-51
gi|32416130|ref|XP_328543.1| hypothetical protein [Neurospora cr... 207 2e-51
gi|28317220|gb|AAO39617.1| GH12153p [Drosophila melanogaster] 207 2e-51
gi|26326753|dbj|BAC27120.1| unnamed protein product [Mus musculus] 207 2e-51
gi|24647318|ref|NP_732097.1| CG4261-PA [Drosophila melanogaster]... 207 2e-51
gi|25013136|gb|AAN71681.1| SD16865p [Drosophila melanogaster] 207 2e-51
gi|16080681|ref|NP_391509.1| ywqA [Bacillus subtilis subsp. subt... 206 5e-51
gi|1763712|emb|CAB05939.1| ywqA [Bacillus subtilis] 206 5e-51
gi|16332119|ref|NP_442847.1| helicase of the snf2/rad54 family [... 206 7e-51
gi|15903418|ref|NP_358968.1| SWF/SNF family ATP-dependent RNA he... 206 7e-51
gi|48851519|ref|ZP_00305733.1| COG0553: Superfamily II DNA/RNA h... 206 7e-51
gi|15595996|ref|NP_249490.1| probable helicase [Pseudomonas aeru... 205 9e-51
gi|17508659|ref|NP_492438.1| RADiation sensitivity abnormal/yeas... 204 2e-50
gi|49096408|ref|XP_409664.1| hypothetical protein AN5527.2 [Aspe... 203 4e-50
gi|15615476|ref|NP_243779.1| SNF2 helicase [Bacillus halodurans ... 203 4e-50
gi|49070818|ref|XP_399698.1| hypothetical protein UM02083.1 [Ust... 202 6e-50
gi|47939775|gb|AAH72215.1| MGC81308 protein [Xenopus laevis] 202 6e-50
gi|41725682|ref|ZP_00152440.1| COG0553: Superfamily II DNA/RNA h... 202 7e-50
gi|50557340|ref|XP_506078.1| hypothetical protein [Yarrowia lipo... 202 7e-50
gi|50302399|ref|XP_451134.1| unnamed protein product [Kluyveromy... 202 7e-50
gi|34877154|ref|XP_224627.2| similar to Excision repair protein ... 202 1e-49
gi|48730026|ref|ZP_00263775.1| COG0553: Superfamily II DNA/RNA h... 201 2e-49
gi|37521835|ref|NP_925212.1| probable helicase [Gloeobacter viol... 200 3e-49
gi|6912622|ref|NP_036547.1| RAD54 homolog B isoform 1; RAD54, S.... 200 4e-49
gi|34867177|ref|XP_232785.2| similar to RAD54B homolog isoform 1... 199 6e-49
gi|46129542|ref|ZP_00164017.2| COG0553: Superfamily II DNA/RNA h... 199 6e-49
gi|46580490|ref|YP_011298.1| Snf2 family protein [Desulfovibrio ... 199 8e-49
gi|47204500|emb|CAG14184.1| unnamed protein product [Tetraodon n... 199 8e-49
gi|34860007|ref|XP_227510.2| similar to chromodomain helicase DN... 199 8e-49
gi|50796134|ref|XP_423840.1| PREDICTED: similar to chromodomain ... 199 8e-49
gi|15674024|ref|NP_268199.1| SWI/SNF family helicase [Lactococcu... 198 1e-48
gi|23105623|ref|ZP_00092079.1| COG0553: Superfamily II DNA/RNA h... 198 1e-48
gi|50807292|ref|XP_424556.1| PREDICTED: similar to chromodomain ... 197 2e-48
gi|32141133|ref|NP_733524.1| putative helicase [Streptomyces coe... 196 4e-48
gi|34785459|gb|AAH57604.1| Unknown (protein for MGC:67261) [Mus ... 196 4e-48
gi|15896547|ref|NP_349896.1| Superfamily II DNA/RNA helicases, S... 196 4e-48
gi|29377168|ref|NP_816322.1| Snf2 family protein [Enterococcus f... 196 5e-48
gi|19704495|ref|NP_604057.1| SWF/SNF family helicase [Fusobacter... 196 7e-48
gi|15896682|ref|NP_350031.1| DNA/RNA helicase, SNF2 [Clostridium... 195 9e-48
gi|30019888|ref|NP_831519.1| SWF/SNF family helicase [Bacillus c... 195 1e-47
gi|48782007|ref|ZP_00278580.1| COG0553: Superfamily II DNA/RNA h... 195 1e-47
gi|38105927|gb|EAA52297.1| hypothetical protein MG04989.4 [Magna... 194 2e-47
gi|23101871|ref|ZP_00088417.1| COG0553: Superfamily II DNA/RNA h... 194 2e-47
gi|18310607|ref|NP_562541.1| SWI/SNF family helicase [Clostridiu... 194 2e-47
gi|28869303|ref|NP_791922.1| helicase/SNF2 family domain protein... 194 2e-47
gi|21227581|ref|NP_633503.1| SWF/SNF family helicase [Methanosar... 194 3e-47
gi|38637850|ref|NP_942824.1| putative helicase, superfamily II [... 194 3e-47
gi|26554357|ref|NP_758291.1| helicase with SNF2 domain [Mycoplas... 194 3e-47
gi|23099744|ref|NP_693210.1| helicase [Oceanobacillus iheyensis ... 194 3e-47
gi|13507759|ref|NP_109708.1| similar to helicases [Mycoplasma pn... 194 3e-47
gi|28211487|ref|NP_782431.1| SWF/SNF family helicase [Clostridiu... 192 6e-47
gi|46189143|ref|ZP_00124369.2| COG0553: Superfamily II DNA/RNA h... 192 8e-47
gi|38233618|ref|NP_939385.1| SNF2/RAD54 family protein [Coryneba... 192 8e-47
gi|50257851|gb|EAL20552.1| hypothetical protein CNBE4720 [Crypto... 192 1e-46
gi|1769947|emb|CAA67095.1| SNF [Bacillus cereus] 191 1e-46
gi|46447118|ref|YP_008483.1| conserved hypothetical protein [Par... 191 1e-46
gi|9956001|gb|AAG01987.1| similar to Mus musculus lymphocyte spe... 191 2e-46
gi|32425420|gb|AAH15477.1| HELLS protein [Homo sapiens] 191 2e-46
gi|42407261|dbj|BAD10847.1| lymphoid specific helicase variant4 ... 191 2e-46
gi|50286955|ref|XP_445907.1| unnamed protein product [Candida gl... 191 2e-46
gi|25027819|ref|NP_737873.1| putative chromodomain helicase [Cor... 190 3e-46
gi|15674499|ref|NP_268673.1| putative SNF helicase [Streptococcu... 190 3e-46
gi|20089087|ref|NP_615162.1| helicase (SNF2 family) [Methanosarc... 190 3e-46
gi|50809422|ref|XP_424635.1| PREDICTED: similar to Probable chro... 190 3e-46
gi|32475836|ref|NP_868830.1| probable swi/snf family helicase 2 ... 190 4e-46
gi|6321289|ref|NP_011365.1| ATPase that forms a large complex, c... 190 4e-46
gi|42780946|ref|NP_978193.1| helicase, putative [Bacillus cereus... 189 5e-46
gi|21909786|ref|NP_664054.1| putative SNF helicase [Streptococcu... 189 5e-46
gi|19577362|emb|CAD28443.1| possible swi2/snf2-like protein [Asp... 189 5e-46
gi|42820703|emb|CAF32016.1| possible swi2/snf2-like protein [Asp... 189 5e-46
gi|19745454|ref|NP_606590.1| putative SNF helicase [Streptococcu... 189 5e-46
gi|17231890|ref|NP_488438.1| SNF2 helicase homolog [Nostoc sp. P... 189 5e-46
gi|42520462|ref|NP_966377.1| helicase, SNF2 family [Wolbachia en... 189 6e-46
gi|30261851|ref|NP_844228.1| helicase, putative [Bacillus anthra... 188 1e-45
gi|49481102|ref|YP_035985.1| helicase, SWF/SNF family [Bacillus ... 188 1e-45
gi|47219154|emb|CAG01817.1| unnamed protein product [Tetraodon n... 188 1e-45
gi|19704721|ref|NP_604283.1| SWF/SNF family helicase [Fusobacter... 188 1e-45
gi|47565536|ref|ZP_00236577.1| Snf2 family protein [Bacillus cer... 187 2e-45
gi|31793283|ref|NP_855776.1| PROBABLE HELICASE HELZ [Mycobacteri... 187 2e-45
gi|34495520|ref|NP_899735.1| probable SWI/SNF family helicase [C... 187 2e-45
gi|50424107|ref|XP_460638.1| unnamed protein product [Debaryomyc... 187 3e-45
gi|15841592|ref|NP_336629.1| helicase, SNF2/RAD54 family [Mycoba... 186 4e-45
gi|48824514|ref|ZP_00285879.1| COG0553: Superfamily II DNA/RNA h... 186 5e-45
gi|20809475|gb|AAH29381.1| HELLS protein [Homo sapiens] 186 5e-45
gi|50427841|ref|XP_462533.1| unnamed protein product [Debaryomyc... 186 5e-45
gi|33469139|ref|NP_115572.2| yeast INO80-like protein [Homo sapi... 186 7e-45
gi|6330933|dbj|BAA86573.1| KIAA1259 protein [Homo sapiens] 186 7e-45
gi|7022306|dbj|BAA91550.1| unnamed protein product [Homo sapiens] 185 9e-45
gi|34763541|ref|ZP_00144479.1| SWF/SNF family helicase [Fusobact... 185 9e-45
gi|17384048|emb|CAD13192.1| bA119K6.2.2 (helicase, lymphoid-spec... 185 9e-45
gi|38075621|ref|XP_355376.1| RIKEN cDNA 4632409L19 [Mus musculus] 185 9e-45
gi|11357327|pir||T45808 helicase-like protein - Arabidopsis thal... 185 9e-45
gi|38181513|gb|AAH61495.1| Unknown (protein for MGC:70257) [Mus ... 185 9e-45
gi|15609238|ref|NP_216617.1| helZ [Mycobacterium tuberculosis H3... 185 9e-45
gi|30694618|ref|NP_191289.2| transcriptional activator, putative... 185 9e-45
gi|37590263|gb|AAH59235.1| 4632409L19Rik protein [Mus musculus] 185 9e-45
gi|46438788|gb|EAK98114.1| hypothetical protein CaO19.12827 [Can... 185 1e-44
gi|46137411|ref|XP_390397.1| hypothetical protein FG10221.1 [Gib... 184 2e-44
>gi|17562600|ref|NP_504523.1| CHromoDomain protein, helicase Mi-2
like; chromatin remodeling protein, LEThal LET-418,
abnormal Eversion of VuLva EVL-11 (209.2 kD) (let-418)
[Caenorhabditis elegans]
gi|7499938|pir||T34239 hypothetical protein F26F12.7 - Caenorhabditis
elegans
gi|3294508|gb|AAC25894.1| Lethal protein 418 [Caenorhabditis elegans]
gi|11095333|gb|AAG29838.1| LET-418 [Caenorhabditis elegans]
Length = 1829
Score = 3089 bits (8009), Expect = 0.0
Identities = 1553/1829 (84%), Positives = 1553/1829 (84%)
Frame = +1
Query: 1 MSTEEDPSLVDAEESMEEGSVTQXXXXXXXXXXXXXXXXXXXPSEXXXXXXXXXXXXXXX 180
MSTEEDPSLVDAEESMEEGSVTQ PSE
Sbjct: 1 MSTEEDPSLVDAEESMEEGSVTQDATEETEEEEEQEQGDEAGPSERKRSSRKKGGKGGKK 60
Query: 181 XXXXXXXXXXXVEIPDPYNSTSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQI 360
VEIPDPYNSTSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQI
Sbjct: 61 GSKKSAAAASKVEIPDPYNSTSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQI 120
Query: 361 LEANPGTNVSKMYPMFQVKYKEYQDHMAAQGKPVQKQARGSKTPAVSTPVIPPRSXXXXX 540
LEANPGTNVSKMYPMFQVKYKEYQDHMAAQGKPVQKQARGSKTPAVSTPVIPPRS
Sbjct: 121 LEANPGTNVSKMYPMFQVKYKEYQDHMAAQGKPVQKQARGSKTPAVSTPVIPPRSAPTKT 180
Query: 541 XXXXXXXXXXXXXXXXQEFEAFIKQQEQLEDDLVKDXXXXXXXXXXXXXXXXXXXXXXXX 720
QEFEAFIKQQEQLEDDLVKD
Sbjct: 181 RSARRKRRDSDAPDSDQEFEAFIKQQEQLEDDLVKDKEDARIKRAAEREEKKKGALEAAR 240
Query: 721 XXXXXXXXXXXXXXNNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHC 900
NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHC
Sbjct: 241 AAKKAKLEKGEEAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHC 300
Query: 901 IEHGPEVVKEEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCP 1080
IEHGPEVVKEEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCP
Sbjct: 301 IEHGPEVVKEEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCP 360
Query: 1081 RCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVKWK 1260
RCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAML FFVKWK
Sbjct: 361 RCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLKPPRKMEPRREREFFVKWK 420
Query: 1261 YLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFEESVTSRHHSDNDPYKLRERFY 1440
YLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFEESVTSRHHSDNDPYKLRERFY
Sbjct: 421 YLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFEESVTSRHHSDNDPYKLRERFY 480
Query: 1441 QYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYWQ 1620
QYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYWQ
Sbjct: 481 QYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYWQ 540
Query: 1621 HRESKLNEDIPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQPDYVTETGG 1800
HRESKLNEDIPKNVQKMIAKHREAKGLPP YEVQPDYVTETGG
Sbjct: 541 HRESKLNEDIPKNVQKMIAKHREAKGLPPKEDEKKKKKREKIDIRKKYEVQPDYVTETGG 600
Query: 1801 KLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPL 1980
KLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPL
Sbjct: 601 KLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPL 660
Query: 1981 STIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMK 2160
STIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMK
Sbjct: 661 STIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMK 720
Query: 2161 FHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTP 2340
FHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTP
Sbjct: 721 FHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTP 780
Query: 2341 XXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRLKADVLT 2520
SKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRLKADVLT
Sbjct: 781 LQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRLKADVLT 840
Query: 2521 GMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYL 2700
GMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYL
Sbjct: 841 GMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYL 900
Query: 2701 FVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMED 2880
FVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMED
Sbjct: 901 FVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMED 960
Query: 2881 LCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIY 3060
LCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIY
Sbjct: 961 LCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIY 1020
Query: 3061 DSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLG 3240
DSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLG
Sbjct: 1021 DSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLG 1080
Query: 3241 GKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXXXXXXXXXRS 3420
GKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVW RS
Sbjct: 1081 GKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWDDAAVDALLDRS 1140
Query: 3421 NKEETPAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXXXXXXPDPDY 3600
NKEETPAGEDGEEKAEWQNEYLSSFKVASYQ PDPDY
Sbjct: 1141 NKEETPAGEDGEEKAEWQNEYLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDY 1200
Query: 3601 WEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSKQNQTQXXXXXNESYRGS 3780
WEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSKQNQTQ NESYRGS
Sbjct: 1201 WEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSKQNQTQDDDDDNESYRGS 1260
Query: 3781 DNGDGLNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAFYGAVMRWGMP 3960
DNGDGLNS MPPLMAKVNGQVEILGFNPRQRKAFYGAVMRWGMP
Sbjct: 1261 DNGDGLNSDEDDYDEKKKRRRDEEKMPPLMAKVNGQVEILGFNPRQRKAFYGAVMRWGMP 1320
Query: 3961 PQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNRQHVLG 4140
PQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNRQHVLG
Sbjct: 1321 PQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNRQHVLG 1380
Query: 4141 RIGLLSLVRRKVQEFEQYNGQWSMPEIQDEVLAKAANGSAQGSSRSTXXXXXXXXXXXXX 4320
RIGLLSLVRRKVQEFEQYNGQWSMPEIQDEVLAKAANGSAQGSSRST
Sbjct: 1381 RIGLLSLVRRKVQEFEQYNGQWSMPEIQDEVLAKAANGSAQGSSRSTPKPKEEPKEEPME 1440
Query: 4321 XXDATETVNGATSEPATDAESEQNAPVDEPMDTDXXXXXXXXXXXXXXXRAARPSFKFNI 4500
DATETVNGATSEPATDAESEQNAPVDEPMDTD RAARPSFKFNI
Sbjct: 1441 KEDATETVNGATSEPATDAESEQNAPVDEPMDTDEAKEPKEEPIETEKPRAARPSFKFNI 1500
Query: 4501 CDGGFTELHSLWANEEKVARNGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFNDIINDPR 4680
CDGGFTELHSLWANEEKVARNGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFNDIINDPR
Sbjct: 1501 CDGGFTELHSLWANEEKVARNGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFNDIINDPR 1560
Query: 4681 FSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQPDNVGPL 4860
FSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQPDNVGPL
Sbjct: 1561 FSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQPDNVGPL 1620
Query: 4861 AQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMKADVSRLPSTFTQL 5040
AQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMKADVSRLPSTFTQL
Sbjct: 1621 AQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMKADVSRLPSTFTQL 1680
Query: 5041 ATVTERLNMTERQILSRLTTKDEDAIANRSVLPPPGPFVTPILRQQMDGIQPKFAALYSK 5220
ATVTERLNMTERQILSRLTTKDEDAIANRSVLPPPGPFVTPILRQQMDGIQPKFAALYSK
Sbjct: 1681 ATVTERLNMTERQILSRLTTKDEDAIANRSVLPPPGPFVTPILRQQMDGIQPKFAALYSK 1740
Query: 5221 FMSENGXXXXXXXXXXXXXXXXXXXXPDDETQDSAEAPPVLSAEVNSDDSNXXXXXXXXX 5400
FMSENG PDDETQDSAEAPPVLSAEVNSDDSN
Sbjct: 1741 FMSENGERMEEDEPVEAEEEEGVKQEPDDETQDSAEAPPVLSAEVNSDDSNDVPSTSAAA 1800
Query: 5401 XXXXXXXXXXXPASAEDQAPTDEPEPMET 5487
PASAEDQAPTDEPEPMET
Sbjct: 1801 AVSSETAADAEPASAEDQAPTDEPEPMET 1829
>gi|39593093|emb|CAE64562.1| Hypothetical protein CBG09312
[Caenorhabditis briggsae]
Length = 1849
Score = 2644 bits (6854), Expect = 0.0
Identities = 1335/1865 (71%), Positives = 1444/1865 (76%), Gaps = 36/1865 (1%)
Frame = +1
Query: 1 MSTEEDPSLVDAEESMEEGSVTQXXXXXXXXXXXXXXXXXXXPSEXXXXXXXXXXXXXXX 180
MS EED ++V+ +ESMEEGSVTQ PS+
Sbjct: 1 MSAEEDTTIVE-DESMEEGSVTQEATEETEEEEDQDQGDEAGPSDRRRSSRKKGGKGAKK 59
Query: 181 XXXXXXXXXXXVEIPDPYNSTSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQI 360
EIPDPY ++SEEVCAAIGLTDV+FDYD EEFQGI+NLK FS+++K QI
Sbjct: 60 ASKKAAAAAAKAEIPDPYTASSEEVCAAIGLTDVQFDYDLEEFQGITNLKNFSAVVKAQI 119
Query: 361 LEANPGTNVSKMYPMFQVKYKEYQDHMAAQGKPVQKQARGSKTPAVSTPVIPPRSXXXXX 540
LEANPGTNVSK+YPM+QVKYKEYQDHM AQGKPVQKQ RGSKTPAV+TPV PPRS
Sbjct: 120 LEANPGTNVSKLYPMYQVKYKEYQDHMTAQGKPVQKQQRGSKTPAVATPVAPPRSAPTKT 179
Query: 541 XXXXXXXXXXXXXXXXQEFEAFIKQQEQLEDDLVKDXXXXXXXXXXXXXXXXXXXXXXXX 720
QEFE FIKQQEQLEDD VK+
Sbjct: 180 RSARKKRRDSEAPDSDQEFENFIKQQEQLEDDKVKEKEDAKVKRAVQKQEKKKEALEAAR 239
Query: 721 XXXXXXXXXXXXXXNNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHC 900
NND+CE CK GEL+LCDTCPRAYHT C+DE +PPEGDWSC HC
Sbjct: 240 AAKKAKLEQGEEVENNDFCETCKVGGELVLCDTCPRAYHTGCMDE---DPPEGDWSCPHC 296
Query: 901 IEHGPEVVKEEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCP 1080
IEHGPEV+KEEP KQND+FCKICKETENLLLCDSCVC+FHAYCIDPPLT+VP+EETW+CP
Sbjct: 297 IEHGPEVIKEEPTKQNDDFCKICKETENLLLCDSCVCAFHAYCIDPPLTQVPQEETWACP 356
Query: 1081 RCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVKWK 1260
RCE VKPE K EKILCWRWKEI YP+P+ G + DDA+L FF+KWK
Sbjct: 357 RCECVKPEQKSEKILCWRWKEISYPDPVPEGTVPTEDDALLKPPRKMAPRREREFFIKWK 416
Query: 1261 YLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFEESVTSRHHSDNDPYKLRERFY 1440
YLSYWQCSWVSEM+LEVHFRM ++Y+R+NDS+ PPEFEES SRHHSDNDPYKLRE++Y
Sbjct: 417 YLSYWQCSWVSEMMLEVHFRMQYMMYFRRNDSEIPPEFEESTASRHHSDNDPYKLREKYY 476
Query: 1441 QYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYWQ 1620
Q+G+KPEWMQIHRIINHQSYAKSQQDYLVKWKELSYD ATWERDD++IANYEEAIIKYWQ
Sbjct: 477 QFGVKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDAATWERDDADIANYEEAIIKYWQ 536
Query: 1621 HRESKLNEDIPKNVQKMIAKHREAKGLPPXXXXXXX-XXXXXXXXXXXYEVQPDYVTETG 1797
HRE LN+D+PKNVQKMIAKHREAKGLPP Y+VQPDYV+ETG
Sbjct: 537 HRERMLNDDVPKNVQKMIAKHREAKGLPPKEEESRRPKKREKVDIRKKYDVQPDYVSETG 596
Query: 1798 GKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAP 1977
G LHPYQLEG+NWLRHCWSNGTDAILADEMGLGKTVQSLTFLY+LMKEGHCKGPFLIAAP
Sbjct: 597 GNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHCKGPFLIAAP 656
Query: 1978 LSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENM 2157
LSTIINWEREAEQWCPDFYVVTYVG RD+RVVLREHEFSFV+GAVR+GPKA +MKTT+N+
Sbjct: 657 LSTIINWEREAEQWCPDFYVVTYVGDRDSRVVLREHEFSFVDGAVRTGPKAGRMKTTDNL 716
Query: 2158 KFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGT 2337
KFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGT
Sbjct: 717 KFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGT 776
Query: 2338 PXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRLKADVL 2517
P SKERFNQLEAFTAEF+EISKEDQIEKLHNLLGPHMLRRLKADVL
Sbjct: 777 PLQNNLEELFHLLNFLSKERFNQLEAFTAEFSEISKEDQIEKLHNLLGPHMLRRLKADVL 836
Query: 2518 TGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPY 2697
TGMPSKSELIVRVELS MQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPY
Sbjct: 837 TGMPSKSELIVRVELSQMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPY 896
Query: 2698 LFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIME 2877
LFVKA LEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKD GHRVLIFSQMT M+DI+E
Sbjct: 897 LFVKASLEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDTGHRVLIFSQMTMMMDILE 956
Query: 2878 DLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVII 3057
D C+ EGY+YERIDGSI GQMRQDAIDRYNAPGAQQF+FLLSTRAGGLGINLATADTVII
Sbjct: 957 DFCDVEGYKYERIDGSITGQMRQDAIDRYNAPGAQQFVFLLSTRAGGLGINLATADTVII 1016
Query: 3058 YDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGL 3237
YDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTK SVEE+IT+VAKKKMLLNHLVVRAGL
Sbjct: 1017 YDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKNSVEERITTVAKKKMLLNHLVVRAGL 1076
Query: 3238 GGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEG----EGSEKKGAAAQEIVWXXXXXXX 3405
GGKEGK+MSKTELDDVLRWGTEELF ED AEG EG+EKKG QEIVW
Sbjct: 1077 GGKEGKSMSKTELDDVLRWGTEELFKEDEAVAEGAEGAEGAEKKG-TTQEIVWDDAAVDF 1135
Query: 3406 XXXRSNKEET-PAGEDGEEKAEWQNEYLSSFKVASYQX-XXXXXXXXXXXXXXXXXXXXX 3579
R KEET P EDGE KA+WQNEYLSSFKVASYQ
Sbjct: 1136 LLDRDKKEETGPGPEDGEGKADWQNEYLSSFKVASYQTKEAEGQEEEEEDEIEVMKEGDE 1195
Query: 3580 XXPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSKQNQTQXXXXX 3759
PDPDYWEKLLKHHYEQD+EIE QKLGKGKRVRKQINYASENMGTDWSKQNQ Q
Sbjct: 1196 KEPDPDYWEKLLKHHYEQDKEIEAQKLGKGKRVRKQINYASENMGTDWSKQNQPQEDDDD 1255
Query: 3760 NESYRGSDNGDGLNS--XXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAFY 3933
NESY GSDNGD LNS MPPLMAKVNGQVEILGFNPRQRKAFY
Sbjct: 1256 NESYHGSDNGDPLNSDDDDYDEKRKKRRDENNEKMPPLMAKVNGQVEILGFNPRQRKAFY 1315
Query: 3934 GAVMRWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPRE 4113
GAVMRWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPRE
Sbjct: 1316 GAVMRWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPRE 1375
Query: 4114 GLNRQHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEIQDEVLAKAANGSAQGSSRST---- 4281
GLNRQHVLGRIGLLSLVRRKV EFE +NG WSMPE+QDE+L+KAANGSA+ SSR++
Sbjct: 1376 GLNRQHVLGRIGLLSLVRRKVNEFEDFNGAWSMPEVQDEILSKAANGSAEESSRNSPKPK 1435
Query: 4282 -----------XXXXXXXXXXXXXXXDATETVNGAT---------SEPATDAESEQNAPV 4401
DA E+ + T +E A +A +E+
Sbjct: 1436 DVKEEVKEEKEATPVTTQDEPMEKTDDAMESTSEETPDAEKTSENTETAAEASAEEPVQK 1495
Query: 4402 DEPMDTDXXXXXXXXXXXXXXXRAARPSFKFNICDGGFTELHSLWANEEKVARNGKEYEI 4581
DEPM+T+ +AARP FKFNICDGGFTELH+LW NEEKVARNG+EYEI
Sbjct: 1496 DEPMETN--APVEEVKEEEKKPKAARPPFKFNICDGGFTELHALWTNEEKVARNGREYEI 1553
Query: 4582 WYRRHDYWLLAGVVVHGYGRFQANFNDIINDPRFSVLNEPFKEVGAEAT-GSDIKAKFMQ 4758
WYRRHDYWLLAGV++HGYGRFQANFNDIINDP+F++LNEPFKE GA+A +D+K+KFMQ
Sbjct: 1554 WYRRHDYWLLAGVMLHGYGRFQANFNDIINDPKFAILNEPFKEAGADAVISADLKSKFMQ 1613
Query: 4759 RRFKLIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRFADLENIAESQANIAKESSAGNR 4938
RRFKL+EQSLVIEEQLRRAAHANRHL PDNVGPLAQRFADLENIAESQANIAKES+AGNR
Sbjct: 1614 RRFKLLEQSLVIEEQLRRAAHANRHLTPDNVGPLAQRFADLENIAESQANIAKESAAGNR 1673
Query: 4939 NANAVLHKTLVQLDEILSDMKADVSRLPSTFTQLATVTERLNMTERQILSRLTTKDEDAI 5118
NANAVLHK LVQLDEILSDMK+DVSRLP+TFTQL++VTERLNMTERQILSRLTTKDEDA
Sbjct: 1674 NANAVLHKCLVQLDEILSDMKSDVSRLPATFTQLSSVTERLNMTERQILSRLTTKDEDAK 1733
Query: 5119 ANRSVLPPPGPFVTPILRQQMDGIQPKFAALYSKFMSENGXXXXXX--XXXXXXXXXXXX 5292
A R+ +PPPGPFVTP+LRQQMDGIQPKFAALYSKFMSENG
Sbjct: 1734 AGRTPIPPPGPFVTPVLRQQMDGIQPKFAALYSKFMSENGERMEEDEPVQAEPEDVPVKE 1793
Query: 5293 XXPDDETQDSAEAPPVLSAEVNSDDSNXXXXXXXXXXXXXXXXXXXXPASAEDQAPTDEP 5472
D E D+ E PPVLSAE N+++ A ++ EP
Sbjct: 1794 EQEDGENADAGETPPVLSAEDNTEEGG---------ETASQAEPEANQAVEQEAEAEPEP 1844
Query: 5473 EPMET 5487
EPMET
Sbjct: 1845 EPMET 1849
>gi|17569817|ref|NP_510140.1| CHromoDomain protein, DNA binding
helicase Mi-2 like, required for vulval cell fate
determination (205.3 kD) (chd-3) [Caenorhabditis elegans]
gi|6165993|sp|Q22516|CHD3_CAEEL Chromodomain helicase-DNA-binding
protein 3 homolog (CHD-3)
gi|7507846|pir||T20160 hypothetical protein T14G8.1 - Caenorhabditis
elegans
