Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F33H1_6
(4158 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17533659|ref|NP_496194.1| HMG-I and HMG-Y DNA-binding domain ... 2279 0.0
gi|39589152|emb|CAE57885.1| Hypothetical protein CBG00931 [Caeno... 800 0.0
gi|39589119|emb|CAE57852.1| Hypothetical protein CBG00889 [Caeno... 147 2e-33
gi|39579933|emb|CAE73859.1| Hypothetical protein CBG21443 [Caeno... 43 0.073
gi|27817830|dbj|BAC55524.2| connectin/titin N2A-PEVK [Mus musculus] 42 0.12
gi|20178478|ref|NP_619899.1| CPXV114 protein [Cowpox virus] >gnl... 40 0.47
gi|30519477|emb|CAD90652.1| J5R protein [Cowpox virus] 39 1.1
gi|50256285|gb|EAL19011.1| hypothetical protein CNBI0240 [Crypto... 39 1.4
gi|48094977|ref|XP_394319.1| similar to developmental transcript... 39 1.4
gi|8919877|emb|CAB96200.1| hypothetical protein [Capsella rubella] 38 1.8
gi|7461073|pir||T28526 hypothetical protein I5R - variola major ... 38 1.8
gi|32423111|ref|XP_331993.1| hypothetical protein [Neurospora cr... 38 2.3
gi|46401993|ref|YP_006736.1| RPXV092 [Rabbitpox virus] >gnl|BL_O... 38 2.3
gi|39581822|emb|CAE60715.1| Hypothetical protein CBG04386 [Caeno... 38 2.3
gi|7519854|pir||F72161 J5R protein - variola minor virus (strain... 38 2.3
gi|37534228|ref|NP_921416.1| hypothetical protein [Oryza sativa ... 37 3.1
gi|46121098|ref|ZP_00173968.2| COG0810: Periplasmic protein TonB... 37 4.0
gi|34865782|ref|XP_346836.1| hypothetical protein XP_346835 [Rat... 37 4.0
gi|4680204|gb|AAD27567.1| hypothetical protein [Sorghum bicolor] 37 4.0
gi|9506427|ref|NP_062019.1| bassoon; bassoon (presynaptic cytoma... 37 4.0
gi|47848387|dbj|BAD22246.1| hydroxyproline-rich glycoprotein-lik... 37 4.0
gi|9627609|ref|NP_042132.1| I5R [Variola virus] >gnl|BL_ORD_ID|1... 37 5.2
gi|9853|emb|CAA35524.1| unnamed protein product [Plasmodium falc... 37 5.2
gi|21554414|gb|AAM63519.1| glycoprotein homolog [Arabidopsis tha... 37 5.2
gi|15235884|ref|NP_193412.1| hydroxyproline-rich glycoprotein fa... 37 5.2
gi|27573359|gb|AAO20077.1| unknown protein [Oryza sativa (japoni... 37 5.2
gi|37532638|ref|NP_920621.1| putative retroelement [Oryza sativa... 37 5.2
gi|38344872|emb|CAE01298.2| OSJNBa0020P07.15 [Oryza sativa (japo... 37 5.2
gi|46437620|gb|EAK96963.1| hypothetical protein CaO19.9736 [Cand... 37 5.2
