Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F28B1_2
(2922 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17560294|ref|NP_507317.1| putative protein (5R529) [Caenorhab... 2018 0.0
gi|17560292|ref|NP_507316.1| predicted CDS, putative endoplasmic... 477 e-133
gi|17560302|ref|NP_507321.1| serpentine Receptor, class I (sri-6... 372 e-101
gi|17558248|ref|NP_507774.1| predicted CDS, putative protein fam... 281 6e-74
gi|39592678|emb|CAE62292.1| Hypothetical protein CBG06352 [Caeno... 138 9e-31
gi|17558114|ref|NP_507441.1| predicted CDS, putative cytoplasmic... 102 7e-20
gi|17560300|ref|NP_507320.1| predicted CDS, putative cytoplasmic... 97 2e-18
gi|39580987|emb|CAE72957.1| Hypothetical protein CBG20291 [Caeno... 90 3e-16
gi|17560298|ref|NP_507319.1| predicted CDS, putative cytoplasmic... 70 4e-10
gi|17560296|ref|NP_507318.1| predicted CDS, putative cytoplasmic... 67 2e-09
gi|17540698|ref|NP_502477.1| predicted CDS, putative cytoplasmic... 57 3e-06
gi|50657633|gb|AAT79618.1| photosystem II 44 KD apoprotein [Grac... 40 0.32
gi|11465822|ref|NP_053966.1| photosystem II 44 kDa protein [Porp... 38 1.6
gi|227610|prf||1707315B photosystem II CP43 protein 37 2.7
gi|11467391|ref|NP_043248.1| photosystem II 44 kDa protein [Cyan... 37 3.6
gi|11467625|ref|NP_050677.1| photosystem II 44 kDa protein [Guil... 36 6.1
gi|6093810|sp|O78426|PSBC_GUITH Photosystem II 44 kDa reaction c... 36 6.1
>gi|17560294|ref|NP_507317.1| putative protein (5R529) [Caenorhabditis
elegans]
gi|7500024|pir||T21463 hypothetical protein F28B1.2 - Caenorhabditis
elegans
gi|3876439|emb|CAB04209.1| Hypothetical protein F28B1.2
[Caenorhabditis elegans]
Length = 973
Score = 2018 bits (5228), Expect = 0.0
Identities = 961/973 (98%), Positives = 961/973 (98%)
Frame = +1
Query: 1 MRNCKCPAISLLTQEQIRNNVEGKYLGDHQVWEPIVEAQDDCSLQVTCKPVPGVRSFFTV 180
MRNCKCPAISLLTQEQIRNNVEGKYLGDHQVWEPIVEAQDDCSLQVTCKPVPGVRSFFTV
Sbjct: 1 MRNCKCPAISLLTQEQIRNNVEGKYLGDHQVWEPIVEAQDDCSLQVTCKPVPGVRSFFTV 60
Query: 181 MFRSNGPPIYINRVVAEQSTYLKQPRSFDGLSCGAYSGKDQWHFILDPIRDLSLACVADV 360
MFRSNGPPIYINRVVAEQSTYLKQPRSFDGLSCGAYSGKDQWHFILDPIRDLSLACVADV
Sbjct: 61 MFRSNGPPIYINRVVAEQSTYLKQPRSFDGLSCGAYSGKDQWHFILDPIRDLSLACVADV 120
Query: 361 YSCDCLRVSIDTKSGASSVDRMPSATDQCGFFNATCSEDDYTPFLHSSTSSFIFSQGTRH 540
YSCDCLRVSIDTKSGASSVDRMPSATDQCGFFNATCSEDDYTPFLHSSTSSFIFSQGTRH
Sbjct: 121 YSCDCLRVSIDTKSGASSVDRMPSATDQCGFFNATCSEDDYTPFLHSSTSSFIFSQGTRH 180
Query: 541 FKSVSYEDLLCVKEKETFDWYFGNLKLGDASITCKPHTDNKLYYTCGMFKSIRKLGSITW 720
FKSVSYEDLLCVKEKETFDWYFGNLKLGDASITCKPHTDNKLYYTCGMFKSIRKLGSITW
Sbjct: 181 FKSVSYEDLLCVKEKETFDWYFGNLKLGDASITCKPHTDNKLYYTCGMFKSIRKLGSITW 240
