Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F28C6_8
(2208 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17533541|ref|NP_495825.1| SUppressor of Forked homolog (84.6 ... 1450 0.0
gi|7494555|pir||T37268 cleavage stimulation factor - Caenorhabdi... 1450 0.0
gi|773663|gb|AAB01508.1| similar to C. elegans cleavage stimulat... 1441 0.0
gi|39587101|emb|CAE57568.1| Hypothetical protein CBG00546 [Caeno... 1225 0.0
gi|21704042|ref|NP_663504.1| cleavage stimulation factor, 3' pre... 683 0.0
gi|50416209|gb|AAH77522.1| Unknown (protein for MGC:83109) [Xeno... 683 0.0
gi|4557495|ref|NP_001317.1| cleavage stimulation factor subunit ... 682 0.0
gi|15131402|emb|CAC48252.1| dJ85M6.1 (cleavage stimulation facto... 682 0.0
gi|50741938|ref|XP_419632.1| PREDICTED: similar to cleavage stim... 682 0.0
gi|45361053|ref|NP_989162.1| hypothetical protein MGC76035 [Xeno... 680 0.0
gi|47085767|ref|NP_998218.1| zgc:56028 [Danio rerio] >gnl|BL_ORD... 671 0.0
gi|48097725|ref|XP_393870.1| similar to ENSANGP00000017604 [Apis... 663 0.0
gi|31205813|ref|XP_311858.1| ENSANGP00000017604 [Anopheles gambi... 640 0.0
gi|47550839|ref|NP_999884.1| cleavage stimulation factor, 3' pre... 639 0.0
gi|4092534|gb|AAC99436.1| suppressor of forked protein; Su(f) pr... 635 0.0
gi|47218738|emb|CAG05710.1| unnamed protein product [Tetraodon n... 635 e-180
gi|135031|sp|P25991|SUF_DROME Suppressor of forked protein >gnl|... 634 e-180
gi|34856609|ref|XP_342478.1| similar to Cleavage stimulation fac... 624 e-177
gi|37719566|gb|AAR01873.1| suppressor of forked [Drosophila subo... 620 e-176
gi|30923724|gb|EAA46201.1| CG17170-PB.3 [Drosophila melanogaster] 618 e-175
gi|22329636|ref|NP_173218.2| suppressor of forked protein family... 352 2e-95
gi|21591637|gb|AAM64166.1| cleavage stimulation factor 77 [Arabi... 352 2e-95
gi|47058871|gb|AAT09321.1| SD14665p [Drosophila melanogaster] 345 3e-93
gi|422427|pir||B46389 gene su(f) protein, 42K splice form - frui... 330 7e-89
gi|30923723|gb|EAA46200.1| CG17170-PC.3 [Drosophila melanogaster] 330 7e-89
gi|20976836|gb|AAM27493.1| GH16848p [Drosophila melanogaster] 330 7e-89
gi|25518635|pir||F86312 hypothetical protein F11A6.10 [imported]... 288 3e-76
gi|19114215|ref|NP_593303.1| putative mrna 3'-end processing pro... 270 8e-71
gi|50551041|ref|XP_502994.1| hypothetical protein [Yarrowia lipo... 267 9e-70
gi|30923722|gb|EAA46199.1| CG17170-PA.3 [Drosophila melanogaster] 229 2e-58
gi|49070762|ref|XP_399670.1| hypothetical protein UM02055.1 [Ust... 200 1e-49
gi|46105442|ref|XP_380525.1| hypothetical protein FG00349.1 [Gib... 198 5e-49
gi|32423379|ref|XP_332127.1| hypothetical protein [Neurospora cr... 191 6e-47
gi|6323706|ref|NP_013777.1| Cleavage and polyadenylation factor ... 191 8e-47
gi|50287639|ref|XP_446249.1| unnamed protein product [Candida gl... 187 9e-46
gi|49095136|ref|XP_409029.1| hypothetical protein AN4892.2 [Aspe... 182 4e-44
gi|45188010|ref|NP_984233.1| ADR137Wp [Eremothecium gossypii] >g... 175 4e-42
gi|38105216|gb|EAA51670.1| hypothetical protein MG03265.4 [Magna... 175 5e-42
gi|46444560|gb|EAL03834.1| hypothetical protein CaO19.1531 [Cand... 166 3e-39
gi|46444412|gb|EAL03687.1| hypothetical protein CaO19.9106 [Cand... 164 6e-39
gi|50312435|ref|XP_456251.1| unnamed protein product [Kluyveromy... 164 8e-39
gi|50259765|gb|EAL22433.1| hypothetical protein CNBB3120 [Crypto... 154 7e-36
gi|50426173|ref|XP_461683.1| unnamed protein product [Debaryomyc... 154 9e-36
gi|46092307|dbj|BAD14240.1| suppressor of forked [Drosophila kik... 142 3e-32
gi|14714771|gb|AAH10533.1| Similar to cleavage stimulation facto... 138 6e-31
gi|19074012|ref|NP_584618.1| similarity to SUPPRESSOR OF FORKED ... 113 2e-23
gi|46227397|gb|EAK88332.1| mRNA 3' end processing protein RNA14,... 94 1e-17
gi|14602563|gb|AAH09792.1| CSTF3 protein [Homo sapiens] >gnl|BL_... 79 3e-13
gi|26324860|dbj|BAC26184.1| unnamed protein product [Mus musculu... 79 3e-13
gi|23613286|ref|NP_703608.1| hypothetical protein [Plasmodium fa... 79 6e-13
gi|46108724|ref|XP_381420.1| hypothetical protein FG01244.1 [Gib... 71 1e-10
gi|29561840|emb|CAD87784.1| SI:dZ261O22.3 (novel protein similar... 69 4e-10
gi|19113218|ref|NP_596426.1| possible pre-mRNA processing by sim... 69 4e-10
gi|39593121|emb|CAE64590.1| Hypothetical protein CBG09345 [Caeno... 69 5e-10
gi|7499786|pir||T25725 hypothetical protein F25B4.5 - Caenorhabd... 68 1e-09
gi|17560124|ref|NP_504495.1| putative protein, with a coiled coi... 68 1e-09
gi|50557016|ref|XP_505916.1| hypothetical protein [Yarrowia lipo... 67 2e-09
gi|49087740|ref|XP_405772.1| hypothetical protein AN1635.2 [Aspe... 63 3e-08
gi|18379230|ref|NP_563700.1| hydroxyproline-rich glycoprotein fa... 62 4e-08
gi|7485869|pir||T00964 hypothetical protein F20D22.14 - Arabidop... 62 4e-08
gi|45552111|ref|NP_788754.2| CG1646-PD [Drosophila melanogaster]... 62 8e-08
gi|21357975|ref|NP_651634.1| CG1646-PA [Drosophila melanogaster]... 62 8e-08
gi|45551993|ref|NP_733256.2| CG1646-PB [Drosophila melanogaster]... 62 8e-08
gi|39593071|emb|CAE64540.1| Hypothetical protein CBG09283 [Caeno... 61 1e-07
gi|50738577|ref|XP_419315.1| PREDICTED: similar to crooked neck ... 60 2e-07
gi|42408364|dbj|BAD09516.1| putative RNA recognition motif (RRM)... 58 8e-07
gi|49072004|ref|XP_400291.1| hypothetical protein UM02676.1 [Ust... 58 1e-06
gi|7505984|pir||T31808 hypothetical protein M03F8.3 - Caenorhabd... 57 2e-06
gi|17562662|ref|NP_504547.1| crooked neck-like protein 1 (88.0 k... 57 2e-06
gi|34904902|ref|NP_913798.1| similar to pre-mRNA processing prot... 56 3e-06
gi|10177721|dbj|BAB11095.1| unnamed protein product [Arabidopsis... 55 9e-06
gi|30694946|ref|NP_199452.2| expressed protein [Arabidopsis thal... 55 9e-06
gi|50425233|ref|XP_461208.1| unnamed protein product [Debaryomyc... 54 1e-05
gi|46108836|ref|XP_381476.1| hypothetical protein FG01300.1 [Gib... 54 1e-05
gi|10435748|dbj|BAB14659.1| unnamed protein product [Homo sapiens] 54 1e-05
gi|38108992|gb|EAA54929.1| hypothetical protein MG05720.4 [Magna... 53 3e-05
gi|32422945|ref|XP_331916.1| hypothetical protein [Neurospora cr... 53 3e-05
gi|27372168|dbj|BAC53587.1| crn [Homo sapiens] 53 3e-05
gi|11055967|gb|AAF65571.2| CGI-201 protein [Homo sapiens] 52 5e-05
gi|17432229|gb|AAL39004.1| MSTP021 [Homo sapiens] 52 5e-05
gi|12711631|gb|AAK01924.1| CGI-201 protein, short form [Homo sap... 52 5e-05
gi|30795220|ref|NP_057736.3| crooked neck-like 1 protein; CGI-20... 52 5e-05
gi|28201783|sp|Q9BZJ0|CRN1_HUMAN Crooked neck-like protein 1 (Cr... 52 5e-05
gi|46576043|gb|AAT01404.1| putative crooked neck protein [Oryza ... 52 5e-05
gi|13385288|ref|NP_080096.1| crooked neck-like 1 protein [Mus mu... 52 8e-05
gi|49086742|ref|XP_405396.1| hypothetical protein AN1259.2 [Aspe... 52 8e-05
gi|15237354|ref|NP_199411.1| crooked neck protein, putative / ce... 52 8e-05
gi|38084259|ref|XP_144680.2| similar to crooked neck protein [Mu... 50 2e-04
gi|23490021|gb|EAA21893.1| hypothetical protein [Plasmodium yoel... 50 2e-04
gi|31241515|ref|XP_321188.1| ENSANGP00000020818 [Anopheles gambi... 50 2e-04
gi|11292240|pir||T45742 crooked neck-like protein - Arabidopsis ... 50 3e-04
gi|30693892|ref|NP_198992.2| crooked neck protein, putative / ce... 49 4e-04