gi|34911790|ref|NP_917242.1| OJ1159_D09.2 [Oryza sativa (japonic... 37 5.2
gi|50303337|ref|XP_451610.1| RA52_KLULA [Kluyveromyces lactis] >... 37 5.2
gi|28830023|gb|AAO52513.1| hypothetical protein [Dictyostelium d... 37 5.2
gi|102333|pir||S14556 asparagine-rich protein (clone 18C1) - mal... 37 5.2
gi|34913568|ref|NP_918131.1| OSJNBa0086A10.14 [Oryza sativa (jap... 37 5.2
gi|7594584|emb|CAB88077.1| hypothetical protein [Arabidopsis tha... 37 5.2
gi|50590286|ref|ZP_00331685.1| COG0532: Translation initiation f... 36 6.8
gi|9791028|ref|NP_063755.1| late transcription factor [Vaccinia ... 36 6.8
gi|6671648|ref|NP_031593.1| bassoon; presynaptic cytomatrix prot... 36 6.8
gi|49119535|gb|AAH73683.1| Unknown (protein for IMAGE:5572558) [... 36 6.8
gi|17066105|emb|CAD12456.1| Titin [Homo sapiens] 36 6.8
gi|45550734|ref|NP_650019.2| CG14692-PA [Drosophila melanogaster... 36 6.8
gi|50659088|ref|NP_596869.2| titin isoform N2-A; connectin; CMH9... 36 6.8
gi|7512404|pir||I38346 elastic titin - human (fragment) >gnl|BL_... 36 6.8
gi|26006125|dbj|BAC41405.1| mKIAA0257 protein [Mus musculus] 36 8.9
gi|46122529|ref|XP_385818.1| hypothetical protein FG05642.1 [Gib... 36 8.9
gi|46123339|ref|XP_386223.1| hypothetical protein FG06047.1 [Gib... 36 8.9
gi|14599404|emb|CAC43457.1| protease 1 [Pneumocystis carinii] 36 8.9
gi|9256638|ref|NP_061360.1| RW1 protein [Mus musculus] >gnl|BL_O... 36 8.9
gi|42521813|ref|NP_967193.1| TonB-like protein [Bdellovibrio bac... 36 8.9
gi|23507879|ref|NP_700549.1| asparagine-rich antigen [Plasmodium... 36 8.9
gi|48716854|dbj|BAD23551.1| hydroxyproline-rich glycoprotein-lik... 36 8.9
>gi|17533659|ref|NP_496194.1| HMG-I and HMG-Y DNA-binding domain
containing protein (2K469) [Caenorhabditis elegans]
gi|7500418|pir||T21706 hypothetical protein F33H1.4 - Caenorhabditis
elegans
gi|3876594|emb|CAA88699.1| Hypothetical protein F33H1.4
[Caenorhabditis elegans]
Length = 1385
Score = 2279 bits (5905), Expect = 0.0
Identities = 1159/1385 (83%), Positives = 1159/1385 (83%)
Frame = +1
Query: 1 MATLFVLPKLKKANSTGVAHSNPXXXXXXXXXXXXXXXXXQLPTTSHAXXXXXXXXXXXX 180
MATLFVLPKLKKANSTGVAHSNP QLPTTSHA
Sbjct: 1 MATLFVLPKLKKANSTGVAHSNPDSSSDSRRGRGRGTRRSQLPTTSHADEQSEEHEFRED 60
Query: 181 XXXXFLNEDHEDDTLVEGDDRSXXXXXXXXXXXXXXXVTPMAQKRTRGRPPRQRTSSQAQ 360
FLNEDHEDDTLVEGDDRS VTPMAQKRTRGRPPRQRTSSQAQ