gi|3875165|emb|CAA91798.1| Hypothetical protein T14G8.1
[Caenorhabditis elegans]
gi|3879819|emb|CAA91810.1| Hypothetical protein T14G8.1
[Caenorhabditis elegans]
gi|11095331|gb|AAG29837.1| CHD-3 [Caenorhabditis elegans]
Length = 1787
Score = 2192 bits (5679), Expect = 0.0
Identities = 1098/1692 (64%), Positives = 1259/1692 (73%), Gaps = 26/1692 (1%)
Frame = +1
Query: 217 EIPDPYNSTSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKM 396
+ PDPY STS E+ AAIGLTDV+ DY++EEFQ I+NLK FSS++KP IL+ NPGTNV+KM
Sbjct: 75 DYPDPYKSTSAEISAAIGLTDVDVDYEQEEFQSITNLKNFSSLVKPYILKVNPGTNVTKM 134
Query: 397 YPMFQVKYKEYQDHMAAQGKPVQKQARGSKTPAVSTPVIPPRSXXXXXXXXXXXXXXXXX 576
YP+FQVKYKE+QDHM A GK +QKQ R P V PV P
Sbjct: 135 YPLFQVKYKEFQDHMTAHGKSIQKQQRAKFVP-VPVPVTPQEKIIPQKTRSSARRKRRDG 193
Query: 577 XX-------XXQEFEAFIKQQEQLEDDLVKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 735
QEFEA IKQ E+ +D+ K
Sbjct: 194 SDGEGGGHDSDQEFEALIKQHEKQQDEAEKGKEEARINRAAAKVDKRKAALESARASKRA 253
Query: 736 XXXXXXXXXNN-DYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHG 912
N+ + CE C QDGEL+LCDTC RAYH CIDENME+PPEGDWSC HC EHG
Sbjct: 254 RKEQGVVEENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCEEHG 313
Query: 913 PEV--VKEEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRC 1086
P+V V+EEPAK N ++C+ICKET N+LLCD+C S+HAYCIDPPLTE+P+ E WSCPRC
Sbjct: 314 PDVLIVEEEPAKANMDYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGE-WSCPRC 372
Query: 1087 ETVKPEHKIEKILCWRWKEIPYPEPLEA--GKEASSDDAMLXXXXXXXXXXXXXFFVKWK 1260
+P +IEKIL WRWKEI YPEPLE G+EAS DD L FFVKWK
Sbjct: 373 IIPEPAQRIEKILSWRWKEISYPEPLECKEGEEASKDDVFLKPPRKMEPRREREFFVKWK 432
Query: 1261 YLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFEESVTSRHHSDNDPYKLRERFY 1440
YL+YWQC W+SE L++V+F L+ +YWRK DS+ PP FEES SRHHSD+DPYKLRERFY
Sbjct: 433 YLAYWQCEWLSETLMDVYFTALVRMYWRKVDSENPPIFEESTLSRHHSDHDPYKLRERFY 492
Query: 1441 QYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYWQ 1620
QYG+KPEWMQIHRIINH SYAKSQQDYLVKWKELSY+ ATWERDD++IANYE+AIIKYW
Sbjct: 493 QYGVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWERDDTDIANYEDAIIKYWH 552
Query: 1621 HRESKLNEDIPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXX--YEVQPDYVTET 1794
HRE LN+++P+NVQKMIAK REAKGL P YEVQPD+++ET
Sbjct: 553 HRERMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKKREKIDILKKYEVQPDFISET 612
Query: 1795 GGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAA 1974
GG LHPYQLEG+NWLRHCWSNGTDAILADEMGLGKTVQSLTFLY+LMKEGH KGPFLIAA
Sbjct: 613 GGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAA 672
Query: 1975 PLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTEN 2154
PLSTIINWEREAE WCPDFYVVTYVG R++R+V+REHEFSFV+GAVR GPK SK+KT EN
Sbjct: 673 PLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLEN 732
Query: 2155 MKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTG 2334
+KFHVLLTSYE INMDK ILSSI+W ALVVDEAHRLKNNQS FFKNL EY I YRVLLTG
Sbjct: 733 LKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTG 792
Query: 2335 TPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRLKADV 2514
TP + +RFNQLE+FTAEF+EISKEDQIEKLHNLLGPHMLRRLKADV
Sbjct: 793 TPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSEISKEDQIEKLHNLLGPHMLRRLKADV 852
Query: 2515 LTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHP 2694
LTGMPSK ELIVRVELSAMQKK+YKNILTRNFDALNVKNGGTQMSL+N++MELKKCCNHP
Sbjct: 853 LTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGTQMSLINIIMELKKCCNHP 912
Query: 2695 YLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIM 2874
YLF+KA LEAPK KNGMYEG+ALIKN+GKFVLLQKMLRKLKDGGHRVLIFSQMT MLDI+
Sbjct: 913 YLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDIL 972
Query: 2875 EDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVI 3054
ED C+ EGY+YERIDGSI GQ RQDAIDRYNAPGA+QF+FLLSTRAGGLGINLATADTVI
Sbjct: 973 EDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVI 1032
Query: 3055 IYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAG 3234
IYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTK SVEE+ITSVAKKKMLL HLVVRAG
Sbjct: 1033 IYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLVVRAG 1092
Query: 3235 LGGKEGKTMSKTELDDVLRWGTEELFSED---LDAAEGEGSEKKGAAAQEIVWXXXXXXX 3405
LG K+GK+MSKTELDDVLRWGTEELF E+ ++ A+GEG+ K QEIVW
Sbjct: 1093 LGAKDGKSMSKTELDDVLRWGTEELFKEEEAPVEGADGEGTSSKKPNEQEIVWDDAAVDF 1152
Query: 3406 XXXRSNKEETPAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXXXXXX 3585
R+ +EE G+DGE+K W NEYLSSFKVA+Y
Sbjct: 1153 LLDRNKEEE---GQDGEKKEHWTNEYLSSFKVATYN-TKEADDADDDEDETEVIKEGTEE 1208
Query: 3586 PDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSKQNQTQXXXXXNE 3765
DP+YWEKLLKHHYEQD+E ELQKLGKGKRVR+Q+NYASENMG DWS QN Q
Sbjct: 1209 QDPNYWEKLLKHHYEQDQETELQKLGKGKRVRRQVNYASENMGQDWSAQNNQQQEEDDGS 1268
Query: 3766 SYRGSDNGDGLNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAFYGAVM 3945
Y GSDNG+ L + +PPL+AKVNGQ+E+LGFNPRQRKAFY AVM
Sbjct: 1269 EY-GSDNGELLQTDEDYEERRRRREERSEKLPPLLAKVNGQIEVLGFNPRQRKAFYNAVM 1327
Query: 3946 RWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNR 4125
RWGMPPQD QS W VRDLRNKSEKVF+AY+SLFMRHLCEP D D+F DGVPREGLNR
Sbjct: 1328 RWGMPPQDLTQSSWQVRDLRNKSEKVFKAYSSLFMRHLCEPVVDNSDSFMDGVPREGLNR 1387
Query: 4126 QHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEIQDEVLAKAANGSAQGSSRSTXXXXXXXX 4305
Q VL RIGL+S++R+KVQEFE++NG+WSMPE ++++LA AA S
Sbjct: 1388 QAVLSRIGLMSILRKKVQEFEKFNGEWSMPETREKMLATAAQAS---------------- 1431
Query: 4306 XXXXXXXDATETVNGATSEPATDAESEQNAPVDE-PMDTDXXXXXXXXXXXXXXX----- 4467
++ P E+ +DE PMD D
Sbjct: 1432 ---------------VSNLPGMIKIKEEPIDIDETPMDVDQSNITKTEELASEVKVEEEP 1476
Query: 4468 RAARPSFKFNICDGGFTELHSLWANEEKVARNGKEYEIWYRRHDYWLLAGVVVHGYGRFQ 4647
+A R +KFNICDGG+TELHSLW NEEKVARNGKEYEIW+RRHD+WLLA V V+GYGR+Q
Sbjct: 1477 KAPRLPYKFNICDGGYTELHSLWINEEKVARNGKEYEIWHRRHDFWLLAAVAVYGYGRYQ 1536
Query: 4648 ANFNDIINDPRFSVLNEPFKEVGAE-ATG-SDIKAKFMQRRFKLIEQSLVIEEQLRRAAH 4821
NF DI+NDP+FS++NEPFK+ GA+ AT +D+K KF+ RRFKL+EQSLVIEEQLRRAAH
Sbjct: 1537 INFQDIMNDPKFSIVNEPFKQTGADPATNFADVKNKFLARRFKLLEQSLVIEEQLRRAAH 1596
Query: 4822 ANRHLQPDNVGPLAQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMK 5001
N+ PD VG LAQ F++LE+ A++ NIA+ES+ GNRNANA+LHK L QLD++LSD+K
Sbjct: 1597 INKQQSPDQVGQLAQHFSELEHTADAHVNIARESNNGNRNANAILHKCLAQLDDLLSDLK 1656
Query: 5002 ADVSRLPSTFTQLATVTERLNMTERQILSRL-TTKDEDAIANRSVLPPPGPFVTPILRQQ 5178
DV+RLP+T +Q+ VTERL M+ERQILSRL KD DA ++ LPP GPF+TP+ Q
Sbjct: 1657 TDVARLPATISQVRPVTERLQMSERQILSRLVVAKDPDAAPSKPALPPSGPFITPLFNQN 1716
Query: 5179 MDGIQPKFAALY 5214
IQPKF +L+
Sbjct: 1717 FTTIQPKFPSLF 1728
>gi|28422180|gb|AAH46866.1| B230399n07-prov protein [Xenopus laevis]
Length = 1893
Score = 1479 bits (3830), Expect = 0.0
Identities = 795/1555 (51%), Positives = 983/1555 (63%), Gaps = 108/1555 (6%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPE-VVKEEPA 939
+ DYCE C+Q GE++LCDTCPRAYH VC+D +M++ PEG WSC HC + G + KE+ +
Sbjct: 360 HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMDKAPEGKWSCPHCEKEGVQWEAKEDNS 419
Query: 940 KQND----------------EFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETW 1071
+ +D EFC++CK+ LL CD C S+H +C++PPL E+P E W
Sbjct: 420 ELDDDLDDAVGDPEEEDHHMEFCRVCKDGGELLCCDVCPSSYHIHCLNPPLPEIPNGE-W 478
Query: 1072 SCPRCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFV 1251
CPRC + KI+KIL W+W + P P P+ ++ D A L FFV
Sbjct: 479 LCPRCTCPPLKGKIQKILTWKWGQPPPPTPVSRPADSDPDAAPLKPLEGRPERE---FFV 535
Query: 1252 KWKYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPE----FEESVTSRHHSDNDP- 1416
KW +SY CSWV+E+ LE+H +++ Y RKND D PP +E SR + DP
Sbjct: 536 KWHAMSYLHCSWVTELQLELHCQVMFRNYQRKNDMDEPPAGDYGVDEEEKSRKRKNKDPK 595
Query: 1417 -YKLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANY 1593
++ E+FY+YGIKPEWM IHR++NH K YL+KW++L+YDQA+WE ++S+I +Y
Sbjct: 596 YLEMEEKFYRYGIKPEWMMIHRVLNHSVDKKGYVHYLIKWRDLAYDQASWEAEESDIQDY 655
Query: 1594 EEAIIKYWQHRESKLNED--IPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYE 1767
+ YW HRE ++ K V+K+ + + PP Y+
Sbjct: 656 DIYKQGYWNHRELMCGDEGRPGKKVKKVKLRKLDR---PPDTPAVDPTVK--------YD 704
Query: 1768 VQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGH 1947
QPDY+ TGG LHPYQLEGLNWLR W+ GTD ILADEMGLGKTVQ+ FLYSL KEGH
Sbjct: 705 RQPDYLDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGH 764
Query: 1948 CKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPK 2127
KGPFL++APLSTIINWERE E W PD YVVTYVG +D+R V+RE+EFSF A+R G K
Sbjct: 765 SKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEGNAIRGGKK 824
Query: 2128 ASKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYT 2307
AS+MK ++KFHVLLTSYE I +D +L SI+W LVVDEAHRLKNNQS FF+ LN Y
Sbjct: 825 ASRMKKEASVKFHVLLTSYELITIDTAVLGSIDWACLVVDEAHRLKNNQSKFFRVLNGYP 884
Query: 2308 IHYRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPH 2487
+ +++LLTGTP + ERFN LE F EF +I+KEDQI+KLH++LGPH
Sbjct: 885 LQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQIKKLHDMLGPH 944
Query: 2488 MLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLM 2667
MLRRLKADV MPSK+ELIVRVELS MQKK+YK ILTRNF+ALN + GG Q+SL+NV+M
Sbjct: 945 MLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKFILTRNFEALNTRGGGNQVSLLNVVM 1004
Query: 2668 ELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFS 2847
+LKKCCNHPYLF A +EAPK NGMY+G+ALIK +GK LLQKMLRKLKD GHRVLIFS
Sbjct: 1005 DLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIKGAGKLFLLQKMLRKLKDDGHRVLIFS 1064
Query: 2848 QMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGI 3027
QMT+MLD++ED E+EGY+YERIDG I G MRQ+AIDR+NAPGAQQF FLLSTRAGGLGI
Sbjct: 1065 QMTKMLDLLEDFMEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1124
Query: 3028 NLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKML 3207
NLATADTV+IYDSDWNPHNDIQAFSRAHR+GQ KVMIYRFVT+ SVEE+IT VAKKKM+
Sbjct: 1125 NLATADTVVIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTRASVEERITQVAKKKMM 1184
Query: 3208 LNHLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWX 3387
L HLVVR GLG K G +MSK ELDD+L++GTEELF ++ A EG G K+G I +
Sbjct: 1185 LTHLVVRPGLGSKTG-SMSKQELDDILKFGTEELFKDE--ATEG-GENKEGEDISVIHYD 1240
Query: 3388 XXXXXXXXXRSNKEETPAGEDGEEKAEWQ---NEYLSSFKVASYQXXXXXXXXXXXXXXX 3558
R N++ET E+ E Q NEYLSSFKVA Y
Sbjct: 1241 DKAIARLLDR-NQDET-------EEPELQLGMNEYLSSFKVAQYVVREEEMGDEEEVVRE 1292
Query: 3559 XXXXXXXXXPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENM-GTDWSKQN 3735
DPDYWEKLL+HHYEQ +E + LGKGKR+RKQ+NY + DW
Sbjct: 1293 IIKQEESV--DPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQ 1350
Query: 3736 QTQXXXXXNESYRGSDNGDGLNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPR 3915
S G ++ D + +PPL+A+V G +E+LGFN R
Sbjct: 1351 SDNQSDYSVASEEGDEDFDERSEAARRPNRKGLRNDKDKPLPPLLARVGGNIEVLGFNAR 1410
Query: 3916 QRKAFYGAVMRWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFN 4095
QRKAF A+MR+GMPPQD+ +QWLVRDLR KSEK F+AY SLFMRHLCEPGADG +TF
Sbjct: 1411 QRKAFLNAIMRYGMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFA 1470
Query: 4096 DGVPREGLNRQHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEIQ-----------DEVLAK 4242
DGVPREGL+RQHVL RIG++SL+R+KVQEFE NG+WSMPE+ D K
Sbjct: 1471 DGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHVNGRWSMPELAEAEENKMASKIDSPSPK 1530
Query: 4243 AANGSAQGSSRSTXXXXXXXXXXXXXXXDA-------------TETVNGATS------EP 4365
S G ++ + TE N T P
Sbjct: 1531 TPTSSTPGDTQPNTPAPPASNEDSTKSEEVPVKEETTDNEVKPTEENNETTQPTPDTQSP 1590
Query: 4366 ATDAESEQNAPVD-----------------EPMDTDXX---------------------- 4428
A E ++ PV EPM+TD
Sbjct: 1591 AAQTEEKKEEPVQQERTSPPPPPPPPPPAPEPMETDQKPEPEKVDEVITLDDKKDDVQEV 1650
Query: 4429 --------XXXXXXXXXXXXXRAARPSFKFNICDGGFTELHSLWANEEKVAR-NGKEYEI 4581
AA+ F FNI DGGFTELHSLW NEE+ A K YEI
Sbjct: 1651 TLQNGETPKETAEEKTKKASAAAAKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEI 1710
Query: 4582 WYRRHDYWLLAGVVVHGYGRFQANFNDIINDPRFSVLNEPFKEVGAEATGSDIKAKFMQR 4761
W+RRHDYWLL+G++ HGY R+Q DI ND R+++LNEPFK +IK KF+ R
Sbjct: 1711 WHRRHDYWLLSGIITHGYARWQ----DIQNDVRYAILNEPFKGEVNRGNFLEIKNKFLAR 1766
Query: 4762 RFKLIEQSLVIEEQLRRAAHANRHLQPDNVG-PLAQRFADLENIAESQANIAKESSAGNR 4938
RFKL+EQ+LVIEEQLRRAA+ N P + L RFA++E +AES +++KES AGN+
Sbjct: 1767 RFKLLEQALVIEEQLRRAAYLNMSEDPSHPSMALNTRFAEVECLAESHQHLSKESMAGNK 1826
Query: 4939 NANAVLHKTLVQLDEILSDMKADVSRLPSTFTQLATVTERLNMTERQILSRLTTK 5103
ANAVLHK L QL+E+LSDMKADV+RLP+T ++ V RL M+ER ILSRL ++
Sbjct: 1827 PANAVLHKVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLASR 1881
Score = 44.3 bits (103), Expect = 0.034
Identities = 18/62 (29%), Positives = 36/62 (58%)
Frame = +1
Query: 268 GLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKYKEYQDHMAA 447
G+ D++ + E++++ ++N K FS ++P I NP VSKM + K++E+ +
Sbjct: 143 GMEDIDHVFTEDDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPL 202
Query: 448 QG 453
+G
Sbjct: 203 KG 204
>gi|34858460|ref|XP_232354.2| similar to chromodomain helicase DNA
binding protein 4; Mi-2b [Rattus norvegicus]
Length = 1954
Score = 1283 bits (3320), Expect = 0.0
Identities = 651/1179 (55%), Positives = 807/1179 (68%), Gaps = 24/1179 (2%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHG---------- 912
+ DYCE C+Q GE++LCDTCPRAYH VC+D +ME+ PEG WSC HC + G
Sbjct: 369 HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNS 428
Query: 913 --PEVVKE---EPAKQND---EFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEET 1068
E+++E +P +++D EFC++CK+ LL CD+C S+H +C++PPL E+P E
Sbjct: 429 EGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGE- 487
Query: 1069 WSCPRCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFF 1248
W CPRC + K++KIL W+W + P P P+ +A D FF
Sbjct: 488 WLCPRCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDA---DPNTPSPKPLEGRPERQFF 544
Query: 1249 VKWKYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFE---ESVTSRHHSDNDPY 1419
VKW+ +SYW CSWVSE+ LE+H +++ Y RKND D PP + + SR + DP
Sbjct: 545 VKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNKDPK 604
Query: 1420 --KLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANY 1593
++ ERFY+YGIKPEWM IHRI+NH K YL+KW++L YDQA+WE +D I +Y
Sbjct: 605 FAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDY 664
Query: 1594 EEAIIKYWQHRESKLNEDIPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQ 1773
+ YW HRE E+ + K R+ + P YE Q
Sbjct: 665 DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVK---------YERQ 715
Query: 1774 PDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCK 1953
P+Y+ TGG LHPYQ+EGLNWLR W+ GTD ILADEMGLGKTVQ+ FLYSL KEGH K
Sbjct: 716 PEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSK 775
Query: 1954 GPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKAS 2133
GPFL++APLSTIINWERE E W PD YVVTYVG +D+R ++RE+EFSF + A+R G KAS
Sbjct: 776 GPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKAS 835
Query: 2134 KMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIH 2313
+MK ++KFHVLLTSYE I +D IL SI+W L+VDEAHRLKNNQS FF+ LN Y++
Sbjct: 836 RMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQ 895
Query: 2314 YRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHML 2493
+++LLTGTP + ERF+ LE F EF +I+KEDQI+KLH++LGPHML
Sbjct: 896 HKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHML 955
Query: 2494 RRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMEL 2673
RRLKADV MPSK+ELIVRVELS MQKK+YK ILTRNF+ALN + GG Q+SL+NV+M+L
Sbjct: 956 RRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDL 1015
Query: 2674 KKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQM 2853
KKCCNHPYLF A +EAPK NGMY+G+ALI+ SGK +LLQKML+ LK+GGHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075
Query: 2854 TRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINL 3033
T+MLD++ED E+EGY+YERIDG I G MRQ+AIDR+NAPGAQQF FLLSTRAGGLGINL
Sbjct: 1076 TKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL 1135
Query: 3034 ATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLN 3213
ATADTVIIYDSDWNPHNDIQAFSRAHR+GQ KVMIYRFVT+ SVEE+IT VAKKKM+L
Sbjct: 1136 ATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLT 1195
Query: 3214 HLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXX 3393
HLVVR GLG K G +MSK ELDD+L++GTEELF + +A +G G K+G + I +
Sbjct: 1196 HLVVRPGLGSKTG-SMSKQELDDILKFGTEELFKD--EATDGGGDNKEGEDSSVIHYDDK 1252
Query: 3394 XXXXXXXRSNKEETPAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXX 3573
R N++ET ED E + NEYLSSFKVA Y
Sbjct: 1253 AIERLLDR-NQDET---EDTE--LQGMNEYLSSFKVAQY--VVREEEMGEEEEVEREIIK 1304
Query: 3574 XXXXPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENM-GTDWSKQNQTQXX 3750
DPDYWEKLL+HHYEQ +E + LGKGKR+RKQ+NY + DW
Sbjct: 1305 QEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQS 1364
Query: 3751 XXXNESYRGSDNGDGLNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAF 3930
S G ++ D + +PPL+A+V G +E+LGFN RQRKAF
Sbjct: 1365 DYSVASEEGDEDFDERSEAPRRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAF 1424
Query: 3931 YGAVMRWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPR 4110
A+MR+GMPPQD+ +QWLVRDLR KSEK F+AY SLFMRHLCEPGADG +TF DGVPR
Sbjct: 1425 LNAIMRYGMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPR 1484
Query: 4111 EGLNRQHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEIQD 4227
EGL+RQHVL RIG++SL+R+KVQEFE NG+WSMPE+ +
Sbjct: 1485 EGLSRQHVLTRIGVMSLIRKKVQEFEHVNGRWSMPELAE 1523
Score = 241 bits (616), Expect = 1e-61
Identities = 131/235 (55%), Positives = 162/235 (68%), Gaps = 2/235 (0%)
Frame = +1
Query: 4486 FKFNICDGGFTELHSLWANEEKVAR-NGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFND 4662
F FNI DGGFTELHSLW NEE+ A K YEIW+RRHDYWLLAG++ HGY R+Q D
Sbjct: 1699 FMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIINHGYARWQ----D 1754
Query: 4663 IINDPRFSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQP 4842
I NDPR+++LNEPFK +IK KF+ RRFKL+EQ+LVIEEQLRRAA+ N P
Sbjct: 1755 IQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMSEDP 1814
Query: 4843 DNVG-PLAQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMKADVSRL 5019
+ L RFA++E +AES +++KES AGN+ ANAVLHK L QL+E+LSDMKADV+RL
Sbjct: 1815 SHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTRL 1874
Query: 5020 PSTFTQLATVTERLNMTERQILSRLTTKDEDAIANRSVLPPPGPFVTPILRQQMD 5184
P+T ++ V RL M+ER ILSRL ANR+ PPP ++ Q D
Sbjct: 1875 PATIARIPPVAVRLQMSERNILSRL--------ANRAPEPPPQQVAPAAVKTQSD 1921
Score = 45.8 bits (107), Expect = 0.012
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Frame = +1
Query: 268 GLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKYKEYQDHMAA 447
G+ D++ + EE+++ ++N K FS ++P I NP VSKM + K++E+ +
Sbjct: 159 GMEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPF 218
Query: 448 QGKPVQKQARGS-------KTPAVSTPVIPP 519
+G A + ++ +T V PP
Sbjct: 219 KGSSGASVAAAAAAAVAVVESMVTATEVAPP 249
>gi|39204553|ref|NP_666091.1| chromodomain helicase DNA binding
protein 4; Mi-2 beta [Mus musculus]
gi|35193271|gb|AAH58578.1| Chromodomain helicase DNA binding protein
4 [Mus musculus]
Length = 1915
Score = 1283 bits (3320), Expect = 0.0
Identities = 651/1179 (55%), Positives = 807/1179 (68%), Gaps = 24/1179 (2%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHG---------- 912
+ DYCE C+Q GE++LCDTCPRAYH VC+D +ME+ PEG WSC HC + G
Sbjct: 362 HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNS 421
Query: 913 --PEVVKE---EPAKQND---EFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEET 1068
E+++E +P +++D EFC++CK+ LL CD+C S+H +C++PPL E+P E
Sbjct: 422 EGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGE- 480
Query: 1069 WSCPRCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFF 1248
W CPRC + K++KIL W+W + P P P+ +A D FF
Sbjct: 481 WLCPRCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDA---DPNTPSPKPLEGRPERQFF 537
Query: 1249 VKWKYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFE---ESVTSRHHSDNDPY 1419
VKW+ +SYW CSWVSE+ LE+H +++ Y RKND D PP + + SR + DP
Sbjct: 538 VKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNKDPK 597
Query: 1420 --KLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANY 1593
++ ERFY+YGIKPEWM IHRI+NH K YL+KW++L YDQA+WE +D I +Y
Sbjct: 598 FAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDY 657
Query: 1594 EEAIIKYWQHRESKLNEDIPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQ 1773
+ YW HRE E+ + K R+ + P YE Q
Sbjct: 658 DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVK---------YERQ 708
Query: 1774 PDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCK 1953
P+Y+ TGG LHPYQ+EGLNWLR W+ GTD ILADEMGLGKTVQ+ FLYSL KEGH K
Sbjct: 709 PEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSK 768
Query: 1954 GPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKAS 2133
GPFL++APLSTIINWERE E W PD YVVTYVG +D+R ++RE+EFSF + A+R G KAS
Sbjct: 769 GPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKAS 828
Query: 2134 KMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIH 2313
+MK ++KFHVLLTSYE I +D IL SI+W L+VDEAHRLKNNQS FF+ LN Y++
Sbjct: 829 RMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQ 888
Query: 2314 YRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHML 2493
+++LLTGTP + ERF+ LE F EF +I+KEDQI+KLH++LGPHML
Sbjct: 889 HKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHML 948
Query: 2494 RRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMEL 2673
RRLKADV MPSK+ELIVRVELS MQKK+YK ILTRNF+ALN + GG Q+SL+NV+M+L
Sbjct: 949 RRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDL 1008
Query: 2674 KKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQM 2853
KKCCNHPYLF A +EAPK NGMY+G+ALI+ SGK +LLQKML+ LK+GGHRVLIFSQM
Sbjct: 1009 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1068
Query: 2854 TRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINL 3033
T+MLD++ED E+EGY+YERIDG I G MRQ+AIDR+NAPGAQQF FLLSTRAGGLGINL
Sbjct: 1069 TKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL 1128
Query: 3034 ATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLN 3213
ATADTVIIYDSDWNPHNDIQAFSRAHR+GQ KVMIYRFVT+ SVEE+IT VAKKKM+L
Sbjct: 1129 ATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLT 1188
Query: 3214 HLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXX 3393
HLVVR GLG K G +MSK ELDD+L++GTEELF + +A +G G K+G + I +
Sbjct: 1189 HLVVRPGLGSKTG-SMSKQELDDILKFGTEELFKD--EATDGGGDNKEGEDSSVIHYDDK 1245
Query: 3394 XXXXXXXRSNKEETPAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXX 3573
R N++ET ED E + NEYLSSFKVA Y
Sbjct: 1246 AIERLLDR-NQDET---EDTE--LQGMNEYLSSFKVAQY--VVREEEMGEEEEVEREIIK 1297
Query: 3574 XXXXPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENM-GTDWSKQNQTQXX 3750