gi|25083215|gb|AAN72051.1| cell cycle control crn (crooked neck)... 49 4e-04
gi|10434572|dbj|BAB14303.1| unnamed protein product [Homo sapien... 49 4e-04
gi|9716884|emb|CAC01671.1| dJ1002M8.2 (ortholog of Drosophila cr... 48 9e-04
gi|46436707|gb|EAK96065.1| hypothetical protein CaO19.11852 [Can... 48 9e-04
gi|41055634|ref|NP_957240.1| similar to crooked neck protein [Da... 47 0.002
gi|23510025|ref|NP_702691.1| CGI-201 protein, short form [Plasmo... 47 0.003
gi|48103687|ref|XP_395622.1| similar to ENSANGP00000023353 [Apis... 47 0.003
gi|47214625|emb|CAG01466.1| unnamed protein product [Tetraodon n... 46 0.003
gi|38083754|ref|XP_357595.1| similar to crooked neck protein [Mu... 46 0.004
gi|46441877|gb|EAL01171.1| hypothetical protein CaO19.332 [Candi... 46 0.004
gi|17137126|ref|NP_477118.1| CG3193-PA [Drosophila melanogaster]... 45 0.006
gi|7758|emb|CAA41263.1| crn [Drosophila melanogaster] 45 0.006
gi|18409270|ref|NP_566944.1| crooked neck protein, putative / ce... 45 0.010
gi|50556336|ref|XP_505576.1| hypothetical protein [Yarrowia lipo... 44 0.012
gi|46442014|gb|EAL01307.1| hypothetical protein CaO19.7964 [Cand... 44 0.016
gi|10998136|dbj|BAB03107.1| pre-rRNA processing protein RRP5 [Ar... 44 0.016
gi|15229915|ref|NP_187803.1| S1 RNA-binding domain-containing pr... 44 0.016
gi|6671953|gb|AAF23213.1| putative pre-rRNA processing protein, ... 44 0.016
gi|11527209|gb|AAG36938.1| CCN1 [Cryptococcus neoformans var. ne... 44 0.021
gi|33235571|dbj|BAC79783.2| putative pre-rRNA processing protein... 44 0.021
gi|32416528|ref|XP_328742.1| hypothetical protein [Neurospora cr... 43 0.036
gi|31239547|ref|XP_320187.1| ENSANGP00000023353 [Anopheles gambi... 42 0.047
gi|1136430|dbj|BAA11502.1| KIAA0185 [Homo sapiens] 42 0.047
gi|45200913|ref|NP_986483.1| AGL184Wp [Eremothecium gossypii] >g... 42 0.047
gi|42659369|ref|XP_374829.1| programmed cell death 11 [Homo sapi... 42 0.047
gi|33518630|sp|Q14690|RRP5_HUMAN RRP5 protein homolog (Programme... 42 0.047
gi|34863783|ref|XP_219966.2| similar to RRP5 protein homolog (Pr... 40 0.18
gi|50420473|ref|XP_458773.1| unnamed protein product [Debaryomyc... 40 0.18
gi|14579643|gb|AAK69347.1| KIAA0156 isoform [Homo sapiens] 40 0.23
gi|7661952|ref|NP_055521.1| squamous cell carcinoma antigen reco... 40 0.23
gi|19113404|ref|NP_596612.1| similarity to drosophilla crooked n... 40 0.31
gi|10177361|dbj|BAB10652.1| cell cycle control crn (crooked neck... 40 0.31
gi|46116884|ref|XP_384460.1| conserved hypothetical protein [Gib... 40 0.31
gi|42527044|ref|NP_972142.1| TPR domain protein [Treponema denti... 39 0.40
gi|31208771|ref|XP_313352.1| ENSANGP00000011318 [Anopheles gambi... 39 0.40
gi|15231167|ref|NP_187927.1| crooked neck protein, putative / ce... 39 0.40
gi|50412621|ref|XP_457145.1| unnamed protein product [Debaryomyc... 39 0.40
gi|10172609|dbj|BAB01413.1| probable cell cycle control protein;... 39 0.40
gi|38083613|ref|XP_358325.1| programmed cell death protein 11 [M... 39 0.52
gi|37359824|dbj|BAC97890.1| mKIAA0185 protein [Mus musculus] 39 0.52
gi|20129961|ref|NP_610891.1| CG6197-PA [Drosophila melanogaster]... 39 0.52
gi|38173705|gb|AAH38503.1| Pdcd11 protein [Mus musculus] 39 0.52
gi|38085183|ref|XP_355164.1| similar to mKIAA0185 protein [Mus m... 39 0.52
gi|29881676|gb|AAH51231.1| Pdcd11 protein [Mus musculus] 39 0.52
gi|47575693|ref|NP_035183.1| programmed cell death protein 11; p... 39 0.68
gi|50550837|ref|XP_502891.1| hypothetical protein [Yarrowia lipo... 38 0.89
gi|37521458|ref|NP_924835.1| hypothetical protein gll1889 [Gloeo... 38 0.89
gi|39580626|emb|CAE72902.1| Hypothetical protein CBG20217 [Caeno... 38 1.2
gi|8394239|ref|NP_058622.1| squamous cell carcinoma antigen reco... 38 1.2
gi|26352049|dbj|BAC39661.1| unnamed protein product [Mus musculus] 38 1.2
gi|23273663|gb|AAH36350.1| Sart3 protein [Mus musculus] 38 1.2
gi|39104520|dbj|BAC97877.2| mKIAA0156 protein [Mus musculus] 38 1.2
gi|26343775|dbj|BAC35544.1| unnamed protein product [Mus musculus] 38 1.2
gi|38111104|gb|EAA56732.1| hypothetical protein MG07087.4 [Magna... 37 1.5
gi|6323146|ref|NP_013218.1| SYnthetic lethal with cdcForty; Croo... 37 1.5
gi|21450741|ref|NP_659457.1| hypothetical protein FLJ32743 [Homo... 37 2.0
gi|50311719|ref|XP_455887.1| unnamed protein product [Kluyveromy... 37 2.0
gi|40786529|ref|NP_955466.1| XPA binding protein 2; zgc:63949 [D... 37 2.0
gi|23509041|ref|NP_701709.1| hypothetical protein [Plasmodium fa... 37 2.0
gi|34872835|ref|XP_222279.2| similar to tumor-rejection antigen ... 37 2.6
gi|34783757|gb|AAH56771.1| Xab2 protein [Danio rerio] 37 2.6
gi|30704561|gb|AAH51886.1| PRPF39 protein [Homo sapiens] 37 2.6
gi|15606205|ref|NP_213582.1| hypothetical protein aq_854 [Aquife... 37 2.6
gi|47219175|emb|CAG01838.1| unnamed protein product [Tetraodon n... 37 2.6
gi|33946299|ref|NP_060392.2| PRP39 pre-mRNA processing factor 39... 37 2.6
gi|34904788|ref|NP_913741.1| putative adapter protein ATH-55 [Or... 36 3.4
gi|13272293|gb|AAK17076.1| beta-prime subunit of RNA polymerase ... 36 4.4
gi|48096023|ref|XP_392380.1| similar to CG1646-PA [Apis mellifera] 36 4.4
gi|18858179|ref|NP_572520.1| CG7246-PA [Drosophila melanogaster]... 36 4.4
gi|50286179|ref|XP_445518.1| unnamed protein product [Candida gl... 36 4.4
gi|40253455|dbj|BAD05406.1| unknown protein [Oryza sativa (japon... 36 4.4
gi|46439988|gb|EAK99299.1| hypothetical protein CaO19.2563 [Cand... 35 5.8
gi|730825|sp|P38688|SR72_YEAST Signal recognition particle 72 kD... 35 5.8
gi|20092389|ref|NP_618464.1| transcriptional regulator, TetR fam... 35 5.8
gi|50776365|ref|XP_423261.1| PREDICTED: similar to SI:zC191D15.4... 35 5.8
gi|50756486|ref|XP_415181.1| PREDICTED: similar to squamous cell... 35 5.8
gi|37362700|ref|NP_015114.2| part of the signal recognition part... 35 5.8
gi|7458799|gb|AAB41263.3| rhoptry protein [Plasmodium yoelii] 35 7.5
gi|7494466|pir||T28676 rhoptry protein - Plasmodium yoelii (frag... 35 7.5
gi|39586231|emb|CAE66642.1| Hypothetical protein CBG11979 [Caeno... 35 7.5
gi|48096654|ref|XP_394740.1| similar to ENSANGP00000011318 [Apis... 35 7.5
gi|50875980|emb|CAG35820.1| probable lambda CII stability-govern... 35 7.5
gi|23482060|gb|EAA18154.1| rhoptry protein [Plasmodium yoelii yo... 35 7.5
gi|23114766|ref|ZP_00100051.1| COG2896: Molybdenum cofactor bios... 35 9.8
gi|23613137|ref|NP_703459.1| hypothetical protein [Plasmodium fa... 35 9.8
gi|9910260|ref|NP_064581.1| XPA binding protein 2; crn-related p... 35 9.8
gi|46229545|gb|EAK90363.1| crooked neck protein HAT repeats [Cry... 35 9.8
gi|7020915|dbj|BAA91318.1| unnamed protein product [Homo sapiens] 35 9.8
>gi|17533541|ref|NP_495825.1| SUppressor of Forked homolog (84.6 kD)
(suf-1) [Caenorhabditis elegans]
gi|7500061|pir||T21484 hypothetical protein F28C6.6 - Caenorhabditis
elegans
gi|3876355|emb|CAA92672.1| Hypothetical protein F28C6.6
[Caenorhabditis elegans]
Length = 735
Score = 1450 bits (3754), Expect = 0.0
Identities = 723/735 (98%), Positives = 723/735 (98%)
Frame = +1
Query: 1 MSGLSMRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYI 180
MSGLSMRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYI
Sbjct: 1 MSGLSMRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYI 60
Query: 181 EHELRSKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEK 360
EHELRSKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEK
Sbjct: 61 EHELRSKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEK 120
Query: 361 VGMDVQAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCT 540
VGMDVQAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCT
Sbjct: 121 VGMDVQAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCT 180
Query: 541 YEKAINITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELW 720
YEKAINITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELW
Sbjct: 181 YEKAINITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELW 240
Query: 721 KNLIAWEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKG 900
KNLIAWEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKG
Sbjct: 241 KNLIAWEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKG 300
Query: 901 DVKMAQVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHI 1080
DVKMAQVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHI
Sbjct: 301 DVKMAQVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHI 360
Query: 1081 NPTLTYVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRV 1260
NPTLTYVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRV
Sbjct: 361 NPTLTYVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRV 420
Query: 1261 FKLGLKKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFE 1440
FKLGLKKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFE
Sbjct: 421 FKLGLKKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFE 480
Query: 1441 SCVGDLASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNAL 1620
SCVGDLASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNAL
Sbjct: 481 SCVGDLASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNAL 540
Query: 1621 KGTESIAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNC 1800
KGTESIAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNC
Sbjct: 541 KGTESIAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNC 600
Query: 1801 TASXXXXXXXXXXXXQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSED 1980
TAS QSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSED
Sbjct: 601 TASFHPVPGGVFPPPQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSED 660
Query: 1981 NMLGPMLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHLGAVIGSL 2160
NMLGPMLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHLGAVIGSL
Sbjct: 661 NMLGPMLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHLGAVIGSL 720
Query: 2161 GSRDAYKRRMNKKNE 2205
GSRDAYKRRMNKKNE
Sbjct: 721 GSRDAYKRRMNKKNE 735
>gi|7494555|pir||T37268 cleavage stimulation factor - Caenorhabditis
elegans
gi|675505|gb|AAA62311.1| cleavage stimulation factor
Length = 735
Score = 1450 bits (3753), Expect = 0.0
Identities = 722/735 (98%), Positives = 723/735 (98%)
Frame = +1
Query: 1 MSGLSMRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYI 180
MSGLSMRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYI
Sbjct: 1 MSGLSMRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYI 60
Query: 181 EHELRSKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEK 360
EHELRSKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEK
Sbjct: 61 EHELRSKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEK 120
Query: 361 VGMDVQAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCT 540
VGMDVQAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCT
Sbjct: 121 VGMDVQAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCT 180
Query: 541 YEKAINITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELW 720
YEKAINITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELW
Sbjct: 181 YEKAINITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELW 240
Query: 721 KNLIAWEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKG 900
KNLIAWEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKG
Sbjct: 241 KNLIAWEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKG 300
Query: 901 DVKMAQVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHI 1080
DVKMAQVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHI
Sbjct: 301 DVKMAQVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHI 360
Query: 1081 NPTLTYVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRV 1260
NPTLTYVQLMRF+RRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRV
Sbjct: 361 NPTLTYVQLMRFVRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRV 420
Query: 1261 FKLGLKKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFE 1440
FKLGLKKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFE
Sbjct: 421 FKLGLKKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFE 480
Query: 1441 SCVGDLASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNAL 1620
SCVGDLASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNAL
Sbjct: 481 SCVGDLASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNAL 540
Query: 1621 KGTESIAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNC 1800
KGTESIAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNC
Sbjct: 541 KGTESIAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNC 600
Query: 1801 TASXXXXXXXXXXXXQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSED 1980
TAS QSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSED
Sbjct: 601 TASFHPVPGGVFPPPQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSED 660
Query: 1981 NMLGPMLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHLGAVIGSL 2160
NMLGPMLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHLGAVIGSL
Sbjct: 661 NMLGPMLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHLGAVIGSL 720
Query: 2161 GSRDAYKRRMNKKNE 2205
GSRDAYKRRMNKKNE
Sbjct: 721 GSRDAYKRRMNKKNE 735
>gi|773663|gb|AAB01508.1| similar to C. elegans cleavage stimulation
factor encoded by GenBank Accession Number L39893;
Drosophila su(f) homolog, similar to Swiss-Prot Accession
Number P25991
Length = 730
Score = 1441 bits (3731), Expect = 0.0
Identities = 718/730 (98%), Positives = 718/730 (98%)
Frame = +1
Query: 16 MRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELR 195
MRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELR
Sbjct: 1 MRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELR 60
Query: 196 SKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEKVGMDV 375
SKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEKVGMDV
Sbjct: 61 SKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEKVGMDV 120
Query: 376 QAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCTYEKAI 555
QAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCTYEKAI
Sbjct: 121 QAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCTYEKAI 180
Query: 556 NITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELWKNLIA 735
NITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELWKNLIA
Sbjct: 181 NITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELWKNLIA 240
Query: 736 WEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKGDVKMA 915
WEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKGDVKMA
Sbjct: 241 WEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKGDVKMA 300
Query: 916 QVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLT 1095
QVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLT
Sbjct: 301 QVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLT 360
Query: 1096 YVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGL 1275
YVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGL
Sbjct: 361 YVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGL 420
Query: 1276 KKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFESCVGD 1455
KKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFESCVGD
Sbjct: 421 KKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFESCVGD 480
Query: 1456 LASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNALKGTES 1635
LASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNALKGTES
Sbjct: 481 LASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNALKGTES 540
Query: 1636 IAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNCTASXX 1815
IAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNCTAS
Sbjct: 541 IAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNCTASFH 600
Query: 1816 XXXXXXXXXXQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSEDNMLGP 1995
QSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSEDNMLGP
Sbjct: 601 PVPGGVFPPPQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSEDNMLGP 660
Query: 1996 MLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHLGAVIGSLGSRDA 2175
MLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHLGAVIGSLGSRDA
Sbjct: 661 MLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHLGAVIGSLGSRDA 720
Query: 2176 YKRRMNKKNE 2205
YKRRMNKKNE
Sbjct: 721 YKRRMNKKNE 730
>gi|39587101|emb|CAE57568.1| Hypothetical protein CBG00546
[Caenorhabditis briggsae]
Length = 736
Score = 1225 bits (3169), Expect = 0.0
Identities = 606/736 (82%), Positives = 661/736 (89%), Gaps = 1/736 (0%)
Frame = +1
Query: 1 MSGLSMRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYI 180
MSG S+RNPERRIE+NPFDVDAWNLLLREHQSRPIDQER+FYESLV QFPNSGRYW+AYI
Sbjct: 1 MSGFSIRNPERRIESNPFDVDAWNLLLREHQSRPIDQEREFYESLVTQFPNSGRYWRAYI 60
Query: 181 EHELRSKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEK 360
EHELRSKNF VE LF RCL +VLNIDLWKCYI YV ETKG ++YRE MAK +DFALEK
Sbjct: 61 EHELRSKNFVEVEALFQRCLANVLNIDLWKCYIVYVSETKGTIEKYRETMAKTFDFALEK 120
Query: 361 VGMDVQAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCT 540
+GMDV A+SI+ +YIAFLKKVPA+GQYAENQRITAVR++YQKALATPMHNL+ IW DYC
Sbjct: 121 IGMDVLAFSIYQDYIAFLKKVPAIGQYAENQRITAVRRVYQKALATPMHNLDTIWADYCA 180
Query: 541 YEKAINITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELW 720
+EK IN+TLAEKLIAERGK+YQN+RRVEKDLQ MTRGLNRQAVSVPPKGTA+E KQVELW
Sbjct: 181 FEKNINMTLAEKLIAERGKDYQNSRRVEKDLQAMTRGLNRQAVSVPPKGTASESKQVELW 240
Query: 721 KNLIAWEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKG 900
K IAWEKTNPL TEEYGQ ARRVVYTYEQ+LL LGYYPDIWYEAAMFLQEAS TLDEKG
Sbjct: 241 KKYIAWEKTNPLGTEEYGQLARRVVYTYEQALLSLGYYPDIWYEAAMFLQEASQTLDEKG 300
Query: 901 DVKMAQVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHI 1080
DVK+AQ LK+E I LYERAITGLMKESKLLYFAYADFQEE K+F+AVK IY+RLL IE I
Sbjct: 301 DVKLAQALKVECIGLYERAITGLMKESKLLYFAYADFQEEQKKFDAVKEIYNRLLTIEQI 360
Query: 1081 NPTLTYVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRV 1260
NPTLTYVQLMRFIRR+EGPNNARLVFKRAREDKRTGYQVFVAAA +EYNCMKD +VAIRV
Sbjct: 361 NPTLTYVQLMRFIRRTEGPNNARLVFKRAREDKRTGYQVFVAAAHMEYNCMKDADVAIRV 420
Query: 1261 FKLGLKKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFE 1440
FKLGLKKYENEPEFGLAYADFLSN+NEDNNTRVVFERILTSSKLPADK IRIWDRFLDFE
Sbjct: 421 FKLGLKKYENEPEFGLAYADFLSNMNEDNNTRVVFERILTSSKLPADKQIRIWDRFLDFE 480
Query: 1441 SCVGDLASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNAL 1620
SCVGDLASILKVEKRRK AYEEAQKD MNHSMLVIDRYKFMDLMPCSG+QL+LIGY+AL
Sbjct: 481 SCVGDLASILKVEKRRKIAYEEAQKDLGMNHSMLVIDRYKFMDLMPCSGDQLRLIGYDAL 540
Query: 1621 KGTESIAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNC 1800
KG ++ + + K VPT GPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNC
Sbjct: 541 KGNDTPSTSTSSNPKPVPTRGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNC 600
Query: 1801 TASXXXXXXXXXXXXQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSED 1980
TAS + AHLMSLLPPPTCFIGPF+NVE LC++++ QLP++ Y KSE+
Sbjct: 601 TASFHPVPGGVYPPPPAAAHLMSLLPPPTCFIGPFVNVEALCSVLSQTQLPSLQYDKSEN 660
Query: 1981 NMLGPMLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHL-GAVIGS 2157
M+GPM E DVKKD+YQLLATTSDPSAVVRSSAL+DLKRKRGDSD+E++YSHL + IGS
Sbjct: 661 GMIGPMNEADVKKDLYQLLATTSDPSAVVRSSALADLKRKRGDSDEEDEYSHLQSSTIGS 720
Query: 2158 LGSRDAYKRRMNKKNE 2205
+GSRDAYKRRMNKKNE
Sbjct: 721 IGSRDAYKRRMNKKNE 736
>gi|21704042|ref|NP_663504.1| cleavage stimulation factor, 3' pre-RNA,
subunit 3 [Mus musculus]
gi|13096880|gb|AAH03241.1| Cleavage stimulation factor, 3' pre-RNA,
subunit 3 [Mus musculus]
Length = 717
Score = 683 bits (1762), Expect = 0.0
Identities = 350/728 (48%), Positives = 488/728 (66%)
Frame = +1
Query: 16 MRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELR 195
++ E+++E NP+D+DAW++L+RE Q++PID+ R YE LV QFP+SGR+WK YIE E++
Sbjct: 18 VKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIK 77
Query: 196 SKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEKVGMDV 375
+KN++ VEKLF RCL+ VL+IDLWKCY+ YV ETKG+ Y+E+MA+AYDFAL+K+GM++
Sbjct: 78 AKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEI 137
Query: 376 QAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCTYEKAI 555
+Y I+ +YI FLK V AVG YAENQRITAVR++YQ+ PM N+E +W DY YE+ I
Sbjct: 138 MSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGI 197
Query: 556 NITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELWKNLIA 735
NI LA+K+I +R ++Y NARRV K+ + + +GL+R A SVPP+ T E +QV++WK I
Sbjct: 198 NIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYIQ 257
Query: 736 WEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKGDVKMA 915
WEK+NPL+TE+ +RV++ YEQ LL LG++PDIWYEAA +L+++S L EKGD+ A
Sbjct: 258 WEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNA 317
Query: 916 QVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLT 1095
++ E ++YERAI+ L+K++ LLYFAYAD++E ++E V +IY+RLL IE I+PTL
Sbjct: 318 KLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLV 377
Query: 1096 YVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGL 1275
Y+Q M+F RR+EG + R++FK+ARED RT + V+V AAL+EY C KDK VA ++F+LGL
Sbjct: 378 YIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGL 437
Query: 1276 KKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFESCVGD 1455
KKY + PE+ LAY D+LS+LNEDNNTRV+FER+LTS LP +KS IW RFL FES +GD
Sbjct: 438 KKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGD 497
Query: 1456 LASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNALKGTES 1635
LASILKVEKRR TA+ E + + + L++DRYKFMDL PCS +LK +GY + +
Sbjct: 498 LASILKVEKRRFTAFREEYEGK---ETALLVDRYKFMDLYPCSASELKALGYKDVSRAKL 554
Query: 1636 IAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNCTASXX 1815
A +P P A +I+ D + +P+PD QMIPF+PR
Sbjct: 555 AA--------IIP--DPVVAPSIVPVLKDEVD-RKPEYPKPDTQQMIPFQPRHLAPPGLH 603
Query: 1816 XXXXXXXXXXQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSEDNMLGP 1995
+ LM LLPPP CF GPF+ V+ L + ++PN
Sbjct: 604 PVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNT------------ 651
Query: 1996 MLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHLGAVIGSLGSRDA 2175
+E+ V+ + + V SSA+ KR + D +ED GAV+ + D
