Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F37C12_14
(1305 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|25144570|ref|NP_741217.1| autoantigen like (48.0 kD) (3I286) ... 760 0.0
gi|7500713|pir||T28842 hypothetical protein F37C12.13 - Caenorha... 735 0.0
gi|39594042|emb|CAE70152.1| Hypothetical protein CBG16619 [Caeno... 612 e-174
gi|47213776|emb|CAF92665.1| unnamed protein product [Tetraodon n... 224 3e-57
gi|49114791|gb|AAH72749.1| Unknown (protein for MGC:79114) [Xeno... 218 2e-55
gi|9506981|ref|NP_062266.1| exosome component 9; polymyositis/sc... 215 2e-54
gi|12847890|dbj|BAB27749.1| unnamed protein product [Mus musculus] 215 2e-54
gi|34856829|ref|XP_215550.2| similar to polymyositis scleroderma... 213 6e-54
gi|50593178|gb|AAT79383.1| polymyositis/scleroderma autoantigen ... 213 8e-54
gi|28172868|emb|CAD56889.1| polymyositis/scleroderma autoantigen... 212 1e-53
gi|28172864|emb|CAD44530.1| polymyositis/scleroderma autoantigen... 212 1e-53
gi|14285675|sp|Q06265|RR45_HUMAN Exosome complex exonuclease RRP... 195 2e-48
gi|19075183|ref|NP_587683.1| putative exosome 3'-5' exoribonucle... 187 5e-46
gi|50305471|ref|XP_452695.1| unnamed protein product [Kluyveromy... 181 3e-44
gi|31207299|ref|XP_312616.1| ENSANGP00000015425 [Anopheles gambi... 180 6e-44
gi|45184700|ref|NP_982418.1| AAL124Wp [Eremothecium gossypii] >g... 177 5e-43
gi|21536581|gb|AAM60913.1| nucleolar autoantigen-like protein [A... 176 1e-42
gi|18399822|ref|NP_566441.1| 3' exoribonuclease family protein [... 176 1e-42
gi|50725756|dbj|BAD33267.1| putative polymyositis/scleroderma au... 175 2e-42
gi|15232342|ref|NP_191609.1| 3' exoribonuclease family protein [... 175 2e-42
gi|6320486|ref|NP_010566.1| Ribosomal RNA Processing; Rrp45p [Sa... 172 1e-41
gi|50259145|gb|EAL21822.1| hypothetical protein CNBC5230 [Crypto... 171 4e-41
gi|50290581|ref|XP_447723.1| unnamed protein product [Candida gl... 169 2e-40
gi|49097576|ref|XP_410248.1| hypothetical protein AN6111.2 [Aspe... 166 1e-39
gi|7513248|pir||G01425 nucleolar 75K autoantigen PM-Scl - human ... 159 1e-37
gi|4826922|ref|NP_005024.1| exosome component 9; polymyositis/sc... 159 1e-37
gi|32403614|ref|XP_322420.1| hypothetical protein [Neurospora cr... 157 7e-37
gi|46122263|ref|XP_385685.1| hypothetical protein FG05509.1 [Gib... 156 9e-37
gi|50546251|ref|XP_500645.1| hypothetical protein [Yarrowia lipo... 156 1e-36
gi|50415084|ref|XP_457450.1| unnamed protein product [Debaryomyc... 155 2e-36
gi|38099134|gb|EAA46517.1| hypothetical protein MG08860.4 [Magna... 149 1e-34