Sbjct: 61 EDPEFLNEDHEDDTLVEGDDRSDMDKIKQIQQQKMMIVTPMAQKRTRGRPPRQRTSSQAQ 120
Query: 361 MPDDLMDEELMSQDLLESGPLEGPGSSDRKPAPPVLVGRGSRARNAPKKLNDFVQHHQLA 540
MPDDLMDEELMSQDLLESGPLEGPGSSDRKPAPPVLVGRGSRARNAPKKLNDFVQHHQLA
Sbjct: 121 MPDDLMDEELMSQDLLESGPLEGPGSSDRKPAPPVLVGRGSRARNAPKKLNDFVQHHQLA 180
Query: 541 NKKMQIQEISIPLPLAPNAGIEDNIEPLIPNDAHIEEVRHEVVEKDVVKSVIXXXXXXXX 720
NKKMQIQEISIPLPLAPNAGIEDNIEPLIPNDAHIEEVRHEVVEKDVVKSVI
Sbjct: 181 NKKMQIQEISIPLPLAPNAGIEDNIEPLIPNDAHIEEVRHEVVEKDVVKSVIERDRDEDQ 240
Query: 721 XXXHXXXXXXXXXXXXXXHLANKANSRGRPANPIPPHRRPVPKDLVPPGFPSLKRASSQR 900
H HLANKANSRGRPANPIPPHRRPVPKDLVPPGFPSLKRASSQR
Sbjct: 241 EQEHASVADPAGPPPAPAHLANKANSRGRPANPIPPHRRPVPKDLVPPGFPSLKRASSQR 300
Query: 901 DPTPIKRKDTREVAEKVQESHRDPEPNDAPPSPLSMSEVPIAAHQVEIEDEVVQSGSPID 1080
DPTPIKRKDTREVAEKVQESHRDPEPNDAPPSPLSMSEVPIAAHQVEIEDEVVQSGSPID
Sbjct: 301 DPTPIKRKDTREVAEKVQESHRDPEPNDAPPSPLSMSEVPIAAHQVEIEDEVVQSGSPID 360
Query: 1081 IVTEVESNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVPSTALDATKKKEREAGKDLP 1260
IVTEVESND TVPSTALDATKKKEREAGKDLP
Sbjct: 361 IVTEVESNDGPPPMPPMLLQQQSSQASSSTVPSASQGVTVPSTALDATKKKEREAGKDLP 420
Query: 1261 SEHFPKEKARHVSTRGLHPYVSDKSHIYDVRDQVLIHPEDMEQQEQDAIAQQRVLTLQGG 1440
SEHFPKEKARHVSTRGLHPYVSDKSHIYDVRDQVLIHPEDMEQQEQDAIAQQRVLTLQGG
Sbjct: 421 SEHFPKEKARHVSTRGLHPYVSDKSHIYDVRDQVLIHPEDMEQQEQDAIAQQRVLTLQGG 480
Query: 1441 NFIEDRIGRSDLXXXXXXXXXXSIQPQQYIVEENGMNVVYEVDPNSXXXXXXXXXXXXXX 1620
NFIEDRIGRSDL SIQPQQYIVEENGMNVVYEVDPNS
Sbjct: 481 NFIEDRIGRSDLMEDEEMKMMKSIQPQQYIVEENGMNVVYEVDPNSVIEEEEQVEIQAAE 540
Query: 1621 XXXXXYVMDEHSKQGXXXXXXXXXLPPQLVPEGVPEDAVGDDERDEQSQEKGLAVDEDGN 1800
YVMDEHSKQG LPPQLVPEGVPEDAVGDDERDEQSQEKGLAVDEDGN
Sbjct: 541 QQAEQYVMDEHSKQGEMEDEEDDDLPPQLVPEGVPEDAVGDDERDEQSQEKGLAVDEDGN 600
Query: 1801 FDFNMMDEGEMIRLQSPGGRAHEVRFARDVHGNSVFIDENGHIVELVTDTGALVEPHNXX 1980
FDFNMMDEGEMIRLQSPGGRAHEVRFARDVHGNSVFIDENGHIVELVTDTGALVEPHN
Sbjct: 601 FDFNMMDEGEMIRLQSPGGRAHEVRFARDVHGNSVFIDENGHIVELVTDTGALVEPHNMV 660
Query: 1981 XXXXXXXXXXXXXXDVKNKXXXXXXXXXXXXEVPGGQEGAGPVDRGNLEFSFLDTNNICC 2160
DVKNK EVPGGQEGAGPVDRGNLEFSFLDTNNICC
Sbjct: 661 EQEQQVMQEEVEQEDVKNKQQIRQHQQQQQQEVPGGQEGAGPVDRGNLEFSFLDTNNICC 720
Query: 2161 GLCGEIVVYDKLLTEHLPTAHPEYLSPGVELEEVPYDSWLKTRLKQESKMMENXXXXXXX 2340
GLCGEIVVYDKLLTEHLPTAHPEYLSPGVELEEVPYDSWLKTRLKQESKMMEN
Sbjct: 721 GLCGEIVVYDKLLTEHLPTAHPEYLSPGVELEEVPYDSWLKTRLKQESKMMENGFRHYDD 780