DPDYWEKLL+HHYEQ +E + LGKGKR+RKQ+NY + DW
Sbjct: 1298 QEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQS 1357
Query: 3751 XXXNESYRGSDNGDGLNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAF 3930
S G ++ D + +PPL+A+V G +E+LGFN RQRKAF
Sbjct: 1358 DYSVASEEGDEDFDERSEAPRRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAF 1417
Query: 3931 YGAVMRWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPR 4110
A+MR+GMPPQD+ +QWLVRDLR KSEK F+AY SLFMRHLCEPGADG +TF DGVPR
Sbjct: 1418 LNAIMRYGMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPR 1477
Query: 4111 EGLNRQHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEIQD 4227
EGL+RQHVL RIG++SL+R+KVQEFE NG+WSMPE+ +
Sbjct: 1478 EGLSRQHVLTRIGVMSLIRKKVQEFEHVNGRWSMPELAE 1516
Score = 240 bits (612), Expect = 3e-61
Identities = 129/226 (57%), Positives = 160/226 (70%), Gaps = 2/226 (0%)
Frame = +1
Query: 4474 ARPSFKFNICDGGFTELHSLWANEEKVAR-NGKEYEIWYRRHDYWLLAGVVVHGYGRFQA 4650
++ F FNI DGGFTELHSLW NEE+ A K YEIW+RRHDYWLLAG++ HGY R+Q
Sbjct: 1695 SKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIINHGYARWQ- 1753
Query: 4651 NFNDIINDPRFSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANR 4830
DI NDPR+++LNEPFK +IK KF+ RRFKL+EQ+LVIEEQLRRAA+ N
Sbjct: 1754 ---DIQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNM 1810
Query: 4831 HLQPDNVG-PLAQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMKAD 5007
P + L RFA++E +AES +++KES AGN+ ANAVLHK L QL+E+LSDMKAD
Sbjct: 1811 SEDPSHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKAD 1870
Query: 5008 VSRLPSTFTQLATVTERLNMTERQILSRLTTKDEDAIANRSVLPPP 5145
V+RLP+T ++ V RL M+ER ILSRL ANR+ PPP
Sbjct: 1871 VTRLPATIARIPPVAVRLQMSERNILSRL--------ANRAPEPPP 1908
Score = 45.8 bits (107), Expect = 0.012
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Frame = +1
Query: 268 GLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKYKEYQDHMAA 447
G+ D++ + EE+++ ++N K FS ++P I NP VSKM + K++E+ +
Sbjct: 152 GMEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPF 211
Query: 448 QGKPVQKQARGS-------KTPAVSTPVIPP 519
+G A + ++ +T V PP
Sbjct: 212 KGSSGASVAAAAAAAVAVVESMVTATEVAPP 242
>gi|4557453|ref|NP_001264.1| chromodomain helicase DNA binding protein
4; Mi-2b [Homo sapiens]
gi|5921744|sp|Q14839|CHD4_HUMAN Chromodomain helicase-DNA-binding
protein 4 (CHD-4) (Mi-2 autoantigen 218 kDa protein)
(Mi2-beta)
gi|1107696|emb|CAA60384.1| Mi-2 protein [Homo sapiens]
Length = 1912
Score = 1280 bits (3312), Expect = 0.0
Identities = 650/1179 (55%), Positives = 803/1179 (67%), Gaps = 24/1179 (2%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHG---------- 912
+ DYCE C+Q GE++LCDTCPRAYH VC+D +ME+ PEG WSC HC + G
Sbjct: 369 HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNS 428
Query: 913 --PEVVKE------EPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEET 1068
E+++E E + EFC++CK+ LL CD+C S+H +C++PPL E+P E
Sbjct: 429 EGEEILEEVGGDLEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGE- 487
Query: 1069 WSCPRCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFF 1248
W CPRC + K++KIL W+W + P P P+ +A D FF
Sbjct: 488 WLCPRCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDA---DPNTPSPKPLEGRPERQFF 544
Query: 1249 VKWKYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFE---ESVTSRHHSDNDPY 1419
VKW+ +SYW CSWVSE+ LE+H +++ Y RKND D PP + + SR + DP
Sbjct: 545 VKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNKDPK 604
Query: 1420 --KLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANY 1593
++ ERFY+YGIKPEWM IHRI+NH K YL+KW++L YDQA+WE +D I +Y
Sbjct: 605 FAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDY 664
Query: 1594 EEAIIKYWQHRESKLNEDIPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQ 1773
+ YW HRE E+ + K R+ + P YE Q
Sbjct: 665 DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVK---------YERQ 715
Query: 1774 PDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCK 1953
P+Y+ TGG LHPYQ+EGLNWLR W+ GTD ILADEMGLGKTVQ+ FLYSL KEGH K
Sbjct: 716 PEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSK 775
Query: 1954 GPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKAS 2133
GPFL++APLSTIINWERE E W PD YVVTYVG +D+R ++RE+EFSF + A+R G KAS
Sbjct: 776 GPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKAS 835
Query: 2134 KMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIH 2313
+MK ++KFHVLLTSYE I +D IL SI+W L+VDEAHRLKNNQS FF+ LN Y++
Sbjct: 836 RMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQ 895
Query: 2314 YRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHML 2493
+++LLTGTP + ERF+ LE F EF +I+KEDQI+KLH++LGPHML
Sbjct: 896 HKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHML 955
Query: 2494 RRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMEL 2673
RRLKADV MPSK+ELIVRVELS MQKK+YK ILTRNF+ALN + GG Q+SL+NV+M+L
Sbjct: 956 RRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDL 1015
Query: 2674 KKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQM 2853
KKCCNHPYLF A +EAPK NGMY+G+ALI+ SGK +LLQKML+ LK+GGHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075
Query: 2854 TRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINL 3033
T+MLD++ED E+EGY+YERIDG I G MRQ+AIDR+NAPGAQQF FLLSTRAGGLGINL
Sbjct: 1076 TKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL 1135
Query: 3034 ATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLN 3213
ATADTVIIYDSDWNPHNDIQAFSRAHR+GQ KVMIYRFVT+ SVEE+IT VAKKKM+L
Sbjct: 1136 ATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLT 1195
Query: 3214 HLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXX 3393
HLVVR GLG K G +MSK ELDD+L++GTEELF + +A +G G K+G + I +
Sbjct: 1196 HLVVRPGLGSKTG-SMSKQELDDILKFGTEELFKD--EATDGGGDNKEGEDSSVIHYDDK 1252
Query: 3394 XXXXXXXRSNKEETPAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXX 3573
R N++ET ED E + NEYLSSFKVA Y
Sbjct: 1253 AIERLLDR-NQDET---EDTE--LQGMNEYLSSFKVAQY--VVREEEMGEEEEVEREIIK 1304
Query: 3574 XXXXPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENM-GTDWSKQNQTQXX 3750
DPDYWEKLL+HHYEQ +E + LGKGKR+RKQ+NY + DW
Sbjct: 1305 QEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQS 1364
Query: 3751 XXXNESYRGSDNGDGLNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAF 3930
S G ++ D + +PPL+A+V G +E+LGFN RQRKAF
Sbjct: 1365 DYSVASEEGDEDFDERSEAPRRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAF 1424
Query: 3931 YGAVMRWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPR 4110
A+MR+GMPPQD+ +QWLVRDLR KSEK F+AY SLFMRHLCEPGADG +TF DGVPR
Sbjct: 1425 LNAIMRYGMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPR 1484
Query: 4111 EGLNRQHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEIQD 4227
EGL+RQHVL RIG++SL+R+KVQEFE NG+WSMPE+ +
Sbjct: 1485 EGLSRQHVLTRIGVMSLIRKKVQEFEHVNGRWSMPELAE 1523
Score = 236 bits (603), Expect = 4e-60
Identities = 128/222 (57%), Positives = 157/222 (70%), Gaps = 2/222 (0%)
Frame = +1
Query: 4486 FKFNICDGGFTELHSLWANEEKVAR-NGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFND 4662
F FNI DGGFTELHSLW NEE+ A K YEIW+RRHDYWLLAG++ HGY R+Q D
Sbjct: 1696 FMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIINHGYARWQ----D 1751
Query: 4663 IINDPRFSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQP 4842
I NDPR+++LNEPFK +IK KF+ RRFKL+EQ+LVIEEQLRRAA+ N P
Sbjct: 1752 IQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMSEDP 1811
Query: 4843 DNVG-PLAQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMKADVSRL 5019
+ L RFA++E +AES +++KES AGN+ ANAVLHK L QL+E+LSDMKADV+RL
Sbjct: 1812 SHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTRL 1871
Query: 5020 PSTFTQLATVTERLNMTERQILSRLTTKDEDAIANRSVLPPP 5145
P+T ++ V RL M+ER ILSRL ANR+ P P
Sbjct: 1872 PATIARIPPVAVRLQMSERNILSRL--------ANRAPEPTP 1905
Score = 45.8 bits (107), Expect = 0.012
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Frame = +1
Query: 268 GLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKYKEYQDHMAA 447
G+ D++ + EE+++ ++N K FS ++P I NP VSKM + K++E+ +
Sbjct: 159 GMEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPF 218
Query: 448 QGKPVQKQARGS-------KTPAVSTPVIPP 519
+G A + ++ +T V PP
Sbjct: 219 KGSSGASVAAAAAAAVAVVESMVTATEVAPP 249
>gi|24047226|gb|AAH38596.1| CHD4 protein [Homo sapiens]
Length = 1937
Score = 1271 bits (3290), Expect = 0.0
Identities = 652/1207 (54%), Positives = 806/1207 (66%), Gaps = 52/1207 (4%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHG---------- 912
+ DYCE C+Q GE++LCDTCPRAYH VC+D +ME+ PEG WSC HC + G
Sbjct: 366 HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNS 425
Query: 913 --PEVVKE------EPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEET 1068
E+++E E + EFC++CK+ LL CD+C S+H +C++PPL E+P E
Sbjct: 426 EGEEILEEVGGDLEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGE- 484
Query: 1069 WSCPRCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFF 1248
W CPRC + K++KIL W+W + P P P+ +A D FF
Sbjct: 485 WLCPRCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDA---DPNTPSPKPLEGRPERQFF 541
Query: 1249 VKWKYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFE---ESVTSRHHSDNDPY 1419
VKW+ +SYW CSWVSE+ LE+H +++ Y RKND D PP + + SR + DP
Sbjct: 542 VKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNKDPK 601
Query: 1420 --KLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANY 1593
++ ERFY+YGIKPEWM IHRI+NH K YL+KW++L YDQA+WE +D I +Y
Sbjct: 602 FAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDY 661
Query: 1594 EEAIIKYWQHRESKLNEDIPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQ 1773
+ YW HRE E+ + K R+ + P YE Q
Sbjct: 662 DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVK---------YERQ 712
Query: 1774 PDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCK 1953
P+Y+ TGG LHPYQ+EGLNWLR W+ GTD ILADEMGLGKTVQ+ FLYSL KEGH K
Sbjct: 713 PEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSK 772
Query: 1954 GPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKAS 2133
GPFL++APLSTIINWERE E W PD YVVTYVG +D+R ++RE+EFSF + A+R G KAS
Sbjct: 773 GPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKAS 832
Query: 2134 KMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIH 2313
+MK ++KFHVLLTSYE I +D IL SI+W L+VDEAHRLKNNQS FF+ LN Y++
Sbjct: 833 RMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQ 892
Query: 2314 YRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHML 2493
+++LLTGTP + ERF+ LE F EF +I+KEDQI+KLH++LGPHML
Sbjct: 893 HKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHML 952
Query: 2494 RRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMEL 2673
RRLKADV MPSK+ELIVRVELS MQKK+YK ILTRNF+ALN + GG Q+SL+NV+M+L
Sbjct: 953 RRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDL 1012
Query: 2674 KKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQM 2853
KKCCNHPYLF A +EAPK NGMY+G+ALI+ SGK +LLQKML+ LK+GGHRVLIFSQM
Sbjct: 1013 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1072
Query: 2854 TRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINL 3033
T+MLD++ED E+EGY+YERIDG I G MRQ+AIDR+NAPGAQQF FLLSTRAGGLGINL
Sbjct: 1073 TKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL 1132
Query: 3034 ATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLN 3213
ATADTVIIYDSDWNPHNDIQAFSRAHR+GQ KVMIYRFVT+ SVEE+IT VAKKKM+L
Sbjct: 1133 ATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLT 1192
Query: 3214 HLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXX 3393
HLVVR GLG K G +MSK ELDD+L++GTEELF ++ A +G G K+G + I +
Sbjct: 1193 HLVVRPGLGSKTG-SMSKQELDDILKFGTEELFKDE--ATDGGGDNKEGEDSSVIHYDDK 1249
Query: 3394 XXXXXXXRSNKEETPAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXX 3573
R N++ET ED E + NEYLSSFKVA Y
Sbjct: 1250 AIERLLDR-NQDET---EDTE--LQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQE 1303
Query: 3574 XXXXPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINY---ASENMGT--------- 3717
DPDYWEKLL+HHYEQ +E + LGKGKR+RKQ+NY + E+ G
Sbjct: 1304 ESV--DPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRGVCGRPRPPPM 1361
Query: 3718 -----------------DWSKQNQTQXXXXXNESYRGSDNGDGLNSXXXXXXXXXXXXXX 3846
DW S G ++ D +
Sbjct: 1362 GRSTRAVGPAHLPSLPPDWQDDQSDNQSDYSVASEEGDEDFDERSEAPRRPSRKGLRNDK 1421
Query: 3847 XXXMPPLMAKVNGQVEILGFNPRQRKAFYGAVMRWGMPPQDSHQSQWLVRDLRNKSEKVF 4026
+PPL+A+V G +E+LGFN RQRKAF A+MR+GMPPQD+ +QWLVRDLR KSEK F
Sbjct: 1422 DKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVRDLRGKSEKEF 1481
Query: 4027 RAYASLFMRHLCEPGADGHDTFNDGVPREGLNRQHVLGRIGLLSLVRRKVQEFEQYNGQW 4206
+AY SLFMRHLCEPGADG +TF DGVPREGL+RQHVL RIG++SL+R+KVQEFE NG+W
Sbjct: 1482 KAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHVNGRW 1541
Query: 4207 SMPEIQD 4227
SMPE+ +
Sbjct: 1542 SMPELAE 1548
Score = 236 bits (603), Expect = 4e-60
Identities = 128/222 (57%), Positives = 157/222 (70%), Gaps = 2/222 (0%)
Frame = +1
Query: 4486 FKFNICDGGFTELHSLWANEEKVAR-NGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFND 4662
F FNI DGGFTELHSLW NEE+ A K YEIW+RRHDYWLLAG++ HGY R+Q D
Sbjct: 1721 FMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIINHGYARWQ----D 1776
Query: 4663 IINDPRFSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQP 4842
I NDPR+++LNEPFK +IK KF+ RRFKL+EQ+LVIEEQLRRAA+ N P
Sbjct: 1777 IQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMSEDP 1836
Query: 4843 DNVG-PLAQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMKADVSRL 5019
+ L RFA++E +AES +++KES AGN+ ANAVLHK L QL+E+LSDMKADV+RL
Sbjct: 1837 SHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTRL 1896
Query: 5020 PSTFTQLATVTERLNMTERQILSRLTTKDEDAIANRSVLPPP 5145
P+T ++ V RL M+ER ILSRL ANR+ P P
Sbjct: 1897 PATIARIPPVAVRLQMSERNILSRL--------ANRAPEPTP 1930
Score = 45.8 bits (107), Expect = 0.012
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Frame = +1
Query: 268 GLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKYKEYQDHMAA 447
G+ D++ + EE+++ ++N K FS ++P I NP VSKM + K++E+ +
Sbjct: 156 GMEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPF 215
Query: 448 QGKPVQKQARGS-------KTPAVSTPVIPP 519
+G A + ++ +T V PP
Sbjct: 216 KGSSGASVAAAAAAAVAVVESMVTATEVAPP 246
>gi|5921743|sp|Q12873|CHD3_HUMAN Chromodomain helicase-DNA-binding
protein 3 (CHD-3) (Mi-2 autoantigen 240 kDa protein)
(Mi2-alpha)
gi|2645433|gb|AAB87383.1| CHD3 [Homo sapiens]
Length = 1944
Score = 1265 bits (3273), Expect = 0.0
Identities = 656/1243 (52%), Positives = 814/1243 (64%), Gaps = 23/1243 (1%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHG---------- 912
+ DYCE C+Q GE++LCDTCPRAYH VC+D ++ PEG WSC HC + G
Sbjct: 378 HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEE 437
Query: 913 --PEVVKEEPAKQND----EFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWS 1074
E +EE K+ + E+C++CK+ LL CD+C+ S+H +C++PPL ++P E W
Sbjct: 438 EYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGE-WL 496
Query: 1075 CPRCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVK 1254
CPRC + +++KIL WRW E P P + + D + FFVK
Sbjct: 497 CPRCTCPVLKGRVQKILHWRWGEPPVAVPAPQQADGNPD---VPPPRPLQGRSEREFFVK 553
Query: 1255 WKYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEF-----EESVTSRHHSDNDPY 1419
W LSYW CSW E+ LE+ ++ Y RKND D PP E+ S DP+
Sbjct: 554 WVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRKVKDPH 613
Query: 1420 --KLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANY 1593
++ E++Y++GIKPEWM +HRIINH K YLVKW++L YDQ+TWE D+ NI Y
Sbjct: 614 YAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEY 673
Query: 1594 EEAIIKYWQHRESKLNEDIPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQ 1773
EE YW+HRE + ED P +K K +E +G P YE Q
Sbjct: 674 EEHKQSYWRHRELIMGED-PAQPRKYKKKKKELQGDGPPSSPTNDPTVK-------YETQ 725
Query: 1774 PDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCK 1953
P ++T TGG LH YQLEGLNWLR W+ GTD ILADEMGLGKT+Q++ FLYSL KEGH K
Sbjct: 726 PRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTK 785
Query: 1954 GPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKAS 2133
GPFL++APLSTIINWERE + W P FYVVTY G +D+R ++RE+EFSF + A++ G KA
Sbjct: 786 GPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAF 845
Query: 2134 KMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIH 2313
KMK +KFHVLLTSYE I +D+ L SI W LVVDEAHRLKNNQS FF+ LN Y I
Sbjct: 846 KMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKID 905
Query: 2314 YRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHML 2493
+++LLTGTP + ERFN LE F EF +ISKEDQI+KLH+LLGPHML
Sbjct: 906 HKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 965
Query: 2494 RRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMEL 2673
RRLKADV MP+K+ELIVRVELS MQKK+YK ILTRNF+ALN + GG Q+SL+N++M+L
Sbjct: 966 RRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDL 1025
Query: 2674 KKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQM 2853
KKCCNHPYLF A +E+PK +G YEG ALIK+SGK +LLQKMLRKLK+ GHRVLIFSQM
Sbjct: 1026 KKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
Query: 2854 TRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINL 3033
T+MLD++ED +YEGY+YERIDG I G +RQ+AIDR+NAPGAQQF FLLSTRAGGLGINL
Sbjct: 1086 TKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL 1145
Query: 3034 ATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLN 3213
ATADTVII+DSDWNPHNDIQAFSRAHR+GQ +KVMIYRFVT+ SVEE+IT VAK+KM+L
Sbjct: 1146 ATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLT 1205
Query: 3214 HLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXX 3393
HLVVR GLG K G +MSK ELDD+L++GTEELF D EGE E+ + ++
Sbjct: 1206 HLVVRPGLGSKAG-SMSKQELDDILKFGTEELFK---DENEGENKEEDSS----VIHYDN 1257
Query: 3394 XXXXXXXRSNKEETPAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXX 3573
N++ T ED + + NEYLSSFKVA Y
Sbjct: 1258 EAIARLLDRNQDAT---EDTD--VQNMNEYLSSFKVAQY----VVREEDKIEEIEREIIK 1308
Query: 3574 XXXXPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSKQNQTQXXX 3753
DPDYWEKLL+HHYEQ +E + LGKGKRVRKQ+NY N + NQ++
Sbjct: 1309 QEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNY---NDAAQEDQDNQSEYSV 1365
Query: 3754 XXNESYRGSDNGDGLNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAFY 3933
E D +PPL+A+V G +E+LGFN RQRKAF
Sbjct: 1366 GSEEEDEDFDE----RPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVLGFNTRQRKAFL 1421
Query: 3934 GAVMRWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPRE 4113
AVMRWGMPPQD+ +QWLVRDLR K+EK F+AY SLFMRHLCEPGADG +TF DGVPRE
Sbjct: 1422 NAVMRWGMPPQDAFTTQWLVRDLRGKTEKEFKAYVSLFMRHLCEPGADGSETFADGVPRE 1481
Query: 4114 GLNRQHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEIQDEVLAKAANGSAQGSSRSTXXXX 4293
GL+RQ VL RIG++SLV++KVQEFE NG+WSMPE+ + A + S S T
Sbjct: 1482 GLSRQQVLTRIGVMSLVKKKVQEFEHINGRWSMPELMPDPSADSKRSSRASSPTKT---- 1537
Query: 4294 XXXXXXXXXXXDATETVNGATSEPATDAESEQNAPVDEPMDTD 4422
+A+ T + TS+PAT A SE+ + P++ +
Sbjct: 1538 ------SPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
Score = 244 bits (623), Expect = 2e-62
Identities = 127/234 (54%), Positives = 169/234 (71%), Gaps = 2/234 (0%)
Frame = +1
Query: 4468 RAARPSFKFNICDGGFTELHSLWANEEKVA-RNGKEYEIWYRRHDYWLLAGVVVHGYGRF 4644
+ +P F FNI DGGFTELH+LW NEE+ A +GK EIW+RRHDYWLLAG+V+HGY R+
Sbjct: 1667 KTEKPRFMFNIADGGFTELHTLWQNEERAAISSGKLNEIWHRRHDYWLLAGIVLHGYARW 1726
Query: 4645 QANFNDIINDPRFSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHA 4824
Q DI ND +F+++NEPFK + ++K KF+ RRFKL+EQ+LVIEEQLRRAA+
Sbjct: 1727 Q----DIQNDAQFAIINEPFKTEANKGNFLEMKNKFLARRFKLLEQALVIEEQLRRAAYL 1782
Query: 4825 NRHLQPDNVG-PLAQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMK 5001
N +P + L RFA+ E +AES +++KES AGN+ ANAVLHK L QL+E+LSDMK
Sbjct: 1783 NLSQEPAHPAMALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMK 1842
Query: 5002 ADVSRLPSTFTQLATVTERLNMTERQILSRLTTKDEDAIANRSVLPPPGPFVTP 5163
ADV+RLP+T +++ + RL M+ER ILSRL +K + + + PPGP+ TP
Sbjct: 1843 ADVTRLPATLSRIPPIAARLQMSERSILSRLASKGTE--PHPTPAYPPGPYATP 1894
Score = 46.6 bits (109), Expect = 0.007
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +1
Query: 268 GLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKYKEYQDHMAA 447
GL DVE + EE++ ++N K FS ++P I + NP +SKM + K++E+ +
Sbjct: 143 GLEDVEHVFSEEDYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMTILGAKWREFSANNPF 202
Query: 448 QGKPVQKQARGSKTPA 495
+G A + A
Sbjct: 203 KGSAAAVAAAAAAAAA 218
>gi|3298562|gb|AAC39923.1| zinc-finger helicase [Homo sapiens]
Length = 2000
Score = 1265 bits (3273), Expect = 0.0
Identities = 656/1243 (52%), Positives = 814/1243 (64%), Gaps = 23/1243 (1%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHG---------- 912
+ DYCE C+Q GE++LCDTCPRAYH VC+D ++ PEG WSC HC + G
Sbjct: 378 HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEE 437
Query: 913 --PEVVKEEPAKQND----EFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWS 1074
E +EE K+ + E+C++CK+ LL CD+C+ S+H +C++PPL ++P E W
Sbjct: 438 EYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGE-WL 496
Query: 1075 CPRCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVK 1254
CPRC + +++KIL WRW E P P + + D + FFVK
Sbjct: 497 CPRCTCPVLKGRVQKILHWRWGEPPVAVPAPQQADGNPD---VPPPRPLQGRSEREFFVK 553
Query: 1255 WKYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEF-----EESVTSRHHSDNDPY 1419
W LSYW CSW E+ LE+ ++ Y RKND D PP E+ S DP+
Sbjct: 554 WVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRKVKDPH 613
Query: 1420 --KLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANY 1593
++ E++Y++GIKPEWM +HRIINH K YLVKW++L YDQ+TWE D+ NI Y
Sbjct: 614 YAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEY 673
Query: 1594 EEAIIKYWQHRESKLNEDIPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQ 1773
EE YW+HRE + ED P +K K +E +G P YE Q
Sbjct: 674 EEHKQSYWRHRELIMGED-PAQPRKYKKKKKELQGDGPPSSPTNDPTVK-------YETQ 725
Query: 1774 PDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCK 1953
P ++T TGG LH YQLEGLNWLR W+ GTD ILADEMGLGKT+Q++ FLYSL KEGH K
Sbjct: 726 PRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTK 785
Query: 1954 GPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKAS 2133
GPFL++APLSTIINWERE + W P FYVVTY G +D+R ++RE+EFSF + A++ G KA
Sbjct: 786 GPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAF 845
Query: 2134 KMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIH 2313
KMK +KFHVLLTSYE I +D+ L SI W LVVDEAHRLKNNQS FF+ LN Y I
Sbjct: 846 KMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKID 905
Query: 2314 YRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHML 2493
+++LLTGTP + ERFN LE F EF +ISKEDQI+KLH+LLGPHML
Sbjct: 906 HKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 965