Query: 721 DPSWEFFMFCEDGHKPVVFSENNPPIEVNYMGPIIRCINKPLNPYIYYWVANGIQLINPA 900
DPSWEFFMFCEDGHKPVVFSENNPPIEVNYMGPIIRCINKPLNPYIYYWVANGIQLINPA
Sbjct: 241 DPSWEFFMFCEDGHKPVVFSENNPPIEVNYMGPIIRCINKPLNPYIYYWVANGIQLINPA 300
Query: 901 GACVKYSEPVEMQKCKCNVKLFXXXXXXXXXXXXYFYYNTVWQPIVKTNDDCLLSITCRP 1080
GACVKYSEPVEMQKCKCNVKLF YFYYNTVWQPIVKTNDDCLLSITCRP
Sbjct: 301 GACVKYSEPVEMQKCKCNVKLFNKKNVQNNVGGNYFYYNTVWQPIVKTNDDCLLSITCRP 360
Query: 1081 MSGISSFLTVLFRSNGPPIYINRVVANQSTFVEQPRAIGDMECREHGETNEWFFHGELVK 1260
MSGISSFLTVLFRSNGPPIYINRVVANQSTFVEQPRAIGDMECREHGETNEWFFHGELVK
Sbjct: 361 MSGISSFLTVLFRSNGPPIYINRVVANQSTFVEQPRAIGDMECREHGETNEWFFHGELVK 420
Query: 1261 DFALACISDVNSCNCPQIEIDKDSGVIVEDRMPSAIDQCGFFRASCSASGHEPFLYSTST 1440
DFALACISDVNSCNCPQIEIDKDSGVIVEDRMPSAIDQCGFFRASCSASGHEPFLYSTST
Sbjct: 421 DFALACISDVNSCNCPQIEIDKDSGVIVEDRMPSAIDQCGFFRASCSASGHEPFLYSTST 480
Query: 1441 SPIFSGPGTDHSSITYRLYDDLICLRGPISWYFGFGNMRLENATIKCNTNRDVYNEDALS 1620
SPIFSGPGTDHSSITYRLYDDLICLRGPISWYFGFGNMRLENATIKCNTNRDVYNEDALS
Sbjct: 481 SPIFSGPGTDHSSITYRLYDDLICLRGPISWYFGFGNMRLENATIKCNTNRDVYNEDALS 540
Query: 1621 VCGVFKVINSLDDFGKYHKIGDYAQAQIETSSWTPSDEFQMNCEFGEKAVVFSENNQPIE 1800
VCGVFKVINSLDDFGKYHKIGDYAQAQIETSSWTPSDEFQMNCEFGEKAVVFSENNQPIE
Sbjct: 541 VCGVFKVINSLDDFGKYHKIGDYAQAQIETSSWTPSDEFQMNCEFGEKAVVFSENNQPIE 600
Query: 1801 ISDPAQLVKCAYNPLSNFASMWVVKGVRLINPAGACIRQKANMTDCKCPTVNFLTQNNIQ 1980
ISDPAQLVKCAYNPLSNFASMWVVKGVRLINPAGACIRQKANMTDCKCPTVNFLTQNNIQ
Sbjct: 601 ISDPAQLVKCAYNPLSNFASMWVVKGVRLINPAGACIRQKANMTDCKCPTVNFLTQNNIQ 660
Query: 1981 NNEGGKYLKDHQVWDPVIEAVDCFIKIKCNPINGVSSFFTMLFRSNGPPVYINRVVANQS 2160
NNEGGKYLKDHQVWDPVIEAVDCFIKIKCNPINGVSSFFTMLFRSNGPPVYINRVVANQS
Sbjct: 661 NNEGGKYLKDHQVWDPVIEAVDCFIKIKCNPINGVSSFFTMLFRSNGPPVYINRVVANQS 720
Query: 2161 TFVEQPRSIGDFGCKEHNGGHAWFFHEAVVKDLSFACVADSHSCDCPRIEVDTDSGVIVE 2340
TFVEQPRSIGDFGCKEHNGGHAWFFHEAVVKDLSFACVADSHSCDCPRIEVDTDSGVIVE
Sbjct: 721 TFVEQPRSIGDFGCKEHNGGHAWFFHEAVVKDLSFACVADSHSCDCPRIEVDTDSGVIVE 780
Query: 2341 NRMSSATDQCDFIDATCSASDRKPFLYSTTTHQIYSGTGKTYYESETVRYEDLLCVRGEL 2520
NRMSSATDQCDFIDATCSASDRKPFLYSTTTHQIYSGTGKTYYESETVRYEDLLCVRGEL
Sbjct: 781 NRMSSATDQCDFIDATCSASDRKPFLYSTTTHQIYSGTGKTYYESETVRYEDLLCVRGEL 840
Query: 2521 KWYIGNLKLENLVIKCITDVEVYNEEASTSCGVFKVVTSLEDYHVIGVYSQVQLGINLWT 2700
KWYIGNLKLENLVIKCITDVEVYNEEASTSCGVFKVVTSLEDYHVIGVYSQVQLGINLWT
Sbjct: 841 KWYIGNLKLENLVIKCITDVEVYNEEASTSCGVFKVVTSLEDYHVIGVYSQVQLGINLWT 900
Query: 2701 PGNDFQITCEPGFIPVVYSANNQPIEISDPAHRIKCAYSPLSNYASMWVVDGIRVFDPAG 2880
PGNDFQITCEPGFIPVVYSANNQPIEISDPAHRIKCAYSPLSNYASMWVVDGIRVFDPAG
Sbjct: 901 PGNDFQITCEPGFIPVVYSANNQPIEISDPAHRIKCAYSPLSNYASMWVVDGIRVFDPAG 960
Query: 2881 ACIDESRIQKTIS 2919
ACIDESRIQKTIS
Sbjct: 961 ACIDESRIQKTIS 973