gi|24642649|ref|NP_573163.1| CG9606-PA [Drosophila melanogaster]... 148 3e-34
gi|23483275|gb|EAA18999.1| similar to S. cerevisiae RRP45, putat... 137 6e-31
gi|49068608|ref|XP_398593.1| hypothetical protein UM00978.1 [Ust... 127 4e-28
gi|31415882|ref|NP_852480.1| exosome component 8; Opa-interactin... 120 7e-26
gi|46229803|gb|EAK90621.1| RRP45-like archaeo-eukaryotic exosoma... 119 2e-25
gi|18977939|ref|NP_579296.1| hypothetical protein PF1567 [Pyroco... 117 8e-25
gi|14591332|ref|NP_143410.1| autoantigen like protein [Pyrococcu... 116 1e-24
gi|2815604|gb|AAC39558.1| Opa-interacting protein OIP2 [Homo sap... 115 3e-24
gi|27371055|gb|AAH41271.1| MGC52847 protein [Xenopus laevis] 114 5e-24
gi|14520827|ref|NP_126302.1| polyribonucleotide nucleotidyltrans... 114 5e-24
gi|20093818|ref|NP_613665.1| Predicted exosome subunit, predicte... 113 9e-24
gi|23619566|ref|NP_705528.1| exosome complex exonuclease, putati... 113 9e-24
gi|27690954|ref|XP_215566.1| similar to Exosome complex exonucle... 112 1e-23
gi|47227071|emb|CAG00433.1| unnamed protein product [Tetraodon n... 112 2e-23
gi|46435645|gb|EAK95022.1| hypothetical protein CaO19.11559 [Can... 112 3e-23
gi|21759414|sp|Q9D753|RR43_MOUSE Exosome complex exonuclease RRP... 111 3e-23
gi|45595709|gb|AAH67250.1| Exosc8 protein [Mus musculus] 111 3e-23
gi|15678709|ref|NP_275825.1| conserved protein [Methanothermobac... 111 4e-23
gi|48853121|ref|ZP_00307302.1| COG2123: RNase PH-related exoribo... 111 4e-23
gi|40254486|ref|NP_081424.2| CBP-interacting protein 3 [Mus musc... 109 1e-22
gi|50838810|ref|NP_001002865.1| exosome component 8; Opa-interac... 109 2e-22
gi|50730945|ref|XP_417092.1| PREDICTED: similar to Exosome compl... 109 2e-22
gi|25144573|ref|NP_741218.1| putative cytoplasmic protein (3I286... 108 2e-22
gi|20090627|ref|NP_616702.1| tRNA nucleotidyltransferase [Methan... 105 2e-21
gi|48477465|ref|YP_023171.1| ribonuclease PH [Picrophilus torrid... 100 8e-20
gi|21228726|ref|NP_634648.1| Ribonuclease [Methanosarcina mazei ... 100 1e-19
gi|15920654|ref|NP_376323.1| 275aa long conserved hypothetical p... 99 2e-19
gi|46142151|ref|ZP_00204177.1| COG2123: RNase PH-related exoribo... 99 2e-19
gi|11498105|ref|NP_069330.1| conserved hypothetical protein [Arc... 99 3e-19
gi|48837579|ref|ZP_00294552.1| COG2123: RNase PH-related exoribo... 99 3e-19
gi|31239481|ref|XP_320154.1| ENSANGP00000011759 [Anopheles gambi... 97 6e-19
gi|16082607|ref|NP_394748.1| RNase PH-related exoribonuclease [T... 97 8e-19