Query: 2494 RRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMEL 2673
RRLKADV MP+K+ELIVRVELS MQKK+YK ILTRNF+ALN + GG Q+SL+N++M+L
Sbjct: 966 RRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDL 1025
Query: 2674 KKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQM 2853
KKCCNHPYLF A +E+PK +G YEG ALIK+SGK +LLQKMLRKLK+ GHRVLIFSQM
Sbjct: 1026 KKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
Query: 2854 TRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINL 3033
T+MLD++ED +YEGY+YERIDG I G +RQ+AIDR+NAPGAQQF FLLSTRAGGLGINL
Sbjct: 1086 TKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL 1145
Query: 3034 ATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLN 3213
ATADTVII+DSDWNPHNDIQAFSRAHR+GQ +KVMIYRFVT+ SVEE+IT VAK+KM+L
Sbjct: 1146 ATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLT 1205
Query: 3214 HLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXX 3393
HLVVR GLG K G +MSK ELDD+L++GTEELF D EGE E+ + ++
Sbjct: 1206 HLVVRPGLGSKAG-SMSKQELDDILKFGTEELFK---DENEGENKEEDSS----VIHYDN 1257
Query: 3394 XXXXXXXRSNKEETPAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXX 3573
N++ T ED + + NEYLSSFKVA Y
Sbjct: 1258 EAIARLLDRNQDAT---EDTD--VQNMNEYLSSFKVAQY----VVREEDKIEEIEREIIK 1308
Query: 3574 XXXXPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSKQNQTQXXX 3753
DPDYWEKLL+HHYEQ +E + LGKGKRVRKQ+NY N + NQ++
Sbjct: 1309 QEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNY---NDAAQEDQDNQSEYSV 1365
Query: 3754 XXNESYRGSDNGDGLNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAFY 3933
E D +PPL+A+V G +E+LGFN RQRKAF
Sbjct: 1366 GSEEEDEDFDE----RPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVLGFNTRQRKAFL 1421
Query: 3934 GAVMRWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPRE 4113
AVMRWGMPPQD+ +QWLVRDLR K+EK F+AY SLFMRHLCEPGADG +TF DGVPRE
Sbjct: 1422 NAVMRWGMPPQDAFTTQWLVRDLRGKTEKEFKAYVSLFMRHLCEPGADGSETFADGVPRE 1481
Query: 4114 GLNRQHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEIQDEVLAKAANGSAQGSSRSTXXXX 4293
GL+RQ VL RIG++SLV++KVQEFE NG+WSMPE+ + A + S S T
Sbjct: 1482 GLSRQQVLTRIGVMSLVKKKVQEFEHINGRWSMPELMPDPSADSKRSSRASSPTKT---- 1537
Query: 4294 XXXXXXXXXXXDATETVNGATSEPATDAESEQNAPVDEPMDTD 4422
+A+ T + TS+PAT A SE+ + P++ +
Sbjct: 1538 ------SPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
Score = 243 bits (621), Expect = 3e-62
Identities = 127/234 (54%), Positives = 168/234 (71%), Gaps = 2/234 (0%)
Frame = +1
Query: 4468 RAARPSFKFNICDGGFTELHSLWANEEKVA-RNGKEYEIWYRRHDYWLLAGVVVHGYGRF 4644
+ P F FNI DGGFTELH+LW NEE+ A +GK EIW+RRHDYWLLAG+V+HGY R+
Sbjct: 1701 KTENPRFMFNIADGGFTELHTLWQNEERAAISSGKLNEIWHRRHDYWLLAGIVLHGYARW 1760
Query: 4645 QANFNDIINDPRFSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHA 4824
Q DI ND +F+++NEPFK + ++K KF+ RRFKL+EQ+LVIEEQLRRAA+
Sbjct: 1761 Q----DIQNDAQFAIINEPFKTEANKGNFLEMKNKFLARRFKLLEQALVIEEQLRRAAYL 1816
Query: 4825 NRHLQPDNVG-PLAQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMK 5001
N +P + L RFA+ E +AES +++KES AGN+ ANAVLHK L QL+E+LSDMK
Sbjct: 1817 NLSQEPAHPAMALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMK 1876
Query: 5002 ADVSRLPSTFTQLATVTERLNMTERQILSRLTTKDEDAIANRSVLPPPGPFVTP 5163
ADV+RLP+T +++ + RL M+ER ILSRL +K + + + PPGP+ TP
Sbjct: 1877 ADVTRLPATLSRIPPIAARLQMSERSILSRLASKGTE--PHPTPAYPPGPYATP 1928
Score = 46.6 bits (109), Expect = 0.007
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +1
Query: 268 GLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKYKEYQDHMAA 447
GL DVE + EE++ ++N K FS ++P I + NP +SKM + K++E+ +
Sbjct: 143 GLEDVEHVFSEEDYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMTILGAKWREFSANNPF 202
Query: 448 QGKPVQKQARGSKTPA 495
+G A + A
Sbjct: 203 KGSAAAVAAAAAAAAA 218
>gi|34870936|ref|XP_220602.2| similar to zinc-finger helicase [Rattus
norvegicus]
Length = 2007
Score = 1261 bits (3262), Expect = 0.0
Identities = 655/1244 (52%), Positives = 812/1244 (64%), Gaps = 24/1244 (1%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGP--------- 915
+ DYCE C+Q GE++LCDTCPRAYH VC+D ++ PEG WSC HC + G
Sbjct: 383 HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEE 442
Query: 916 --EVVKEEPAKQND----EFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSC 1077
E EE K+ + E+C++CK+ LL CD+C+ S+H +C++PPL ++P E W C
Sbjct: 443 DYEEEGEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGE-WLC 501
Query: 1078 PRCETVKPEHKIEKILCWRWKEIPY--PEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFV 1251
PRC + +++KIL WRW E P P P +A + + + FFV
Sbjct: 502 PRCTCPVLKGRVQKILHWRWGEPPVAVPAPQQADGDPDAPPPRVLQGRSERE-----FFV 556
Query: 1252 KWKYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEF-----EESVTSRHHSDNDP 1416
KW LSYW CSW E+ LE+ ++ Y RKND D PP E+ S DP
Sbjct: 557 KWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRKVKDP 616
Query: 1417 Y--KLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIAN 1590
+ ++ E++Y++GIKPEWM +HRIINH K YLVKWK+L YDQ+TWE D+ NI
Sbjct: 617 HYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEEDEMNIPE 676
Query: 1591 YEEAIIKYWQHRESKLNEDIPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEV 1770
Y++ YW+HRE + ED P +K K +E +G P YE
Sbjct: 677 YDDHKQSYWRHRELIMGED-PAQPRKYKKKKKEIQGDGPPSSPTNDPTVK-------YET 728
Query: 1771 QPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHC 1950
QP ++T TGG LH YQLEGLNWLR W+ GTD ILADEMGLGKT+Q++ FLYSL KEGH
Sbjct: 729 QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 788
Query: 1951 KGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKA 2130
KGPFL++APLSTIINWERE + W P FYVVTY G +D+R ++RE+EFSF + A++ G KA
Sbjct: 789 KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKA 848
Query: 2131 SKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTI 2310
KMK +KFHVLLTSYE I +D+ L SI W LVVDEAHRLKNNQS FF+ LN Y I
Sbjct: 849 FKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKI 908
Query: 2311 HYRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHM 2490
+++LLTGTP + ERFN LE F EF +ISKEDQI+KLH+LLGPHM
Sbjct: 909 DHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHM 968
Query: 2491 LRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLME 2670
LRRLKADV MP+K+ELIVRVELS MQKK+YK ILTRNF+ALN + GG Q+SL+N++M+
Sbjct: 969 LRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMD 1028
Query: 2671 LKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQ 2850
LKKCCNHPYLF A +E+PK +G YEG ALIK+SGK +LLQKMLRKLK+ GHRVLIFSQ
Sbjct: 1029 LKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQ 1088
Query: 2851 MTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGIN 3030
MT+MLD++ED +YEGY+YERIDG I G +RQ+AIDR+NAPGAQQF FLLSTRAGGLGIN
Sbjct: 1089 MTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGIN 1148
Query: 3031 LATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLL 3210
LATADTVII+DSDWNPHNDIQAFSRAHR+GQ +KVMIYRFVT+ SVEE+IT VAK+KM+L
Sbjct: 1149 LATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1208
Query: 3211 NHLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXX 3390
HLVVR GLG K G +MSK ELDD+L++GTEELF D EGE E+ + ++
Sbjct: 1209 THLVVRPGLGSKAG-SMSKQELDDILKFGTEELFK---DENEGENKEEDSS----VIHYD 1260
Query: 3391 XXXXXXXXRSNKEETPAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXX 3570
N++ T + + NEYLSSFKVA Y
Sbjct: 1261 NEAIARLLDRNQDAT-----DDTDVQNMNEYLSSFKVAQY----VVREEDKIEEIEREII 1311
Query: 3571 XXXXXPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSKQNQTQXX 3750
DPDYWEKLL+HHYEQ +E + LGKGKRVRKQ+NY N + NQ++
Sbjct: 1312 KQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNY---NDAAQEDQDNQSEYS 1368
Query: 3751 XXXNESYRGSDNGDGLNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAF 3930
E D +PPL+A+V G +E+LGFN RQRKAF
Sbjct: 1369 VGSEEEDEDFDE----RPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVLGFNTRQRKAF 1424
Query: 3931 YGAVMRWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPR 4110
AVMRWGMPPQD+ +QWLVRDLR K+EK F+AY SLFMRHLCEPGADG +TF DGVPR
Sbjct: 1425 LNAVMRWGMPPQDAFTTQWLVRDLRGKTEKEFKAYVSLFMRHLCEPGADGSETFADGVPR 1484
Query: 4111 EGLNRQHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEIQDEVLAKAANGSAQGSSRSTXXX 4290
EGL+RQ VL RIG++SLV++KVQEFE NG+WSMPE+ + A + S S T
Sbjct: 1485 EGLSRQQVLTRIGVMSLVKKKVQEFEHINGRWSMPELMPDPSADSKRSSRASSPTKT--- 1541
Query: 4291 XXXXXXXXXXXXDATETVNGATSEPATDAESEQNAPVDEPMDTD 4422
+A+ T + TS+PAT A SE+ V ++ D
Sbjct: 1542 -------SPTTPEASTTNSPCTSKPATPAPSEKGDGVRTLLEKD 1578
Score = 244 bits (624), Expect = 1e-62
Identities = 134/274 (48%), Positives = 176/274 (63%), Gaps = 2/274 (0%)
Frame = +1
Query: 4348 GATSEPATDAESEQNAPVDEPMDTDXXXXXXXXXXXXXXXRAARPSFKFNICDGGFTELH 4527
G + D E P DEP + +P F FNI DGGFTELH
Sbjct: 1677 GKREDVKADRELRLGPPRDEPRPNGRREE-----------KVEKPRFMFNIADGGFTELH 1725
Query: 4528 SLWANEEKVA-RNGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFNDIINDPRFSVLNEPF 4704
+LW NEE+ A +GK EIW+RRHDYWLLAG+V+HGY R+Q DI ND +F+++NEPF
Sbjct: 1726 TLWQNEERAAISSGKLNEIWHRRHDYWLLAGIVLHGYARWQ----DIQNDAQFAIINEPF 1781
Query: 4705 KEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQPDNVG-PLAQRFADL 4881
K + ++K KF+ RRFKL+EQ+LVIEEQLRRAA+ N +P + L RFA+
Sbjct: 1782 KTEANKGNFLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNLSQEPAHPAMALHARFAEA 1841
Query: 4882 ENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMKADVSRLPSTFTQLATVTERL 5061
E +AES +++KES AGN+ ANAVLHK L QL+E+LSDMKADV+RLP+T +++ + RL
Sbjct: 1842 ECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRIPPIAARL 1901
Query: 5062 NMTERQILSRLTTKDEDAIANRSVLPPPGPFVTP 5163
M+ER ILSRL +K + + PPGP+ TP
Sbjct: 1902 QMSERSILSRLASKGTEPHPTPAF--PPGPYATP 1933
Score = 46.6 bits (109), Expect = 0.007
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +1
Query: 268 GLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKYKEYQDHMAA 447
GL DVE + EE++ ++N K FS ++P I + NP +SKM + K++E+ +
Sbjct: 157 GLEDVEHVFSEEDYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMTILGAKWREFSANNPF 216
Query: 448 QGKPVQKQARGSKTPA 495
+G A + A
Sbjct: 217 KGSAAAVAAAAAAAAA 232
>gi|24308089|ref|NP_056372.1| chromodomain helicase DNA binding
protein 5 [Homo sapiens]
gi|19773960|gb|AAL98962.1| chromodomain helicase DNA binding protein
5 [Homo sapiens]
Length = 1954
Score = 1260 bits (3261), Expect = 0.0
Identities = 656/1230 (53%), Positives = 801/1230 (64%), Gaps = 57/1230 (4%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVKEEPAK 942
+ DYCE C+Q GE++LCDTCPRAYH VC+D +E+ PEG WSC HC + G ++ EP
Sbjct: 342 HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEG---IQWEPKD 398
Query: 943 QNDE---------------FCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSC 1077
+DE FC++CK+ LL CD+C S+H +C++PPL E+P E W C
Sbjct: 399 DDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGE-WLC 457
Query: 1078 PRCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVKW 1257
PRC + K+++IL WRW E P P G + L FFVKW
Sbjct: 458 PRCTCPPLKGKVQRILHWRWTEPP--APFMVGLPGPDVEPSLPPPKPLEGIPEREFFVKW 515
Query: 1258 KYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFE-----ESVTSRHHSDNDPY- 1419
LSYW CSWV E+ LE++ ++ Y RKND D PP F+ E S + DP
Sbjct: 516 AGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLY 575
Query: 1420 -KLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYE 1596
K+ ERFY+YGIKPEWM IHRI+NH K YL+KWK+L YDQ TWE DD +I Y+
Sbjct: 576 AKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYD 635
Query: 1597 EAIIKYWQHRESKLNED--IPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEV 1770
YW HRE L ED +PK + K K R+ K P ++
Sbjct: 636 NLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQEKPPDTPIVDPTVK-------FDK 688
Query: 1771 QPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHC 1950
QP Y+ TGG LHPYQLEGLNWLR W+ GTD ILADEMGLGKTVQ++ FLYSL KEGH
Sbjct: 689 QPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHS 748
Query: 1951 KGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKA 2130
KGP+L++APLSTIINWERE E W PDFYVVTY G +++R V+RE+EFSF + A+RSG K
Sbjct: 749 KGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKV 808
Query: 2131 SKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTI 2310
+MK +KFHVLLTSYE I +D+ IL SIEW LVVDEAHRLKNNQS FF+ LN Y I
Sbjct: 809 FRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI 868
Query: 2311 HYRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHM 2490
Y++LLTGTP + ERFN LE F EF +ISKEDQI+KLH+LLGPHM
Sbjct: 869 DYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHM 928
Query: 2491 LRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLME 2670
LRRLKADV MP+K+ELIVRVELS MQKK+YK ILTRNF+ALN K GG Q+SL+N++M+
Sbjct: 929 LRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMD 988
Query: 2671 LKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQ 2850
LKKCCNHPYLF A +EAP NG Y+G++L+K+SGK +LLQKML+KL+D GHRVLIFSQ
Sbjct: 989 LKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQ 1048
Query: 2851 MTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGIN 3030
MT+MLD++ED EYEGY+YERIDG I G +RQ+AIDR+NAPGAQQF FLLSTRAGGLGIN
Sbjct: 1049 MTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGIN 1108
Query: 3031 LATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLL 3210
LATADTVIIYDSDWNPHNDIQAFSRAHR+GQ KVMIYRFVT+ SVEE+IT VAK+KM+L
Sbjct: 1109 LATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1168
Query: 3211 NHLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXX 3390
HLVVR GLG K G +M+K ELDD+L++GTEELF +D++ +G ++ ++
Sbjct: 1169 THLVVRPGLGSKSG-SMTKQELDDILKFGTEELFKDDVEGMMSQG-QRPVTPIPDVQSSK 1226
Query: 3391 XXXXXXXXRSNKEETPAG-------------------------EDGEEKAEWQ--NEYLS 3489
+ TP G +D + E Q NEYLS
Sbjct: 1227 GGNLAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLS 1286
Query: 3490 SFKVASYQXXXXXXXXXXXXXXXXXXXXXXXXPDPDYWEKLLKHHYEQDREIELQKLGKG 3669
SFKVA Y DPDYWEKLL+HHYEQ +E + LGKG
Sbjct: 1287 SFKVAQY----VVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKG 1342
Query: 3670 KRVRKQINYASENMGTDWSKQNQTQXXXXXNESYRGSDNGD------GLNSXXXXXXXXX 3831
KR+RKQ+NY N + ++ Q + +E GS++ D
Sbjct: 1343 KRIRKQVNY---NDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQ 1399
Query: 3832 XXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAFYGAVMRWGMPPQDSHQSQWLVRDLRNK 4011
+PPL+A+V G +E+LGFN RQRKAF A+MRWGMPPQD+ S WLVRDLR K
Sbjct: 1400 LKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGK 1459
Query: 4012 SEKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNRQHVLGRIGLLSLVRRKVQEFEQ 4191
SEK FRAY SLFMRHLCEPGADG +TF DGVPREGL+RQHVL RIG++SLVR+KVQEFE
Sbjct: 1460 SEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEH 1519
Query: 4192 YNGQWSMPEIQDEVLAKAANGSAQGSSRST 4281
NG++S P++ E +G S +T
Sbjct: 1520 VNGKYSTPDLIPEGPEGKKSGEVISSDPNT 1549
Score = 238 bits (608), Expect = 9e-61
Identities = 131/257 (50%), Positives = 170/257 (65%), Gaps = 2/257 (0%)
Frame = +1
Query: 4348 GATSEPATDAESEQNAPVDEPMDTDXXXXXXXXXXXXXXXRAARPSFKFNICDGGFTELH 4527
G +SE D + A EP++T + + F FNI DGGFTELH
Sbjct: 1660 GDSSELRPD---DTKAEEKEPIETQQNGDKEEDDEGKKEDKKGKFKFMFNIADGGFTELH 1716
Query: 4528 SLWANEEKVA-RNGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFNDIINDPRFSVLNEPF 4704
+LW NEE+ A +GK Y+IW+RRHDYWLLAG+V HGY R+Q DI NDPR+ +LNEPF
Sbjct: 1717 TLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQ----DIQNDPRYMILNEPF 1772
Query: 4705 KEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQPDNVG-PLAQRFADL 4881
K + ++K KF+ RRFKL+EQ+LVIEEQLRRAA+ N P++ L R A++
Sbjct: 1773 KSEVHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEV 1832
Query: 4882 ENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMKADVSRLPSTFTQLATVTERL 5061
E +AES +++KES AGN+ ANAVLHK L QL+E+LSDMKADV+RLPS +++ V RL
Sbjct: 1833 ECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARL 1892
Query: 5062 NMTERQILSRLTTKDED 5112
M+ER ILSRLT + D
Sbjct: 1893 QMSERSILSRLTNRAGD 1909
Score = 51.6 bits (122), Expect = 2e-04
Identities = 25/93 (26%), Positives = 47/93 (49%)
Frame = +1
Query: 241 TSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKY 420
+S ++ A GL DV++ + EE++ ++N K FS ++P I + NP +SKM + K+
Sbjct: 133 SSGQLMAEWGLDDVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKW 192
Query: 421 KEYQDHMAAQGKPVQKQARGSKTPAVSTPVIPP 519
+E+ + +G A + + PP
Sbjct: 193 REFSANNPFKGSSAAAAAAAVAAAVETVTISPP 225
>gi|38079062|ref|XP_196334.3| similar to chromodomain helicase DNA
binding protein 5 [Mus musculus]
Length = 2056
Score = 1247 bits (3227), Expect = 0.0
Identities = 649/1216 (53%), Positives = 793/1216 (64%), Gaps = 60/1216 (4%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHG---------- 912
+ DYCE C+Q GE++LCDTCPRAYH VC+D +E+ PEG WSC HC + G
Sbjct: 344 HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDE 403
Query: 913 --PEVVKEEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRC 1086
E EE + EFC++CK+ LL CD+C S+H +C++PPL E+P E W CPRC
Sbjct: 404 EEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGE-WLCPRC 462
Query: 1087 ETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVKWKYL 1266
+ K+++IL WRW E P P G + + FFVKW L
Sbjct: 463 TCPPLKGKVQRILHWRWTEPP--APFVVGLPGPEVEPGMPPPRPLEGIPEREFFVKWAGL 520
Query: 1267 SYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFE-----ESVTSRHHSDNDPY--KL 1425
SYW CSWV E+ LE++ ++ Y RKND D PP F+ E S + DP K+
Sbjct: 521 SYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKM 580
Query: 1426 RERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAI 1605
ERFY+YGIKPEWM +HRI+NH K YL+KWK+L YDQ TWE D+ +I Y+
Sbjct: 581 EERFYRYGIKPEWMMVHRILNHSFDKKGDIHYLIKWKDLPYDQCTWEIDEIDIPYYDNLK 640
Query: 1606 IKYWQHRESKLNED--IPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQPD 1779
YW HRE L ED +PK + K K ++ K P ++ QP
Sbjct: 641 QAYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVK-------FDKQPW 693
Query: 1780 YVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGP 1959
Y+ TGG LHPYQLEGLNWLR W+ GTD ILADEMGLGKTVQ++ FLYSL KEGH KGP
Sbjct: 694 YIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGP 753
Query: 1960 FLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKM 2139
+L++APLSTIINWERE E W PDFYVVTY G +++R V+RE+EFSF + A+R G K +M
Sbjct: 754 YLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRGGKKVFRM 813
Query: 2140 KTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYR 2319
K +KFHVLLTSYE I +D+ IL SIEW LVVDEAHRLKNNQS FF+ LN Y I Y+
Sbjct: 814 KKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYK 873
Query: 2320 VLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRR 2499
+LLTGTP + ERFN LE F EF +ISKEDQI+KLH+LLGPHMLRR
Sbjct: 874 LLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRR 933
Query: 2500 LKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKK 2679
LKADV MP+K+ELIVRVELS MQKK+YK ILTRNF+ALN K GG Q+SL+N++M+LKK
Sbjct: 934 LKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKK 993
Query: 2680 CCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTR 2859
CCNHPYLF A +EAP NG Y+G++L+K+SGK +LLQKML+KL+D GHRVLIFSQMT+
Sbjct: 994 CCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTK 1053
Query: 2860 MLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYN------APGAQQFIFLLSTRAGGL 3021
MLD++ED EYEGY+YERIDG I G +RQ+AIDR+N APGAQQF FLLSTRAGGL
Sbjct: 1054 MLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNGTHLSRAPGAQQFCFLLSTRAGGL 1113
Query: 3022 GINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKK 3201
GINLATADTVIIYDSDWNPHNDIQAFSRAHR+GQ KVMIYRFVT+ SVEE+IT VAK+K
Sbjct: 1114 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRK 1173
Query: 3202 MLLNHLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIV 3381
M+L HLVVR GLG K G +M+K ELDD+L++GTEELF +D++ +G ++ +I
Sbjct: 1174 MMLTHLVVRPGLGSKSG-SMTKQELDDILKFGTEELFKDDVEGMMSQG-QRPTTPIPDIQ 1231
Query: 3382 WXXXXXXXXXXRSNKEETPAG-------------------------EDGEEKAEWQ--NE 3480
+ TP G +D + E Q NE
Sbjct: 1232 STKGGSLTAGAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNE 1291
Query: 3481 YLSSFKVASYQXXXXXXXXXXXXXXXXXXXXXXXXPDPDYWEKLLKHHYEQDREIELQKL 3660
YLSSFKVA Y DPDYWEKLL+HHYEQ +E + L
Sbjct: 1292 YLSSFKVAQY----VVREEDGVEEVEREVIKQEENVDPDYWEKLLRHHYEQQQEDLARNL 1347
Query: 3661 GKGKRVRKQINYASENMGTDWSKQNQTQXXXXXNESYRGSDNGD------GLNSXXXXXX 3822
GKGKR+RKQ+NY N + ++ Q + +E GS++ D
Sbjct: 1348 GKGKRIRKQVNY---NDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQS 1404
Query: 3823 XXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAFYGAVMRWGMPPQDSHQSQWLVRDL 4002
+PPL+A+V G +E+LGFN RQRKAF A+MRWGMPPQD+ S WLVRDL
Sbjct: 1405 RRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDL 1464
Query: 4003 RNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNRQHVLGRIGLLSLVRRKVQE 4182
R KSEK FRAY SLFMRHLCEPGADG +TF DGVPREGL+RQHVL RIG++SLVR+KVQE
Sbjct: 1465 RGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQE 1524
Query: 4183 FEQYNGQWSMPEIQDE 4230
FE NG++S P++ E
Sbjct: 1525 FEHVNGKYSTPDLVPE 1540
Score = 212 bits (540), Expect = 7e-53
Identities = 124/253 (49%), Positives = 156/253 (61%), Gaps = 44/253 (17%)
Frame = +1
Query: 4486 FKFNICDGGFTELHSLWANEEKVA-RNGKEYEIWYRRHDYWLLAGVVV--------HGYG 4638
F FNI DGGFTELH+LW NEE+ A +GK YEIW+RRHDYWLLAG+V HGY
Sbjct: 1707 FMFNIADGGFTELHTLWQNEERAAVSSGKIYEIWHRRHDYWLLAGIVTFTLNSTHRHGYA 1766
Query: 4639 RFQANFNDIINDPRFSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAA 4818
R+Q DI NDPR+ +LNEPFK + ++K KF+ RRFKL+EQ+LVIEEQLRRAA
Sbjct: 1767 RWQ----DIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAA 1822
Query: 4819 HANRHLQPDNVG-PLAQRFADLENIAESQANIAKESSAGNRNANAVLHK----------- 4962
+ N P++ L R A++E +AES +++KES AGN+ ANAVLHK
Sbjct: 1823 YLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKDLHRDTNKEGQ 1882
Query: 4963 -----------------------TLVQLDEILSDMKADVSRLPSTFTQLATVTERLNMTE 5073
L QL+E+LSDMKADV+RLPS +++ V RL M+E
Sbjct: 1883 AAVGSTEMWEIGGSPMLTVLPCAVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSE 1942
Query: 5074 RQILSRLTTKDED 5112
R ILSRLT + D
Sbjct: 1943 RSILSRLTNRAGD 1955
Score = 50.8 bits (120), Expect = 4e-04
Identities = 24/93 (25%), Positives = 47/93 (49%)
Frame = +1
Query: 241 TSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKY 420
+S ++ A GL DV++ + E+++ ++N K FS ++P I + NP +SKM + K+
Sbjct: 136 SSGQLMAEWGLDDVDYLFSEDDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKW 195
Query: 421 KEYQDHMAAQGKPVQKQARGSKTPAVSTPVIPP 519
+E+ + +G A + + PP
Sbjct: 196 REFSANNPFKGSSAAAAAAAVAAAVETVTIAPP 228
>gi|31240219|ref|XP_320523.1| ENSANGP00000008665 [Anopheles gambiae]
gi|21288371|gb|EAA00692.1| ENSANGP00000008665 [Anopheles gambiae str.