Query: 2341 XXXXXXXXAVRLYSKGIRQMRKVSQIRVNVNEMTLPQLEVALKRKLVEKMGRKVPVSLVD 2520
AVRLYSKGIRQMRKVSQIRVNVNEMTLPQLEVALKRKLVEKMGRKVPVSLVD
Sbjct: 781 HDGGGFGGAVRLYSKGIRQMRKVSQIRVNVNEMTLPQLEVALKRKLVEKMGRKVPVSLVD 840
Query: 2521 RLHARCDICQAVVSLNKKFEVIHLVRHFNAWHPAEHRCSQDWRDPGXXXXXXXXXXXXXX 2700
RLHARCDICQAVVSLNKKFEVIHLVRHFNAWHPAEHRCSQDWRDPG
Sbjct: 841 RLHARCDICQAVVSLNKKFEVIHLVRHFNAWHPAEHRCSQDWRDPGSATTSTSRRPLSLS 900
Query: 2701 DFSVVSTESADQNNLQCIWCGMMMDRSALGMHFSEVHAQQIAVPNCSLCLQEMVMTARLM 2880
DFSVVSTESADQNNLQCIWCGMMMDRSALGMHFSEVHAQQIAVPNCSLCLQEMVMTARLM
Sbjct: 901 DFSVVSTESADQNNLQCIWCGMMMDRSALGMHFSEVHAQQIAVPNCSLCLQEMVMTARLM 960
Query: 2881 EKYGEDFGISLPDEFHLQCSKLNAKYSSEKAMDKAIDRHLKRAKPGVDQHDPDDSHEDAE 3060
EKYGEDFGISLPDEFHLQCSKLNAKYSSEKAMDKAIDRHLKRAKPGVDQHDPDDSHEDAE
Sbjct: 961 EKYGEDFGISLPDEFHLQCSKLNAKYSSEKAMDKAIDRHLKRAKPGVDQHDPDDSHEDAE 1020
Query: 3061 AICTTNSQQSFGRRNRLKRKFVKPCFRQICPNNSSYFEPKSACEWKCRLCNRNVYGAVIS 3240
AICTTNSQQSFGRRNRLKRKFVKPCFRQICPNNSSYFEPKSACEWKCRLCNRNVYGAVIS
Sbjct: 1021 AICTTNSQQSFGRRNRLKRKFVKPCFRQICPNNSSYFEPKSACEWKCRLCNRNVYGAVIS 1080
Query: 3241 AGAIKHYKEFHPAETEHMQYELVKARLERIGDGSMEFVHPQLVECLICNLTYALHKPFNI 3420
AGAIKHYKEFHPAETEHMQYELVKARLERIGDGSMEFVHPQLVECLICNLTYALHKPFNI
Sbjct: 1081 AGAIKHYKEFHPAETEHMQYELVKARLERIGDGSMEFVHPQLVECLICNLTYALHKPFNI 1140
Query: 3421 CRAIRHLRLKHPEVMPETAGKPISGAEISETTDLQTTIRRPNIRFGDTITDPIELERFRK 3600
CRAIRHLRLKHPEVMPETAGKPISGAEISETTDLQTTIRRPNIRFGDTITDPIELERFRK
Sbjct: 1141 CRAIRHLRLKHPEVMPETAGKPISGAEISETTDLQTTIRRPNIRFGDTITDPIELERFRK 1200
Query: 3601 DNFDQQFDKVQIVFGIKKNNEPAYILLMENEKMDLKMAQEMAGKVQTEEDTSQESRFDRL 3780
DNFDQQFDKVQIVFGIKKNNEPAYILLMENEKMDLKMAQEMAGKVQTEEDTSQESRFDRL
Sbjct: 1201 DNFDQQFDKVQIVFGIKKNNEPAYILLMENEKMDLKMAQEMAGKVQTEEDTSQESRFDRL 1260
Query: 3781 VGRDETPQFEESEPSTMFREETKPMALEFPQQIXXXXXXXXXXXXXXXXFIPTYDANNPD 3960
VGRDETPQFEESEPSTMFREETKPMALEFPQQI FIPTYDANNPD
Sbjct: 1261 VGRDETPQFEESEPSTMFREETKPMALEFPQQIVEEEVEEMEEVPVETEFIPTYDANNPD 1320
Query: 3961 HVLIDENEIMNDGNYEMIQEGEYQEIEEDRTVRYLTEDEIREAQARGXXXXXXXXXXXXX 4140
HVLIDENEIMNDGNYEMIQEGEYQEIEEDRTVRYLTEDEIREAQARG
Sbjct: 1321 HVLIDENEIMNDGNYEMIQEGEYQEIEEDRTVRYLTEDEIREAQARGEILEFEEGEYVEE 1380
Query: 4141 YAVQQ 4155
YAVQQ
Sbjct: 1381 YAVQQ 1385
>gi|39589152|emb|CAE57885.1| Hypothetical protein CBG00931
[Caenorhabditis briggsae]
Length = 1041
Score = 800 bits (2066), Expect = 0.0