gi|13541139|ref|NP_110827.1| RNase PH-related exoribonuclease [T... 95 3e-18
gi|14250910|emb|CAC39260.1| Rrp45p homologue [Trypanosoma brucei] 93 2e-17
gi|10640638|emb|CAC12416.1| rRNA processing protein (yeast RRP45... 93 2e-17
gi|15218985|ref|NP_176216.1| 3' exoribonuclease family domain 1-... 92 3e-17
gi|18313177|ref|NP_559844.1| 3' exoribonuclease family protein [... 91 5e-17
gi|14601411|ref|NP_147948.1| autoantigen [Aeropyrum pernix K1] >... 90 1e-16
gi|50418038|gb|AAH77415.1| Unknown (protein for MGC:81766) [Xeno... 89 2e-16
gi|31205025|ref|XP_311461.1| ENSANGP00000023686 [Anopheles gambi... 88 4e-16
gi|28573444|ref|NP_725517.2| CG8395-PA [Drosophila melanogaster]... 88 5e-16
gi|15897635|ref|NP_342240.1| Conserved hypothetical protein [Sul... 85 3e-15
gi|50732870|ref|XP_418803.1| PREDICTED: similar to Exosome compl... 84 1e-14
gi|473949|dbj|BAA06226.1| KIAA0116 [Homo sapiens] 78 4e-13
gi|24307981|ref|NP_055819.1| exosome component 7 [Homo sapiens] ... 78 4e-13
gi|28548933|ref|XP_284543.1| RIKEN cDNA 2610002K22 [Mus musculus] 75 3e-12
gi|34866707|ref|XP_236745.2| similar to Exosome complex exonucle... 75 3e-12
gi|30962875|gb|AAH52656.1| Exosc7 protein [Mus musculus] 75 4e-12
gi|49078716|ref|XP_403083.1| hypothetical protein UM05468.1 [Ust... 74 6e-12
gi|37359778|dbj|BAC97867.1| mKIAA0116 protein [Mus musculus] 74 8e-12
gi|21362905|sp|Q9D0M0|RR42_MOUSE Exosome complex exonuclease RRP... 74 8e-12
gi|6466958|gb|AAF13093.1| hypothetical protein [Arabidopsis thal... 74 1e-11
gi|18398046|ref|NP_566318.1| 3' exoribonuclease family domain 1-... 72 2e-11
gi|6648187|gb|AAF21185.1| putative 3' exoribonuclease [Arabidops... 70 1e-10
gi|19113177|ref|NP_596385.1| putative exoribonuclease [Schizosac... 69 2e-10
gi|31195075|ref|XP_306485.1| ENSANGP00000022777 [Anopheles gambi... 69 2e-10
gi|50260385|gb|EAL23044.1| hypothetical protein CNBA8110 [Crypto... 69 2e-10
gi|48102202|ref|XP_395303.1| similar to Exosome complex exonucle... 69 3e-10
gi|19074289|ref|NP_585795.1| similarity to HYPOTHETICAL PROTEIN ... 65 3e-09
gi|23490177|gb|EAA22017.1| 3' exoribonuclease family, domain 1, ... 57 1e-06
gi|7500225|pir||T21601 hypothetical protein F31D4.1 - Caenorhabd... 55 5e-06
gi|32566065|ref|NP_508024.2| 3' exoribonuclease (33.9 kD) (5V311... 54 6e-06
gi|29245083|gb|EAA36744.1| GLP_83_5565_6509 [Giardia lamblia ATC... 54 1e-05
gi|22797842|emb|CAD23610.1| exosome-associated protein 2 [Trypan... 54 1e-05
gi|7486259|pir||T08941 hypothetical protein F27G19.90 - Arabidop... 50 1e-04
gi|47208122|emb|CAF91040.1| unnamed protein product [Tetraodon n... 50 2e-04
