Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F28B4_2
(366 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17567357|ref|NP_508549.1| putative nuclear protein (XD826) [C... 248 2e-65
gi|39597701|emb|CAE68392.1| Hypothetical protein CBG14157 [Caeno... 186 7e-47
gi|25144493|ref|NP_492029.2| putative membrane protein (14.7 kD)... 90 9e-18
gi|7506016|pir||T23727 hypothetical protein M05B5.2 - Caenorhabd... 80 1e-14
gi|39582777|emb|CAE74240.1| Hypothetical protein CBG21925 [Caeno... 77 1e-13
gi|46320673|ref|ZP_00221058.1| COG0082: Chorismate synthase [Bur... 34 0.79
gi|46311124|ref|ZP_00211735.1| COG0082: Chorismate synthase [Bur... 33 1.4
gi|48787999|ref|ZP_00283978.1| COG0082: Chorismate synthase [Bur... 33 1.8
gi|33944517|ref|XP_340406.1| fatty acid desaturase, putative [Tr... 32 3.0
gi|50743067|ref|XP_426173.1| PREDICTED: similar to RIKEN cDNA A3... 32 3.9
gi|34551088|gb|AAQ74969.1| oleate desaturase [Trypanosoma brucei] 32 3.9
gi|631018|pir||S22432 hydroxymethylglutaryl-CoA synthase (EC 4.1... 32 3.9
gi|40253242|dbj|BAD05380.1| hypothetical protein [Oryza sativa (... 32 3.9
gi|33592557|ref|NP_880201.1| chorismate synthase [Bordetella per... 32 3.9
gi|33601094|ref|NP_888654.1| chorismate synthase [Bordetella bro... 32 3.9
gi|33596541|ref|NP_884184.1| chorismate synthase [Bordetella par... 32 3.9
gi|25155109|ref|NP_506859.2| speract/scavenger receptor (5P989) ... 28 4.0
gi|7495514|pir||T18995 hypothetical protein C06B8.7 - Caenorhabd... 28 4.0
gi|46132296|ref|ZP_00170749.2| COG0082: Chorismate synthase [Ral... 31 5.1
gi|39589206|emb|CAE57939.1| Hypothetical protein CBG00994 [Caeno... 31 5.1
gi|38234908|ref|NP_940675.1| Putative hydrolase [Corynebacterium... 31 6.7
gi|28273166|tpg|DAA00301.1| TPA: class II basic helix-loop-helix... 31 6.7
gi|39586429|emb|CAE74087.1| Hypothetical protein CBG21743 [Caeno... 30 8.8
gi|49477283|ref|YP_035806.1| conserved hypothetical protein [Bac... 30 8.8
gi|12053181|emb|CAB66771.1| hypothetical protein [Homo sapiens] ... 30 8.8
>gi|17567357|ref|NP_508549.1| putative nuclear protein (XD826)
[Caenorhabditis elegans]
gi|14574144|gb|AAK68352.1| Hypothetical protein F28B4.4
[Caenorhabditis elegans]
Length = 121
Score = 248 bits (633), Expect = 2e-65
Identities = 111/121 (91%), Positives = 111/121 (91%)
Frame = -1
Query: 366 MDSNFMRVLQKRDINWCEGGHGYPASCPGPSDPPYYQYCCTFPYLGFYKPSCCMFPIHDG 187
MDSNFMRVLQKRDINWCEGGHGYPASCPGPSDPPYYQYCCTFPYLGFYKPSCCMFPIHDG
Sbjct: 1 MDSNFMRVLQKRDINWCEGGHGYPASCPGPSDPPYYQYCCTFPYLGFYKPSCCMFPIHDG 60
Query: 186 VLVISCLSCIIIFTLLLGLYCWCWPTSLLNXXXXXXXXXXTISQDEMFPRRNSYKSSIPF 7
VLVISCLSCIIIFTLLLGLYCWCWPTSLLN TISQDEMFPRRNSYKSSIPF
Sbjct: 61 VLVISCLSCIIIFTLLLGLYCWCWPTSLLNRRRTRTAPPPTISQDEMFPRRNSYKSSIPF 120
Query: 6 D 4
D
Sbjct: 121 D 121