Sbjct: 652 -VEEAVRIITGGAPELAVEGNGPVESSAVLTKAVKRPNEDSDED-EEKGAVVPPV--HDI 707
Query: 2176 YKRRMNKK 2199
Y+ R K+
Sbjct: 708 YRARQQKR 715
>gi|50416209|gb|AAH77522.1| Unknown (protein for MGC:83109) [Xenopus
laevis]
Length = 718
Score = 683 bits (1762), Expect = 0.0
Identities = 350/730 (47%), Positives = 494/730 (66%), Gaps = 2/730 (0%)
Frame = +1
Query: 16 MRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELR 195
++ E+++E NP+D+DAW++L+RE Q++PID+ R YE LV QFP+SGR+WK YIE E++
Sbjct: 19 VKKAEKKLEDNPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEVK 78
Query: 196 SKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEKVGMDV 375
+KN++ VEKLF RCL+ VL+IDLWKCY+ YV ETKG+ Y+E+MA+AYDFAL+K+GM++
Sbjct: 79 AKNYDKVEKLFQRCLMKVLHIDLWKCYVSYVRETKGKLPSYKEKMAQAYDFALDKIGMEI 138
Query: 376 QAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCTYEKAI 555
+Y I+ +YI FLK V AVG YAENQRITAVR++YQ+ PM N+E +W DY YE+ I
Sbjct: 139 MSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGI 198
Query: 556 NITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELWKNLIA 735
N+ LA+K+I +R ++Y NARRV K+ + + +GL+R A SVPP+ T E +QVE+WK I
Sbjct: 199 NVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVEMWKKYIQ 258
Query: 736 WEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKGDVKMA 915
WEK+NPL+TE+ +RV++ YEQ LL LG++PDIWYEAA +L+++S L EKGD+ A
Sbjct: 259 WEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNA 318
Query: 916 QVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLT 1095
++ E ++YERAI+ L+K++ LLYFAYAD++E ++E +IY+RLL IE I+PTL
Sbjct: 319 KLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKTHSIYNRLLSIEDIDPTLV 378
Query: 1096 YVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGL 1275
Y+Q M+F RR+EG + R++FK+ARED RT + V+V AAL+EY C KD VA ++F+LGL
Sbjct: 379 YIQYMKFARRAEGIKSGRMIFKKAREDPRTRHHVYVTAALMEYYCSKDTSVAFKIFELGL 438
Query: 1276 KKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFESCVGD 1455
KKY + PE+ LAY D+LS+LNEDNNTRV+FER+LTS LP +KS IW RFL FES +GD
Sbjct: 439 KKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGD 498
Query: 1456 LASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNALKGTES 1635
LASILKVEKRR TA++E + + + L++DRYKFMDL PCS +LK +GY + +
Sbjct: 499 LASILKVEKRRYTAFKEEYEGK---ETALLVDRYKFMDLYPCSTSELKALGYKDVSRAKL 555
Query: 1636 IAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNCTASXX 1815
A +P P A +I AD + +P+PD SQMIPF+PR
Sbjct: 556 TA--------LIP--DPVVAPSIAPSQKDDAD-RKPEYPKPDTSQMIPFQPRHLAPPGLH 604
Query: 1816 XXXXXXXXXXQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSEDNMLGP 1995
+ LM LLPPP CF GPF+ V+ + ++ +LP+ + ++ + G
Sbjct: 605 PVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDEILEILRRCKLPD-TVEEAARIITGS 663
Query: 1996 MLEQDVKKDMYQLLATTSDPSAVVRSSAL--SDLKRKRGDSDDEEDYSHLGAVIGSLGSR 2169
E + S+ + V +A+ +KR DSDDEE+ G+V+ +
Sbjct: 664 QAEMN------------SEGNGPVEVNAILNKSVKRPNEDSDDEEE---KGSVVPPV--H 706
Query: 2170 DAYKRRMNKK 2199
D Y+ R K+
Sbjct: 707 DIYRTRQQKR 716
>gi|4557495|ref|NP_001317.1| cleavage stimulation factor subunit 3
[Homo sapiens]
gi|1082704|pir||S50852 cleavage stimulation factor 77K chain - human
gi|632498|gb|AAA61417.1| cleavage stimulation factor 77kDa subunit
gi|1092656|prf||2024339A cleavage stimulation factor
Length = 717
Score = 682 bits (1760), Expect = 0.0
Identities = 349/728 (47%), Positives = 489/728 (66%)
Frame = +1
Query: 16 MRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELR 195
++ E+++E NP+D+DAW++L+RE Q++PID+ R YE LV QFP+SGR+WK YIE E++
Sbjct: 18 VKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIK 77
Query: 196 SKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEKVGMDV 375
+KN++ VEKLF RCL+ VL+IDLWKCY+ YV ETKG+ Y+E+MA+AYDFAL+K+GM++
Sbjct: 78 AKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEI 137
Query: 376 QAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCTYEKAI 555
+Y I+ +YI FLK V AVG YAENQRITAVR++YQ+ PM N+E +W DY YE+ I
Sbjct: 138 MSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGI 197
Query: 556 NITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELWKNLIA 735
NI LA+K+I +R ++Y NARRV K+ + + +GL+R A SVPP+ T E +QV++WK I
Sbjct: 198 NIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYIQ 257
Query: 736 WEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKGDVKMA 915
WEK+NPL+TE+ +RV++ YEQ LL LG++PDIWYEAA +L+++S L EKGD+ A
Sbjct: 258 WEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNA 317
Query: 916 QVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLT 1095
++ E ++YERAI+ L+K++ LLYFAYAD++E ++E V +IY+RLL IE I+PTL
Sbjct: 318 KLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLV 377
Query: 1096 YVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGL 1275
Y+Q M+F RR+EG + R++FK+ARED RT + V+V AAL+EY C KDK VA ++F+LGL
Sbjct: 378 YIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEYYCSKDKSVAFKIFELGL 437
Query: 1276 KKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFESCVGD 1455
KKY + PE+ LAY D+LS+LNEDNNTRV+FER+LTS LP +KS IW RFL FES +GD
Sbjct: 438 KKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGD 497
Query: 1456 LASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNALKGTES 1635
LASILKVEKRR TA++E + + + L++DRYKFMDL PCS +LK +GY + +
Sbjct: 498 LASILKVEKRRFTAFKEEYEGK---ETALLVDRYKFMDLYPCSASELKALGYKDVSRAKL 554
Query: 1636 IAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNCTASXX 1815
A +P P A +I+ D + +P+PD QMIPF+PR
Sbjct: 555 AA--------IIP--DPVVAPSIVPVLKDEVD-RKPEYPKPDTQQMIPFQPRHLAPPGLH 603
Query: 1816 XXXXXXXXXXQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSEDNMLGP 1995
+ LM LLPPP CF GPF+ V+ L + ++PN
Sbjct: 604 PVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNT------------ 651
Query: 1996 MLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHLGAVIGSLGSRDA 2175
+E+ V+ + + V S+A+ KR + D +ED GAV+ + D
Sbjct: 652 -VEEAVRIITGGAPELAVEGNGPVESNAVLTKAVKRPNEDSDED-EEKGAVVPPV--HDI 707
Query: 2176 YKRRMNKK 2199
Y+ R K+
Sbjct: 708 YRARQQKR 715
>gi|15131402|emb|CAC48252.1| dJ85M6.1 (cleavage stimulation factor, 3'
pre-RNA, subunit 3, 77kD) [Homo sapiens]
Length = 708
Score = 682 bits (1760), Expect = 0.0
Identities = 349/728 (47%), Positives = 489/728 (66%)
Frame = +1
Query: 16 MRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELR 195
++ E+++E NP+D+DAW++L+RE Q++PID+ R YE LV QFP+SGR+WK YIE E++
Sbjct: 9 VKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIK 68
Query: 196 SKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEKVGMDV 375
+KN++ VEKLF RCL+ VL+IDLWKCY+ YV ETKG+ Y+E+MA+AYDFAL+K+GM++
Sbjct: 69 AKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEI 128
Query: 376 QAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCTYEKAI 555
+Y I+ +YI FLK V AVG YAENQRITAVR++YQ+ PM N+E +W DY YE+ I
Sbjct: 129 MSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGI 188
Query: 556 NITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELWKNLIA 735
NI LA+K+I +R ++Y NARRV K+ + + +GL+R A SVPP+ T E +QV++WK I
Sbjct: 189 NIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYIQ 248
Query: 736 WEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKGDVKMA 915
WEK+NPL+TE+ +RV++ YEQ LL LG++PDIWYEAA +L+++S L EKGD+ A
Sbjct: 249 WEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNA 308