PEST]
Length = 2010
Score = 1208 bits (3126), Expect = 0.0
Identities = 633/1257 (50%), Positives = 803/1257 (63%), Gaps = 46/1257 (3%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVKEEPAK 942
+ DYCE C+Q GE++LCDTCP+AYH VC+D +E+ PEG WSC C GP +E
Sbjct: 418 HQDYCEVCQQGGEIILCDTCPKAYHLVCLDPELEDTPEGKWSCPTCEAEGPA---DEDDD 474
Query: 943 QNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVKPEHKIEKI 1122
++ EFC++CK+ LL CD+C ++H +C++PPL ++P E W CPRC K++KI
Sbjct: 475 EHQEFCRVCKDGGELLCCDNCPSAYHTFCLNPPLDDIPDGE-WRCPRCSCPPLADKVQKI 533
Query: 1123 LCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVKWKYLSYWQCSWVSEML 1302
L WRW + +P+ + ++S A +FVKW SYW C W++E+
Sbjct: 534 LTWRWTD----KPINPDEPSTSKGA---AAAAGGSTRRREYFVKWHEKSYWHCDWITELQ 586
Query: 1303 LEVHFRMLILLYWRKNDSDAPPEFEESVTS---------RHHSDN---DPYKLRERFYQY 1446
L+VH ++ Y RKND + PP+ EE++ R N + +L E++Y+Y
Sbjct: 587 LDVHHPLMFRYYTRKNDMEEPPKLEEALDEEDNRYKRIQRMRETNCQLNETELEEKYYRY 646
Query: 1447 GIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYWQHR 1626
G+KPEW+ +HR+INH++ + YLVKW+ELSYDQATWE ++ +IA + AI +Y+
Sbjct: 647 GVKPEWLMVHRVINHRTMRDGRTLYLVKWRELSYDQATWEDEEDDIAGLKMAI-EYYLDL 705
Query: 1627 ESKLNEDI-----------PKNVQKMIAKHREAKGLPPXXXXXXXX---XXXXXXXXXXY 1764
+ ++DI KN +K + RE + +
Sbjct: 706 RANCSQDIGGSGSGGSGSSKKNKKKGRRRLRELEEEERTAGVKRYTPPPEKPTTDLKRKF 765
Query: 1765 EVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEG 1944
EVQP Y+ ETG +LHPYQLEG+NWLR+ W+NGTD ILADEMGLGKT+Q+ TFLYSL KEG
Sbjct: 766 EVQPPYLDETGMRLHPYQLEGINWLRYSWANGTDTILADEMGLGKTIQTATFLYSLYKEG 825
Query: 1945 HCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGP 2124
HC+GPFL+A PLSTIINWERE E W PDFY +TYVG +++R V+RE+E SF EGAVR G
Sbjct: 826 HCRGPFLVAVPLSTIINWEREFETWAPDFYCITYVGDKESRAVIRENELSFEEGAVRGG- 884
Query: 2125 KASKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEY 2304
KAS+++ + ++KF+VLLTSYE I++D L SI+W LVVDEAHRLK+NQS FFK LN Y
Sbjct: 885 KASRIRAS-SIKFNVLLTSYELISIDAACLGSIDWSVLVVDEAHRLKSNQSKFFKVLNAY 943
Query: 2305 TIHYRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGP 2484
I Y++LLTGTP +K +FN+L F EF +ISKE+Q+++LH +LGP
Sbjct: 944 NIAYKLLLTGTPLQNNLEELFHLLNFLNKSKFNELAEFQNEFADISKEEQVKRLHEMLGP 1003
Query: 2485 HMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVL 2664
HMLRRLKADVL MP+KSE IVRVELS +QKK+YK ILTRN++ALN K GG SL+N++
Sbjct: 1004 HMLRRLKADVLKNMPTKSEFIVRVELSPLQKKYYKYILTRNYEALNPKGGGGACSLINIM 1063
Query: 2665 MELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIF 2844
M+LKKCCNHPYLF A EA G YE +L K +GK VLL+KMLR LK GHRVLIF
Sbjct: 1064 MDLKKCCNHPYLFAAAAEEAQLGPGGNYELQSLTKAAGKLVLLEKMLRLLKSQGHRVLIF 1123
Query: 2845 SQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLG 3024
SQMT+MLDI+ED E GY+YERIDG I G +RQ+AIDR+NAPGA QF FLLSTRAGGLG
Sbjct: 1124 SQMTKMLDILEDFLEGLGYKYERIDGGITGSIRQEAIDRFNAPGAPQFCFLLSTRAGGLG 1183
Query: 3025 INLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKM 3204
INLATADTVIIYDSDWNPHNDIQAFSRAHR+GQ +KVMIYRFVT+ SVEE++T VAK+KM
Sbjct: 1184 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKM 1243
Query: 3205 LLNHLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVW 3384
+L HLVVR G+GGK G +K ELDD+LR+GTEELF ED G + I +
Sbjct: 1244 MLTHLVVRPGMGGK-GTNFTKQELDDILRFGTEELFKED------------GKDEEAIHY 1290
Query: 3385 XXXXXXXXXXRSNKEETPAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXX 3564
RSNK EEK W NEYLSSFKVASY
Sbjct: 1291 DDKAVAELLDRSNK-------GVEEKENWANEYLSSFKVASYSTKEDVEEEAETEVIKQE 1343
Query: 3565 XXXXXXXPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENM--------GTD 3720
DP YW KLL+HHYEQ +E + LGKGKRVRKQ+NY + +
Sbjct: 1344 AENS----DPAYWVKLLRHHYEQHQEDLSRTLGKGKRVRKQVNYTDGGVIQADPVKEDST 1399
Query: 3721 W----SKQNQTQXXXXXNESYRGSDNGDGLNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQ 3888
W S N + +E D L +PPL+A+V G
Sbjct: 1400 WQENVSDYNNSDYSGASDEDRDEDDEESELGRRSRRRIERKEAERDNRPLPPLLARVGGN 1459
Query: 3889 VEILGFNPRQRKAFYGAVMRWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEP 4068
+E+LGFN RQRK+F A+MR+GMPPQD+ SQWLVRDLR KSE++F+AY SLFMRHLCEP
Sbjct: 1460 IEVLGFNARQRKSFLNAIMRYGMPPQDAFHSQWLVRDLRGKSERIFKAYVSLFMRHLCEP 1519
Query: 4069 GADGHDTFNDGVPREGLNRQHVLGRIGLLSLVRRKVQEFEQYNGQWSMPE--------IQ 4224
GAD +TF DGVPREGL+RQHVL RIG++SL+R+KVQEFE NG +SMPE ++
Sbjct: 1520 GADNAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHINGYYSMPELIKRPCEPVK 1579
Query: 4225 DEVLAKAANGSAQGSSRSTXXXXXXXXXXXXXXXDATETVNGATSEPATDAESEQNA 4395
V A AA G+A G+S T A A++ + D E EQ +
Sbjct: 1580 IAVAAPAAVGAAPGASGETSKSATTSTSATPATSAAPSPAPNASA--SGDKEEEQQS 1634
Score = 244 bits (623), Expect = 2e-62
Identities = 134/248 (54%), Positives = 166/248 (66%), Gaps = 1/248 (0%)
Frame = +1
Query: 4483 SFKFNICDGGFTELHSLWANEEKVARNGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFND 4662
+F FNI DGGFTELH+LW NEEK A G+EYEIW+RRHDYWLLAG+V HGYGR+Q D
Sbjct: 1759 AFMFNIADGGFTELHTLWINEEKAAVPGREYEIWHRRHDYWLLAGIVTHGYGRWQ----D 1814
Query: 4663 IINDPRFSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQP 4842
I ND RF+++NEPFK + +IK KF+ RRFKL+EQSLVIEEQLRRAA N P
Sbjct: 1815 IQNDIRFAIINEPFKMDVGKGNFLEIKNKFLARRFKLLEQSLVIEEQLRRAALLNLAQDP 1874
Query: 4843 DNVG-PLAQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMKADVSRL 5019
+ L RFA++E +AES +++KES AGN+ ANAVLHK L QL+E+LSDMK+DVSRL
Sbjct: 1875 AHPAMALNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSRL 1934
Query: 5020 PSTFTQLATVTERLNMTERQILSRLTTKDEDAIANRSVLPPPGPFVTPILRQQMDGIQPK 5199
P+T ++ V +RL M+ER ILSRL N PP F + G
Sbjct: 1935 PATLARIPPVAQRLQMSERSILSRLAATGNTVQQN----PPMSQFPPGYQGTTLPGFAAA 1990
Query: 5200 FAALYSKF 5223
AA ++ F
Sbjct: 1991 AAANFATF 1998
Score = 51.6 bits (122), Expect = 2e-04
Identities = 20/63 (31%), Positives = 40/63 (62%)
Frame = +1
Query: 241 TSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKY 420
T +EVC++ LTDV+ +Y EE+F+ + K F + ++P + + NP ++K+ + K+
Sbjct: 145 TIQEVCSSFDLTDVKIEYTEEDFENLVTFKMFQTHVRPILTKENPRVPMAKLMMLVAAKW 204
Query: 421 KEY 429
+E+
Sbjct: 205 REF 207
>gi|47227437|emb|CAG04585.1| unnamed protein product [Tetraodon
nigroviridis]
Length = 2248
Score = 1196 bits (3094), Expect = 0.0
Identities = 644/1310 (49%), Positives = 811/1310 (61%), Gaps = 101/1310 (7%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHC-------------- 900
+ DYCE C+Q GE++LCDTCPRAYH VC++ +++ PEG WSC HC
Sbjct: 273 HQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDKAPEGKWSCPHCEKEGIQWEAKDEEF 332
Query: 901 --------------IEHGPEVVKEEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDP 1038
+ G + EE + EFC++CK+ LL CD+C S+H +C++P
Sbjct: 333 EDFEEDSEDRVISEVSLGVPMGAEEEDDDHMEFCRVCKDGGELLCCDTCTSSYHIHCLNP 392
Query: 1039 PLTEVPKEETWSCPRCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXX 1218
PL E+P E W CPRC + ++++IL WRW E P P P+ +A D
Sbjct: 393 PLPEIPNGE-WLCPRCTCPPIKGRVQRILHWRWGEPPDPIPVPPAPDAPPD---APPPPP 448
Query: 1219 XXXXXXXXFFVKWKYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFEES----- 1383
FFVK SYW C+W++E+ LE+ ++ Y RK D D PP +
Sbjct: 449 MKGRAEREFFVKLVAQSYWHCTWITELQLEIFHSVMYRNYQRKTDMDEPPSLDYGSGGED 508
Query: 1384 ----VTSRHHSDNDPY--KLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELS 1545
+ S DP L +++Y+YGIKPEWM IHRIINH K YLVKWK+L+
Sbjct: 509 ENALLKSEKRRAKDPQYAVLEDKYYRYGIKPEWMMIHRIINHSVDKKGICHYLVKWKDLT 568
Query: 1546 YDQATWERDDSNIANYEEAIIKYWQHRESKLNEDIPKNVQKMIAKHREAKGLPPXXXXXX 1725
YDQ TWERDD ++ ++ YW+HR++ + ED P ++M +K +E + P
Sbjct: 569 YDQCTWERDDMDVPDFAIYKKNYWKHRDAIMKED-PDKPKRMRSKSQEGEEESP------ 621
Query: 1726 XXXXXXXXXXXXYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTV 1905
YE QPD+VT TGG LH YQLEGLNWLR W+ GTD ILADEMGLGKT+
Sbjct: 622 --ASPVTDPTIKYEEQPDFVTATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTI 679
Query: 1906 QSLTFLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREH 2085
Q++ FLYSL KEGH KGPFL++APLSTIINWERE E W PDFYVVTY G +D+R ++RE+
Sbjct: 680 QTIVFLYSLFKEGHTKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAIIREN 739
Query: 2086 EFSFVEGAVRSGPKASKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLK 2265
EFSF + AV++G KA K++ +KFHVLLTSYE + +D+T L SIEW LVVDEAHRLK
Sbjct: 740 EFSFDDTAVKAGKKAFKLRREAPIKFHVLLTSYELVTIDQTALKSIEWACLVVDEAHRLK 799
Query: 2266 NNQSLFFKNLNEYTIHYRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISK 2445
NNQS FF+ LN+Y I +++LLTGTP + RFN LE F EF +ISK
Sbjct: 800 NNQSKFFRRLNDYKIDHKLLLTGTPLQNNLEELFHLLNFLTPNRFNNLEGFLEEFADISK 859
Query: 2446 EDQIEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQK------KWYKNILTRN 2607
EDQI+KLH+LLGPHMLRRLKADV MPSK+ELIVRVELS MQK K+YK+ILT+N
Sbjct: 860 EDQIKKLHDLLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKYDTLETKYYKHILTKN 919
Query: 2608 FDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFV 2787
F+ALN K GG Q+SL+N++M+LKKCCNHPYLF A +EA K G YEG+AL K SGK +
Sbjct: 920 FEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPAASMEAQKTPTGAYEGSALTKASGKLM 979
Query: 2788 LLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYN 2967
LLQKMLRKLK+ GHRVL+FSQMT+MLD++ED ++EGY+YERIDG I G +RQ+AIDR+N
Sbjct: 980 LLQKMLRKLKEQGHRVLVFSQMTKMLDLLEDFLDHEGYKYERIDGGITGALRQEAIDRFN 1039
Query: 2968 APGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDI------------------- 3090
APGA QF FLLSTRAGGLGINLATADTVII+DSDWNPHNDI
Sbjct: 1040 APGACQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQVAVGSAGRGAARCGADLN 1099
Query: 3091 -------QAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLGGKE 3249
QAFSRAHR+GQ +KVMIYRFVT+ SVEE+IT VAK+KM+L HLVVR GLG K
Sbjct: 1100 RRPSLPAQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKA 1159
Query: 3250 GKTMSKTELDDVLRWGTEELFS------------------EDLDAAEGEGSEKKGA---- 3363
G +MSK ELDD+L++GTEELF E ++A++ + S A
Sbjct: 1160 G-SMSKQELDDILKFGTEELFKDEGEEDTLDSSSPLQNRLEPMNASKVDPSPNLPAGMKN 1218
Query: 3364 AAQEIVWXXXXXXXXXXRSNKEETPAGEDGEEKAEWQ--NEYLSSFKVASYQXXXXXXXX 3537
++++ V + + +D + A+ Q NEYLSSFKVA Y
Sbjct: 1219 SSKDKVEDEGSVIHYDSTAIERLLDRSQDDTDDADVQNMNEYLSSFKVAQYMVREEDKTE 1278
Query: 3538 XXXXXXXXXXXXXXXXPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINY---ASEN 3708
DPDYWEKLL+HHYEQ +E KLGKGKR RK +NY A E+
Sbjct: 1279 EIEREIIKQEENV----DPDYWEKLLRHHYEQQQEDLASKLGKGKRNRKPVNYNDAAQED 1334
Query: 3709 MGTDWS---KQNQTQXXXXXNESYRGSDNGDGLNSXXXXXXXXXXXXXXXXXMPPLMAKV 3879
+W NQ++ E D+ +PPL+A+V
Sbjct: 1335 Q--EWHADISDNQSEYSVGSEEEDEDFDD----RPEGRRQSRRQLRNDKDKPLPPLLARV 1388
Query: 3880 NGQVEILGFNPRQRKAFYGAVMRWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHL 4059
G +E+LGFN RQRKAF AVMRWGMP QD+ SQWLVRDLR K+EK F+AY SLFMRHL
Sbjct: 1389 GGNLEVLGFNTRQRKAFLNAVMRWGMPSQDTFASQWLVRDLRGKTEKEFKAYVSLFMRHL 1448
Query: 4060 CEPGADGHDTFNDGVPREGLNRQHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEIQDEVLA 4239
CEP ADG +TF DGVPREGL RQ VL RIG++SLV++K+QEFE NG+WS+PE++ EV
Sbjct: 1449 CEPVADGAETFADGVPREGLCRQPVLTRIGVMSLVKKKIQEFEHINGRWSLPELKPEVSV 1508
Query: 4240 KAANGSAQGSSRSTXXXXXXXXXXXXXXXDATETVNGATSEPATDAESEQ 4389
+ A + T DA+ TS+PAT A +E+
Sbjct: 1509 DKTSSRASSPAVKT----------STPTPDASYNNTPCTSKPATPAPAEK 1548
Score = 169 bits (427), Expect = 9e-40
Identities = 86/153 (56%), Positives = 112/153 (72%), Gaps = 2/153 (1%)
Frame = +1
Query: 4471 AARPSFKFNICDGGFTELHSLWANEEKVA-RNGKEYEIWYRRHDYWLLAGVVVHGYGRFQ 4647
A RP F FNI DGGFTELH+LW NEE+ A +GK EIW+RRHD+WLLAG+V+HGY R+Q
Sbjct: 1723 AERPRFMFNIADGGFTELHTLWQNEERAAISSGKMNEIWHRRHDFWLLAGIVIHGYARWQ 1782
Query: 4648 ANFNDIINDPRFSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHAN 4827
DI NDP+F+++NEPFK + ++K KF+ RRFKL+EQ+LVIEEQLRRAA+ N
Sbjct: 1783 ----DIQNDPQFAIVNEPFKSQVNKGNFLEMKNKFLARRFKLLEQALVIEEQLRRAAYLN 1838
Query: 4828 RHLQPDNVG-PLAQRFADLENIAESQANIAKES 4923
P + L RFA++E +AES +++KES
Sbjct: 1839 MTQDPSHPAMALNARFAEVECLAESHQHLSKES 1871
Score = 51.2 bits (121), Expect = 3e-04
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Frame = +1
Query: 241 TSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKY 420
+S ++ GL DV+ + EE+++ ++N K FS ++P I + NP +SKM + VK+
Sbjct: 67 SSAQLAKDWGLEDVDHTFTEEDYRELTNYKAFSQFMRPMIAKKNPKIPMSKMMTILGVKW 126
Query: 421 KEYQDHMAAQGKPVQKQARGSK---------TPAVSTPVIPPR 522
+E+ + +G A + + A ++P +PP+
Sbjct: 127 REFSSNNPFKGNAAAVAAAAAAAAIAVAEQVSAATASPEMPPQ 169
>gi|4325130|gb|AAD17276.1| dMi-2 protein [Drosophila melanogaster]
Length = 1982
Score = 1187 bits (3070), Expect = 0.0
Identities = 608/1183 (51%), Positives = 775/1183 (65%), Gaps = 30/1183 (2%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVKEEPAK 942
+ DYCE C+Q GE++LCDTCPRAYH VC++ ++EPPEG WSC HC G +EE
Sbjct: 376 HQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHCEADGG-AAEEEDDD 434
Query: 943 QNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVKPEHKIEKI 1122
++ EFC++CK+ LL CDSC ++H +C++PPL +P + W CPRC K EKI
Sbjct: 435 EHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGD-WRCPRCSCPPLTGKAEKI 493
Query: 1123 LCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVKWKYLSYWQCSWVSEML 1302
+ WRW + + K + + ++ + +F+KW +SYW C WV E+
Sbjct: 494 ITWRWAQRSNDDGPSTSKGSKNSNSRVRE-----------YFIKWHNMSYWHCEWVPEVQ 542
Query: 1303 LEVHFRMLILLYWRKNDSDAPPEFEESVTS--------RHHSD-------NDPYKLRERF 1437
L+VH ++I + RK D + PP+FEES+ + H D +D L ERF
Sbjct: 543 LDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQRHKDKVGMKANDDAEVLEERF 602
Query: 1438 YQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYW 1617
Y+ G+KPEW+ + R+INH++ YLVKW+EL YD++TWE + +I +AI Y+
Sbjct: 603 YKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDKSTWEEEGDDIQGLRQAI-DYY 661
Query: 1618 QHRESKLNEDIPKNVQKMIAKHREAKGLP------PXXXXXXXXXXXXXXXXXXYEVQPD 1779
Q + + ++ K K R++K P YE QP
Sbjct: 662 QDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPA 721
Query: 1780 YVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGP 1959
++ TG +LHPYQ+EG+NWLR+ W G D ILADEMGLGKT+Q++TFLYSL KEGHC+GP
Sbjct: 722 FLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGP 781
Query: 1960 FLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKM 2139
FL+A PLST++NWERE E W PDFY +TY+G +D+R V+RE+E SF EGA+R G K S++
Sbjct: 782 FLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIR-GSKVSRL 840
Query: 2140 KTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYR 2319
+TT+ KF+VLLTSYE I+MD L SI+W LVVDEAHRLK+NQS FF+ LN YTI Y+
Sbjct: 841 RTTQ-YKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIAYK 899
Query: 2320 VLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRR 2499
+LLTGTP S+++FN L+AF EF ++SKE+Q+++LH +LGPHMLRR
Sbjct: 900 LLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSKEEQVKRLHEMLGPHMLRR 959
Query: 2500 LKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKK 2679
LK DVL MPSKSE IVRVELSAMQKK+YK ILT+N++ALN K+GG SL+N++M+LKK
Sbjct: 960 LKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKK 1019
Query: 2680 CCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTR 2859
CCNHPYLF A EA G+YE +L K +GK VLL KML++LK HRVLIFSQMT+
Sbjct: 1020 CCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTK 1079
Query: 2860 MLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLAT 3039
MLDI+ED E E Y+YERIDG I G +RQ+AIDR+NAPGAQQF+FLLSTRAGGLGINLAT
Sbjct: 1080 MLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLAT 1139
Query: 3040 ADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHL 3219
ADTVIIYDSDWNPHNDIQAFSRAHR+GQ +KVMIYRFVT+ SVEE++T VAK+KM+L HL
Sbjct: 1140 ADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHL 1199
Query: 3220 VVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXXXX 3399
VVR G+GGK G +K ELDD+LR+GTE+LF ED D E + K A
Sbjct: 1200 VVRPGMGGK-GANFTKQELDDILRFGTEDLFKED-DKEEAIHYDDKAVA----------- 1246
Query: 3400 XXXXXRSNKEETPAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXXXX 3579
R+N+ EEK W NEYLSSFKVASY
Sbjct: 1247 -ELLDRTNR-------GIEEKESWANEYLSSFKVASY-----ATKEEEEEEETEIIKQDA 1293
Query: 3580 XXPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENM---GTDWSKQNQTQXX 3750
DP YW KLL+HHYEQ +E + LGKGKRVRKQ+NY + T N
Sbjct: 1294 ENSDPAYWVKLLRHHYEQHQEDVGRSLGKGKRVRKQVNYTDGGVVAADTTRDDSNWQDNG 1353
Query: 3751 XXXNESYRGSDNGDGLN------SXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNP 3912
N Y + DG + + +PPL+A+V G +E+LGFN
Sbjct: 1354 SEYNSEYSAGSDEDGGDDDFDDQNGAERKAKRRLERRDDRPLPPLLARVGGNIEVLGFNA 1413
Query: 3913 RQRKAFYGAVMRWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTF 4092
RQRK+F A+MR+GMPPQD+ SQWLVRDLR KSE+ F+AY SLFMRHLCEPGAD +TF
Sbjct: 1414 RQRKSFLNAIMRYGMPPQDAFNSQWLVRDLRGKSERNFKAYVSLFMRHLCEPGADNAETF 1473
Query: 4093 NDGVPREGLNRQHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEI 4221
DGVPREGL+RQHVL RIG++SL+R+KVQEFE NG +SMPE+
Sbjct: 1474 ADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHINGYYSMPEL 1516
Score = 243 bits (621), Expect = 3e-62
Identities = 125/204 (61%), Positives = 155/204 (75%), Gaps = 1/204 (0%)
Frame = +1
Query: 4486 FKFNICDGGFTELHSLWANEEKVARNGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFNDI 4665
F FNI DGGFTELH+LW NEEK A G+EYEIW+RRHDYWLLAG+V HGYGR+Q DI
Sbjct: 1727 FMFNIADGGFTELHTLWLNEEKAAVPGREYEIWHRRHDYWLLAGIVTHGYGRWQ----DI 1782
Query: 4666 INDPRFSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQPD 4845
ND RF+++NEPFK + +IK KF+ RRFKL+EQ+LVIEEQLRRAA+ N P
Sbjct: 1783 QNDIRFAIINEPFKMDVGKGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNLAQDPS 1842
Query: 4846 NVG-PLAQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMKADVSRLP 5022
+ L RFA++E +AES +++KES AGN+ ANAVLHK L QL+E+LSDMK+DVSRLP
Sbjct: 1843 HPAMSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSRLP 1902
Query: 5023 STFTQLATVTERLNMTERQILSRL 5094
+T ++ V +RL M+ER ILSRL
Sbjct: 1903 ATLARIPPVAQRLQMSERSILSRL 1926
Score = 46.6 bits (109), Expect = 0.007
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +1
Query: 247 EEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKYKE 426
E+VC+A + +VE +Y EEE Q ++ K F ++P + + NP K+ + K++E
Sbjct: 125 EDVCSAFSVCNVEIEYSEEELQSLTTYKAFMHHVRPILQKENPKIAAPKLVMLVAAKWRE 184
Query: 427 Y 429
+
Sbjct: 185 F 185
>gi|24667055|ref|NP_649154.2| CG8103-PA [Drosophila melanogaster]
gi|13124018|sp|O97159|CHDM_DROME Chromodomain helicase-DNA-binding
protein Mi-2 homolog (dMi-2)
gi|23093096|gb|AAF49099.2| CG8103-PA [Drosophila melanogaster]
Length = 1982
Score = 1187 bits (3070), Expect = 0.0
Identities = 608/1183 (51%), Positives = 775/1183 (65%), Gaps = 30/1183 (2%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVKEEPAK 942
+ DYCE C+Q GE++LCDTCPRAYH VC++ ++EPPEG WSC HC G +EE
Sbjct: 376 HQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHCEADGG-AAEEEDDD 434
Query: 943 QNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVKPEHKIEKI 1122
++ EFC++CK+ LL CDSC ++H +C++PPL +P + W CPRC K EKI
Sbjct: 435 EHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGD-WRCPRCSCPPLTGKAEKI 493
Query: 1123 LCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVKWKYLSYWQCSWVSEML 1302
+ WRW + + K + + ++ + +F+KW +SYW C WV E+
Sbjct: 494 ITWRWAQRSNDDGPSTSKGSKNSNSRVRE-----------YFIKWHNMSYWHCEWVPEVQ 542
Query: 1303 LEVHFRMLILLYWRKNDSDAPPEFEESVTS--------RHHSD-------NDPYKLRERF 1437
L+VH ++I + RK D + PP+FEES+ + H D +D L ERF
Sbjct: 543 LDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQRHKDKVGMKANDDAEVLEERF 602
Query: 1438 YQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYW 1617
Y+ G+KPEW+ + R+INH++ YLVKW+EL YD++TWE + +I +AI Y+
Sbjct: 603 YKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDKSTWEEEGDDIQGLRQAI-DYY 661
Query: 1618 QHRESKLNEDIPKNVQKMIAKHREAKGLP------PXXXXXXXXXXXXXXXXXXYEVQPD 1779
Q + + ++ K K R++K P YE QP
Sbjct: 662 QDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPA 721
Query: 1780 YVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGP 1959
++ TG +LHPYQ+EG+NWLR+ W G D ILADEMGLGKT+Q++TFLYSL KEGHC+GP
Sbjct: 722 FLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGP 781
Query: 1960 FLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKM 2139
FL+A PLST++NWERE E W PDFY +TY+G +D+R V+RE+E SF EGA+R G K S++
Sbjct: 782 FLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIR-GSKVSRL 840
Query: 2140 KTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYR 2319
+TT+ KF+VLLTSYE I+MD L SI+W LVVDEAHRLK+NQS FF+ LN YTI Y+
Sbjct: 841 RTTQ-YKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIAYK 899
Query: 2320 VLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRR 2499
+LLTGTP S+++FN L+AF EF ++SKE+Q+++LH +LGPHMLRR