gi|23619336|ref|NP_705298.1| exoribonuclease PH, putative [Plasm... 49 3e-04
gi|41614907|ref|NP_963405.1| NEQ111 [Nanoarchaeum equitans Kin4-... 49 3e-04
gi|19705156|ref|NP_602651.1| Ribonuclease PH; nucleoside-triphos... 38 0.46
gi|46229700|gb|EAK90518.1| RPR45-like archaeo-eukaryotic exosoma... 38 0.60
gi|42567185|ref|NP_194479.2| 3' exoribonuclease family domain 1-... 37 1.3
gi|47094757|ref|ZP_00232372.1| conserved hypothetical protein [L... 36 1.8
gi|46906768|ref|YP_013157.1| conserved hypothetical protein [Lis... 36 1.8
gi|47094319|ref|ZP_00232020.1| conserved hypothetical protein [L... 36 1.8
gi|29653650|ref|NP_819342.1| ribonuclease PH [Coxiella burnetii ... 36 2.3
gi|15897636|ref|NP_342241.1| Ribonuclease PH (rph) [Sulfolobus s... 35 3.0
gi|26452638|dbj|BAC43402.1| unknown protein [Arabidopsis thaliana] 35 3.0
gi|34763588|ref|ZP_00144521.1| RIBONUCLEASE PH; NUCLEOSIDE-TRIPH... 35 3.0
gi|46128401|ref|XP_388754.1| hypothetical protein FG08578.1 [Gib... 35 3.0
gi|49067570|ref|XP_398075.1| hypothetical protein UM00460.1 [Ust... 35 5.1
gi|16802566|ref|NP_464051.1| similar to B. subtilis YybC protein... 35 5.1
gi|15920655|ref|NP_376324.1| 247aa long hypothetical ribonucleas... 35 5.1
gi|39590214|emb|CAE65952.1| Hypothetical protein CBG11133 [Caeno... 34 6.7
gi|38100283|gb|EAA47431.1| hypothetical protein MG02674.4 [Magna... 34 6.7
gi|48477362|ref|YP_023068.1| hypothetical membrane associated pr... 34 6.7
gi|16799603|ref|NP_469871.1| similar to B. subtilis YybC protein... 34 8.7
>gi|25144570|ref|NP_741217.1| autoantigen like (48.0 kD) (3I286)
[Caenorhabditis elegans]
gi|14625162|gb|AAC48298.2| Hypothetical protein F37C12.13a
[Caenorhabditis elegans]
Length = 434
Score = 760 bits (1963), Expect = 0.0
Identities = 398/428 (92%), Positives = 398/428 (92%)
Frame = -1
Query: 1305 MRVQPVTNCEKAVILEALKIGKRFDFRSLEEFRDVKLVVGAEVGTAICTIGNTKVMAAVS 1126
MRVQPVTNCEKAVILEALKIGKRFDFRSLEEFRDVKLVVGAEVGTAICTIGNTKVMAAVS
Sbjct: 1 MRVQPVTNCEKAVILEALKIGKRFDFRSLEEFRDVKLVVGAEVGTAICTIGNTKVMAAVS 60
Query: 1125 AEIAEPSSMRPHKGVINIDVDLSPMANYANEHDRLGSKGMXXXXXXXXXXRDSRCIDVEA 946
AEIAEPSSMRPHKGVINIDVDLSPMANYANEHDRLGSKGM RDSRCIDVEA
Sbjct: 61 AEIAEPSSMRPHKGVINIDVDLSPMANYANEHDRLGSKGMELIRLLELIIRDSRCIDVEA 120
Query: 945 LCIRAGKEIWKIRVDVRILDEDGSLLDCACLAAITALQHFRRPNVTLEPHHTLIYSEYEK 766
LCIRAGKEIWKIRVDVRILDEDGSLLDCACLAAITALQHFRRPNVTLEPHHTLIYSEYEK
Sbjct: 121 LCIRAGKEIWKIRVDVRILDEDGSLLDCACLAAITALQHFRRPNVTLEPHHTLIYSEYEK 180
Query: 765 APVPLNIYHMPICTTIGLLDKGQIVVIDPTDKETACLDGSIVVACNKRREVCALHQSTNL 586