Query: 916 QVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLT 1095
++ E ++YERAI+ L+K++ LLYFAYAD++E ++E V +IY+RLL IE I+PTL
Sbjct: 309 KLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLV 368
Query: 1096 YVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGL 1275
Y+Q M+F RR+EG + R++FK+ARED RT + V+V AAL+EY C KDK VA ++F+LGL
Sbjct: 369 YIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEYYCSKDKSVAFKIFELGL 428
Query: 1276 KKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFESCVGD 1455
KKY + PE+ LAY D+LS+LNEDNNTRV+FER+LTS LP +KS IW RFL FES +GD
Sbjct: 429 KKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGD 488
Query: 1456 LASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNALKGTES 1635
LASILKVEKRR TA++E + + + L++DRYKFMDL PCS +LK +GY + +
Sbjct: 489 LASILKVEKRRFTAFKEEYEGK---ETALLVDRYKFMDLYPCSASELKALGYKDVSRAKL 545
Query: 1636 IAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNCTASXX 1815
A +P P A +I+ D + +P+PD QMIPF+PR
Sbjct: 546 AA--------IIP--DPVVAPSIVPVLKDEVD-RKPEYPKPDTQQMIPFQPRHLAPPGLH 594
Query: 1816 XXXXXXXXXXQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSEDNMLGP 1995
+ LM LLPPP CF GPF+ V+ L + ++PN
Sbjct: 595 PVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNT------------ 642
Query: 1996 MLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHLGAVIGSLGSRDA 2175
+E+ V+ + + V S+A+ KR + D +ED GAV+ + D
Sbjct: 643 -VEEAVRIITGGAPELAVEGNGPVESNAVLTKAVKRPNEDSDED-EEKGAVVPPV--HDI 698
Query: 2176 YKRRMNKK 2199
Y+ R K+
Sbjct: 699 YRARQQKR 706
>gi|50741938|ref|XP_419632.1| PREDICTED: similar to cleavage
stimulation factor subunit 3; cleavage stimulation
factor, 3 pre-RNA, subunit 3, 77kD [Gallus gallus]
Length = 718
Score = 682 bits (1759), Expect = 0.0
Identities = 349/730 (47%), Positives = 494/730 (66%), Gaps = 2/730 (0%)
Frame = +1
Query: 16 MRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELR 195
++ E+++E NP+D+DAW++L+RE Q++PID+ R YE LV QFP+SGR+WK YIE E++
Sbjct: 19 VKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIK 78
Query: 196 SKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEKVGMDV 375
+KN++ VEKLF RCL+ VL+IDLWKCY+ YV ETKG+ Y+E+MA+AYDFAL+K+GM++
Sbjct: 79 AKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEI 138
Query: 376 QAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCTYEKAI 555
+Y I+ +YI FLK V AVG YAENQRITAVR++YQ+ PM N+E +W DY YE+ I
Sbjct: 139 MSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGI 198
Query: 556 NITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELWKNLIA 735
NI LA+K+I +R ++Y NARRV K+ + + +GL+R A SVPP+ T E +QV++WK I
Sbjct: 199 NIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYIQ 258
Query: 736 WEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKGDVKMA 915
WEK+NPL+TE+ +RV++ YEQ LL LG++PDIWYEAA +L+++S L EKGD+ A
Sbjct: 259 WEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNA 318
Query: 916 QVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLT 1095
++ E ++YERAI+ L+K++ LLYFAYAD++E ++E V +IY+RLL IE I+PTL
Sbjct: 319 KLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLV 378
Query: 1096 YVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGL 1275
Y+Q M+F RR+EG + R++FK+ARED RT + V+V AAL+EY C KDK VA ++F+LGL
Sbjct: 379 YIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEYYCSKDKSVAFKIFELGL 438
Query: 1276 KKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFESCVGD 1455
KKY + PE+ LAY D+LS+LNEDNNTRV+FER+LTS LP +KS IW RFL FES +GD
Sbjct: 439 KKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGD 498
Query: 1456 LASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNALKGTES 1635
LASILKVEKRR TA++E + + + L++DRYKFMDL PCS +LK +GY + +
Sbjct: 499 LASILKVEKRRFTAFKEEYEGK---ETALLVDRYKFMDLYPCSASELKALGYKDVSRAKL 555
Query: 1636 IAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNCTASXX 1815
A +P P A +I+ D + +P+PD QMIPF+PR
Sbjct: 556 AA--------IIP--DPVVAPSIVPVLKDEVD-RKPEYPKPDTQQMIPFQPRHLAPPGLH 604
Query: 1816 XXXXXXXXXXQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSEDNMLGP 1995
+ LM LLPPP CF GPF+ V+ L + +LP+
Sbjct: 605 PVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKLPDT------------ 652
Query: 1996 MLEQDVKKDMYQLLATTSDPSAVVRSSALSD--LKRKRGDSDDEEDYSHLGAVIGSLGSR 2169
+++ V+ L + + V ++A+ + +KR DSDD+E+ G+V+ +
Sbjct: 653 -VDEAVRIITGGLPEIAVEGNGPVENNAMLNKAVKRSNEDSDDDEE---KGSVVPPV--H 706
Query: 2170 DAYKRRMNKK 2199
D Y+ R K+
Sbjct: 707 DIYRARQQKR 716
>gi|45361053|ref|NP_989162.1| hypothetical protein MGC76035 [Xenopus
tropicalis]
gi|38649389|gb|AAH63376.1| Hypothetical protein MGC76035 [Xenopus
tropicalis]
Length = 718
Score = 680 bits (1755), Expect = 0.0
Identities = 347/729 (47%), Positives = 490/729 (66%), Gaps = 1/729 (0%)
Frame = +1
Query: 16 MRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELR 195
++ E+++E NP+D+DAW++L+RE Q++PID+ R YE LV QFP+SGR+WK YIE E++
Sbjct: 19 VKKAEKKLEDNPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEVK 78
Query: 196 SKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEKVGMDV 375
+KN++ VEKLF RCL+ VL+IDLWKCY+ YV ETKG+ Y+E+MA+AYDFAL+K+GM++
Sbjct: 79 AKNYDKVEKLFQRCLMKVLHIDLWKCYVSYVRETKGKLPSYKEKMAQAYDFALDKIGMEI 138
Query: 376 QAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCTYEKAI 555
+Y I+ +YI FLK V AVG YAENQRITAVR++YQ+ PM N+E +W DY YE+ I
Sbjct: 139 MSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGI 198
Query: 556 NITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELWKNLIA 735
NI LA+K+I +R ++Y NARRV K+ + + +GL+R A SVPP+ T E +QVE+WK I
Sbjct: 199 NIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVEMWKKYIQ 258
Query: 736 WEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKGDVKMA 915
WEK+NPL+TE+ +RV++ YEQ LL LG++PDIWYEA +L+++S L EKGD+ A
Sbjct: 259 WEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAGQYLEQSSKLLAEKGDMNNA 318
Query: 916 QVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLT 1095
++ E ++YERAI+ L+K++ LLYFAYAD++E ++E +IY+RLL IE I+PTL
Sbjct: 319 KLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKTHSIYNRLLAIEDIDPTLV 378
Query: 1096 YVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGL 1275
Y+Q M+F RR+EG + R++FK+ARED RT + V+V AAL+EY C KD VA ++F+LGL
Sbjct: 379 YIQYMKFARRAEGIKSGRMIFKKAREDPRTRHHVYVTAALMEYYCSKDTSVAFKIFELGL 438
Query: 1276 KKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFESCVGD 1455
KKY + PE+ LAY D+LS+LNEDNNTRV+FER+LTS LP +KS IW RFL FES +GD
Sbjct: 439 KKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGD 498
Query: 1456 LASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNALKGTES 1635
LASILKVEKRR TA++E + + + L++DRYKFMDL PCS +LK +GY +
Sbjct: 499 LASILKVEKRRYTAFKEEYEGK---ETALLVDRYKFMDLYPCSTSELKALGY------KD 549
Query: 1636 IAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARY-GFPRPDISQMIPFKPRVNCTASX 1812
++ P P A ++ DV R +P+PD SQMIPF+PR
Sbjct: 550 VSRAKLAALIPDPVIAPSIAPSLKD------DVDRKPEYPKPDTSQMIPFQPRHLAPPGL 603
Query: 1813 XXXXXXXXXXXQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSEDNMLG 1992
+ LM LLPPP CF GPF+ V+ + ++ +LP+ + ++ + G
Sbjct: 604 HPVPGGVFPVPPAAVILMKLLPPPICFQGPFVQVDEIMEILRRCKLPD-TVEEAVRIITG 662
Query: 1993 PMLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHLGAVIGSLGSRD 2172
E +++ + V + +KR DSDDEE+ G+V+ + D