Sbjct: 900 LLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSKEEQVKRLHEMLGPHMLRR 959
Query: 2500 LKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKK 2679
LK DVL MPSKSE IVRVELSAMQKK+YK ILT+N++ALN K+GG SL+N++M+LKK
Sbjct: 960 LKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKK 1019
Query: 2680 CCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTR 2859
CCNHPYLF A EA G+YE +L K +GK VLL KML++LK HRVLIFSQMT+
Sbjct: 1020 CCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTK 1079
Query: 2860 MLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLAT 3039
MLDI+ED E E Y+YERIDG I G +RQ+AIDR+NAPGAQQF+FLLSTRAGGLGINLAT
Sbjct: 1080 MLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLAT 1139
Query: 3040 ADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHL 3219
ADTVIIYDSDWNPHNDIQAFSRAHR+GQ +KVMIYRFVT+ SVEE++T VAK+KM+L HL
Sbjct: 1140 ADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHL 1199
Query: 3220 VVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXXXX 3399
VVR G+GGK G +K ELDD+LR+GTE+LF ED D E + K A
Sbjct: 1200 VVRPGMGGK-GANFTKQELDDILRFGTEDLFKED-DKEEAIHYDDKAVA----------- 1246
Query: 3400 XXXXXRSNKEETPAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXXXX 3579
R+N+ EEK W NEYLSSFKVASY
Sbjct: 1247 -ELLDRTNR-------GIEEKESWANEYLSSFKVASY-----ATKEEEEEEETEIIKQDA 1293
Query: 3580 XXPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENM---GTDWSKQNQTQXX 3750
DP YW KLL+HHYEQ +E + LGKGKRVRKQ+NY + T N
Sbjct: 1294 ENSDPAYWVKLLRHHYEQHQEDVGRSLGKGKRVRKQVNYTDGGVVAADTTRDDSNWQDNG 1353
Query: 3751 XXXNESYRGSDNGDGLN------SXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNP 3912
N Y + DG + + +PPL+A+V G +E+LGFN
Sbjct: 1354 SEYNSEYSAGSDEDGGDDDFDDQNGAERKAKRRLERRDDRPLPPLLARVGGNIEVLGFNA 1413
Query: 3913 RQRKAFYGAVMRWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTF 4092
RQRK+F A+MR+GMPPQD+ SQWLVRDLR KSE+ F+AY SLFMRHLCEPGAD +TF
Sbjct: 1414 RQRKSFLNAIMRYGMPPQDAFNSQWLVRDLRGKSERNFKAYVSLFMRHLCEPGADNAETF 1473
Query: 4093 NDGVPREGLNRQHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEI 4221
DGVPREGL+RQHVL RIG++SL+R+KVQEFE NG +SMPE+
Sbjct: 1474 ADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHINGYYSMPEL 1516
Score = 243 bits (621), Expect = 3e-62
Identities = 125/204 (61%), Positives = 155/204 (75%), Gaps = 1/204 (0%)
Frame = +1
Query: 4486 FKFNICDGGFTELHSLWANEEKVARNGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFNDI 4665
F FNI DGGFTELH+LW NEEK A G+EYEIW+RRHDYWLLAG+V HGYGR+Q DI
Sbjct: 1727 FMFNIADGGFTELHTLWLNEEKAAVPGREYEIWHRRHDYWLLAGIVTHGYGRWQ----DI 1782
Query: 4666 INDPRFSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQPD 4845
ND RF+++NEPFK + +IK KF+ RRFKL+EQ+LVIEEQLRRAA+ N P
Sbjct: 1783 QNDIRFAIINEPFKMDVGKGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNLAQDPS 1842
Query: 4846 NVG-PLAQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMKADVSRLP 5022
+ L RFA++E +AES +++KES AGN+ ANAVLHK L QL+E+LSDMK+DVSRLP
Sbjct: 1843 HPAMSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSRLP 1902
Query: 5023 STFTQLATVTERLNMTERQILSRL 5094
+T ++ V +RL M+ER ILSRL
Sbjct: 1903 ATLARIPPVAQRLQMSERSILSRL 1926
Score = 46.6 bits (109), Expect = 0.007
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +1
Query: 247 EEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKYKE 426
E+VC+A + +VE +Y EEE Q ++ K F ++P + + NP K+ + K++E
Sbjct: 125 EDVCSAFSVCNVEIEYSEEELQSLTTYKAFMHHVRPILQKENPKIAAPKLVMLVAAKWRE 184
Query: 427 Y 429
+
Sbjct: 185 F 185
>gi|47221566|emb|CAF97831.1| unnamed protein product [Tetraodon
nigroviridis]
Length = 1989
Score = 1163 bits (3008), Expect = 0.0
Identities = 627/1298 (48%), Positives = 783/1298 (60%), Gaps = 125/1298 (9%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHG---------- 912
+ DYCE C+Q GE++LCDTCPRAYH VC+D +ME+ PEG WSC HC + G
Sbjct: 303 HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEARDDLS 362
Query: 913 ------PEVVKEEPAKQND----EFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKE 1062
E ++E ++ D EFC++CK+ LL CD+C S+H +C++PPL E+P
Sbjct: 363 DGEGEDEEDRRDEGVEEEDDHHIEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNG 422
Query: 1063 ETWSCPRCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXX 1242
E W CPRC+ + K++K+L WRW + P P P+ + D
Sbjct: 423 E-WICPRCKCPPMKGKVQKVLTWRWGDPPAPTPVPRPADLPPDAP---DPPPLAGRRERE 478
Query: 1243 FFVKWKYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFE-------ESVTSRHH 1401
FFVKW +SYW CSWV E+ LE++ +++ Y RK D D PP + + T R +
Sbjct: 479 FFVKWCNMSYWHCSWVLELQLELNCQVMFRNYQRKTDMDEPPPVDFGGEGDDDKSTKRKN 538
Query: 1402 SDNDPYKLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSN 1581
D ++ E +YG+K EW+ IHR++NH K+ YL+KW++L YDQ+TWE +D +
Sbjct: 539 KDPLIARMEEEICRYGVKMEWLMIHRVLNHSVDKKNNVHYLIKWRDLPYDQSTWESEDMD 598
Query: 1582 IANYEEAIIKYWQHRESKLNED-IPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXX 1758
I Y+ YW HRE + E+ P K K ++A+ P
Sbjct: 599 IPEYDPYKQTYWNHRELMVGEEGRPGKKLKKTVKVKKAERPP---------ANPVVDPTI 649
Query: 1759 XYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMK 1938
++ QPDY+ TGG LHPYQLEGLNWLR W+ TD ILADEMGLGKTVQ+ FLYSL K
Sbjct: 650 KFDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQATDTILADEMGLGKTVQTAVFLYSLYK 709
Query: 1939 EGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRS 2118
EGH KGPFL++APLSTIINWERE E W PD YVVTYVG +D+R V+RE+EFSF A+R
Sbjct: 710 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEGNAIRG 769
Query: 2119 GPKASKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLN 2298
G KASKMK +KFHVLLTSYE I +D+ +L SIEW LVVDEAHRLKNNQS FF+ LN
Sbjct: 770 GKKASKMKKDSTVKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLN 829
Query: 2299 EYTIHYRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLL 2478
Y + +++LLTGTP + ERFN LE F EF +I+KE QI+KLH++L
Sbjct: 830 NYQLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEGQIKKLHDML 889
Query: 2479 GPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMN 2658
GPHMLRRLKADV +L A+Q+K+YK ILTRNF+ALN + GG Q+SL+N
Sbjct: 890 GPHMLRRLKADVF-------------KLHAIQEKYYKFILTRNFEALNTRGGGNQVSLLN 936
Query: 2659 VLMELKKCCNHPYLFVKAEL--------------------------------EAPKEKNG 2742
V+M+LKKCCNHPYLF A EAPK NG
Sbjct: 937 VVMDLKKCCNHPYLFPAAATVRFKYCSCDCGLVRKRNLFNALTLFALLLCIQEAPKLPNG 996
Query: 2743 MYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDG 2922
MYEG +L+K+SGK +LLQKM+RKLK+GGHRVL+FSQMT+MLD++ED E EGY+YERIDG
Sbjct: 997 MYEGNSLVKSSGKLMLLQKMMRKLKEGGHRVLVFSQMTKMLDLLEDFLENEGYKYERIDG 1056
Query: 2923 SIMGQMRQDAIDRYN--------------------------------APGAQQFIFLLST 3006
+ G MRQ+AIDR+N APGA QF FLLST
Sbjct: 1057 GVTGNMRQEAIDRFNGEFKAVVCLDFKTQLQRSNNVLTFCLLSSSFTAPGAPQFAFLLST 1116
Query: 3007 RAGGLGINLATADTVIIYDSDWNPHNDI-----------------------------QAF 3099
RAGGLGINLA+ADTVIIYDSDWNPHNDI QAF
Sbjct: 1117 RAGGLGINLASADTVIIYDSDWNPHNDIQVCSATARICVFVSDRIKEDNAVCFVGALQAF 1176
Query: 3100 SRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEGKTMSKTELD 3279
SRAHR+GQ KVMIYRFVTK SVEE+IT VAKKKM+L HLVVR GLG K G +MSK ELD
Sbjct: 1177 SRAHRIGQNRKVMIYRFVTKASVEERITQVAKKKMMLTHLVVRPGLGSKTG-SMSKQELD 1235
Query: 3280 DVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXXXXXXXXXRSNKEETPAGEDGEE 3459
D+L++GTEELF +++ G+G K+ ++ ++ N++ T +
Sbjct: 1236 DILKFGTEELFKDEV----GDGDNKEDDSS--VIHYDDHAIDRLLDRNQDAT-----DDT 1284
Query: 3460 KAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXXXXXXPDPDYWEKLLKHHYEQDR 3639
+ + NEYLSSFKVA Y DPDYWEKLL+HHYEQ +
Sbjct: 1285 ELQSMNEYLSSFKVAQY---VVKDEDDEEEEVEREVIKQEESVDPDYWEKLLRHHYEQQQ 1341
Query: 3640 EIELQKLGKGKRVRKQINYASENM-GTDWSK---QNQTQXXXXXNESYRGSDNGDGLNSX 3807
E + LGKGKR RK +NY + DW + NQ+ E D NS
Sbjct: 1342 EDLARNLGKGKRTRKPVNYNDGSQEERDWQEDQSDNQSDYSVASEEGDEDFDERSEANS- 1400
Query: 3808 XXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAFYGAVMRWGMPPQDSHQSQW 3987
+PPL+A+V G +E+LGFN RQRKAF AVMR+GMPPQD+ +QW
Sbjct: 1401 -RRPNRKGLRNDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAVMRYGMPPQDAFTNQW 1459
Query: 3988 LVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNRQHVLGRIGLLSLVR 4167
LVRDLR KSEK F+AY SLFMRHLCEPGADG +TF DGVPREGL+RQHVL RIG++SL+R
Sbjct: 1460 LVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIR 1519
Query: 4168 RKVQEFEQYNGQWSMPEIQDEVLAKAANGSAQGSSRST 4281
+KVQEFE NGQWSMP + + K A A G T
Sbjct: 1520 KKVQEFEHVNGQWSMPWMAELEENKRAAALAAGEDPKT 1557
Score = 216 bits (551), Expect = 4e-54
Identities = 126/290 (43%), Positives = 168/290 (57%), Gaps = 34/290 (11%)
Frame = +1
Query: 4336 ETVNGATSEPATDAESEQNAPVDEPMDTDXXXXXXXXXXXXXXXRAARPSFKFNICDGGF 4515
E +G +E AT ++ +N + +A + F FNI DGGF
Sbjct: 1699 EEKDGVKTEEATKLQNGENTK-------EGATAASVVNVSEEKKKATKQRFMFNIADGGF 1751
Query: 4516 TELHSLWANEEKVAR-NGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFNDIINDPRFSVL 4692
TELHSLW NEE+ A K +EIW+RRHDYWLLAG++ HGY R+Q D+ ND RF++L
Sbjct: 1752 TELHSLWQNEERAATVTKKTFEIWHRRHDYWLLAGIIQHGYARWQ----DVQNDVRFAIL 1807
Query: 4693 NEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQPDNVG-PLAQR 4869
NEPFK + +IK KF+ RRFKL+EQ+LVIEEQLRRAA+ N P + L R
Sbjct: 1808 NEPFKGEMSRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMTEDPAHPSMALNTR 1867
Query: 4870 FADLENIAESQANIAKESSAGNRNANAVLHK----------------------------- 4962
F+++E +AES +++KES +GN+ ANAVLHK
Sbjct: 1868 FSEVECLAESHQHLSKESMSGNKPANAVLHKGKLRLQVEPTDGFLNVRSPSGELKPRLFL 1927
Query: 4963 ---TLVQLDEILSDMKADVSRLPSTFTQLATVTERLNMTERQILSRLTTK 5103
L QL+E+LSDMKADV+RLP+T ++ V RL M+ER ILSRL ++
Sbjct: 1928 ACPVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLASR 1977
Score = 47.8 bits (112), Expect = 0.003
Identities = 21/87 (24%), Positives = 43/87 (49%)
Frame = +1
Query: 241 TSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKY 420
+S ++ G+ D++ + +E++ ++N K FS ++P I NP VSKM + K+
Sbjct: 69 SSAQLLETWGMKDIDHVFTQEDYNSLTNYKAFSQFVRPLIAAKNPKIAVSKMMTLMMAKW 128
Query: 421 KEYQDHMAAQGKPVQKQARGSKTPAVS 501
+E+ + +G A + A +
Sbjct: 129 REFSTNNPLKGSATANAALAAANVAAA 155
>gi|50759145|ref|XP_417537.1| PREDICTED: similar to chromodomain
helicase DNA binding protein 5 [Gallus gallus]
Length = 1395
Score = 1126 bits (2912), Expect = 0.0
Identities = 612/1232 (49%), Positives = 749/1232 (60%), Gaps = 140/1232 (11%)
Frame = +1
Query: 946 NDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVKPEHKIEKIL 1125
+ ++C++C++ ++LCD+C ++H C+DP L + P E WSCP C + K+++IL
Sbjct: 43 HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAP-EGKWSCPHC-CPPLKGKVQRIL 100
Query: 1126 CWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVKWKYLSYWQCSWVSEMLL 1305
W WKE P P P + A + L FFVKW LSYW CSWV E+ L
Sbjct: 101 HWAWKEPPAPLP--SALPAPDAELALPLPKVLEGIPEREFFVKWAGLSYWHCSWVKELQL 158
Query: 1306 EVHFRMLILLYWRKNDSDAPPEFE-----ESVTSRHHSDNDPY--KLRERFYQYGIKPEW 1464
E++ ++ Y RKND D PP F+ E + DP+ K+ ERFY+YGIKPEW
Sbjct: 159 ELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRKNKDPHYAKMEERFYRYGIKPEW 218
Query: 1465 MQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYWQHRESKLNE 1644
M IHRI+NH K YL+KWK+L YDQ TWE D+ +I YE + YW HRE L E
Sbjct: 219 MMIHRILNHSFDKKGDIHYLIKWKDLPYDQCTWEIDEIDIPYYENLKLLYWNHRELMLGE 278
Query: 1645 DIP--KNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQPDYVTETGGKLHPYQ 1818
D K + K K +E K P ++ QP Y+ TGG LHPYQ
Sbjct: 279 DTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVK-------FDKQPWYIDATGGTLHPYQ 331
Query: 1819 LEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINW 1998
LEGLNWLR W+ GTD ILADEMGLGKTVQ++ FLYSL KEGH KGP+L++APLSTIINW
Sbjct: 332 LEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINW 391
Query: 1999 EREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLT 2178
ERE E W PDFYVVTY G +++R V+RE+EFSF + A+RSG K +MK +KFHVLLT
Sbjct: 392 EREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLT 451
Query: 2179 SYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPXXXXXX 2358
SYE I +D+ +L SIEW LVVDEAHRLKNNQS FF+ LN Y I Y++LLTGTP
Sbjct: 452 SYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLE 511
Query: 2359 XXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKS 2538
+ ERFN LE F EF +ISKEDQI+KLH+LLGPHMLRRLKADV MP+K+
Sbjct: 512 ELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKT 571
Query: 2539 ELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKAEL 2718
ELIVRVELS MQKK+YK ILTRNF+ALN K GG Q+SL+N++M+LKKCCNHPYLF A +
Sbjct: 572 ELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAV 631
Query: 2719 EAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQ---------------- 2850
EAP NG Y+G +L+K+SGK +LLQKML+KL+DGGHRVLIFSQ
Sbjct: 632 EAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQVCSREGLVKLPLEDET 691
Query: 2851 ------------------------------------MTRMLDIMEDLCEYEGYRYERIDG 2922
MT+MLD++ED EYEGY+YERIDG
Sbjct: 692 SGALVCRAAACLGPWAVGMTTAVAVLSPREHWGLHCMTKMLDLLEDFLEYEGYKYERIDG 751
Query: 2923 SIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDI---- 3090
I G +RQ+AIDR+NAPGAQQF FLLSTRAGGLGINLATADTVIIYDSDWNPHNDI
Sbjct: 752 GITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQVYY 811
Query: 3091 ----------------------------------------QAFSRAHRLGQKHKVMIYRF 3150
QAFSRAHR+GQ KVMIYRF
Sbjct: 812 FFFSFQYSLSVRGLHEEDGLACSQRRWKEKCKAYNDALCLQAFSRAHRIGQNKKVMIYRF 871
Query: 3151 VTKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDA 3330
VT+ SVEE+IT VAK+KM+L HLVVR GLG K G +M+K ELDD+L++GTEELF +D++
Sbjct: 872 VTRASVEERITQVAKRKMMLTHLVVRPGLGSKSG-SMTKQELDDILKFGTEELFKDDVEG 930
Query: 3331 AEGEGSEKKGAAA----QEIVWXXXXXXXXXXRSNKEETPAG------------------ 3444
+G A + + + TP G
Sbjct: 931 MVSQGQRLTMPDAVTPFSDTLSTKGGAVTPGMKKKHGGTPPGDNKDVDDSSVIHYDDAAI 990
Query: 3445 -------EDGEEKAEWQ--NEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXXXXXXPDPD 3597
+D + E Q NEYLSSFKVA Y DPD
Sbjct: 991 SKLLDRNQDATDDTELQNMNEYLSSFKVAQY----VVREEDGVEEVEREIIKQEENVDPD 1046
Query: 3598 YWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSKQNQTQXXXXXNESYRG 3777
YWEKLL+HHYEQ +E + LGKGKR+RKQ+NY N + ++ Q + +E G
Sbjct: 1047 YWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNY---NDASQEDQEWQDELSDNQSEYSIG 1103
Query: 3778 SDNGD----GLNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAFYGAVM 3945
S++ D +PPL+A+V G +E+LGFN RQRKAF A+M
Sbjct: 1104 SEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIM 1163
Query: 3946 RWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNR 4125
RWGMPPQD+ S WLVRDLR KSEK FRAY SLFMRHLCEPGADG +TF DGVPREGL+R
Sbjct: 1164 RWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSR 1223
Query: 4126 QHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEI 4221
QHVL RIG++SLVR+KVQEFE NG++S P++
Sbjct: 1224 QHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDM 1255
Score = 82.4 bits (202), Expect = 1e-13
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHC 900
+ DYCE C+Q GE++LCDTCPRAYH VC+D +E+ PEG WSC HC
Sbjct: 43 HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 88
>gi|47211690|emb|CAF91815.1| unnamed protein product [Tetraodon
nigroviridis]
Length = 1369
Score = 1107 bits (2863), Expect = 0.0
Identities = 615/1349 (45%), Positives = 778/1349 (57%), Gaps = 20/1349 (1%)
Frame = +1
Query: 241 TSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKY 420
TS ++ G+ D++ + EE+++ ++N K FS ++P I NP VSKM + K+
Sbjct: 112 TSSQLLDDWGMEDIDHVFTEEDYRSLTNYKAFSQFVRPLIAARNPKIAVSKMMMVLGAKW 171
Query: 421 KEYQDHMAAQGKPVQKQARGSKTPAVSTPVIPPRSXXXXXXXXXXXXXXXXXXXXXQEFE 600
+E+ Q RG+ AV V P + +E E
Sbjct: 172 REFS---------TQNPLRGASASAVLATVSVPSTS--------------------EEDE 202
Query: 601 AFIKQQEQLEDDLVKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNDYCE 780
+ ED + + DYCE
Sbjct: 203 PEV--DSDFEDGSMNSVSMSEGSNSRNSRSKKKSLKSKPKKKKEAEDGDGYETDHQDYCE 260
Query: 781 ECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVKEEPAKQNDE-- 954
C+Q GE++LCDTCPRAYH VC+D +ME+ PEG WSC HC + G + E + DE
Sbjct: 261 VCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCEKEGIQWEAREEGSEGDEDN 320
Query: 955 -------------FCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETV 1095
FC++CK+ LL CDSC S+H +C++PPL E+P E W CPRC
Sbjct: 321 GDVGEMEDDHHMEFCRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIPNGE-WICPRCTCP 379
Query: 1096 KPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVKWKYLSYW 1275
+ K++KIL WRW E P P P+ +D FF KW +SYW
Sbjct: 380 SMKGKVQKILTWRWGEPPTPTPVPCLPHLPADAP---SHVPLAGRPEREFFAKWSNMSYW 436
Query: 1276 QCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFEESVTSRHHSDNDPYKLRERFYQYGIK 1455
CSWV+E+ LE+H +++ + RKND D PP + +G
Sbjct: 437 HCSWVTELQLELHCQVMFRNFQRKNDMDEPPPVD----------------------FGEG 474
Query: 1456 PEWMQIHRIINHQSYAKSQQDYL---VKWKELSYDQATWERDDSNIANYEEAIIKYWQHR 1626
E + R YA+ ++ YL +K + L I + HR
Sbjct: 475 DEDKSVKRKNKDPMYAQLEEKYLRFGIKMEWLM-------------------IHRILNHR 515
Query: 1627 ESKLNEDIPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQPDYVTETGGKL 1806
E + E+ + + + PP +E QP+Y+ TGG L
Sbjct: 516 ELMMGEEGKPGRKVRLRGRGKRPDRPPENPVVDPTIK--------FERQPEYLDSTGGTL 567
Query: 1807 HPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLST 1986
HPYQLEGLNWLR W+ GTD ILADEMGLGKTVQ+ FLYSL KEGH KGPFL++APLST
Sbjct: 568 HPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLST 627
Query: 1987 IINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFH 2166
IINWERE E W PD YVVTYVG +D+R V+RE+EFSF + A+R G KAS+MK ++KFH
Sbjct: 628 IINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEDNAIRGGKKASRMKKDTSIKFH 687
Query: 2167 VLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPXX 2346
VLLTSYE I +D +L S+ W LVVDEAHRLKNNQS FF+ LN Y++ +++LLTGTP
Sbjct: 688 VLLTSYELITIDMAVLGSVNWACLVVDEAHRLKNNQSKFFRVLNNYSLQHKLLLTGTPLQ 747
Query: 2347 XXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRLKADVLTGM 2526
+ ERF++LE F EF +I+KEDQI+KLH++LGPHMLRRLKADV M
Sbjct: 748 NNLEELFHLLNFLTPERFSKLEIFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKHM 807
Query: 2527 PSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFV 2706
PSK+ELIVRVELS+MQKK+YK ILT+NF+ALN K GG Q+SL+NV+M+LKKCCNHPYLF
Sbjct: 808 PSKTELIVRVELSSMQKKYYKFILTKNFEALNTKGGGNQVSLLNVVMDLKKCCNHPYLFP 867
Query: 2707 KAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLC 2886
A +EAPK NGMY+G+AL K SGK +LLQKM+R+LK+GGHRVLIFSQMT+MLD++ED
Sbjct: 868 TAAIEAPKMPNGMYDGSALTKASGKLLLLQKMMRRLKEGGHRVLIFSQMTKMLDLLEDFL 927
Query: 2887 EYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDS 3066
E EGY+YERIDG I G MRQ+AIDR+NAPGAQQF FLLSTRAGGLGINLATADTVIIYDS
Sbjct: 928 ENEGYKYERIDGGITGGMRQEAIDRFNAPGAQQFAFLLSTRAGGLGINLATADTVIIYDS 987
Query: 3067 DWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLGGK 3246
DWNPHNDIQAFSRAHR+GQ KVMIYRFVTK SVEE+IT VAKKKM+L HLVVR GLG K
Sbjct: 988 DWNPHNDIQAFSRAHRIGQNRKVMIYRFVTKASVEERITQVAKKKMMLTHLVVRPGLGSK 1047
Query: 3247 EGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXXXXXXXXXRSNK 3426
G +MSK ELDD+L++GTE LF + EGE E+ + I+ N+
Sbjct: 1048 TG-SMSKQELDDILKFGTEALFKD-----EGENKEEDSS----IIHYDDKAIDRLLDRNQ 1097
Query: 3427 EETPAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXXXXXXPDPDYWE 3606
+ T + + + NEYLSSFKVA Y DPDYWE
Sbjct: 1098 DAT-----DDTELQSMNEYLSSFKVAQY---VVKDEEDEEEEVQREIIKQEESVDPDYWE 1149
Query: 3607 KLLKHHYEQDREIELQKLGKGKRVRKQINY--ASENMGTDWSKQNQTQXXXXXNESYRGS 3780
KLL+HHYEQ +E + LGKGKR+RKQ+NY S+ DW S G
Sbjct: 1150 KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRADWQDDQSDGQSDYSVASEEGD 1209
Query: 3781 DNGDGLNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAFYGAVMRWGMP 3960
++ D + ++ + E G R+RK+
Sbjct: 1210 EDFD--------ERTEGRVSFKKCALKNVVCRRGEGKE--GAGERKRKS----------- 1248
Query: 3961 PQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNRQHVLG 4140
D + W + L + FRAY SLFMRHLCEPGADG +TF DGVPREGL+RQHVL
Sbjct: 1249 -SDLNGFSWCIVGLVSDITLSFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLT 1307
Query: 4141 RIGLLSLVRRKVQEFEQYNGQWSMPEIQD 4227
RIG++SL+R+KVQEFE NGQWS+P + D
Sbjct: 1308 RIGVMSLIRKKVQEFEHVNGQWSLPWMAD 1336
>gi|7512678|pir||T17269 hypothetical protein DKFZp434N231.1 - human
(fragment)
gi|5911978|emb|CAB55959.1| hypothetical protein [Homo sapiens]
Length = 1388
Score = 1070 bits (2767), Expect = 0.0
Identities = 555/972 (57%), Positives = 666/972 (68%), Gaps = 35/972 (3%)
Frame = +1
Query: 1420 KLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEE 1599
K+ ERFY+YGIKPEWM IHRI+NH K YL+KWK+L YDQ TWE DD +I Y+
Sbjct: 11 KMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDN 70