APVPLNIYHMPICTTIGLLDKGQIVVIDPTDKETACLDGSIVVACNKRREVCALHQSTNL
Sbjct: 181 APVPLNIYHMPICTTIGLLDKGQIVVIDPTDKETACLDGSIVVACNKRREVCALHQSTNL 240
Query: 585 ILSTKQIERCVKLAMARAEALTAVVSDVIKQDQIERSAFKRPDGFAITTPSLILTAGTTA 406
ILSTKQIERCVKLAMARAEALTAVVSDVIKQDQIERSAFKRPDGFAITTPSLILTAGTTA
Sbjct: 241 ILSTKQIERCVKLAMARAEALTAVVSDVIKQDQIERSAFKRPDGFAITTPSLILTAGTTA 300
Query: 405 SRQIRAPVIKTEPESFTQRSLYQPSVILNENPLSVGSVKQEDVDEETLLAEQLTTIQNSV 226
SRQIRAPVIKTEPESFTQRSLYQPSVILNENPLSVGSVKQEDVDEETLLAEQLTTIQNSV
Sbjct: 301 SRQIRAPVIKTEPESFTQRSLYQPSVILNENPLSVGSVKQEDVDEETLLAEQLTTIQNSV 360
Query: 225 GQVEVTEKQTVAVSSRKRXXXXXXXXXXXXXXXXXXXXVQTMTLGSETVLNDVPMEEAPD 46
GQVEVTEKQTVAVSSRKR VQTMTLGSETVLNDVPMEEAPD
Sbjct: 361 GQVEVTEKQTVAVSSRKREVEEVNDLLDGLDDDDEEEEVQTMTLGSETVLNDVPMEEAPD 420
Query: 45 AEDSLVNA 22
AEDSLVNA
Sbjct: 421 AEDSLVNA 428
>gi|7500713|pir||T28842 hypothetical protein F37C12.13 -
Caenorhabditis elegans
Length = 617
Score = 735 bits (1897), Expect = 0.0
Identities = 388/428 (90%), Positives = 388/428 (90%)
Frame = -1
Query: 1305 MRVQPVTNCEKAVILEALKIGKRFDFRSLEEFRDVKLVVGAEVGTAICTIGNTKVMAAVS 1126
MRVQPVTNCEKA RFDFRSLEEFRDVKLVVGAEVGTAICTIGNTKVMAAVS
Sbjct: 1 MRVQPVTNCEKA----------RFDFRSLEEFRDVKLVVGAEVGTAICTIGNTKVMAAVS 50
Query: 1125 AEIAEPSSMRPHKGVINIDVDLSPMANYANEHDRLGSKGMXXXXXXXXXXRDSRCIDVEA 946
AEIAEPSSMRPHKGVINIDVDLSPMANYANEHDRLGSKGM RDSRCIDVEA
Sbjct: 51 AEIAEPSSMRPHKGVINIDVDLSPMANYANEHDRLGSKGMELIRLLELIIRDSRCIDVEA 110
Query: 945 LCIRAGKEIWKIRVDVRILDEDGSLLDCACLAAITALQHFRRPNVTLEPHHTLIYSEYEK 766
LCIRAGKEIWKIRVDVRILDEDGSLLDCACLAAITALQHFRRPNVTLEPHHTLIYSEYEK
Sbjct: 111 LCIRAGKEIWKIRVDVRILDEDGSLLDCACLAAITALQHFRRPNVTLEPHHTLIYSEYEK 170
Query: 765 APVPLNIYHMPICTTIGLLDKGQIVVIDPTDKETACLDGSIVVACNKRREVCALHQSTNL 586
APVPLNIYHMPICTTIGLLDKGQIVVIDPTDKETACLDGSIVVACNKRREVCALHQSTNL
Sbjct: 171 APVPLNIYHMPICTTIGLLDKGQIVVIDPTDKETACLDGSIVVACNKRREVCALHQSTNL 230
Query: 585 ILSTKQIERCVKLAMARAEALTAVVSDVIKQDQIERSAFKRPDGFAITTPSLILTAGTTA 406
ILSTKQIERCVKLAMARAEALTAVVSDVIKQDQIERSAFKRPDGFAITTPSLILTAGTTA
Sbjct: 231 ILSTKQIERCVKLAMARAEALTAVVSDVIKQDQIERSAFKRPDGFAITTPSLILTAGTTA 290
Query: 405 SRQIRAPVIKTEPESFTQRSLYQPSVILNENPLSVGSVKQEDVDEETLLAEQLTTIQNSV 226
SRQIRAPVIKTEPESFTQRSLYQPSVILNENPLSVGSVKQEDVDEETLLAEQLTTIQNSV
Sbjct: 291 SRQIRAPVIKTEPESFTQRSLYQPSVILNENPLSVGSVKQEDVDEETLLAEQLTTIQNSV 350
Query: 225 GQVEVTEKQTVAVSSRKRXXXXXXXXXXXXXXXXXXXXVQTMTLGSETVLNDVPMEEAPD 46
GQVEVTEKQTVAVSSRKR VQTMTLGSETVLNDVPMEEAPD
Sbjct: 351 GQVEVTEKQTVAVSSRKREVEEVNDLLDGLDDDDEEEEVQTMTLGSETVLNDVPMEEAPD 410
Query: 45 AEDSLVNA 22
AEDSLVNA
Sbjct: 411 AEDSLVNA 418