Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F44D12_2
(1029 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17540422|ref|NP_501806.1| putative membrane protein (4K780) [... 706 0.0
gi|39585743|emb|CAE59945.1| Hypothetical protein CBG03432 [Caeno... 622 e-177
gi|25396111|pir||B88798 protein F44D12.2 [imported] - Caenorhabd... 317 2e-85
gi|39583896|emb|CAE63986.1| Hypothetical protein CBG08578 [Caeno... 96 1e-18
gi|17557996|ref|NP_506188.1| putative protein family member, wit... 96 1e-18
gi|17560186|ref|NP_506336.1| TGF-beta receptor/activin receptor,... 69 2e-10
gi|17560190|ref|NP_506337.1| TGF-beta receptor/activin receptor,... 57 5e-07
gi|17558400|ref|NP_506265.1| TGF-beta receptor/activin receptor,... 49 2e-04
gi|7496976|pir||T19691 hypothetical protein C34B4.2 - Caenorhabd... 49 2e-04
gi|39589543|emb|CAE66778.1| Hypothetical protein CBG12135 [Caeno... 45 0.003
gi|49035162|gb|AAB66091.3| Hypothetical protein F36H9.1 [Caenorh... 44 0.006
gi|39582123|emb|CAE60800.1| Hypothetical protein CBG04492 [Caeno... 42 0.017
gi|17560672|ref|NP_503505.1| TGF-beta receptor/activin receptor,... 41 0.051
gi|39592973|emb|CAE62587.1| Hypothetical protein CBG06701 [Caeno... 41 0.051
gi|7496977|pir||T19693 hypothetical protein C34B7.1 - Caenorhabd... 40 0.066
gi|17505843|ref|NP_492264.1| putative secreted or extracellular ... 40 0.066
gi|17509613|ref|NP_493361.1| putative protein, with a transmembr... 40 0.11
gi|25395354|pir||A87990 protein W05H12.1 [imported] - Caenorhabd... 40 0.11
gi|39592454|emb|CAE63531.1| Hypothetical protein CBG08011 [Caeno... 40 0.11
gi|39587868|emb|CAE67886.1| Hypothetical protein CBG13481 [Caeno... 39 0.15
gi|50079992|emb|CAH03729.1| glycoprotein follicle-stimulating ho... 39 0.25
gi|164464|gb|AAA31039.1| follicle stimulating hormone beta-subunit 38 0.33
gi|17536011|ref|NP_494791.1| putative protein, with a transmembr... 38 0.33
gi|47523108|ref|NP_999040.1| follicle stimulating hormone beta-s... 38 0.33
gi|14194750|sp|Q9JK69|FSHB_CAVPO Follitropin beta chain precurso... 38 0.43
gi|47680443|gb|AAT37166.1| follicle-stimulating hormone beta sub... 38 0.43
gi|39596986|emb|CAE59213.1| Hypothetical protein CBG02526 [Caeno... 38 0.43
gi|7500687|pir||T32006 hypothetical protein F36H9.1 - Caenorhabd... 37 0.73
gi|4503791|ref|NP_000501.1| follicle stimulating hormone, beta p... 37 0.73
gi|12644092|sp|P01226|FSHB_HORSE Follitropin beta chain precurso... 37 0.96
gi|39596985|emb|CAE59212.1| Hypothetical protein CBG02525 [Caeno... 36 1.3
gi|27806619|ref|NP_776485.1| follicule stimulating hormone, beta... 36 1.3
gi|120555|sp|P01227|FSHB_SHEEP Follitropin beta chain precursor ... 36 1.3