Sbjct: 663 SQAEMNME----------GNGPVEVNTLLNKSVKRPNEDSDDEEE---KGSVVPPV--HD 707
Query: 2173 AYKRRMNKK 2199
Y+ R K+
Sbjct: 708 IYRTRQQKR 716
>gi|47085767|ref|NP_998218.1| zgc:56028 [Danio rerio]
gi|28277806|gb|AAH45871.1| Zgc:56028 [Danio rerio]
Length = 716
Score = 671 bits (1732), Expect = 0.0
Identities = 341/735 (46%), Positives = 482/735 (65%), Gaps = 7/735 (0%)
Frame = +1
Query: 16 MRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELR 195
++ E+++E NP+D+DAW++L+RE Q++PID+ R YE LV QFP+SGR+WK YIE E++
Sbjct: 18 VKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIK 77
Query: 196 SKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEKVGMDV 375
+KN++ VEKLF RCL+ VL+IDLWKCY+ YV ETKG+ Y+E+M +AYDFAL+K+GM++
Sbjct: 78 AKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEKMPQAYDFALDKIGMEI 137
Query: 376 QAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCTYEKAI 555
+Y I+ +YI FLK V AVG YAENQRITAVR++YQ+ PM N+E +W DY YE+ I
Sbjct: 138 MSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYSKYEEGI 197
Query: 556 NITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELWKNLIA 735
N+ LA+K+I +R ++Y NARRV K+ + + +GL+R A SVPP+ + E +QVE+WK I
Sbjct: 198 NVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNSPQEAQQVEMWKKYIQ 257
Query: 736 WEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKGDVKMA 915
WEK+NPL+TE+ +RV++ YEQ LL LG++PDIWYEAA +L+++S L EKGD+ A
Sbjct: 258 WEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNA 317
Query: 916 QVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLT 1095
++ E ++YERAI L+K++ LLYF++AD++E + E V +IY+RLL IE I+PTL
Sbjct: 318 KLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKHEKVHSIYNRLLAIEDIDPTLV 377
Query: 1096 YVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGL 1275
Y+Q M+F RR+EG + R +FK+ARED RT + V+V AAL+EY C KDK VA ++F+LGL
Sbjct: 378 YIQYMKFARRAEGIKSGRSIFKKAREDPRTRHHVYVTAALMEYYCSKDKSVAFKIFELGL 437
Query: 1276 KKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFESCVGD 1455
KKY + PE+ LAY D+LS+LNEDNNTRV+FER+LTS L +KS IW RFL FES +GD
Sbjct: 438 KKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEKSGEIWARFLAFESNIGD 497
Query: 1456 LASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNALKGT-- 1629
LASILKVE+RR A+++ + + + L++DRYKFMDL PCS +LK +GY +
Sbjct: 498 LASILKVERRRFMAFKDEYEGK---ETALLVDRYKFMDLYPCSPSELKALGYKDVSRAKY 554
Query: 1630 -----ESIAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRV 1794
E++ PS K+ P+ +P+PD QMIPF+PR
Sbjct: 555 ASLIPEAVVAPSTPALKDEADRKPE-------------------YPKPDTCQMIPFQPRH 595
Query: 1795 NCTASXXXXXXXXXXXXQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKS 1974
+ LM LLPPP+CF GPF+ V+ + + LP+ + +
Sbjct: 596 LAPPGLHPVPGGVFPVPPAAVVLMKLLPPPSCFTGPFVQVDEMMEALRRCVLPD-TVDAA 654
Query: 1975 EDNMLGPMLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHLGAVIG 2154
+ + G LE +++ + S A LKR DSD+EED + I
Sbjct: 655 VELITGKQLE----------MSSEGNGPVENHSVANKSLKRPNADSDEEEDKGSIAPPI- 703
Query: 2155 SLGSRDAYKRRMNKK 2199
D Y+ R K+
Sbjct: 704 ----HDIYRARQQKR 714
>gi|48097725|ref|XP_393870.1| similar to ENSANGP00000017604 [Apis
mellifera]
Length = 1312
Score = 663 bits (1711), Expect = 0.0
Identities = 343/729 (47%), Positives = 485/729 (66%), Gaps = 1/729 (0%)
Frame = +1
Query: 16 MRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELR 195
++ ++ ++ +P+D++AW++L+RE Q+RPI + R +E LV FP++GRYWK YIE E++
Sbjct: 15 LQRAQKTVDESPYDLEAWSILIREAQNRPITEVRPVFEKLVSVFPSAGRYWKIYIEQEMK 74
Query: 196 SKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEKVGMDV 375
+NFE VEKLF RCL+ +LNI+LWK Y+ YV ETK Y+E+MA+AYDFAL+K+GMD+
Sbjct: 75 MRNFEKVEKLFQRCLMKILNIELWKLYLSYVKETKASLTTYKEKMAQAYDFALDKIGMDI 134
Query: 376 QAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCTYEKAI 555
+YSI+ +Y+ FLK V AVG YAENQ+I+AVRK+YQ+ + PM N+E +W DY +E+ I
Sbjct: 135 HSYSIWNDYVTFLKSVEAVGSYAENQKISAVRKVYQRGVVNPMINMEQLWKDYMAFEQNI 194
Query: 556 NITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELWKNLIA 735
N +AEK+ ER ++Y NARRV K+L+ +TRGLNR A SVPP G E KQVELWK IA
Sbjct: 195 NPIIAEKMAIERSRDYMNARRVAKELEAVTRGLNRSAPSVPPTGHPEEVKQVELWKKYIA 254
Query: 736 WEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKGDVKMA 915
WE++NPL+TE+ ARRV++ EQ LLCLG++P +W++AA FL+ +S L EKGDV A
Sbjct: 255 WERSNPLRTEDTSLVARRVMFAIEQCLLCLGHHPAVWHQAAHFLELSSKILTEKGDVNAA 314
Query: 916 QVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLT 1095
+ L E +++ERA + L+ ++ LLYFA+ADF+E ++E V IY + L I I+PTL
Sbjct: 315 KNLSDEAATMFERATSTLLSKNMLLYFAHADFEEGRVKYEKVHQIYQKFLDIPDIDPTLA 374
Query: 1096 YVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGL 1275
+VQ M+F RR+EG +AR VFKRARED R + V+VAAAL+EY C KDK +A R+F+LGL
Sbjct: 375 FVQYMKFARRAEGIKSARTVFKRAREDPRCKHHVYVAAALMEYYCTKDKNIAFRIFELGL 434
Query: 1276 KKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFESCVGD 1455
KK+ + P++ L Y D+LS+LNEDNNTRV+FER+L+S L +KS+ IW+RFL+FES +GD
Sbjct: 435 KKFGDNPDYILCYIDYLSHLNEDNNTRVLFERVLSSGSLEPEKSVDIWNRFLEFESNIGD 494
Query: 1456 LASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNALKGTES 1635
LASI+KVEKRR E+ ++ + + LV DRYKF+DL PC+ +L+ IGY + S
Sbjct: 495 LASIVKVEKRRSAVLEKIKEFEGKETAQLV-DRYKFLDLYPCTPMELRSIGYMEV----S 549
Query: 1636 IAGPSFVGS-KNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNCTASX 1812
G S G+ +P P+ A A PRPDISQMIP+KP+VN
Sbjct: 550 SVGRSTTGALPRIP--DPEEAIA--------------SLPRPDISQMIPYKPKVNPLPGE 593
Query: 1813 XXXXXXXXXXXQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSEDNMLG 1992
+ A L ++LPPP CF GPF+ V+LL ++ N +QLP+ + DN
Sbjct: 594 HPVPGGSFPLPPAAAQLCTMLPPPGCFRGPFVAVDLLMDVFNRIQLPDHAPLPVADNGCD 653
Query: 1993 PMLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSHLGAVIGSLGSRD 2172
L D+ K ++ ++ ++D V + R GD +EED + + D
Sbjct: 654 TKL-FDLAKSVHWIVDESNDG---VSLGSKRRRTRLGGDDSEEED-------LPPPPAND 702
Query: 2173 AYKRRMNKK 2199
Y++R K+
Sbjct: 703 IYRQRQQKR 711
>gi|31205813|ref|XP_311858.1| ENSANGP00000017604 [Anopheles gambiae]
gi|21295792|gb|EAA07937.1| ENSANGP00000017604 [Anopheles gambiae str.
PEST]
Length = 707
Score = 640 bits (1650), Expect = 0.0
Identities = 332/728 (45%), Positives = 470/728 (63%), Gaps = 4/728 (0%)
Frame = +1
Query: 28 ERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELRSKNF 207
++ +E PFDV++W+LL+RE QSR +++ R YESLV FP + RYWK YIE E++ +N+
Sbjct: 11 QQTVEVRPFDVESWSLLVREGQSRHVNEVRSLYESLVCVFPTTARYWKVYIEQEMKYRNY 70
Query: 208 ENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEKVGMDVQAYS 387
E VEKLF RCLV +LNIDLWK Y+ YV ETK ++E+MA+AYDFALEK+GMD+ ++S
Sbjct: 71 ERVEKLFQRCLVKILNIDLWKLYLTYVKETKAGLSTHKEKMAQAYDFALEKIGMDLHSFS 130
Query: 388 IFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCTYEKAINITL 567
I+T+YI FLK V AVG YAENQ+ITAVRK+YQ+A+ TP+ +E +W DY +E+ IN +
Sbjct: 131 IWTDYIMFLKSVDAVGSYAENQKITAVRKVYQRAVITPIIGIEHLWKDYIAFEQNINPII 190
Query: 568 AEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELWKNLIAWEKT 747
+EK+ ER ++Y NARRV K+L+ +T+GLNR +VPP T E KQVELWK IA+EK+
Sbjct: 191 SEKMSVERSRDYMNARRVAKELEIVTKGLNRNLPAVPPTVTKEEIKQVELWKKYIAFEKS 250
Query: 748 NPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKGDVKMAQVLK 927
NPL++E+ RRV++ EQ LL L ++P +W++AA +L ++S L EKGD+ A+V
Sbjct: 251 NPLRSEDNALVTRRVMFAIEQCLLVLTHHPAVWHQAAQYLDQSSKLLVEKGDLNAAKVFS 310
Query: 928 LETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLTYVQL 1107