Identities = 423/664 (63%), Positives = 472/664 (70%), Gaps = 97/664 (14%)
Frame = +1
Query: 2119 NLEF----SFLDTNNICCGLCGEIVVYDKLLTEHLPTAHPEYLSPGVELEEVPYDSWLKT 2286
N+EF SFLDTN +CCGLCGEIV YDKLLTEHLP AHPEY S ++LEE+PY SWLK
Sbjct: 16 NVEFINSCSFLDTNQVCCGLCGEIVDYDKLLTEHLPHAHPEYQSQEMQLEEIPYTSWLKD 75
Query: 2287 RLKQESKMMENXXXXXXX------XXXXXXXXAVRLYSKGIRQMRKVSQIRVNVNEMTLP 2448
RLK+ESK +EN A RLY++ +RQMRKVSQIRVNVNEM++
Sbjct: 76 RLKRESKFLENGFRNYDDPHQHQIGSSAGFGGAPRLYTRNLRQMRKVSQIRVNVNEMSMS 135
Query: 2449 QLEVALKRKLVEKMGRKVPVSLVDRLHARCDICQAVVSLNKKFEVIHLVRHFNAWHPAEH 2628
QLE ALKRKL+EKMGRKVPVSLVDRLHARCDICQAVVSLNKKFEVIHLVRHFNAWHPAEH
Sbjct: 136 QLETALKRKLIEKMGRKVPVSLVDRLHARCDICQAVVSLNKKFEVIHLVRHFNAWHPAEH 195
Query: 2629 RCSQDWRDPGXXXXXXXXXXXXXXDFSVVSTESADQNNLQCIWCGMMMDRSALGMHFSEV 2808
RCSQ+W++ DF+VVSTE+ DQNNLQCIWCGM MDR+ALGMHFSE+
Sbjct: 196 RCSQEWKEVAALPNPGARHPLSLHDFAVVSTET-DQNNLQCIWCGMFMDRAALGMHFSEI 254
Query: 2809 HAQQ---------------------------IAVPNCSLCLQEMVMTARLMEKYGEDFGI 2907
H QQ I VPNCSLCLQEMVMTAR MEKYG+DFGI
Sbjct: 255 HTQQHFFSGFLTSFRFLAHLEAEIWSFEVLEIIVPNCSLCLQEMVMTARFMEKYGKDFGI 314
Query: 2908 SLPDEFHLQCSKLNAKYSSEKAMDKAIDRHLKR--AKPGVDQHDPD----DSHEDAEAIC 3069
SLPDEFHLQ SKL AKYSSEKAMDKAI++HLKR K G DQ D D +D + I
Sbjct: 315 SLPDEFHLQSSKLGAKYSSEKAMDKAIEKHLKRIAMKGGADQSDGGGGGIDDDDDDQTIS 374
Query: 3070 TTNSQQSFGRRNRLKRKFVKPCFRQICPNNSSYFEPKSACEWKCRLCNRNVYGAVISAGA 3249
TNSQQSFGRRNRLKRKFVKPCFRQ+CP NS +FEPKSACEW+CRLCNR VY AVISAGA
Sbjct: 375 ITNSQQSFGRRNRLKRKFVKPCFRQVCPPNSEFFEPKSACEWRCRLCNRFVYAAVISAGA 434
Query: 3250 IKHYKEFHPAETEHMQYELVK--------------------------------------- 3312
IKH+KEFHPAE + MQYELVK
Sbjct: 435 IKHFKEFHPAEIDKMQYELVKYVSVQKRANLDYVEPRYSYKLARLFQLFSTKLYTFLSEF 494
Query: 3313 -ARLERIGDGSMEFVHPQLVECLICNLTYALHKPFNICRAIRHLRLKHPEVMPETAGKPI 3489
ARLERIGDGSMEFVHPQLVECLICNLTYALHKPFNICRAIRHLRLKHPEVMPET+GK I
Sbjct: 495 QARLERIGDGSMEFVHPQLVECLICNLTYALHKPFNICRAIRHLRLKHPEVMPETSGKSI 554
Query: 3490 SGAEISETTDLQTTI--------------RRPNIRFGDTITDPIELERFRKDNFDQQFDK 3627
SGAEI+ET +L+ + +RPNIRFGD ITDPIELE+FRK+N+DQQFDK
Sbjct: 555 SGAEIAETVNLKAPVMTNPSTASTAAAAKKRPNIRFGDCITDPIELEKFRKENWDQQFDK 614
Query: 3628 VQIVFGIKKNNEPAYILLMENEKMDLKMAQEMAGKVQTEEDTSQESRFDRLVGRDETPQF 3807
VQ+V+GIKKN+EPA+ILLM+NE+MD K A EMA K Q + S RL E P+
Sbjct: 615 VQVVYGIKKNDEPAFILLMDNEQMDEKTAMEMAEKEQENGKNLRISESQRL-RISEVPES 673
Query: 3808 EESE 3819
+ES+
Sbjct: 674 QESQ 677