Query: 1600 AIIKYWQHRESKLNED--IPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQ 1773
YW HRE L ED +PK + K K R+ K P ++ Q
Sbjct: 71 LKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQEKPPDTPIVDPTVK-------FDKQ 123
Query: 1774 PDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCK 1953
P Y+ TGG LHPYQLEGLNWLR W+ GTD ILADEMGLGKTVQ++ FLYSL KEGH K
Sbjct: 124 PWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSK 183
Query: 1954 GPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKAS 2133
GP+L++APLSTIINWERE E W PDFYVVTY G +++R V+RE+EFSF + A+RSG K
Sbjct: 184 GPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVF 243
Query: 2134 KMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIH 2313
+MK +KFHVLLTSYE I +D+ IL SIEW LVVDEAHRLKNNQS FF+ LN Y I
Sbjct: 244 RMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKID 303
Query: 2314 YRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHML 2493
Y++LLTGTP + ERFN LE F EF +ISKEDQI+KLH+LLGPHML
Sbjct: 304 YKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 363
Query: 2494 RRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMEL 2673
RRLKADV MP+K+ELIVRVELS MQKK+YK ILTRNF+ALN K GG Q+SL+N++M+L
Sbjct: 364 RRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDL 423
Query: 2674 KKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQM 2853
KKCCNHPYLF A +EAP NG Y+G++L+K+SGK +LLQKML+KL+D GHRVLIFSQM
Sbjct: 424 KKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 483
Query: 2854 TRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINL 3033
T+MLD++ED EYEGY+YERIDG I G +RQ+AIDR+NAPGAQQF FLLSTRAGGLGINL
Sbjct: 484 TKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL 543
Query: 3034 ATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLN 3213
ATADTVIIYDSDWNPHNDIQAFSRAHR+GQ KVMIYRFVT+ SVEE+IT VAK+KM+L
Sbjct: 544 ATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLT 603
Query: 3214 HLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXX 3393
HLVVR GLG K G +M+K ELDD+L++GTEELF +D++ +G ++ ++
Sbjct: 604 HLVVRPGLGSKSG-SMTKQELDDILKFGTEELFKDDVEGMMSQG-QRPVTPIPDVQSSKG 661
Query: 3394 XXXXXXXRSNKEETPAG-------------------------EDGEEKAEWQ--NEYLSS 3492
+ TP G +D + E Q NEYLSS
Sbjct: 662 GNLAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSS 721
Query: 3493 FKVASYQXXXXXXXXXXXXXXXXXXXXXXXXPDPDYWEKLLKHHYEQDREIELQKLGKGK 3672
FKVA Y DPDYWEKLL+HHYEQ +E + LGKGK
Sbjct: 722 FKVAQY----VVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGK 777
Query: 3673 RVRKQINYASENMGTDWSKQNQTQXXXXXNESYRGSDNGD------GLNSXXXXXXXXXX 3834
R+RKQ+NY N + ++ Q + +E GS++ D
Sbjct: 778 RIRKQVNY---NDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQL 834
Query: 3835 XXXXXXXMPPLMAKVNGQVEILGFNPRQRKAFYGAVMRWGMPPQDSHQSQWLVRDLRNKS 4014
+PPL+A+V G +E+LGFN RQRKAF A+MRWGMPPQD+ S WLVRDLR KS
Sbjct: 835 KSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKS 894
Query: 4015 EKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNRQHVLGRIGLLSLVRRKVQEFEQY 4194
EK FRAY SLFMRHLCEPGADG +TF DGVPREGL+RQHVL RIG++SLVR+KVQEFE
Sbjct: 895 EKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHV 954
Query: 4195 NGQWSMPEIQDE 4230
NG++S P++ E
Sbjct: 955 NGKYSTPDLIPE 966
Score = 238 bits (608), Expect = 9e-61
Identities = 131/257 (50%), Positives = 170/257 (65%), Gaps = 2/257 (0%)
Frame = +1
Query: 4348 GATSEPATDAESEQNAPVDEPMDTDXXXXXXXXXXXXXXXRAARPSFKFNICDGGFTELH 4527
G +SE D + A EP++T + + F FNI DGGFTELH
Sbjct: 1094 GDSSELRPD---DTKAEEKEPIETQQNGDKEEDDEGKKEDKKGKFKFMFNIADGGFTELH 1150
Query: 4528 SLWANEEKVA-RNGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFNDIINDPRFSVLNEPF 4704
+LW NEE+ A +GK Y+IW+RRHDYWLLAG+V HGY R+Q DI NDPR+ +LNEPF
Sbjct: 1151 TLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQ----DIQNDPRYMILNEPF 1206
Query: 4705 KEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQPDNVG-PLAQRFADL 4881
K + ++K KF+ RRFKL+EQ+LVIEEQLRRAA+ N P++ L R A++
Sbjct: 1207 KSEVHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEV 1266
Query: 4882 ENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMKADVSRLPSTFTQLATVTERL 5061
E +AES +++KES AGN+ ANAVLHK L QL+E+LSDMKADV+RLPS +++ V RL
Sbjct: 1267 ECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARL 1326
Query: 5062 NMTERQILSRLTTKDED 5112
M+ER ILSRLT + D
Sbjct: 1327 QMSERSILSRLTNRAGD 1343
>gi|26330021|dbj|BAC28749.1| unnamed protein product [Mus musculus]
Length = 1045
Score = 1050 bits (2715), Expect = 0.0
Identities = 531/939 (56%), Positives = 659/939 (69%), Gaps = 23/939 (2%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHG---------- 912
+ DYCE C+Q GE++LCDTCPRAYH VC+D +ME+ PEG WSC HC + G
Sbjct: 114 HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNS 173
Query: 913 --PEVVKE---EPAKQND---EFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEET 1068
E+++E +P +++D EFC++CK+ LL CD+C S+H +C++PPL E+P E
Sbjct: 174 EGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGE- 232
Query: 1069 WSCPRCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFF 1248
W CPRC + K++KIL W+W + P P P+ +A D FF
Sbjct: 233 WLCPRCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDA---DPNTPSPKPLEGRPERQFF 289
Query: 1249 VKWKYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFE---ESVTSRHHSDNDPY 1419
VKW+ +SYW CSWVSE+ LE+H +++ Y RKND D PP + + SR + DP
Sbjct: 290 VKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNKDPK 349
Query: 1420 --KLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANY 1593
++ ERFY+YGIKPEWM IHRI+NH K YL+KW++L YDQA+WE +D I +Y
Sbjct: 350 FAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDY 409
Query: 1594 EEAIIKYWQHRESKLNEDIPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQ 1773
+ YW HRE E+ + K R+ + P YE Q
Sbjct: 410 DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVK---------YERQ 460
Query: 1774 PDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCK 1953
P+Y+ TGG LHPYQ+EGLNWLR W+ GTD ILADEMGLGKTVQ+ FLYSL KEGH K
Sbjct: 461 PEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSK 520
Query: 1954 GPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKAS 2133
GPFL++APLSTIINWERE E W PD YVVTYVG +D+R ++RE+EFSF + A+R G KAS
Sbjct: 521 GPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKAS 580
Query: 2134 KMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIH 2313
+MK ++KFHVLLTSYE I +D IL SI+W L+VDEAHRLKNNQS FF+ LN Y++
Sbjct: 581 RMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQ 640
Query: 2314 YRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHML 2493
+++LLTGTP + ERF+ LE F EF +I+KEDQI+KLH++LGPHML
Sbjct: 641 HKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHML 700
Query: 2494 RRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMEL 2673
RRLKADV MPSK+ELIVRVELS MQKK+YK ILTRNF+ALN + GG Q+SL+NV+M+L
Sbjct: 701 RRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDL 760
Query: 2674 KKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQM 2853
KKCCNHPYLF A +EAPK NGMY+G+ALI+ SGK +LLQKML+ LK+GGHRVLIFSQM
Sbjct: 761 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 820
Query: 2854 TRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINL 3033
T+MLD++ED E+EGY+YERIDG I G MRQ+AIDR+NAPGAQQF FLLSTRAGGLGINL
Sbjct: 821 TKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL 880
Query: 3034 ATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLN 3213
ATADTVIIYDSDWNPHNDIQAFSRAHR+GQ KVMIYRFVT+ SVEE+IT VAKKKM+L
Sbjct: 881 ATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLT 940
Query: 3214 HLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXX 3393
HLVVR GLG K G +MSK ELDD+L++GTEELF + +A +G G K+G + I +
Sbjct: 941 HLVVRPGLGSKTG-SMSKQELDDILKFGTEELFKD--EATDGGGDNKEGEDSSVIHYDDK 997
Query: 3394 XXXXXXXRSNKEETPAGEDGEEKAEWQNEYLSSFKVASY 3510
R N++ET ED E + NEYLSSFKVA Y
Sbjct: 998 AIERLLDR-NQDET---EDTE--LQGMNEYLSSFKVAQY 1030
>gi|34872518|ref|XP_243049.2| similar to chromodomain helicase DNA
binding protein 5 [Rattus norvegicus]
Length = 2141
Score = 1030 bits (2662), Expect = 0.0
Identities = 526/964 (54%), Positives = 643/964 (66%), Gaps = 48/964 (4%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHG---------- 912
+ DYCE C+Q GE++LCDTCPRAYH VC+D +E+ PEG WSC HC + G
Sbjct: 381 HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDE 440
Query: 913 --PEVVKEEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRC 1086
E EE + EFC++CK+ LL CD+C S+H +C++PPL E+P E W CPRC
Sbjct: 441 EEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGE-WLCPRC 499
Query: 1087 ETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVKWKYL 1266
+ K+++IL WRW E P P G + + FFVKW L
Sbjct: 500 TCPPLKGKVQRILHWRWTEPP--APFMVGLPGPEVEPGMPPPRPLEGIPEREFFVKWAGL 557
Query: 1267 SYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFE-----ESVTSRHHSDNDPY--KL 1425
SYW CSWV E+ LE++ ++ Y RKND D PP F+ E S + DP K+
Sbjct: 558 SYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKM 617
Query: 1426 RERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAI 1605
ERFY+YGIKPEWM +HRI+NH K YL+KWK+L YDQ TWE D+ +I Y+
Sbjct: 618 EERFYRYGIKPEWMMVHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDEIDIPYYDNLK 677
Query: 1606 IKYWQHRESKLNED--IPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQPD 1779
YW HRE L ED +PK + K K ++ K P ++ QP
Sbjct: 678 QTYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVK-------FDKQPW 730
Query: 1780 YVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGP 1959
Y+ TGG LHPYQLEGLNWLR W+ GTD ILADEMGLGKTVQ++ FLYSL KEGH KGP
Sbjct: 731 YIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGP 790
Query: 1960 FLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKM 2139
+L++APLSTIINWERE E W PDFYVVTY G +++R V+RE+EFSF + A+R G K +M
Sbjct: 791 YLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRGGKKVFRM 850
Query: 2140 KTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYR 2319
K +KFHVLLTSYE I +D+ IL SIEW LVVDEAHRLKNNQS FF+ LN Y I Y+
Sbjct: 851 KKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYK 910
Query: 2320 VLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRR 2499
+LLTGTP + ERFN LE F EF +ISKEDQI+KLH+LLGPHMLRR
Sbjct: 911 LLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRR 970
Query: 2500 LKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKK 2679
LKADV MP+K+ELIVRVELS MQKK+YK ILTRNF+ALN K GG Q+SL+N++M+LKK
Sbjct: 971 LKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKK 1030
Query: 2680 CCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTR 2859
CCNHPYLF A +EAP NG Y+G++L+K+SGK +LLQKML+KL+D GHRVLIFSQMT+
Sbjct: 1031 CCNHPYLFPVAAVEAPMLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTK 1090
Query: 2860 MLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLAT 3039
MLD++ED EYEGY+YERIDG I G +RQ+AIDR+NAPGAQQF FLLSTRAGGLGINLAT
Sbjct: 1091 MLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1150
Query: 3040 ADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHL 3219
ADTVIIYDSDWNPHNDIQAFSRAHR+GQ KVMIYRFVT+ SVEE+IT VAK+KM+L HL
Sbjct: 1151 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHL 1210
Query: 3220 VVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXXXX 3399
VVR GLG K G +M+K ELDD+L++GTEELF +D++ +G ++ ++
Sbjct: 1211 VVRPGLGSKSG-SMTKQELDDILKFGTEELFKDDVEGMMSQG-QRPTTPIPDVQSTKGGS 1268
Query: 3400 XXXXXRSNKEETPAG-------------------------EDGEEKAEWQ--NEYLSSFK 3498
+ TP G +D + E Q NEYLSSFK
Sbjct: 1269 LAAGAKKKHGGTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFK 1328
Query: 3499 VASY 3510
VA Y
Sbjct: 1329 VAQY 1332
Score = 243 bits (620), Expect = 4e-62
Identities = 122/220 (55%), Positives = 150/220 (67%), Gaps = 6/220 (2%)
Frame = +1
Query: 3589 DPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSKQNQTQXXXXXNES 3768
DPDYWEKLL+HHYEQ +E + LGKGKR+RKQ+NY N + ++ Q + +E
Sbjct: 1400 DPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNY---NDASQEDQEWQDELSDNQSEY 1456
Query: 3769 YRGSDNGDG------LNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAF 3930
GS++ D +PPL+A+V G +E+LGFN RQRKAF
Sbjct: 1457 SIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAF 1516
Query: 3931 YGAVMRWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPR 4110
A+MRWGMPPQD+ S WLVRDLR KSEK FRAY SLFMRHLCEPGADG +TF DGVPR
Sbjct: 1517 LNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPR 1576
Query: 4111 EGLNRQHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEIQDE 4230
EGL+RQHVL RIG++SLVR+KVQEFE NG++S P++ E
Sbjct: 1577 EGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLVPE 1616
Score = 238 bits (607), Expect = 1e-60
Identities = 128/245 (52%), Positives = 164/245 (66%), Gaps = 2/245 (0%)
Frame = +1
Query: 4384 EQNAPVDEPMDTDXXXXXXXXXXXXXXXRAARPSFKFNICDGGFTELHSLWANEEKVA-R 4560
+ A EP +T + + F FNI DGGFTELH+LW NEE+ A
Sbjct: 1808 DPKAEEKEPTETQQNGDREEDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVS 1867
Query: 4561 NGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFNDIINDPRFSVLNEPFKEVGAEATGSDI 4740
+GK YEIW+RRHDYWLLAG+V HGY R+Q DI NDPR+ +LNEPFK + ++
Sbjct: 1868 SGKIYEIWHRRHDYWLLAGIVTHGYARWQ----DIQNDPRYMILNEPFKSEVHKGNYLEM 1923
Query: 4741 KAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQPDNVG-PLAQRFADLENIAESQANIAK 4917
K KF+ RRFKL+EQ+LVIEEQLRRAA+ N P++ L R A++E +AES +++K
Sbjct: 1924 KNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSK 1983
Query: 4918 ESSAGNRNANAVLHKTLVQLDEILSDMKADVSRLPSTFTQLATVTERLNMTERQILSRLT 5097
ES AGN+ ANAVLHK L QL+E+LSDMKADV+RLPS +++ V RL M+ER ILSRLT
Sbjct: 1984 ESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLT 2043
Query: 5098 TKDED 5112
+ D
Sbjct: 2044 NRAGD 2048
Score = 50.8 bits (120), Expect = 4e-04
Identities = 24/93 (25%), Positives = 47/93 (49%)
Frame = +1
Query: 241 TSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKY 420
+S ++ A GL DV++ + E+++ ++N K FS ++P I + NP +SKM + K+
Sbjct: 173 SSGQLMAEWGLDDVDYLFSEDDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKW 232
Query: 421 KEYQDHMAAQGKPVQKQARGSKTPAVSTPVIPP 519
+E+ + +G A + + PP
Sbjct: 233 REFSANNPFKGSSAAAAAAAVAAAVETVTIAPP 265
>gi|2645435|gb|AAB87384.1| CHD3 [Drosophila melanogaster]
Length = 1518
Score = 1013 bits (2620), Expect = 0.0
Identities = 536/1112 (48%), Positives = 688/1112 (61%), Gaps = 9/1112 (0%)
Frame = +1
Query: 913 PEVVKEEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCET 1092
P+ ++ +++E+CK+C + +LL CDSC +H C+ PPL +PK + W CPRC
Sbjct: 26 PKTNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGD-WICPRC-- 82
Query: 1093 VKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVKWKYLSY 1272
+ K EKIL WRW L+ E + +F+KW +SY
Sbjct: 83 IPLPGKAEKILSWRWA-------LDRSVELRTSKG----------EKRREYFIKWHGMSY 125
Query: 1273 WQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFEESVTSRHHSDNDPYKLRERFYQYGI 1452
W C W+ E + +H ++ + R++D + P S D+ L ERFY+YGI
Sbjct: 126 WHCEWIPEGQMLLHHASMVASFQRRSDMEEP--------SLEELDDQDGNLHERFYRYGI 177
Query: 1453 KPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYWQHRES 1632
KPEW+ + R+INH YLVKW+ELSY+ ++WER+ +I +AI Y + R S
Sbjct: 178 KPEWLLVQRVINHSEEPNGGTMYLVKWRELSYNDSSWERESDSIPGLNQAIALYKKLRSS 237
Query: 1633 KLNEDIPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQPDYVTETGGKLHP 1812
K R+ P YE QP ++ E G KLHP
Sbjct: 238 N--------------KGRQRDRPAPTIDLNKK-----------YEDQPVFLKEAGLKLHP 272
Query: 1813 YQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTII 1992
+Q+EG++WLR+ W G ILADEMGLGKT+Q++ FLYSL KEGHC+GPFLI+ PLST+
Sbjct: 273 FQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLT 332
Query: 1993 NWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVL 2172
NWERE E W P+ Y VTYVG + AR V+R+HE SF E ++ + KF+V+
Sbjct: 333 NWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKT-----MRENQTQYKFNVM 387
Query: 2173 LTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPXXXX 2352
LTSYE I++D L I+W ALVVDEAHRL++NQS FF+ L++Y I Y++LLTGTP
Sbjct: 388 LTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNN 447
Query: 2353 XXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPS 2532
S +FN L+ F AEF ++SKE+Q+++LH +L PHMLRRLKADVL MP
Sbjct: 448 LEELFHLLNFLSSGKFNDLQTFQAEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPP 507
Query: 2533 KSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKA 2712
KSE IVRVELS+MQKK+YK+ILT+NF ALN K GG SL+N++M+L+KCCNHPYLF A
Sbjct: 508 KSEFIVRVELSSMQKKFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSA 567
Query: 2713 ELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEY 2892
EA +G+YE ++L K SGK LL KML++LK HRVL+FSQMT+ML+I+E E
Sbjct: 568 AEEATISPSGLYEMSSLTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNILEHFLEG 627
Query: 2893 EGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDW 3072
EGY+Y+RIDGSI G +RQ AIDR+N P ++ F+FLLSTRAGGLGINLATADTVII+DSDW
Sbjct: 628 EGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDW 687
Query: 3073 NPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEG 3252
NPHND+QAFSRAHR+GQK KVMIYRFVT SVEE+I VAK KM+L HLVVR G+GG
Sbjct: 688 NPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVVRPGMGGMT- 746
Query: 3253 KTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXXXXXXXXXRSNKEE 3432
SK EL+D+LR+GTE+LF K ++ I + R+N+
Sbjct: 747 TNFSKDELEDILRFGTEDLF--------------KDGKSEAIHYDDKAVADLLDRTNR-- 790
Query: 3433 TPAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXXXXXXPDPDYWEKL 3612
EEK W NEYLSSFKVASY DP YW KL
Sbjct: 791 -----GIEEKESWANEYLSSFKVASY-----ATKEEEEEEETEIIKQDAENSDPAYWVKL 840
Query: 3613 LKHHYEQDREIELQKLGKGKRVRKQINYASENM---GTDWSKQNQTQXXXXXNESYRGSD 3783
L+HHYEQ +E + LGKGKRVRKQ+NY + T N N Y
Sbjct: 841 LRHHYEQHQEDVGRSLGKGKRVRKQVNYTDGGVVAADTTRDDSNWQDNGSEYNSEYSAGS 900
Query: 3784 NGDGLN------SXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAFYGAVM 3945
+ DG + + +PPL+A+V G +E+LGFN RQRK+F A+M
Sbjct: 901 DEDGGDDDFDDQNGAERKAKRRLERRDDRPLPPLLARVGGNIEVLGFNARQRKSFLNAIM 960
Query: 3946 RWGMPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNR 4125
R+GMPPQD+ SQWLVRDLR KSE+ F+AY SLFMRHLCEPGAD +TF DGVPREGL+R
Sbjct: 961 RYGMPPQDAFNSQWLVRDLRGKSERNFKAYVSLFMRHLCEPGADNAETFADGVPREGLSR 1020
Query: 4126 QHVLGRIGLLSLVRRKVQEFEQYNGQWSMPEI 4221
QHVL RIG++SL+R+KVQEFE NG +SMPE+
Sbjct: 1021 QHVLTRIGVMSLIRKKVQEFEHINGYYSMPEL 1052
Score = 243 bits (621), Expect = 3e-62
Identities = 125/204 (61%), Positives = 155/204 (75%), Gaps = 1/204 (0%)
Frame = +1
Query: 4486 FKFNICDGGFTELHSLWANEEKVARNGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFNDI 4665
F FNI DGGFTELH+LW NEEK A G+EYEIW+RRHDYWLLAG+V HGYGR+Q DI
Sbjct: 1263 FMFNIADGGFTELHTLWLNEEKAAVPGREYEIWHRRHDYWLLAGIVTHGYGRWQ----DI 1318
Query: 4666 INDPRFSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQPD 4845
ND RF+++NEPFK + +IK KF+ RRFKL+EQ+LVIEEQLRRAA+ N P
Sbjct: 1319 QNDIRFAIINEPFKMDVGKGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNLAQDPS 1378
Query: 4846 NVG-PLAQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMKADVSRLP 5022
+ L RFA++E +AES +++KES AGN+ ANAVLHK L QL+E+LSDMK+DVSRLP
Sbjct: 1379 HPAMSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSRLP 1438
Query: 5023 STFTQLATVTERLNMTERQILSRL 5094
+T ++ V +RL M+ER ILSRL
Sbjct: 1439 ATLARIPPVAQRLQMSERSILSRL 1462
Score = 60.1 bits (144), Expect = 6e-07
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCI 903
+ +YC+ C G+LL CD+CP YH C+ ++ P+GDW C CI
Sbjct: 37 DEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRCI 83
>gi|47206539|emb|CAF92235.1| unnamed protein product [Tetraodon
nigroviridis]
Length = 993
Score = 999 bits (2584), Expect = 0.0
Identities = 534/1021 (52%), Positives = 652/1021 (63%), Gaps = 39/1021 (3%)
Frame = +1
Query: 952 EFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVKPEHKIEKILCW 1131
EFC++CK+ LL CD+C S+H +C++PPL E+P E W CPRC + K++KIL W
Sbjct: 2 EFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGE-WLCPRCMCPPLKGKVQKILHW 60
Query: 1132 RWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVKWKYLSYWQCSWVSEMLLEV 1311
W+E P P L G + +D + FFVKW LSYW CSWVSE+ LE+
Sbjct: 61 MWREPPLPAELPDG---NPNDPL--TKAPLKGRPQREFFVKWAGLSYWHCSWVSELQLEL 115
Query: 1312 HFRMLILLYWRKNDSDAPPEF-----EESVTSRHHSDNDPY--KLRERFYQYGIKPEWMQ 1470
+ ++ Y RKND D PP + EE + S DP + ERFY+YGIKPEWM
Sbjct: 116 YHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRKSIDPQYAMMEERFYRYGIKPEWMV 175
Query: 1471 IHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYWQHRESKLNEDI 1650
IHRI+NH YL+KW+++ YDQ TWE + I +Y+ YW HRE L ED