E ++ ERAI ++ + LLYFAYADF+E +++ V +Y++ L I I+PTL Y+Q
Sbjct: 311 DEAANILERAINSVLSRNALLYFAYADFEEGRLKYDKVHQMYNKFLAINDIDPTLAYIQY 370
Query: 1108 MRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGLKKYE 1287
M+F RR+EG +AR VFK+ARED R+ Y VFVAAAL+EY C KDK++A R+F+LGLK++
Sbjct: 371 MKFARRAEGIKSARAVFKKAREDVRSTYHVFVAAALMEYYCSKDKDIAFRIFELGLKRFG 430
Query: 1288 NEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFESCVGDLASI 1467
PE+ + Y D+LS+LNEDNNTRV+FER+L+S L S+ +W+RFL+FES +GDL+SI
Sbjct: 431 GSPEYVMCYIDYLSHLNEDNNTRVLFERVLSSGGLTPQLSVEVWNRFLEFESNIGDLSSI 490
Query: 1468 LKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNALKGTESIAG- 1644
+KVE+RR E+ ++ + + LV DRYKF+DL PCS +LK IGY+ +G S+ G
Sbjct: 491 VKVERRRSAVLEKLKEFEGKETAQLV-DRYKFLDLYPCSPSELKSIGYSETRGMLSVTGV 549
Query: 1645 -PSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIPFKPRVNCTASXXXX 1821
P P Q A RPD SQMIP+KP+ N
Sbjct: 550 KPPPAPVPEQPEQPQQLA-------------------RPDFSQMIPYKPKPNAFPGEHPV 590
Query: 1822 XXXXXXXXQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSEDNMLGPML 2001
++A L ++LPPP F GPF++V+ + + N +QLP V P S+ +
Sbjct: 591 PGGTFPQPAALAALCAILPPPVSFQGPFVSVDKIIEVFNRIQLPEVPPPPSDSTADSRLF 650
Query: 2002 EQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRG--DSDDEEDYSHLGAVIGSLGSRDA 2175
E + K ++ ++ D S L + G DSDDE AV + + D
Sbjct: 651 E--LAKSVHWIV----DDSTYASEGGLKRRRMAPGGEDSDDE-------AVAPAPPANDI 697
Query: 2176 YKRRMNKK 2199
Y+ R K+
Sbjct: 698 YRLRQQKR 705
>gi|47550839|ref|NP_999884.1| cleavage stimulation factor, 3' pre-RNA,
subunit 3, 77kDa [Danio rerio]
gi|46403221|gb|AAS92630.1| cleavage stimulation factor, 3' pre-RNA,
subunit 3, 77kDa [Danio rerio]
Length = 715
Score = 639 bits (1648), Expect = 0.0
Identities = 333/741 (44%), Positives = 477/741 (63%), Gaps = 13/741 (1%)
Frame = +1
Query: 16 MRNPERRIETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELR 195
++ E+++E NP+D+DAW++L+RE Q++PID+ R YE LV QFP+SGR+WK YIE E++
Sbjct: 18 VKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIK 77
Query: 196 SKNFENVEKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEKVGMDV 375
+KN++ VEKLF RCL+ VL+IDLWKCY+ YV ETKG+ Y+E+MA+AYDFAL+K+GM++
Sbjct: 78 AKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEI 137
Query: 376 QAYSIFTEYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCTYEKAI 555
+Y I+ +YI FLK V AVG YAENQRITAVR++YQ+ PM N+E +W DY YE+ I
Sbjct: 138 MSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYSKYEEGI 197
Query: 556 NITLAEKLIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELWKNLIA 735
N+ LA+K+I +R ++Y NARRV K+ + + +GL+R A SVPP+ + E +QVE+WK I
Sbjct: 198 NVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNSPQEAQQVEMWKKYIQ 257
Query: 736 WEKTNPLQTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKGDVKMA 915
WEK+NPL+TE+ +RV++ YEQ LL LG++PDIWYEAA +L+++S L EKGD+ A
Sbjct: 258 WEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNA 317
Query: 916 QVLKLETISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLT 1095
++ E ++YERAI L+K++ LLYF++AD++E + E V +IY+RLL IE I+PTL
Sbjct: 318 KLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKHEKVHSIYNRLLAIEDIDPTLV 377
Query: 1096 YVQLMRFIRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGL 1275
Y+Q M+F RR+EG + R +FK+ARED RT + V+V AAL+EY C KDK VA ++F+LGL
Sbjct: 378 YIQYMKFARRAEGIKSGRSIFKKAREDPRTRHHVYVTAALMEYYCSKDKSVAFKIFELGL 437
Query: 1276 KKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFESCVGD 1455
KKY + PE+ LAY D+LS+LNEDNNTRV+FER+LTS L +KS IW RFL FES +GD
Sbjct: 438 KKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEKSGEIWARFLAFESNIGD 497
Query: 1456 LASILKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNALKGT-- 1629
LASILKVE+RR A+++ + + + L++DRYKFMDL PCS +LK +GY +
Sbjct: 498 LASILKVERRRFMAFKDEYEGK---ETALLVDRYKFMDLYPCSPSELKALGYKDVSRAKY 554
Query: 1630 -----ESIAGPSFVGSKNVPTHGPQAASAIMGGAGGHADVARYGFPRPDISQMIP----- 1779
E++ PS K+ P+ +P+PD QMIP
Sbjct: 555 ASLIPEAVVAPSTPALKDEADRKPE-------------------YPKPDTCQMIPSSRGT 595
Query: 1780 FKP-RVNCTASXXXXXXXXXXXXQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPN 1956
++P +C+ ++ A L PF+ V+ + + LP+
Sbjct: 596 WRPWAASCSRRSVSCSSCCCRPDEAAASSQLL-------YRPFVQVDEMMEALRRCVLPD 648
Query: 1957 VSYPKSEDNMLGPMLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKRGDSDDEEDYSH 2136
+ + + + G LE +++ + S A LKR DSD+EED
Sbjct: 649 -TVDAAVELITGKQLE----------MSSEGNGPVENHSVANKSLKRPNADSDEEEDKGS 697
Query: 2137 LGAVIGSLGSRDAYKRRMNKK 2199
+ I D Y+ R K+
Sbjct: 698 IAPPI-----HDIYRARQQKR 713
>gi|4092534|gb|AAC99436.1| suppressor of forked protein; Su(f) protein
[Drosophila virilis]
Length = 737
Score = 635 bits (1639), Expect = 0.0
Identities = 331/711 (46%), Positives = 465/711 (64%), Gaps = 16/711 (2%)
Frame = +1
Query: 37 IETNPFDVDAWNLLLREHQSRPIDQERDFYESLVKQFPNSGRYWKAYIEHELRSKNFENV 216
+E P+D+++W+++LRE Q+RPI + R YESLV FP + RYWK YIE E+RS+ +E V
Sbjct: 26 VELRPYDIESWSVMLREAQTRPIHEVRSLYESLVNVFPTTARYWKLYIEMEMRSRYYERV 85
Query: 217 EKLFSRCLVSVLNIDLWKCYIHYVFETKGQRDQYREEMAKAYDFALEKVGMDVQAYSIFT 396
EKLF RCLV +LNIDLWK Y+ YV ETK ++E+MA+AYDFALEK+GMD+ ++SI+
Sbjct: 86 EKLFQRCLVKILNIDLWKLYLTYVKETKAGLSTHKEKMAQAYDFALEKIGMDLHSFSIWQ 145
Query: 397 EYIAFLKKVPAVGQYAENQRITAVRKIYQKALATPMHNLELIWNDYCTYEKAINITLAEK 576
+YI FL+ V AVG YAENQ+ITAVR++YQKA+ TP+ +E +W DY +E+ IN ++EK
Sbjct: 146 DYIYFLRGVEAVGNYAENQKITAVRRVYQKAVVTPIVGIEQLWKDYIAFEQNINPIISEK 205
Query: 577 LIAERGKEYQNARRVEKDLQQMTRGLNRQAVSVPPKGTATEFKQVELWKNLIAWEKTNPL 756
+ ER K+Y NARRV K+L+ T+GLNR +VPP T E KQVELWK I +EK+NPL
Sbjct: 206 MSLERSKDYMNARRVAKELEYHTKGLNRNLPAVPPTLTKEETKQVELWKRFITYEKSNPL 265
Query: 757 QTEEYGQHARRVVYTYEQSLLCLGYYPDIWYEAAMFLQEASHTLDEKGDVKMAQVLKLET 936
+TE+ RRV++ EQ LL L ++P +W++A+ FL ++ L EKGDV+ A++ E
Sbjct: 266 RTEDTALVTRRVMFATEQCLLVLTHHPAVWHQASQFLDTSARVLTEKGDVQAAKIFADEC 325
Query: 937 ISLYERAITGLMKESKLLYFAYADFQEEHKQFEAVKNIYDRLLGIEHINPTLTYVQLMRF 1116
++ ER+I G++ + LLYFAYADF+E ++E V ++Y++LL + I+PTL YVQ M+F
Sbjct: 326 ANILERSINGVLNRNALLYFAYADFEEGRLKYEKVHSMYNKLLTLPDIDPTLVYVQYMKF 385
Query: 1117 IRRSEGPNNARLVFKRAREDKRTGYQVFVAAALLEYNCMKDKEVAIRVFKLGLKKYENEP 1296
RR+EG +AR +FK+ARED R+ Y +FVAAAL+EY C KDKE+A R+F+LGLK++ P
Sbjct: 386 ARRAEGIKSARGIFKKAREDVRSRYHIFVAAALMEYYCSKDKEIAFRIFELGLKRFGGSP 445
Query: 1297 EFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFESCVGDLASILKV 1476
E+ + Y D+LS+LNEDNNTRV+FER+L+S L KS+ +W+RFL+FES +GDL+SI+KV
Sbjct: 446 EYVMCYIDYLSHLNEDNNTRVLFERVLSSGGLSPHKSVEVWNRFLEFESNIGDLSSIVKV 505
Query: 1477 EKRRKTAYEEAQKDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNALKG--TESIAGPS 1650
E+RR +E ++ + + LV DRYKF+DL PC+ +LK IGY G + G S
Sbjct: 506 ERRRSAVFENLKEYEGKETAQLV-DRYKFLDLYPCTSTELKSIGYAENVGIILNKVGGAS 564
Query: 1651 FVGSKNVPTHGPQAASAIMGGAGGHAD--------VARYGFPRPDISQMIPFKPRVNCTA 1806
GGA H + A PRPD SQMIPFKPR
Sbjct: 565 -------------------GGANSHNNNNENETDGEATQPLPRPDFSQMIPFKPRSCAHP 605
Query: 1807 SXXXXXXXXXXXXQSVAHLMSLLPPPTCFIGPFINVELLCNMINNMQLPNVSYPKSEDNM 1986
++A L + LPPP F GPF++VELL ++ + LP + + DN
Sbjct: 606 GAHPLAGGVFPQPPALAALCAALPPPNSFRGPFVSVELLFDIFMRLNLPESAPQPNGDND 665
Query: 1987 LGPMLEQDVKKDMYQLLATTSDPSAVVRSSALSDLKRKR------GDSDDE 2121
L P + D+ K ++ ++ T++ V+ S S R+R DSDDE
Sbjct: 666 LTPKI-FDLAKSVHWIVDTSTYTG--VQHSVTSMAPRRRRLLPGGDDSDDE 713