gi|7506851|pir||T29854 hypothetical protein T01C8.3 - Caenorhabd... 35 2.1
gi|33300295|emb|CAE17736.1| Hypothetical protein D1053.4 [Caenor... 35 2.1
gi|32566566|ref|NP_510706.2| predicted CDS, putative protein (XR... 35 2.1
gi|17646744|gb|AAL41021.1| follicle stimulating hormone beta sub... 35 2.1
gi|46127575|ref|XP_388341.1| predicted protein [Gibberella zeae ... 35 3.6
gi|38193970|gb|AAR13163.1| follicle-stimulating hormone beta sub... 35 3.6
gi|47204514|emb|CAF98952.1| unnamed protein product [Tetraodon n... 34 4.8
gi|47230233|emb|CAG10647.1| unnamed protein product [Tetraodon n... 34 4.8
gi|26891799|gb|AAN84783.1| FSH beta-subunit [Capra hircus] 34 4.8
gi|21914206|gb|AAM81325.1| follicle stimulating hormone beta-sub... 34 4.8
gi|33300051|emb|CAE17846.1| Hypothetical protein F53B7.7 [Caenor... 34 6.2
gi|32470966|ref|NP_863959.1| iron (III) transport system (iron (... 34 6.2
gi|39596257|emb|CAE69895.1| Hypothetical protein CBG16245 [Caeno... 34 6.2
gi|26891797|gb|AAN84782.1| FSH beta-subunit [Cervus nippon] 34 6.2
gi|50424699|ref|XP_460939.1| unnamed protein product [Debaryomyc... 33 8.1
>gi|17540422|ref|NP_501806.1| putative membrane protein (4K780)
[Caenorhabditis elegans]
gi|7503372|pir||T22167 hypothetical protein F44D12.2 - Caenorhabditis
elegans
gi|5824507|emb|CAA92598.2| Hypothetical protein F44D12.2
[Caenorhabditis elegans]
Length = 342
Score = 706 bits (1823), Expect = 0.0
Identities = 329/342 (96%), Positives = 329/342 (96%)
Frame = -1
Query: 1029 MQTILIQLIVLFTLFHEVNTLVTCSRCEFGNEECNFSRSTCRGDFCYHAQYFYGNEMMPT 850
MQTILIQLIVLFTLFHEVNTLVTCSRCEFGNEECNFSRSTCRGDFCYHAQYFYGNEMMPT
Sbjct: 1 MQTILIQLIVLFTLFHEVNTLVTCSRCEFGNEECNFSRSTCRGDFCYHAQYFYGNEMMPT 60
Query: 849 IQKGCVIGEVAPEGCRVNHHGNVMCFCSDADYCNANYTSLADTATTILPVQTCQPEKVNN 670
IQKGCVIGEVAPEGCRVNHHGNVMCFCSDADYCNANYTSLADTATTILPVQTCQPEKVNN
Sbjct: 61 IQKGCVIGEVAPEGCRVNHHGNVMCFCSDADYCNANYTSLADTATTILPVQTCQPEKVNN 120
Query: 669 MPKPRWTKPCAANYCTFIEAKTQTEVNSANYTWSTKDCNKENEFDFFPTLTVFNFYPGTC 490
MPKPRWTKPCAANYCTFIEAKTQTEVNSANYTWSTKDCNKENEFDFFPTLTVFNFYPGTC
Sbjct: 121 MPKPRWTKPCAANYCTFIEAKTQTEVNSANYTWSTKDCNKENEFDFFPTLTVFNFYPGTC 180
Query: 489 VWLNYGGQPDTHACYGSDSXXXXXXXXXXXXXTECHVDYFNPRLPYVKSGSSCIGQFCFI 310
VWLNYGGQPDTHACYGSDS TECHVDYFNPRLPYVKSGSSCIGQFCFI
Sbjct: 181 VWLNYGGQPDTHACYGSDSLDTTLVFDVTTATTECHVDYFNPRLPYVKSGSSCIGQFCFI 240
Query: 309 SATSRGEVFRGCVNSVTVEGATPLKIGYTRAYTGLEQWICDQSYCNADLKSAELSWPPEL 130
SATSRGEVFRGCVNSVTVEGATPLKIGYTRAYTGLEQWICDQSYCNADLKSAELSWPPEL
Sbjct: 241 SATSRGEVFRGCVNSVTVEGATPLKIGYTRAYTGLEQWICDQSYCNADLKSAELSWPPEL 300
Query: 129 YLYRNISNLREFNVFYIDSARSSSSIFLAIPIVFLINYCLFH 4
YLYRNISNLREFNVFYIDSARSSSSIFLAIPIVFLINYCLFH
Sbjct: 301 YLYRNISNLREFNVFYIDSARSSSSIFLAIPIVFLINYCLFH 342