Sbjct: 176 IHRILNHSLDKDGDVHYLIKWRDMPYDQCTWEMERFAIPDYDRHQACYWDHREQILGEDQ 235
Query: 1651 -PKNVQ--KMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQPDYVTETGGKLHPYQL 1821
P V K + + + +PP +E QP Y+ TGG LHPYQL
Sbjct: 236 RPLMVLEGKTLKERYPKREVPPDAPIIDPTIK--------FEHQPWYINATGGTLHPYQL 287
Query: 1822 EGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWE 2001
EGLNWLR W+ GTD ILADEMGLGKTVQ++ FLYSL KEGH KGPFL++APLSTIINWE
Sbjct: 288 EGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWE 347
Query: 2002 REAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLTS 2181
RE E W PDFYVVTY G +D+R ++RE+EF+F + AV+SG K +MK +KFH+LLTS
Sbjct: 348 REFEMWAPDFYVVTYTGDKDSRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHILLTS 407
Query: 2182 YETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPXXXXXXX 2361
YE I +D+ IL S+ W LVVDEAHRLKNNQS FF+ LN Y I+Y++LLTGTP
Sbjct: 408 YELITIDQAILGSVTWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEE 467
Query: 2362 XXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKSE 2541
+ ERFN LE F EF +ISKEDQI+KLH+LLGPHMLRRLKADV MP+K+E
Sbjct: 468 LFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTE 527
Query: 2542 LIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKAEL- 2718
LIVRVELS MQKK+YK ILTRNF+ALN K GG Q+SL+N++M+LKKCCNHPYLF A +
Sbjct: 528 LIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVV 587
Query: 2719 ----------------------EAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHR 2832
EAP NG Y+G L+K+SGK LLQKML+KLKD GHR
Sbjct: 588 RTSCPPLSFHQKHTSAYHVPFQEAPVLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHR 647
Query: 2833 VLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRA 3012
VLIFSQMT+MLD++ED E+EGY+YERIDG I G +RQ+AIDR+NAPGAQQF FLLSTRA
Sbjct: 648 VLIFSQMTKMLDLLEDFLEFEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRA 707
Query: 3013 GGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVA 3192
GGLGINLA+ADTVIIYDSDWNPHNDIQAFSRAHR+GQ KVMIYRFVT+ SVEE+IT VA
Sbjct: 708 GGLGINLASADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRGSVEERITQVA 767
Query: 3193 KKKMLLNHLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQ 3372
K+KM+L HLVVR GLG K G +MSK ELDD+L++GTEELF ++++AA G K G
Sbjct: 768 KRKMMLTHLVVRPGLGSKTG-SMSKQELDDILKFGTEELFKDEMEAARAVGDNKDGEEGN 826
Query: 3373 EIVWXXXXXXXXXXRSNKEETPAGEDGEEKAEWQ--NEYLSSFKVASYQXXXXXXXXXXX 3546
I + RS +D E E Q NEYLSSFKVA Y
Sbjct: 827 VIHYDDDAISKLLDRS--------QDATEDTEIQNMNEYLSSFKVAQY----VVKEEEGE 874
Query: 3547 XXXXXXXXXXXXXPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWS 3726
DPDYWEKLL+HHYEQ +E + LGKGKRVRKQ+NY N T
Sbjct: 875 EEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNY---NDATQED 931
Query: 3727 KQNQTQXXXXXNESYRGSDNGD----GLNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQVE 3894
++ Q +E GS++ D +PPL+A+V G +E
Sbjct: 932 QEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRHSRRQLKNDKDKPLPPLLARVGGSIE 991
Query: 3895 I 3897
+
Sbjct: 992 V 992
>gi|34533780|dbj|BAC86802.1| unnamed protein product [Homo sapiens]
Length = 1225
Score = 939 bits (2427), Expect = 0.0
Identities = 468/811 (57%), Positives = 563/811 (68%), Gaps = 24/811 (2%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVKEEPAK 942
+ DYCE C+Q GE++LCDTCPRAYH VC+D +E+ PEG WSC HC + G ++ EP
Sbjct: 342 HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEG---IQWEPKD 398
Query: 943 QNDE---------------FCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSC 1077
+DE FC++CK+ LL CD+C S+H +C++PPL E+P E W C
Sbjct: 399 DDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGE-WLC 457
Query: 1078 PRCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVKW 1257
PRC + K+++IL WRW E P P G + L FFVKW
Sbjct: 458 PRCTCPPLKGKVQRILHWRWTEPP--APFMVGLPGPDVEPSLPPPKPLEGIPEREFFVKW 515
Query: 1258 KYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFE-----ESVTSRHHSDNDPY- 1419
LSYW CSWV E+ LE++ ++ Y RKND D PP F+ E S + DP
Sbjct: 516 AGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLY 575
Query: 1420 -KLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYE 1596
K+ ERFY+YGIKPEWM IHRI+NH K YL+KWK+L YDQ TWE DD +I Y+
Sbjct: 576 AKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYD 635
Query: 1597 EAIIKYWQHRESKLNED--IPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEV 1770
YW HRE L ED +PK + K K R+ K P ++
Sbjct: 636 NLKQAYWGHRELMLGEDTGLPKRLLKKGKKLRDDKQEKPPDTPIVDPTVK-------FDK 688
Query: 1771 QPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHC 1950
QP Y+ TGG LHPYQLEGLNWLR W+ GTD ILADEMGLGKTVQ++ FLYSL KEGH
Sbjct: 689 QPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHS 748
Query: 1951 KGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKA 2130
KGP+L++APLSTIINWERE E W PDFYVVTY G +++R V+RE+EFSF + A+RSG K
Sbjct: 749 KGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKV 808
Query: 2131 SKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTI 2310
+MK +KFHVLLTSYE I +D+ IL SIEW LVVDEAHRLKNNQS FF+ LN Y I
Sbjct: 809 FRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI 868
Query: 2311 HYRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHM 2490
Y++LLTGTP + ERFN LE F EF +ISKEDQI+KLH+LLGPHM
Sbjct: 869 DYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHM 928
Query: 2491 LRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLME 2670
LRRLKADV MP+K+ELIVRVELS MQKK+YK ILTRNF+ALN K GG Q+SL+N++M+
Sbjct: 929 LRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMD 988
Query: 2671 LKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQ 2850
LKKCCNHPYLF A +EAP NG Y+G++L+K+SGK +LLQKML+KL+D GHRVLIFSQ
Sbjct: 989 LKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQ 1048
Query: 2851 MTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGIN 3030
MT+MLD++ED EYEGY+YERIDG I G +RQ+AIDR+NAPGAQQF FLLSTRAGGLGIN
Sbjct: 1049 MTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGIN 1108
Query: 3031 LATADTVIIYDSDWNPHNDIQAFSRAHRLGQ 3123
LATADTVIIYDSDWNPHNDIQAFSRAHR+GQ
Sbjct: 1109 LATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 1139
Score = 51.6 bits (122), Expect = 2e-04
Identities = 25/93 (26%), Positives = 47/93 (49%)
Frame = +1
Query: 241 TSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKY 420
+S ++ A GL DV++ + EE++ ++N K FS ++P I + NP +SKM + K+
Sbjct: 133 SSGQLMAEWGLDDVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKW 192
Query: 421 KEYQDHMAAQGKPVQKQARGSKTPAVSTPVIPP 519
+E+ + +G A + + PP
Sbjct: 193 REFSANNPFKGSSAAAAAAAVAAAVETVTISPP 225
>gi|50729410|ref|XP_416503.1| PREDICTED: similar to Chromodomain
helicase DNA binding protein 4 [Gallus gallus]
Length = 2761
Score = 827 bits (2136), Expect = 0.0
Identities = 410/763 (53%), Positives = 517/763 (67%), Gaps = 27/763 (3%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHG---------- 912
+ DYCE C+Q GE++LCDTCPRAYH VC+D +ME+ PEG WSC HC + G
Sbjct: 657 HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNS 716
Query: 913 --PEVVK------EEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEET 1068
E+++ EE + EFC +CK+ LL CD+C S+H +C++PPL E+P E
Sbjct: 717 EGEEILEDVVGDAEEEDDHHMEFCXVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNGE- 775
Query: 1069 WSCPRCETVKPEHKIEKILCWRWKEIPY----PEPLEAGKEASSDDAMLXXXXXXXXXXX 1236
W CPRC + K++KIL W+W + P P P +A A +
Sbjct: 776 WLCPRCTCPALKGKVQKILIWKWGQPPVGPVPPRPPDADPNAPPPKPL-------EGRPE 828
Query: 1237 XXFFVKWKYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFE---ESVTSRHHSD 1407
FFVKW+ +SYW CSWVSE+ LE+H +++ Y RKND D PP + E SR +
Sbjct: 829 RQFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGEEEKSRKRKN 888
Query: 1408 NDPY--KLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSN 1581
DP ++ RFY+YGIKPEWM IHRI+NH K YL+KW++L YDQA+WE +D +
Sbjct: 889 KDPKYAEMEGRFYRYGIKPEWMMIHRILNHSVDKKGNVHYLIKWRDLPYDQASWESEDVD 948
Query: 1582 IANYEEAIIKYWQHRESKLNEDIPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXX 1761
I +Y+ YW HRE E+ + K R+ + P
Sbjct: 949 IQDYDLYKQAYWNHRELMRGEEGRPGKKLKKVKMRKLERPPETPTVDPTVK--------- 999
Query: 1762 YEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKE 1941
Y+ QP+Y+ TGG LHPYQLEGLNWLR W+ GTD ILADEMGLGKTVQ+ FLYSL KE
Sbjct: 1000 YDRQPEYLDVTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKE 1059
Query: 1942 GHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSG 2121
GH KGPFL++APLSTIINWERE E W PD YVVTYVG +D+R ++RE+EF+F + A+R G
Sbjct: 1060 GHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRGG 1119
Query: 2122 PKASKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNE 2301
KAS+MK +KFHVLLTSYE I +D IL SI+W L+VDEAHRLKNNQS FF+ LN
Sbjct: 1120 KKASRMKKEAAVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNG 1179
Query: 2302 YTIHYRVLLTGTPXXXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLG 2481
Y++ +++LLTGTP + ERF+ LE F EF +I+KEDQI+KLH++LG
Sbjct: 1180 YSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLG 1239
Query: 2482 PHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNV 2661
PHMLRRLKADV MPSK+ELIVRVELS MQKK+YK ILTRNF+ALN + GG Q+SL+NV
Sbjct: 1240 PHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNV 1299
Query: 2662 LMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLI 2841
+M+LKKCCNHPYLF A +EAPK NGMY+G+ALI+ SGK +LLQKML+ LK+GGHRVLI
Sbjct: 1300 VMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1359
Query: 2842 FSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNA 2970
FSQMT+MLD++ED E+EGY+YERIDG I G MRQ+AIDR+NA
Sbjct: 1360 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNA 1402
Score = 283 bits (723), Expect = 4e-74
Identities = 160/331 (48%), Positives = 199/331 (59%), Gaps = 7/331 (2%)
Frame = +1
Query: 3256 TMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXXXXXXXXXRSNKEET 3435
T S ELDD+L++GTEELF ++ A EG G K+G + I + R N++ET
Sbjct: 2029 TASLQELDDILKFGTEELFKDE--ATEG-GDNKEGEDSSVIHYDDKAIERLLDR-NQDET 2084
Query: 3436 PAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXXXXXXPDPDYWEKLL 3615
ED E + NEYLSSFKVA Y DPDYWEKLL
Sbjct: 2085 ---EDTE--LQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESV--DPDYWEKLL 2137
Query: 3616 KHHYEQDREIELQKLGKGKRVRKQINYASENM-GTDWSKQNQTQXXXXXNESYRGSDNGD 3792
+HHYEQ +E + LGKGKR+RKQ+NY + DW S G ++ D
Sbjct: 2138 RHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDEDFD 2197
Query: 3793 G------LNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAFYGAVMRWG 3954
L+S +PPL+A+V G +E+LGFN RQRKAF A+MR+G
Sbjct: 2198 ERSEAAFLSSAARRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYG 2257
Query: 3955 MPPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNRQHV 4134
MPPQD+ +QWLVRDLR KSEK F+AY SLFMRHLCEPGADG +TF DGVPREGL+RQHV
Sbjct: 2258 MPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV 2317
Query: 4135 LGRIGLLSLVRRKVQEFEQYNGQWSMPEIQD 4227
L RIG++SL+R+KVQEFE NG+WSMPE+ +
Sbjct: 2318 LTRIGVMSLIRKKVQEFEHVNGRWSMPELAE 2348
Score = 244 bits (624), Expect = 1e-62
Identities = 132/230 (57%), Positives = 162/230 (70%), Gaps = 2/230 (0%)
Frame = +1
Query: 4468 RAARPSFKFNICDGGFTELHSLWANEEKVAR-NGKEYEIWYRRHDYWLLAGVVVHGYGRF 4644
+A + F FNI DGGFTELHSLW NEE+ A K YEIW+RRHDYWLLAG++ HGY R+
Sbjct: 2522 KAVKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIINHGYARW 2581
Query: 4645 QANFNDIINDPRFSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHA 4824
Q DI NDPR+++LNEPFK +IK KF+ RRFKL+EQ+LVIEEQLRRAA+
Sbjct: 2582 Q----DIQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYL 2637
Query: 4825 NRHLQPDNVG-PLAQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMK 5001
N P + L RFA++E +AES +++KES AGN+ ANAVLHK L QL+E+LSDMK
Sbjct: 2638 NMSEDPTHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMK 2697
Query: 5002 ADVSRLPSTFTQLATVTERLNMTERQILSRLTTKDEDAIANRSVLPPPGP 5151
ADV+RLP+T ++ V RL M+ER ILSRL ANRS PPP P
Sbjct: 2698 ADVTRLPATIARIPPVAVRLQMSERNILSRL--------ANRSSEPPPPP 2739
>gi|24666729|ref|NP_649111.1| CG9594-PA [Drosophila melanogaster]
gi|25089877|sp|O16102|CHD3_DROME Chromodomain helicase-DNA-binding
protein 3
gi|23093148|gb|AAF49162.2| CG9594-PA [Drosophila melanogaster]
Length = 892
Score = 815 bits (2105), Expect = 0.0
Identities = 434/942 (46%), Positives = 574/942 (60%), Gaps = 11/942 (1%)
Frame = +1
Query: 913 PEVVKEEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCET 1092
P+ ++ +++E+CK+C + +LL CDSC +H C+ PPL +PK + W CPRC
Sbjct: 23 PKTNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGD-WICPRC-- 79
Query: 1093 VKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVKWKYLSY 1272
+ K EKIL WRW L+ E + +F+KW +SY
Sbjct: 80 IPLPGKAEKILSWRWA-------LDRSVELRTSKG----------EKRREYFIKWHGMSY 122
Query: 1273 WQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFEESVTSRHHSDNDPYKLRERFYQYGI 1452
W C W+ E + +H ++ + R++D + P S D+ L ERFY+YGI
Sbjct: 123 WHCEWIPEGQMLLHHASMVASFQRRSDMEEP--------SLEELDDQDGNLHERFYRYGI 174
Query: 1453 KPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYWQHRES 1632
KPEW+ + R+INH YLVKW+ELSY+ ++WER+ +I +AI Y + R S
Sbjct: 175 KPEWLLVQRVINHSEEPNGGTMYLVKWRELSYNDSSWERESDSIPGLNQAIALYKKLRSS 234
Query: 1633 KLNEDIPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQPDYVTETGGKLHP 1812
K R+ P YE QP ++ E G KLHP
Sbjct: 235 N--------------KGRQRDRPAPTIDLNKK-----------YEDQPVFLKEAGLKLHP 269
Query: 1813 YQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTII 1992
+Q+EG++WLR+ W G ILADEMGLGKT+Q++ FLYSL KEGHC+GPFLI+ PLST+
Sbjct: 270 FQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLT 329
Query: 1993 NWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVL 2172
NWERE E W P+ Y VTYVG + AR V+R+HE SF E ++ + KF+V+
Sbjct: 330 NWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKT-----MRENQTQYKFNVM 384
Query: 2173 LTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPXXXX 2352
LTSYE I++D L I+W ALVVDEAHRL++NQS FF+ L++Y I Y++LLTGTP
Sbjct: 385 LTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNN 444
Query: 2353 XXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPS 2532
S +FN L+ F AEF ++SKE+Q+++LH +L PHMLRRLKADVL MP
Sbjct: 445 LEELFHLLNFLSSGKFNDLQTFQAEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPP 504
Query: 2533 KSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKA 2712
KSE IVRVELS+MQKK+YK+ILT+NF ALN K GG SL+N++M+L+KCCNHPYLF A
Sbjct: 505 KSEFIVRVELSSMQKKFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSA 564
Query: 2713 ELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEY 2892
EA +G+YE ++L K SGK LL KML++LK HRVL+FSQMT+ML+++E E
Sbjct: 565 AEEATISPSGLYEMSSLTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEG 624
Query: 2893 EGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDW 3072
EGY+Y+RIDGSI G +RQ AIDR+N P ++ F+FLLSTRAGGLGINLATADTVII+DSDW
Sbjct: 625 EGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDW 684
Query: 3073 NPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEG 3252
NPHND+QAFSRAHR+GQK KVMIYRFVT SVEE+I VAK KM+L HLVVR G+GG
Sbjct: 685 NPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVVRPGMGGMT- 743
Query: 3253 KTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXXXXXXXXXRSNKEE 3432
SK EL+D+LR+GTE+LF K ++ I + R+N+
Sbjct: 744 TNFSKDELEDILRFGTEDLF--------------KDGKSEAIHYDDKAVADLLDRTNR-- 787
Query: 3433 TPAGEDGEEKAEWQNEYLSSFKVASYQXXXXXXXXXXXXXXXXXXXXXXXXPDPDYWEKL 3612
EEK W NEYLSSFKVASY DP YWE L
Sbjct: 788 -----GIEEKESWANEYLSSFKVASY-------ATKEDHEEHDDYNNDAENTDPFYWENL 835
Query: 3613 L----------KHHYEQDREIELQK-LGKGKRVRKQINYASE 3705
+ + Q +++++ +GKGKR+RK+I+Y+++
Sbjct: 836 MGKSQPKLPKKQKKQSQQSQVDVESIMGKGKRIRKEIDYSNQ 877
Score = 60.1 bits (144), Expect = 6e-07
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +1
Query: 763 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCI 903
+ +YC+ C G+LL CD+CP YH C+ ++ P+GDW C CI
Sbjct: 34 DEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRCI 80
>gi|18400745|ref|NP_565587.1| chromatin remodeling factor CHD3
(PICKLE) [Arabidopsis thaliana]
gi|25453560|pir||T52301 GYMNOS/PICKLE protein [imported] -
Arabidopsis thaliana
gi|6318930|gb|AAF07084.1| GYMNOS/PICKLE [Arabidopsis thaliana]
gi|6478518|gb|AAF13875.1| chromatin remodeling factor CHD3
[Arabidopsis thaliana]
Length = 1384
Score = 672 bits (1734), Expect = 0.0
Identities = 418/1106 (37%), Positives = 593/1106 (52%), Gaps = 6/1106 (0%)
Frame = +1
Query: 916 EVVKEEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETV 1095
E + AK+N C+ C E+ NL+ C++C +FHA C+ PPL + E W CP C V
Sbjct: 40 EAIVRTDAKENA--CQACGESTNLVSCNTCTYAFHAKCLVPPLKDA-SVENWRCPEC--V 94
Query: 1096 KPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLXXXXXXXXXXXXXFFVKWKYLSYW 1275
P ++I+KIL + P ++ ++ SSD + VKWK LSY
Sbjct: 95 SPLNEIDKILDCEMR------PTKSSEQGSSD-------AEPKPIFVKQYLVKWKGLSYL 141
Query: 1276 QCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFEESVTSRHHSDNDPYKLRERFYQYGIK 1455
CSWV E + ++ L R N+ F + S ++S++D I+
Sbjct: 142 HCSWVPEKEFQKAYKSNHRLKTRVNN------FHRQMESFNNSEDD---------FVAIR 186
Query: 1456 PEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYWQHRESK 1635
PEW + RI+ + + +YLVK+KELSYD+ WE +S+I+ ++ I ++
Sbjct: 187 PEWTTVDRILACRE-EDGELEYLVKYKELSYDECYWE-SESDISTFQNEIQRF------- 237
Query: 1636 LNEDIPKNVQKMIAKHREAKGLPPXXXXXXXXXXXXXXXXXXYEVQPDYVTETGGKLHPY 1815
+D+ ++ +K + K P ++ P+++ G LHPY
Sbjct: 238 --KDVNSRTRR--SKDVDHKRNP--------------RDFQQFDHTPEFLK---GLLHPY 276
Query: 1816 QLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIIN 1995
QLEGLN+LR WS T ILADEMGLGKT+QS+ L SL +E P L+ APLST+ N
Sbjct: 277 QLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLI--PHLVIAPLSTLRN 334
Query: 1996 WEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTEN----MKF 2163
WERE W P VV Y G AR V+REHEF + + K S ++E+ +KF
Sbjct: 335 WEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKF 394
Query: 2164 HVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPX 2343
VLLTSYE IN+D +L I+W ++VDE HRLKN S F +L +Y+ ++R+LLTGTP
Sbjct: 395 DVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPL 454
Query: 2344 XXXXXXXXXXXXXXSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRLKADVLTG 2523
+F LE F EF +I++E+QI +LH +L PH+LRR+K DV+
Sbjct: 455 QNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKD 514
Query: 2524 MPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLF 2703
MP K ELI+RV+LS++QK++YK I TRN+ L K GG Q+SL N++MEL+K C HPY+
Sbjct: 515 MPPKKELILRVDLSSLQKEYYKAIFTRNYQVLT-KKGGAQISLNNIMMELRKVCCHPYML 573
Query: 2704 VKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDL 2883
E P + L+++ GK LL KM+ KLK+ GHRVLI++Q MLD++ED
Sbjct: 574 EGVE---PVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDY 630
Query: 2884 CEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYD 3063
C ++ ++YERIDG + G RQ IDR+NA + +F FLLSTRAGGLGINLATADTVIIYD
Sbjct: 631 CTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYD 690
Query: 3064 SDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLGG 3243
SDWNPH D+QA +RAHRLGQ +KVMIYR + + ++EE++ + KKKM+L HLVV G
Sbjct: 691 SDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVV----GK 746
Query: 3244 KEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWXXXXXXXXXXRSN 3423
+ + +++ ELDD++R+G++ELF+ + D A G +I + R
Sbjct: 747 LKTQNINQEELDDIIRYGSKELFASEDDEAGKSG---------KIHYDDAAIDKLLDRDL 797
Query: 3424 KEETPAGEDGEEKAEWQNEYLSSFKVASYQ--XXXXXXXXXXXXXXXXXXXXXXXXPDPD 3597
E D EE +N +L +FKVA+++
Sbjct: 798 VEAEEVSVDDEE----ENGFLKAFKVANFEYIDENEAAALEAQRVAAESKSSAGNSDRAS 853
Query: 3598 YWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSKQNQTQXXXXXNESYRG 3777
YWE+LLK +E + EL LGK KR RKQ+ E+ + ES G
Sbjct: 854 YWEELLKDKFELHQAEELNALGKRKRSRKQLVSIEEDDLAGLEDVSSDGDESYEAESTDG 913
Query: 3778 SDNGDGLNSXXXXXXXXXXXXXXXXXMPPLMAKVNGQVEILGFNPRQRKAFYGAVMRWGM 3957
G G+ + PLM +LGFN QR F +MR+G
Sbjct: 914 EAAGQGVQTGRRPYRRKGRDNLEPT---PLMEGEGRSFRVLGFNQSQRAIFVQTLMRYGA 970
Query: 3958 PPQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNRQHVL 4137
D + V L+ K+ + Y LF++H+ E + TF+DGVP+EGL + VL
Sbjct: 971 GNFDWKE---FVPRLKQKTFEEINEYGILFLKHIAEEIDENSPTFSDGVPKEGLRIEDVL 1027
Query: 4138 GRIGLLSLVRRKVQEFEQYNGQWSMP 4215
RI LL LV+ KV+ E + G+ P
Sbjct: 1028 VRIALLILVQEKVKFVEDHPGKPVFP 1053
Score = 39.7 bits (91), Expect = 0.83
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 775 CEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVK 927
C+ C + L+ C+TC A+H C+ +++ +W C C+ E+ K
Sbjct: 52 CQACGESTNLVSCNTCTYAFHAKCLVPPLKDASVENWRCPECVSPLNEIDK 102